Psyllid ID: psy13815

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH
Secondary Structure (PSIPRED)
ccccccccEEEEcccHHHHHHHHHccccccccccccEEEcccccccccccccccccEEEEccccEEEEEEEEcccccccccccccEEEcccccccccccccccccccccccccccEEEccccccccccccEEEEEEccEEEEEEEEEcccEEEEccccccccccccccccEEEEEcEEEccccccEEEcEEEEEEccccccccccccEEEEEEcccccccccccccccccccccccccEEEEEEcccccccccccccccccccEEEEcccHHHHHHHHHccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEEEEEccccccccccccEEEEccccHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHHcccEEEEEccccccHccccccccccccccccccccccccccccccccccccEEEcccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEccEEccccccccEEEEEccccEEEEEEEEEccEEEEcHHHHcccccHHHcccEEEEEEcEcccccccEEEEEEEEEEccccccccccccEEEEEEccccEccccEEEEEcccccccccccEEEEEEcccccccccccccHHHHEEEEEcEcccHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccEEEEEEEEEEccccccccccEEEEEHHHcHHHHHHHHHcc
Coil and Loop (DISEMBL)
RRSNILQKVALSVVSNQVCQAWYQSegkkinvkesqmcagheqggkdacwadsggplmllgaESTQVIGLVstgigsptSVVQLLTRWTLdlevggsspiagvpcgrslasrrtgkivgglaanpgefpwIVSLkrhgghfcggtiIHEQWIVTAAHclcngpsplsasqINVTlkehdlsrpsistvpvlrimfhpshscssfnnDIALLELTRSiqwsdlirpaclpsgsldyseqsvtvagwgwtnenpsqgrrsnILQKVALSVVSNQVCQAWYQSegkkinvkesqmcagheqggkdacwvsrqwwtphvargrvypshrsgvhwdpplqadsggplmllgAESTQVIGLVSTgigcarprlpglytRLTRYIGWISDTLDIH
Flexible Loop (DISEMBL)
RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDlevggsspiagvpcgrslASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTgigcarprlpglytrltryigwisdtldih
Low Complexity Region (SEG)
RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH
Disordered region (IsUnstruct)
*****LQKVALSVVSNQVCQAWYQSEGKKINVKE*QMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNE*******SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL***
Disordered Region (DISOPRED)
RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS*****TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD**
Disordered Region (DISEMBL)
RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ**********DACWADSGGPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ**********DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH
Disordered Region (DISPRO)
**SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLE*GGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	388	2.2.26 [Sep-21-2011]
Q01177	812	Plasminogen OS=Rattus nor	yes	N/A	0.623	0.298	0.319	4e-36
P06868	812	Plasminogen OS=Bos taurus	no	N/A	0.605	0.289	0.339	5e-36
P00747	810	Plasminogen OS=Homo sapie	yes	N/A	0.585	0.280	0.340	6e-36
Q5R8X6	810	Plasminogen OS=Pongo abel	yes	N/A	0.585	0.280	0.344	1e-35
P81286	343	Plasminogen (Fragment) OS	N/A	N/A	0.579	0.655	0.352	2e-35
Q7Z410	1059	Transmembrane protease se	no	N/A	0.871	0.319	0.265	3e-35
Q90WD8	974	Ovochymase-2 OS=Bufo japo	N/A	N/A	0.644	0.256	0.334	6e-35
P80009	333	Plasminogen (Fragment) OS	yes	N/A	0.585	0.681	0.326	1e-34
P69525	1065	Transmembrane protease se	yes	N/A	0.610	0.222	0.338	1e-34
Q9DBI0	811	Transmembrane protease se	no	N/A	0.600	0.287	0.358	2e-34

>sp|Q01177|PLMN_RAT Plasminogen OS=Rattus norvegicus GN=Plg PE=2 SV=2

 Score =  152 bits (384), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 49/291 (16%)

Query: 100 IAGVPCGRSLASRRT--GKIVGGLAANPGEFPWIVSLKRH--GGHFCGGTIIHEQWIVTA 155
           ++   CG+     +   G++VGG  ANP  +PW +SL+    G HFCGGT+I  +W++TA
Sbjct: 563 LSSFECGKPQVEPKKCPGRVVGGCVANPHSWPWQISLRTRFSGQHFCGGTLISPEWVLTA 622

Query: 156 AHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTR 215
           AHCL     P    ++ +   E  +    +  + V +++  P+ +      DIALL+L+R
Sbjct: 623 AHCLEKSSRP-EFYKVILGAHEERILGSDVQQIAVTKLVLEPNDA------DIALLKLSR 675

Query: 216 SIQWSDLIRPACLPSGSLDYSEQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVC 274
               +D + PACLPS +   +++++  + GWG T   P  GR    L++  L V+ N+VC
Sbjct: 676 PATITDNVIPACLPSPNYVVADRTLCYITGWGETKGTPGAGR----LKEAQLPVIENKVC 731

Query: 275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPL 334
               ++E     VK +++CAGH  GG D+C                              
Sbjct: 732 N---RAEYLNNRVKSTELCAGHLAGGIDSC------------------------------ 758

Query: 335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           Q DSGGPL+    +   + G+ S G+GCARP  PG+Y R++RY+ WI   +
Sbjct: 759 QGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRYVNWIEREM 809

Angiostatin is an angiogenesis inhibitor that blocks neovascularization and growth of experimental primary and metastatic tumors in vivo.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 7

>sp|P06868|PLMN_BOVIN Plasminogen OS=Bos taurus GN=PLG PE=1 SV=2

 Score =  152 bits (383), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 147/286 (51%), Gaps = 51/286 (17%)

Query: 105 CGRSLASRR--TGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNG 162
           CG+     +  +G+IVGG  + P  +PW VSL+R   HFCGGT+I  +W++TAAHCL N 
Sbjct: 570 CGKPKVEPKKCSGRIVGGCVSKPHSWPWQVSLRRSSRHFCGGTLISPKWVLTAAHCLDNI 629

Query: 163 PSPLSASQINVTLKEHD--LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWS 220
              L+ S   V L  H+  +   S+  +PV R+   PS +      DIALL+L+R    +
Sbjct: 630 ---LALSFYKVILGAHNEKVREQSVQEIPVSRLFREPSQA------DIALLKLSRPAIIT 680

Query: 221 DLIRPACLPSGSLDYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
             + PACLP  +   + ++   + GWG T     +G    +L++  L V+ N+VC     
Sbjct: 681 KEVIPACLPPPNYMVAARTECYITGWGETQGTFGEG----LLKEAHLPVIENKVCNRNEY 736

Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
            +G+   VK +++CAGH  GG D+C                              Q DSG
Sbjct: 737 LDGR---VKPTELCAGHLIGGTDSC------------------------------QGDSG 763

Query: 340 GPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           GPL+    +   + G+ S G+GCARP  PG+Y R++ Y+ WI +T+
Sbjct: 764 GPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSPYVPWIEETM 809

Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated by CSPG4. Binds to cells.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

>sp|P00747|PLMN_HUMAN Plasminogen OS=Homo sapiens GN=PLG PE=1 SV=2

 Score =  152 bits (383), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 141/273 (51%), Gaps = 46/273 (16%)

Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 579 GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 638

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 639 AHQEVNL-EPHVQEIEVSRLFLEPTRK------DIALLKLSSPAVITDKVIPACLPSPNY 691

Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 692 VVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 744

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q DSGGPL+    +   +
Sbjct: 745 CAGHLAGGTDSC------------------------------QGDSGGPLVCFEKDKYIL 774

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 775 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 807

Angiostatin is an angiogenesis inhibitor that blocks neovascularization and growth of experimental primary and metastatic tumors in vivo.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

>sp|Q5R8X6|PLMN_PONAB Plasminogen OS=Pongo abelii GN=PLG PE=2 SV=1

 Score =  150 bits (380), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 140/273 (51%), Gaps = 46/273 (16%)

Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  AN   +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 579 GRVVGGCVANAHSWPWQVSLRTRFGTHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 638

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+ +      DIALL+L+     +D + PACLPS + 
Sbjct: 639 AHQEVNL-EPHVQEIEVSRLFLEPTRA------DIALLKLSSPAVITDKVIPACLPSPNY 691

Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             + ++   + GWG T      G    +L++  L V+ N+VC  +    G+   VK +++
Sbjct: 692 VVAGRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VKSTEL 744

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q DSGGPL+    +   +
Sbjct: 745 CAGHLAGGTDSC------------------------------QGDSGGPLVCFEKDKYIL 774

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 775 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 807

Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated by CSPG4. Binds to cells.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

>sp|P81286|PLMN_SHEEP Plasminogen (Fragment) OS=Ovis aries GN=PLG PE=1 SV=1

 Score =  150 bits (379), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 143/275 (52%), Gaps = 50/275 (18%)

Query: 115 GKIVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
            ++VGG  A P  +PW VSL+R    HFCGGT+I  +W++TAAHCL    S L  S   V
Sbjct: 112 ARVVGGCVATPHSWPWQVSLRRRSREHFCGGTLISPEWVLTAAHCL---DSILGPSFYTV 168

Query: 174 TLKEH-DLSR-PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
            L  H +++R  S+  +PV R+   PS +      DIALL+L+     +D + PACLPS 
Sbjct: 169 ILGAHYEMAREASVQEIPVSRLFLEPSRA------DIALLKLSSPAVITDEVIPACLPSP 222

Query: 232 SLDYSEQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
           +   ++++V  + GWG T      GR    L++  L V+ N+VC  +    G+   VK +
Sbjct: 223 NYVVADKTVCYITGWGETQGTFGVGR----LKEARLPVIENKVCNRYEYLNGR---VKST 275

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           ++CAG   GG D+C                              Q DSGGPL+    +  
Sbjct: 276 ELCAGDLAGGTDSC------------------------------QGDSGGPLVCFEKDKY 305

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            + G+ S G+GCARP  PG+Y R++ Y+ WI +T+
Sbjct: 306 ILQGVTSWGLGCARPNKPGVYVRVSTYVPWIEETM 340

Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated by CSPG4. Binds to cells.

Ovis aries (taxid: 9940)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

>sp|Q7Z410|TMPS9_HUMAN Transmembrane protease serine 9 OS=Homo sapiens GN=TMPRSS9 PE=1 SV=2

 Score =  149 bits (376), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 186/441 (42%), Gaps = 103/441 (23%)

Query: 2   RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG 61
           +  +LQK  + ++   +C + Y       ++ +  +CAG+  G  D+C  DSGGPL+   
Sbjct: 341 KPEVLQKATVELLDQALCASLYGH-----SLTDRMVCAGYLDGKVDSCQGDSGGPLVCEE 395

Query: 62  AESTQVI-GLVSTGIGSPTS----VVQLLTR---WTLDLEVGGS---------------- 97
                 + G+VS GIG   +    V   +TR   W L+     S                
Sbjct: 396 PSGRFFLAGIVSWGIGCAEARRPGVYARVTRLRDWILEATTKASMPLAPTMAPAPAAPST 455

Query: 98  -------SPIAGVP----------------------CGRSLASRRTGKIVGGLAANPGEF 128
                  SP+   P                      CG   A  +  ++VGG  A  GE 
Sbjct: 456 AWPTSPESPVVSTPTKSMQALSTVPLDWVTVPKLQECGARPAMEKPTRVVGGFGAASGEV 515

Query: 129 PWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTV 188
           PW VSLK    HFCG T++ ++W+++AAHC  +        Q+   L    L     S V
Sbjct: 516 PWQVSLKEGSRHFCGATVVGDRWLLSAAHCFNH----TKVEQVRAHLGTASLLGLGGSPV 571

Query: 189 PV--LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSE-QSVTVAGW 245
            +   R++ HP ++    + D+A+LEL   + ++  I+P CLP     +   +   ++GW
Sbjct: 572 KIGLRRVVLHPLYNPGILDFDLAVLELASPLAFNKYIQPVCLPLAIQKFPVGRKCMISGW 631

Query: 246 GWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACW 305
           G T E      +  +LQK ++ ++  + C   Y       ++ +  +CAG  +G  D+C 
Sbjct: 632 GNTQEG--NATKPELLQKASVGIIDQKTCSVLY-----NFSLTDRMICAGFLEGKVDSC- 683

Query: 306 VSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI-GLVSTGIGCAR 364
                                        Q DSGGPL    A     + G+VS GIGCA+
Sbjct: 684 -----------------------------QGDSGGPLACEEAPGVFYLAGIVSWGIGCAQ 714

Query: 365 PRLPGLYTRLTRYIGWISDTL 385
            + PG+YTR+TR  GWI + +
Sbjct: 715 VKKPGVYTRITRLKGWILEIM 735

Serase-1 and serase-2 are serine proteases that hydrolyze the peptides N-t-Boc-Gln-Ala-Arg-AMC and N-t-Boc-Gln-Gly-Arg-AMC. In contrast, N-t-Boc-Ala-Phe-Lys-AMC and N-t-Boc-Ala-Pro-Ala-AMC are not significantly hydrolyzed.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|Q90WD8|OVCH2_BUFJA Ovochymase-2 OS=Bufo japonicus GN=OVCH2 PE=1 SV=1

 Score =  148 bits (374), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 154/308 (50%), Gaps = 58/308 (18%)

Query: 96  GSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTA 155
           G  P A       L SR    IVGG +A  GE PW+VSLKR G HFCGGTII +++++TA
Sbjct: 33  GERPAANTSVSYGLLSR----IVGGTSAVKGESPWMVSLKRDGKHFCGGTIISDKYVLTA 88

Query: 156 AHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIMFHPSHSCSS-FNNDIALLE 212
           AHC+          Q++V++ +HD +    S     +  +  HP+   S  FN D+A+LE
Sbjct: 89  AHCVLEKNFEF---QVSVSIGDHDFAVYERSEQRFAIKSVFKHPNFKPSRPFNYDLAILE 145

Query: 213 LTRSIQWSDLIRPACLPSGSLDYSEQSVTVA-GWGWTNENPSQGRRSNILQKVALSVVSN 271
           L  SI +   I+PACLPS    +   ++ +A GWG   EN   GR  + LQKV L ++  
Sbjct: 146 LVESITFDKDIQPACLPSPDDVFPTGTLCMALGWGRLQEN---GRLPSSLQKVVLPLIEY 202

Query: 272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWD 331
           + C +  ++  +++   E+ +CAG  +GGKDAC                           
Sbjct: 203 RRCLSIMETVDRRLAF-ETVVCAGFPEGGKDAC--------------------------- 234

Query: 332 PPLQADSGGPLMLLGAESTQV-IGLVSTGIGCAR------------PRLPGLYTRLTRYI 378
              Q DSGGP +   ++   V +G+ S G+GCAR               PG++T + R +
Sbjct: 235 ---QGDSGGPFLCQRSQGRWVLVGVTSWGLGCARKWADNILDPVESKGSPGVFTDIQRLL 291

Query: 379 GWISDTLD 386
            W+S+ L+
Sbjct: 292 NWLSENLN 299

Mediates gamete interaction by affecting the vitelline coat.

Bufo japonicus (taxid: 8387)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 2

EC: 0

>sp|P80009|PLMN_CANFA Plasminogen (Fragment) OS=Canis familiaris GN=PLG PE=1 SV=1

 Score =  147 bits (372), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 140/273 (51%), Gaps = 46/273 (16%)

Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  ANP  +PW +SL+ R+G HFCGGT+I  +W++TAAHCL     P S   I  
Sbjct: 102 GRVVGGCVANPHSWPWQISLRTRYGKHFCGGTLISPEWVLTAAHCLERSSRPASYKVILG 161

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             KE +L    +  + V ++   P+ +      DIALL+L+     +  + PACLP  + 
Sbjct: 162 AHKEVNLES-DVQEIEVYKLFLEPTRA------DIALLKLSSPAVITSKVIPACLPPPNY 214

Query: 234 DYSEQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             +++++  + GWG T      G    +L++  L V+ N+VC  +    G+   VK +++
Sbjct: 215 VVADRTLCYITGWGETQGTYGAG----LLKEAQLPVIENKVCNRYEYLNGR---VKSTEL 267

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+  GG D+C                              Q DSGGPL+    +   +
Sbjct: 268 CAGNLAGGTDSC------------------------------QGDSGGPLVCFEKDKYIL 297

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 298 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGIM 330

Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated by CSPG4. Binds to cells.

Canis familiaris (taxid: 9615)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

>sp|P69525|TMPS9_MOUSE Transmembrane protease serine 9 OS=Mus musculus GN=Tmprss9 PE=2 SV=1

 Score =  147 bits (371), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/281 (33%), Positives = 141/281 (50%), Gaps = 44/281 (15%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL--CNG 162
           CG   A R  G+IVGG+ A PGEFPW VSL+ +  HFCG TII  +W+V+AAHC      
Sbjct: 193 CGWQPAWRSAGRIVGGVEAAPGEFPWQVSLRENHEHFCGATIIGARWLVSAAHCFNEFQD 252

Query: 163 PSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDL 222
           P+  +A   +V L     S  S     VLRI  HP++   + + D+A+LEL R + +   
Sbjct: 253 PAQWAAQAGSVHLSG---SEASAVRTRVLRIAKHPAYDADTADFDVAVLELARPLPFGRY 309

Query: 223 IRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSE 281
           ++PACLP+ +  +   +   ++GWG+  E+     +  +LQK  + ++   +C + Y   
Sbjct: 310 VQPACLPAATHVFPPGKKCLISGWGYLKEDFLV--KPEVLQKATVELLDQSLCSSLYGH- 366

Query: 282 GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
               ++ +  +CAG+  G  D+C                              Q DSGGP
Sbjct: 367 ----SLTDRMVCAGYLDGKVDSC------------------------------QGDSGGP 392

Query: 342 LMLLGAESTQVI-GLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           L+         + G+VS GIGCA  R PG+YTR+TR   WI
Sbjct: 393 LVCEEPSGRFFLAGIVSWGIGCAEARRPGVYTRVTRLRDWI 433

Serase-1 and serase-2 are serine proteases that hydrolyze the peptides N-t-Boc-Gln-Ala-Arg-AMC and N-t-Boc-Gln-Gly-Arg-AMC. In contrast, N-t-Boc-Ala-Phe-Lys-AMC and N-t-Boc-Ala-Pro-Ala-AMC are not significantly hydrolyzed.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|Q9DBI0|TMPS6_MOUSE Transmembrane protease serine 6 OS=Mus musculus GN=Tmprss6 PE=1 SV=4

 Score =  147 bits (370), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 133/276 (48%), Gaps = 43/276 (15%)

Query: 114 TGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           + +IVGG  ++ GE+PW  SL+  G H CGG +I ++W++TAAHC     S  S     V
Sbjct: 574 SSRIVGGTVSSEGEWPWQASLQIRGRHICGGALIADRWVITAAHCF-QEDSMASPKLWTV 632

Query: 174 TL-KEHDLSR-PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
            L K    SR P   +  V R+  HP H   S + D+ALL+L   + +S  +RP CLP+ 
Sbjct: 633 FLGKMRQNSRWPGEVSFKVSRLFLHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCLPAR 692

Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
           S  +   Q   + GWG   E    G  SN LQKV + +V   +C     SE  +  V   
Sbjct: 693 SHFFEPGQHCWITGWGAQREG---GPVSNTLQKVDVQLVPQDLC-----SEAYRYQVSPR 744

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG+ +G KDAC                              Q DSGGPL+       
Sbjct: 745 MLCAGYRKGKKDAC------------------------------QGDSGGPLVCREPSGR 774

Query: 351 QVI-GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             + GLVS G+GC RP   G+YTR+TR I WI   L
Sbjct: 775 WFLAGLVSWGLGCGRPNFFGVYTRVTRVINWIQQVL 810

Serine protease which hydrolyzes a range of proteins including type I collagen, fibronectin and fibrinogen. Can also activate urokinase-type plasminogen activator with low efficiency (By similarity). May play a specialized role in matrix remodeling processes in liver. Required to sense iron deficiency. Overexpression suppresses activation of the HAMP promoter.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
383856743	272	PREDICTED: serine proteinase stubble-lik	0.652	0.930	0.447	8e-68
307198272	265	Transmembrane protease, serine 9 [Harpeg	0.639	0.935	0.458	3e-67
345494565	310	PREDICTED: transmembrane protease serine	0.649	0.812	0.446	9e-67
328792489	294	PREDICTED: transmembrane protease serine	0.659	0.870	0.422	2e-66
270004848	306	serine protease H42 [Tribolium castaneum	0.659	0.836	0.439	3e-66
91078598	276	PREDICTED: similar to GA19914-PA [Tribol	0.659	0.927	0.439	5e-66
307173049	264	Transmembrane protease, serine 9 [Campon	0.636	0.935	0.463	6e-66
332029816	259	Serine proteinase stubble [Acromyrmex ec	0.626	0.938	0.452	9e-64
321463790	246	hypothetical protein DAPPUDRAFT_56607 [D	0.615	0.971	0.447	4e-60
357620845	294	serine protease H42 [Danaus plexippus]	0.654	0.863	0.417	1e-57

>gi|383856743|ref|XP_003703867.1| PREDICTED: serine proteinase stubble-like [Megachile rotundata]

 Score =  263 bits (673), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 131/293 (44%), Positives = 182/293 (62%), Gaps = 40/293 (13%)

Query: 100 IAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL 159
           +A VPCG+     RT ++VGG  A P EFPW+VS+ R GGHFCGGTI++ ++++TAAHCL
Sbjct: 4   VADVPCGQGTFGTRTARLVGGQNAIPHEFPWMVSISRKGGHFCGGTILNSRFVLTAAHCL 63

Query: 160 CNGPSPLSASQINVTLKEHDLSRPSISTVPVLR---IMFHPSHSCSSFNNDIALLELTRS 216
           C+G S +   Q+ V+L E++L  P +      R   ++ HP H C  + +DIALLEL R 
Sbjct: 64  CSGTSLIPTGQLRVSLGEYNLRGPEVPASKEERVSGVILHPGHKCGKYADDIALLELARP 123

Query: 217 IQWSDLIRPACLP--SGSLDYSEQS---VTVAGWGWTNENPSQGRRSNILQKVALSVVSN 271
           I WS+ ++PACLP  +G   YS         AGWGW  E+ S+ +R+++LQKV + V+ N
Sbjct: 124 ISWSESVKPACLPVATGKPGYSAFGGVLAKAAGWGWFGEDRSKYKRADVLQKVDVRVIEN 183

Query: 272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWD 331
            VC+ WY S+GK   V+  QMCAGHE+GG+D+CW                          
Sbjct: 184 NVCREWYASQGKSTRVEPKQMCAGHEEGGRDSCW-------------------------- 217

Query: 332 PPLQADSGGPLML--LGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
               ADSGGPLM+     ++  V+G+VS+G+GCARPRLPGLYTR++ Y+ WIS
Sbjct: 218 ----ADSGGPLMIGSQSGDNMMVVGIVSSGVGCARPRLPGLYTRVSEYVPWIS 266

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307198272|gb|EFN79272.1| Transmembrane protease, serine 9 [Harpegnathos saltator]

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 132/288 (45%), Positives = 180/288 (62%), Gaps = 40/288 (13%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS 164
           CGRS +  R+ +IVGG  A P EFPW+VS+ R GGHFCGG I+++++++TAAHCLC+G +
Sbjct: 1   CGRSESGIRSARIVGGQEAAPHEFPWLVSITRKGGHFCGGAILNDRFVLTAAHCLCSGTN 60

Query: 165 PLSASQINVTLKEHDLSRPSISTV---PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSD 221
            +   Q+ VTL EH+L  P +       V+  + HP H C  + +DIALLEL R I WS+
Sbjct: 61  KIPVGQLRVTLGEHNLKAPEVPAARHESVINAVLHPGHRCGKYVDDIALLELARPITWSE 120

Query: 222 LIRPACLP--SGSLDYSE---QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA 276
            ++PACLP  +G   YS    +   VAGWGW  E+ S+ +R+++LQKV + VV+N VC  
Sbjct: 121 SVKPACLPVATGKPGYSAFGGEHAIVAGWGWLGEDRSRYKRTDVLQKVEVRVVANTVCSE 180

Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           WY S+GK   V  +QMCAG+E+GG+D+CW                              A
Sbjct: 181 WYASQGKSTRVGSTQMCAGYEEGGRDSCW------------------------------A 210

Query: 337 DSGGPLMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
           DSGGPLM+      S  V+G+VSTGIGC+RPRLPG+YTR + YI WI+
Sbjct: 211 DSGGPLMVGSRPGGSAMVVGVVSTGIGCSRPRLPGIYTRTSDYISWIT 258

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345494565|ref|XP_001603026.2| PREDICTED: transmembrane protease serine 9 [Nasonia vitripennis]

 Score =  260 bits (664), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 130/291 (44%), Positives = 180/291 (61%), Gaps = 39/291 (13%)

Query: 100 IAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL 159
           +A V CG+S ++ R  +IVGG  A P EFPW+VS+ R G HFCGGTI++ ++++TAAHC 
Sbjct: 44  VADVSCGQSESNVRQARIVGGQDAIPREFPWLVSITRKGAHFCGGTILNSKFVLTAAHCF 103

Query: 160 CNGPSPLSASQINVTLKEHDL---SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS 216
           C+    +  SQ+ VTL EHDL     P   T+ V  ++ HP + C  +N+DIALLE++  
Sbjct: 104 CSRNGMMPVSQLRVTLGEHDLQAAESPVSVTIAVRSMIVHPVYECGKWNSDIALLEMSEP 163

Query: 217 IQWSDLIRPACLP-----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN 271
           I+WS+ + PACLP     SG   +S +S   AGWGW  ++ +   ++N+LQKVA++V+ +
Sbjct: 164 IEWSESVMPACLPPETGRSGYSAFSGKSAVTAGWGWLGDDKAIYSKANVLQKVAVNVIED 223

Query: 272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWD 331
           QVC  WY S+GK   VK  QMCAGHE GG+D+C                           
Sbjct: 224 QVCSEWYASQGKAFRVKYGQMCAGHETGGRDSC--------------------------- 256

Query: 332 PPLQADSGGPLMLLGA-ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
               ADSGGPLM  G  + T VIG+VSTGIGCA+ RLPG+YTR++ ++ WI
Sbjct: 257 ---AADSGGPLMFAGGNQKTMVIGIVSTGIGCAKFRLPGIYTRVSEFVPWI 304

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792489|ref|XP_001119901.2| PREDICTED: transmembrane protease serine 9 [Apis mellifera]

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/296 (42%), Positives = 181/296 (61%), Gaps = 40/296 (13%)

Query: 100 IAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL 159
           +A VPCG+     RT K+VGG  A P EFPW+VS+ R GGHFCGGTI++ ++++TAAHCL
Sbjct: 28  VADVPCGQRNIGIRTAKLVGGQNAIPHEFPWMVSISRKGGHFCGGTILNSKYVLTAAHCL 87

Query: 160 CNGPSPLSASQINVTLKEHDLSRPSISTVPVLRI---MFHPSHSCSSFNNDIALLELTRS 216
           C+  S +  +Q+ ++L E++L  P I      R+   + HP H C  + +DIA+LEL R 
Sbjct: 88  CSSTSVIPTNQLRISLGEYNLKGPEIPASKEERVVNAILHPGHKCGKYADDIAILELARP 147

Query: 217 IQWSDLIRPACLP-----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN 271
           I WS+ ++PACLP      G   ++ +    AGWGW  E+ S+ +R+++LQKV + V+ N
Sbjct: 148 IIWSESVKPACLPVATGKPGYSTFNGELAKAAGWGWFGEDRSKYKRADVLQKVEVRVIEN 207

Query: 272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWD 331
            +C+ WY S+GK   V+  QMCAGHE+GG+D+CW                          
Sbjct: 208 NICREWYASQGKSTRVESKQMCAGHEEGGRDSCW-------------------------- 241

Query: 332 PPLQADSGGPLMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
                DSGGPLM+      +  V+G+VS+G+GCARPRLPG+YTR++ YI WI+  +
Sbjct: 242 ----GDSGGPLMITSHLNGNVMVVGIVSSGVGCARPRLPGVYTRVSEYISWITQHI 293

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004848|gb|EFA01296.1| serine protease H42 [Tribolium castaneum]

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 131/298 (43%), Positives = 181/298 (60%), Gaps = 42/298 (14%)

Query: 100 IAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL 159
           +A V CGR  + RR GKIVGG  A+ GEFPW+VS+ R GGHFCGGT+I  ++I+TA HCL
Sbjct: 39  VADVKCGRK-SVRRDGKIVGGTNADKGEFPWLVSITRRGGHFCGGTLISNRFILTAGHCL 97

Query: 160 CNG--PSPLSASQINVTLKEHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTR 215
           C G     +  + I VT+ +HDL+  S     + +  I  HP ++C    +DIA+LEL  
Sbjct: 98  CTGIGTDTVKPTHIKVTIAQHDLTNKSSDAYEMTLKAISIHPDYTCGKVKDDIAILELDN 157

Query: 216 SIQWSDLIRPACLPSGSLDYSEQSV-----TVAGWGWTNENPSQGRRSNILQKVALSVVS 270
            + WSD + PACL + S +   + +      VAGWGWTNE+ S+G R+ ILQK  ++V+ 
Sbjct: 158 KLVWSDSVSPACLAASSDEDDYRPIDGLPAVVAGWGWTNEDSSKGGRAKILQKAKVNVIR 217

Query: 271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHW 330
            + C+ W+QS+GKK  ++ +Q+CAGHEQGG DACW                         
Sbjct: 218 TEKCRQWFQSQGKKTKIQNTQICAGHEQGGIDACW------------------------- 252

Query: 331 DPPLQADSGGPLMLL--GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                ADSGGPLM+     +   V+G+VSTGIGCARP LPGLYTR++ YI W+ + ++
Sbjct: 253 -----ADSGGPLMIETGAVDQMMVVGVVSTGIGCARPFLPGLYTRISEYIPWVREIVN 305

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91078598|ref|XP_966366.1| PREDICTED: similar to GA19914-PA [Tribolium castaneum]

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 131/298 (43%), Positives = 181/298 (60%), Gaps = 42/298 (14%)

Query: 100 IAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL 159
           +A V CGR  + RR GKIVGG  A+ GEFPW+VS+ R GGHFCGGT+I  ++I+TA HCL
Sbjct: 9   VADVKCGRK-SVRRDGKIVGGTNADKGEFPWLVSITRRGGHFCGGTLISNRFILTAGHCL 67

Query: 160 CNG--PSPLSASQINVTLKEHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTR 215
           C G     +  + I VT+ +HDL+  S     + +  I  HP ++C    +DIA+LEL  
Sbjct: 68  CTGIGTDTVKPTHIKVTIAQHDLTNKSSDAYEMTLKAISIHPDYTCGKVKDDIAILELDN 127

Query: 216 SIQWSDLIRPACLPSGSLDYSEQSV-----TVAGWGWTNENPSQGRRSNILQKVALSVVS 270
            + WSD + PACL + S +   + +      VAGWGWTNE+ S+G R+ ILQK  ++V+ 
Sbjct: 128 KLVWSDSVSPACLAASSDEDDYRPIDGLPAVVAGWGWTNEDSSKGGRAKILQKAKVNVIR 187

Query: 271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHW 330
            + C+ W+QS+GKK  ++ +Q+CAGHEQGG DACW                         
Sbjct: 188 TEKCRQWFQSQGKKTKIQNTQICAGHEQGGIDACW------------------------- 222

Query: 331 DPPLQADSGGPLMLL--GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                ADSGGPLM+     +   V+G+VSTGIGCARP LPGLYTR++ YI W+ + ++
Sbjct: 223 -----ADSGGPLMIETGAVDQMMVVGVVSTGIGCARPFLPGLYTRISEYIPWVREIVN 275

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173049|gb|EFN64185.1| Transmembrane protease, serine 9 [Camponotus floridanus]

 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 134/289 (46%), Positives = 179/289 (61%), Gaps = 42/289 (14%)

Query: 104 PCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGP 163
           PCGRS    R  +IVGG  A P EFPW+VS+ R GGHFCGG I++ ++I++AAHCLC+G 
Sbjct: 1   PCGRS--GIREARIVGGQDATPREFPWLVSITRKGGHFCGGAILNSRFILSAAHCLCSGT 58

Query: 164 SPLSASQINVTLKEHDLSRPSISTV---PVLRIMFHPSHSCSSFNNDIALLELTRSIQWS 220
           + +   Q+ VTL EH+L  P +       V+  + HPSH C  + +DIALLEL R I WS
Sbjct: 59  NKIPVGQLRVTLGEHNLRAPEMPAARHESVINAVLHPSHRCGKYVDDIALLELARPISWS 118

Query: 221 DLIRPACLP--SGSLDYSE---QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ 275
           + ++PACLP  +G+  YS        VAGWGW  E+ S+ +R+++LQKV + VV+N VC 
Sbjct: 119 ESVKPACLPVATGTPGYSTFGGMEAIVAGWGWLGEDQSRYKRADVLQKVEVRVVANTVCS 178

Query: 276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ 335
            WY S+GK   V+  QMCAG E+GG+D+CW                              
Sbjct: 179 EWYASQGKSTRVESKQMCAGWEEGGRDSCW------------------------------ 208

Query: 336 ADSGGPLMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
           ADSGGPLM+    A    VIG+VSTGIGC+RPRLPG+YTR++ Y+ WI+
Sbjct: 209 ADSGGPLMVRSHPAGPLMVIGVVSTGIGCSRPRLPGIYTRVSDYVSWIT 257

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029816|gb|EGI69685.1| Serine proteinase stubble [Acromyrmex echinatior]

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 128/283 (45%), Positives = 173/283 (61%), Gaps = 40/283 (14%)

Query: 113 RTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           R  +IVGG  A P EFPW+VS+ R GGHFCGGTI+++++I+TA HCLC+G + +   Q+ 
Sbjct: 3   REARIVGGQDATPREFPWMVSITRKGGHFCGGTILNDKFILTAGHCLCSGTNKIPIGQLR 62

Query: 173 VTLKEHDLSRPSISTV---PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP 229
           VTL EH+L  P +       V+  + HP H C  + +DIALLE  R I WS+ ++PACLP
Sbjct: 63  VTLGEHNLRAPEVPAARHESVINAVLHPGHKCGKYVDDIALLEFARPISWSESVKPACLP 122

Query: 230 --SGSLDYSEQS---VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKK 284
             +G   YS  S     VAGWGW  E+ S+ +R+++LQKV + VV+N VC  WY S+GK 
Sbjct: 123 VATGKPGYSAFSGVEAIVAGWGWLGEDRSKYKRADVLQKVEVRVVTNAVCDEWYASQGKS 182

Query: 285 INVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLML 344
            +V+  QMCAG E+GGKD+CW                              ADSGGPLM+
Sbjct: 183 FSVETKQMCAGWEEGGKDSCW------------------------------ADSGGPLMV 212

Query: 345 --LGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
               A    VIG+VSTGIGC+R RLPG+Y R++ Y+ WI+  +
Sbjct: 213 GSYPAGPLMVIGVVSTGIGCSRSRLPGIYVRVSDYVPWITQEV 255

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321463790|gb|EFX74803.1| hypothetical protein DAPPUDRAFT_56607 [Daphnia pulex]

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 163/277 (58%), Gaps = 38/277 (13%)

Query: 113 RTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           R GKIV GL A   EFPWIVSLK  G HFCGG +I+ +W +TAAHCL N  +P    QI 
Sbjct: 2   RNGKIVNGLDAAEAEFPWIVSLKLRGEHFCGGALINSRWALTAAHCLLNRRAP----QIQ 57

Query: 173 VTLKEHDLSRPSISTVPVLR---IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP 229
           V++ EH+L         + R   I+ HPS+      +DIAL+ L   +QWSD ++PACLP
Sbjct: 58  VSVAEHNLLGADSQQTKLFRVNQIVMHPSYVTRQLADDIALINLDGDVQWSDRVQPACLP 117

Query: 230 SGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
           +   D ++    TVAGWGW +E  + G+R+N LQKV + +++N+ CQ WY+ E K + + 
Sbjct: 118 NPDEDSFAGLLATVAGWGWNDEVKNGGKRANTLQKVDVPILTNKDCQKWYKDEKKSLTII 177

Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
            S +CAG E GGKD+C                              Q DSGGPLM+    
Sbjct: 178 NSALCAGLENGGKDSC------------------------------QGDSGGPLMIKKDG 207

Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             Q++G+VS GIGCARPRLPGLYTR+  YI WIS T+
Sbjct: 208 RHQLVGVVSAGIGCARPRLPGLYTRVNHYINWISQTV 244

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357620845|gb|EHJ72886.1| serine protease H42 [Danaus plexippus]

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/290 (41%), Positives = 176/290 (60%), Gaps = 36/290 (12%)

Query: 100 IAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL 159
           +A V CG  L + R+G+IVGG  + P EFPW  SL R G H CG TII+ +W+VTA HC+
Sbjct: 23  LADVDCG--LLNARSGRIVGGTNSLPAEFPWAASLWRQGTHQCGATIINNRWLVTAGHCV 80

Query: 160 CNGPSPLSAS-QINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ 218
           C+       S Q+ V     D+S  S     + +I+ HP + C    ND+ALL+  + + 
Sbjct: 81  CSVFDEFYKSKQLTVVAGYTDIS-ASDKNQRLSKIIPHPDYRCKKKTNDVALLKTEQQLV 139

Query: 219 WSDLIRPACLP-SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAW 277
           W++ +RPACLP + S D++ +S TVAGWG+TNE+   G R N+LQK  ++VV N  C +W
Sbjct: 140 WTNELRPACLPRAKSSDFTGKSATVAGWGFTNEDRGIGERPNVLQKTEVTVVENGECNSW 199

Query: 278 YQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           Y+S+G K+ +  +QMCAG++QGG+D+CW                              AD
Sbjct: 200 YESQGSKVRIIATQMCAGYKQGGRDSCW------------------------------AD 229

Query: 338 SGGPLMLLGAES-TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGPLML G +  T +IG+VSTG GCAR ++PG+YTR++++  WI  +++
Sbjct: 230 SGGPLMLQGEKGHTMLIGVVSTGSGCARAKMPGIYTRVSKFTDWIVSSVN 279

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
FB|FBgn0036817	265	CG6865 [Drosophila melanogaste	0.518	0.758	0.414	1.1e-56
UNIPROTKB|F1SUG2	632	PRSS22 "Uncharacterized protei	0.528	0.324	0.352	2.9e-50
UNIPROTKB|E2R7Q1	618	PRSS27 "Uncharacterized protei	0.505	0.317	0.353	6.8e-47
UNIPROTKB|F1RIS0	855	F1RIS0 "Uncharacterized protei	0.5	0.226	0.355	4.2e-46
UNIPROTKB|I3LDL1	1047	TMPRSS9 "Uncharacterized prote	0.5	0.185	0.360	9.2e-43
RGD|1309581	1061	Tmprss9 "transmembrane proteas	0.523	0.191	0.337	2.8e-36
ZFIN|ZDB-GENE-070720-11	542	zgc:165423 "zgc:165423" [Danio	0.507	0.363	0.379	1.5e-42
FB|FBgn0033362	561	CG8172 [Drosophila melanogaste	0.505	0.349	0.331	7.6e-41
FB|FBgn0036427	411	CG4613 [Drosophila melanogaste	0.494	0.467	0.347	4e-40
UNIPROTKB|G3MX30	774	G3MX30 "Uncharacterized protei	0.543	0.272	0.345	7.9e-40

FB|FBgn0036817 CG6865 [Drosophila melanogaster (taxid:7227)]

 Score = 440 (159.9 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
 Identities = 90/217 (41%), Positives = 131/217 (60%)

Query:   100 IAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL 159
             ++  PC     S R  KIVGG  A   E P++VSL R GGHFCGGTII E+WI+TA HC+
Sbjct:     3 VSNQPC-----SVRNPKIVGGSEAERNEMPYMVSLMRRGGHFCGGTIISERWILTAGHCI 57

Query:   160 CNGPSP-LSASQINVTLKEHDLSR--PSISTVP-VLRIMF-----HPSHSCSSFNNDIAL 210
             CNG    +  +QI   +  H +      I   P  LR+ F     HP + C+   +DIAL
Sbjct:    58 CNGLQQFMKPAQIQGVVGLHSIREYLNGIGNGPDALRVDFKNIVPHPQYDCNDVKHDIAL 117

Query:   211 LELTRSIQWSDLIRPACLPS--GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSV 268
             LEL + I++S  I+P+C+ S  G     ++  TV+GWGWT+EN ++  RS++L+K  + +
Sbjct:   118 LELVQPIRFSSHIQPSCVGSEEGHRSLEQEYGTVSGWGWTHENQAENDRSDVLRKATVKI 177

Query:   269 VSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACW 305
              +N+ C+  Y+S GK   + E+Q+CAG+E G  D+CW
Sbjct:   178 WNNEACERSYRSLGKSNTIGETQLCAGYENGQIDSCW 214

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

UNIPROTKB|F1SUG2 PRSS22 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 334 (122.6 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
 Identities = 78/221 (35%), Positives = 122/221 (55%)

Query:    92 LEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQW 151
             L +  +SP   V CGR    R   ++VGG  A  GE+PW VS++R+G HFCGG++I EQW
Sbjct:   373 LPIVATSPAPPV-CGRQ---RTLNRLVGGQDALEGEWPWQVSIQRNGSHFCGGSLITEQW 428

Query:   152 IVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALL 211
             ++TAAHC  N  S  S  Q+ +  ++     P    V V R+  +P +   + + D+AL+
Sbjct:   429 VLTAAHCFSN-TSQTSLYQVLLGARQLVKPGPHAVYVQVKRVERNPLYQGMASSADVALV 487

Query:   212 ELTRSIQWSDLIRPACLPSGSLDYSEQ-SVTVAGWGWTNENPSQGRRSN--ILQKVALSV 268
             EL   + ++D I P C+P  S+ +       V GWG  +E   Q R  N  +LQK+A+ V
Sbjct:   488 ELAAPVTFTDYILPVCVPDPSVAFETGLRCWVTGWGSPSE---QERLPNPRVLQKLAVPV 544

Query:   269 VSNQVCQAWYQSEGKKIN-----VKESQMCAGHEQGGKDAC 304
             +   +C   Y+++ ++       +K+  +CAG  +G KDAC
Sbjct:   545 IDTPMCDRLYRTDAEESGFQPKTIKDDMLCAGFAEGKKDAC 585

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|E2R7Q1 PRSS27 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 308 (113.5 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
 Identities = 76/215 (35%), Positives = 116/215 (53%)

Query:    98 SPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAH 157
             SPI    CGR    R   ++VGG  A  GE+PW VS++R+G HFCGG+++ E+W++TAAH
Sbjct:   368 SPIV---CGRP---RMLNRMVGGWDALEGEWPWQVSIQRNGSHFCGGSLLTERWVLTAAH 421

Query:   158 CLCNGPSPLSASQINVTLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTR 215
             C  N  S  S  Q  V L    L RP    V   V R+  +P +   + + D+AL+EL  
Sbjct:   422 CFSN-TSETSLYQ--VLLGARQLVRPGPHAVYARVKRVESNPLYRGMASSADVALVELEA 478

Query:   216 SIQWSDLIRPACLP--SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV 273
              + +++ I P C+P  SG+ + +  S  V GWG  +E   +     +LQK+A+ ++    
Sbjct:   479 PVTFTNYILPVCVPDPSGAFE-AGMSCWVTGWGSPSEE-DRLPSPRVLQKLAVPIIDTPK 536

Query:   274 CQAWYQSEGKK----INVKESQMCAGHEQGGKDAC 304
             C   Y  + +       +K+  +CAG  +G KDAC
Sbjct:   537 CNLLYSKDAEAGLQPKAIKDDMLCAGFAEGKKDAC 571

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|F1RIS0 F1RIS0 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 335 (123.0 bits), Expect = 4.2e-46, Sum P(3) = 4.2e-46
 Identities = 74/208 (35%), Positives = 115/208 (55%)

Query:   103 VPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNG 162
             V CG  +  +  G+I GG  ++PG++PW VS+  +G H CGG+++ +QW+++AAHC    
Sbjct:   603 VSCG--IVPQAQGRITGGSNSDPGQWPWQVSINYNGEHVCGGSLVSDQWVLSAAHCF--- 657

Query:   163 PSPLSASQINVTLKEHDLSRPSIS-TV-PVLRIMFHPSHSCSSFNNDIALLELTRSIQWS 220
             P   S S   V L  H L   S S TV  V +++ HPS+       DIALL+L+  + +S
Sbjct:   658 PRDHSTSAYEVKLGAHQLDSFSSSMTVRTVAQVISHPSYLQEGSEGDIALLQLSSPVTFS 717

Query:   221 DLIRPACLPSGSLDYSEQ-SVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
               I P CLP+ +  +      TV GWG  +  PS G R   LQ++ + ++S + C   Y 
Sbjct:   718 RYIWPICLPAANASFPNGLQCTVTGWG--HVAPS-GERPRTLQQLEVPLISRETCNCLYN 774

Query:   280 SEGKKIN---VKESQMCAGHEQGGKDAC 304
              +        +++  +CAG+ +GGKDAC
Sbjct:   775 IDANPDEPHFIQQDMLCAGYVKGGKDAC 802

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|I3LDL1 TMPRSS9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 288 (106.4 bits), Expect = 9.2e-43, Sum P(3) = 9.2e-43
 Identities = 76/211 (36%), Positives = 107/211 (50%)

Query:    99 PIAGV--P-CGRSLASRRTGKIVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVT 154
             P  G+  P CG + A+  T +IVGG AA  GE+PW VSL  R   H CG  ++ E+W+++
Sbjct:   795 PTMGIQLPDCGLAPAAALT-RIVGGSAAGRGEWPWQVSLWLRRREHRCGAVLVAERWLLS 853

Query:   155 AAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELT 214
             AAHC      P    Q    L    LS        V+RI  HP ++  + + D+ALLEL 
Sbjct:   854 AAHCFDVYGDP---KQWAAFLGTPFLSGADGQLERVVRIHKHPFYNVYTLDYDVALLELA 910

Query:   215 RSIQWSDLIRPACLPS-GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV 273
               ++ S L+RP CLP  G          + GWG   E  S  R+   LQK A+ ++S Q 
Sbjct:   911 GPVRRSRLVRPICLPEPGPRPPDGARCVITGWGSVREGGSMARQ---LQKAAVRLLSEQT 967

Query:   274 CQAWYQSEGKKINVKESQMCAGHEQGGKDAC 304
             C+ +Y      + +    +CAG  QGG D+C
Sbjct:   968 CRRFYP-----VQISSRMLCAGFPQGGVDSC 993

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

RGD|1309581 Tmprss9 "transmembrane protease, serine 9" [Rattus norvegicus (taxid:10116)]

 Score = 315 (115.9 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
 Identities = 73/216 (33%), Positives = 115/216 (53%)

Query:    92 LEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQW 151
             ++    S  A   CG   A R  G+IVGG  A PGEFPW VSL+ +  HFCG TII  +W
Sbjct:   180 VDCSDGSDEAQCDCGWQPAWRSAGRIVGGAEAAPGEFPWQVSLRENHEHFCGATIIGARW 239

Query:   152 IVTAAHCL--CNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIA 209
             +V+AAHC      P+  +A   +V L     S  S     VLRI  HP+++  + + D+A
Sbjct:   240 LVSAAHCFNEFQDPAQWAAQAGSVHLSG---SEASAVRARVLRIAKHPAYNADTADFDVA 296

Query:   210 LLELTRSIQWSDLIRPACLPSGSLDYS-EQSVTVAGWGWTNENPSQGRRSNILQKVALSV 268
             +LEL R + +   ++PACLP+ +  +   +   ++GWG+  E+     +  +LQK  + +
Sbjct:   297 VLELARPLPFGRYVQPACLPAATHVFPPRKKCLISGWGYLKEDFLV--KPEVLQKATVEL 354

Query:   269 VSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDAC 304
             +   +C + Y   G  +   +  +CAG+  G  D+C
Sbjct:   355 LDQNLCSSLY---GHSLT--DRMVCAGYLDGKVDSC 385

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

ZFIN|ZDB-GENE-070720-11 zgc:165423 "zgc:165423" [Danio rerio (taxid:7955)]

 Score = 352 (129.0 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
 Identities = 79/208 (37%), Positives = 121/208 (58%)

Query:    99 PIAGVP-CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAH 157
             P    P CG+  A   T KIVGG  A+ G +PW  SL   G HFCGG++I +QWI++AAH
Sbjct:    26 PTQSPPACGK--APLNT-KIVGGTNASAGSWPWQASLHESGSHFCGGSLISDQWILSAAH 82

Query:   158 CLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSI 217
             C  + P+P S   + +  +  DL  P+  +  V +++ HP +  S+ +ND+ALL L+  +
Sbjct:    83 CFPSNPNP-SDYTVYLGRQSQDLPNPNEVSKSVSQVIVHPLYQGSTHDNDMALLHLSSPV 141

Query:   218 QWSDLIRPACLPS-GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA 276
              +S+ I+P CL + GS  Y++ ++ + GWG T E+        ILQ+V + +V N +C  
Sbjct:   142 TFSNYIQPVCLAADGSTFYND-TMWITGWG-TIESGVSLPSPQILQEVNVPIVGNNLCNC 199

Query:   277 WYQSEGKKINVKESQMCAGHEQGGKDAC 304
              Y   G   ++  + MCAG  QGGKD+C
Sbjct:   200 LY---GGGSSITNNMMCAGLMQGGKDSC 224

GO:0003824 "catalytic activity" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

FB|FBgn0033362 CG8172 [Drosophila melanogaster (taxid:7227)]

 Score = 324 (119.1 bits), Expect = 7.6e-41, Sum P(2) = 7.6e-41
 Identities = 71/214 (33%), Positives = 117/214 (54%)

Query:    99 PIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG----GHFCGGTIIHEQWIVT 154
             P+ G  CG      R+ +IVGG +   G  PW V+L + G       CGG +I  +W++T
Sbjct:   302 PVPG--CGEVYT--RSNRIVGGHSTGFGSHPWQVALIKSGFLTRKLSCGGALISNRWVIT 357

Query:   155 AAHCLCNGPSPLSASQINVTLKEHDL----SRPSISTVPVLRIMFHPSHSCSSFNNDIAL 210
             AAHC+ + P+    S + + L E D+     R +     + R   HP ++ + F ND+AL
Sbjct:   358 AAHCVASTPN----SNMKIRLGEWDVRGQEERLNHEEYGIERKEVHPHYNPADFVNDVAL 413

Query:   211 LELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS 270
             + L R++ +   I P CLP  +   + +  TVAGWG T     Q    ++LQ+V + V+S
Sbjct:   414 IRLDRNVVYKQHIIPVCLPPSTTKLTGKMATVAGWGRTRHG--QSTVPSVLQEVDVEVIS 471

Query:   271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDAC 304
             N  CQ W+++ G++  + +  +CAG++ GG+D+C
Sbjct:   472 NDRCQRWFRAAGRREAIHDVFLCAGYKDGGRDSC 505

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

FB|FBgn0036427 CG4613 [Drosophila melanogaster (taxid:7227)]

 Score = 285 (105.4 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
 Identities = 73/210 (34%), Positives = 116/210 (55%)

Query:   116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
             +IVGG      ++PWI  + R    FCGGT+I++++++TAAHC+ +G   +    ++V L
Sbjct:   173 RIVGGTQVRTNKYPWIAQIIRGTFLFCGGTLINDRYVLTAAHCV-HG---MDMRGVSVRL 228

Query:   176 KEHDLSRPSIS-TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL- 233
              + D S   +  T  V     H  +   S  +DIALL L + I   D +RPACLPS  L 
Sbjct:   229 LQLDRSSTHLGVTRSVAFAHAHVGYDPVSLVHDIALLRLDQPIPLVDTMRPACLPSNWLQ 288

Query:   234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAW-YQSEGKKINVKESQM 292
             ++  Q   VAGWG + E    G  S++LQ+V + +++N  C+A  Y+S      + ++ M
Sbjct:   289 NFDFQKAIVAGWGLSQEG---GSTSSVLQEVVVPIITNAQCRATSYRSM-----IVDTMM 340

Query:   293 CAGH-EQGGKDACWVSRQWWTPHVARGRVY 321
             CAG+ + GG+DAC        P + R R++
Sbjct:   341 CAGYVKTGGRDAC--QGDSGGPLIVRDRIF 368

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

UNIPROTKB|G3MX30 G3MX30 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 293 (108.2 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
 Identities = 82/237 (34%), Positives = 127/237 (53%)

Query:    77 SPTSVVQLLTRW---TLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVS 133
             SP   + LLT     T+D  V G  P +  P      SRR   I GG+ A P  +PW V 
Sbjct:   505 SPRQELLLLTSCEVSTVDYGVCGIPPFS--P---QWLSRR---IAGGVEACPHCWPWQVG 556

Query:   134 LKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLR- 192
             L+  G H CGG II+  WI+TAAHC+ +  +PL  +   +   +HD++    ST  V R 
Sbjct:   557 LRFLGNHQCGGAIINSIWILTAAHCVQSKNNPLFWT---IVAGDHDITLKE-STEQVRRA 612

Query:   193 --IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD--YSEQSVTVAGWGWT 248
               I+ H      S+++DIAL++L+ +++++ ++RP CLP  SL+  +S +   V GWG  
Sbjct:   613 KHIVMHEDFDSLSYDSDIALIQLSSALEFNSVVRPVCLPH-SLEPLFSSEICVVTGWGSA 671

Query:   249 NENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGG-KDAC 304
             N++   G  ++ LQ++ + V+  +VC+  Y S      + E  +CAG    G KD C
Sbjct:   672 NKD---GGLASRLQQIQVPVLEREVCERTYYSAHPG-GISEKMICAGFAASGEKDKC 724

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.21	0.691
3rd Layer	3.4.21.10	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	388
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	5e-79
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	2e-76
pfam00089	218	pfam00089, Trypsin, Trypsin	1e-52
COG5640	413	COG5640, COG5640, Secreted trypsin-like serine pro	1e-23
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	2e-16
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	2e-14
pfam00089	218	pfam00089, Trypsin, Trypsin	3e-08

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score =  242 bits (620), Expect = 5e-79
 Identities = 103/272 (37%), Positives = 148/272 (54%), Gaps = 44/272 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG  A  G FPW VSL+   G HFCGG++I  +W++TAAHC+       + S   V L
Sbjct: 1   IVGGSEAKIGSFPWQVSLQYTGGRHFCGGSLISPRWVLTAAHCV----YSSAPSNYTVRL 56

Query: 176 KEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             HDLS        + V +++ HP+++ S+++NDIALL+L R +  SD +RP CLPS   
Sbjct: 57  GSHDLSSNEGGGQVIKVKKVIVHPNYNPSTYDNDIALLKLKRPVTLSDNVRPICLPSSGY 116

Query: 234 D-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
           +  +  + TV+GWG T+E    G   ++LQ+V + +VSN  C+  Y   G    + ++ +
Sbjct: 117 NLPAGTTCTVSGWGRTSEG---GPLPDVLQEVNVPIVSNAECKRAYSYGGT---ITDNML 170

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG  +GGKDAC                              Q DSGGPL+        +
Sbjct: 171 CAGGLEGGKDAC------------------------------QGDSGGPLVCNDNGRGVL 200

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
           +G+VS G GCARP  PG+YTR++ Y+ WI  T
Sbjct: 201 VGIVSWGSGCARPNYPGVYTRVSSYLDWIQKT 232

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score =  235 bits (602), Expect = 2e-76
 Identities = 104/269 (38%), Positives = 148/269 (55%), Gaps = 43/269 (15%)

Query: 116 KIVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           +IVGG  AN G FPW VSL+  GG HFCGG++I  +W++TAAHC+         S I V 
Sbjct: 1   RIVGGSEANIGSFPWQVSLQYGGGRHFCGGSLISPRWVLTAAHCVRGSD----PSNIRVR 56

Query: 175 LKEHDLSRPSIS-TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
           L  HDLS       + V +++ HP+++ S+++NDIALL+L   +  SD +RP CLPS + 
Sbjct: 57  LGSHDLSSGEEGQVIKVSKVIIHPNYNPSTYDNDIALLKLKEPVTLSDNVRPICLPSSNY 116

Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
           +     + TV+GWG T+E    G   + LQ+V + +VSN  C+  Y   G    + ++ +
Sbjct: 117 NVPAGTTCTVSGWGRTSEGA--GSLPDTLQEVNVPIVSNATCRRAYSGGGA---ITDNML 171

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG  +GGKDAC                              Q DSGGPL+        +
Sbjct: 172 CAGGLEGGKDAC------------------------------QGDSGGPLVCND-GRWVL 200

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+VS G GCARP  PG+YTR++ Y+ WI
Sbjct: 201 VGIVSWGSGCARPGKPGVYTRVSSYLDWI 229

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score =  174 bits (443), Expect = 1e-52
 Identities = 97/269 (36%), Positives = 135/269 (50%), Gaps = 55/269 (20%)

Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG  A PG FPW VSL+   G HFCGG++I E W++TAAHC+ N  S      + V L
Sbjct: 1   IVGGDEAQPGSFPWQVSLQVSSGKHFCGGSLISENWVLTAAHCVSNAKS------VRVVL 54

Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             H++           V +++ HP+++    +NDIALL+L   +   D +RP CLP+ S 
Sbjct: 55  GAHNIVLREGGEQKFDVKKVIVHPNYN-PDTDNDIALLKLKSPVTLGDTVRPICLPTASS 113

Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
           D     + TV+GWG    N       + LQ+V + VVS + C++ Y        V ++ +
Sbjct: 114 DLPVGTTCTVSGWG----NTKTLGLPDTLQEVTVPVVSRETCRSAY-----GGTVTDNMI 164

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG   GGKDAC                              Q DSGGPL+    E   +
Sbjct: 165 CAG--AGGKDAC------------------------------QGDSGGPLVCSDGE---L 189

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           IG+VS G GCA    PG+YT ++ Y+ WI
Sbjct: 190 IGIVSWGYGCASGNYPGVYTPVSSYLDWI 218

Length = 218

>gnl|CDD|227927 COG5640, COG5640, Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

 Score =  101 bits (252), Expect = 1e-23
 Identities = 82/288 (28%), Positives = 122/288 (42%), Gaps = 59/288 (20%)

Query: 114 TGKIVGGLAANPGEFPWIVSLKRHG-----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSA 168
           + +I+GG  AN GE+P +V+L         G FCGG+ +  ++++TAAHC  +  SP+S+
Sbjct: 30  SSRIIGGSNANAGEYPSLVALVDRISDYVSGTFCGGSKLGGRYVLTAAHCA-DASSPISS 88

Query: 169 SQINVTLKEHDLS---RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRP 225
               V +  +D S   R  + T+ V     H  +S  +  NDIA+LEL R+   + L R 
Sbjct: 89  DVNRVVVDLNDSSQAERGHVRTIYV-----HEFYSPGNLGNDIAVLELARA---ASLPRV 140

Query: 226 ACLPSGSLDYSEQSVT------VAGWGWTNEN--PSQGRRSNILQKVALSVVSNQVCQAW 277
                 + D    SVT         +G T  +  P    +  IL +VA+  V    C  +
Sbjct: 141 KITSFDASDTFLNSVTTVSPMTNGTFGVTTPSDVPRSSPKGTILHEVAVLFVPLSTCAQY 200

Query: 278 YQSE-GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
                        +  CAG  +  KDAC                              Q 
Sbjct: 201 KGCANASDGATGLTGFCAG--RPPKDAC------------------------------QG 228

Query: 337 DSGGPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISD 383
           DSGGP+   G E     G+VS G G C    +PG+YT ++ Y  WI+ 
Sbjct: 229 DSGGPIFHKGEEGRVQRGVVSWGDGGCGGTLIPGVYTNVSNYQDWIAA 276

Length = 413

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
              ++LQ+V + +VSN  C+  Y   G    + ++ +CAG  +GGKDAC  DSGGPL+  
Sbjct: 137 PLPDVLQEVNVPIVSNAECKRAYSYGGT---ITDNMLCAGGLEGGKDACQGDSGGPLVCN 193

Query: 61  GAESTQVIGLVSTGIG 76
                 ++G+VS G G
Sbjct: 194 DNGRGVLVGIVSWGSG 209

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 71.6 bits (176), Expect = 2e-14
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
              + LQ+V + +VSN  C+  Y   G    + ++ +CAG  +GGKDAC  DSGGPL+  
Sbjct: 138 SLPDTLQEVNVPIVSNATCRRAYSGGGA---ITDNMLCAGGLEGGKDACQGDSGGPLVCN 194

Query: 61  GAESTQVIGLVSTGIG 76
                 ++G+VS G G
Sbjct: 195 D-GRWVLVGIVSWGSG 209

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 10/76 (13%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
              + LQ+V + VVS + C++ Y        V ++ +CAG   GGKDAC  DSGGPL+  
Sbjct: 133 GLPDTLQEVTVPVVSRETCRSAY-----GGTVTDNMICAG--AGGKDACQGDSGGPLVCS 185

Query: 61  GAESTQVIGLVSTGIG 76
             E   +IG+VS G G
Sbjct: 186 DGE---LIGIVSWGYG 198

Length = 218

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	388
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	100.0
KOG3627|consensus	256		100.0
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	100.0
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	100.0
COG5640	413	Secreted trypsin-like serine protease [Posttransla	99.98
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	99.69
PF09342	267	DUF1986: Domain of unknown function (DUF1986); Int	99.54
KOG3627|consensus	256		99.36
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	99.15
COG3591	251	V8-like Glu-specific endopeptidase [Amino acid tra	99.09
COG5640	413	Secreted trypsin-like serine protease [Posttransla	98.94
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	98.88
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	98.67
TIGR02037	428	degP_htrA_DO periplasmic serine protease, Do/DeqQ	98.39
TIGR02038	351	protease_degS periplasmic serine pepetdase DegS. T	98.31
PRK10898	353	serine endoprotease; Provisional	98.23
PRK10139	455	serine endoprotease; Provisional	98.02
PRK10942	473	serine endoprotease; Provisional	97.93
PF13365	120	Trypsin_2: Trypsin-like peptidase domain; PDB: 1Y8	97.55
PF02395	769	Peptidase_S6: Immunoglobulin A1 protease Serine pr	96.25
PF00863	235	Peptidase_C4: Peptidase family C4 This family belo	96.11
PF00947	127	Pico_P2A: Picornavirus core protein 2A; InterPro:	89.41
PF00548	172	Peptidase_C3: 3C cysteine protease (picornain 3C);	88.12
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	87.88
COG0265	347	DegQ Trypsin-like serine proteases, typically peri	82.51

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=100.00  E-value=1.6e-43  Score=315.29  Aligned_cols=228  Identities=44%  Similarity=0.844  Sum_probs=198.6

Q ss_pred             EecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCC--ceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRP--SISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~--~~~~~~v~~i  193 (388)
                      |+||.++..++|||+|.|... ..+.|+||||+++||||||||+.+.    ....+.|++|.......  ..+.+.|.++
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~~~~~~~C~GtlIs~~~VLTaAhC~~~~----~~~~~~v~~g~~~~~~~~~~~~~~~v~~~   76 (232)
T cd00190           1 IVGGSEAKIGSFPWQVSLQYTGGRHFCGGSLISPRWVLTAAHCVYSS----APSNYTVRLGSHDLSSNEGGGQVIKVKKV   76 (232)
T ss_pred             CcCCeECCCCCCCCEEEEEccCCcEEEEEEEeeCCEEEECHHhcCCC----CCccEEEEeCcccccCCCCceEEEEEEEE
Confidence            579999999999999999877 7889999999999999999999762    25678899998776542  4567899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC-CCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL-DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~-~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      +.||+|+.....+|||||+|++++.+++.++|||||.... ...+..+.++|||.......   .+..++...+.+++..
T Consensus        77 ~~hp~y~~~~~~~DiAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~g~~~~~~~---~~~~~~~~~~~~~~~~  153 (232)
T cd00190          77 IVHPNYNPSTYDNDIALLKLKRPVTLSDNVRPICLPSSGYNLPAGTTCTVSGWGRTSEGGP---LPDVLQEVNVPIVSNA  153 (232)
T ss_pred             EECCCCCCCCCcCCEEEEEECCcccCCCcccceECCCccccCCCCCEEEEEeCCcCCCCCC---CCceeeEEEeeeECHH
Confidence            9999999988899999999999999999999999998852 26678999999999776522   3678999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      +|...+..   ...+.++++|+.........|                              .|||||||++..+++++|
T Consensus       154 ~C~~~~~~---~~~~~~~~~C~~~~~~~~~~c------------------------------~gdsGgpl~~~~~~~~~l  200 (232)
T cd00190         154 ECKRAYSY---GGTITDNMLCAGGLEGGKDAC------------------------------QGDSGGPLVCNDNGRGVL  200 (232)
T ss_pred             HhhhhccC---cccCCCceEeeCCCCCCCccc------------------------------cCCCCCcEEEEeCCEEEE
Confidence            99988762   235789999998765567788                              999999999998899999


Q ss_pred             EEEEEecCCCCCCCCCeEEEeCCCchhHHhhh
Q psy13815        353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDT  384 (388)
Q Consensus       353 ~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~  384 (388)
                      +||+|++..|...+.|.+||+|+.|.+||+++
T Consensus       201 vGI~s~g~~c~~~~~~~~~t~v~~~~~WI~~~  232 (232)
T cd00190         201 VGIVSWGSGCARPNYPGVYTRVSSYLDWIQKT  232 (232)
T ss_pred             EEEEehhhccCCCCCCCEEEEcHHhhHHhhcC
Confidence            99999999998777899999999999999874

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>KOG3627|consensus

Probab=100.00  E-value=1.4e-41  Score=307.91  Aligned_cols=235  Identities=40%  Similarity=0.800  Sum_probs=197.3

Q ss_pred             CCCeEecceecCCCCcceEEEEccCC--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCC---c--e
Q psy13815        113 RTGKIVGGLAANPGEFPWIVSLKRHG--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRP---S--I  185 (388)
Q Consensus       113 ~~~~i~~g~~~~~~~~Pw~v~i~~~~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~---~--~  185 (388)
                      ...||++|.++.+++|||++++....  .+.|+|+||+++||||||||+....   .. .+.|++|.+.....   .  .
T Consensus         9 ~~~~i~~g~~~~~~~~Pw~~~l~~~~~~~~~Cggsli~~~~vltaaHC~~~~~---~~-~~~V~~G~~~~~~~~~~~~~~   84 (256)
T KOG3627|consen    9 PEGRIVGGTEAEPGSFPWQVSLQYGGNGRHLCGGSLISPRWVLTAAHCVKGAS---AS-LYTVRLGEHDINLSVSEGEEQ   84 (256)
T ss_pred             ccCCEeCCccCCCCCCCCEEEEEECCCcceeeeeEEeeCCEEEEChhhCCCCC---Cc-ceEEEECccccccccccCchh
Confidence            35799999999999999999999875  7899999999999999999998732   22 78888887644322   1  2


Q ss_pred             eeeceEEEEECCCCCCCCCC-CcEEEEEeCCCCCCCCCeeeeeCCCCCC---CCCCCeEEEEEccccCCCCCCCCCCccc
Q psy13815        186 STVPVLRIMFHPSHSCSSFN-NDIALLELTRSIQWSDLIRPACLPSGSL---DYSEQSVTVAGWGWTNENPSQGRRSNIL  261 (388)
Q Consensus       186 ~~~~v~~i~~hp~y~~~~~~-~DIALl~L~~~v~~~~~v~picLp~~~~---~~~~~~~~~~GwG~~~~~~~~~~~~~~l  261 (388)
                      ....|.+++.||+|+..... ||||||+|.+++.|++.|+|||||....   ......+.++|||.+.....  ..+..|
T Consensus        85 ~~~~v~~~i~H~~y~~~~~~~nDiall~l~~~v~~~~~i~piclp~~~~~~~~~~~~~~~v~GWG~~~~~~~--~~~~~L  162 (256)
T KOG3627|consen   85 LVGDVEKIIVHPNYNPRTLENNDIALLRLSEPVTFSSHIQPICLPSSADPYFPPGGTTCLVSGWGRTESGGG--PLPDTL  162 (256)
T ss_pred             hhceeeEEEECCCCCCCCCCCCCEEEEEECCCcccCCcccccCCCCCcccCCCCCCCEEEEEeCCCcCCCCC--CCCcee
Confidence            34557789999999998877 9999999999999999999999985543   25558899999999876511  237889


Q ss_pred             eEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCc
Q psy13815        262 QKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP  341 (388)
Q Consensus       262 ~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgP  341 (388)
                      ++..+++++..+|...+....   .+.+.|+||+...+..+.|                              +||||||
T Consensus       163 ~~~~v~i~~~~~C~~~~~~~~---~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGGP  209 (256)
T KOG3627|consen  163 QEVDVPIISNSECRRAYGGLG---TITDTMLCAGGPEGGKDAC------------------------------QGDSGGP  209 (256)
T ss_pred             EEEEEeEcChhHhcccccCcc---ccCCCEEeeCccCCCCccc------------------------------cCCCCCe
Confidence            999999999999998876321   3566789999866677889                              9999999


Q ss_pred             eEEecCCccEEEEEEEecCC-CCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        342 LMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       342 L~~~~~~~~~l~Gi~s~g~~-c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |++...++++++||+|||.. |...+.|++||+|+.|.+||++.+.
T Consensus       210 Lv~~~~~~~~~~GivS~G~~~C~~~~~P~vyt~V~~y~~WI~~~~~  255 (256)
T KOG3627|consen  210 LVCEDNGRWVLVGIVSWGSGGCGQPNYPGVYTRVSSYLDWIKENIG  255 (256)
T ss_pred             EEEeeCCcEEEEEEEEecCCCCCCCCCCeEEeEhHHhHHHHHHHhc
Confidence            99998778999999999998 9988899999999999999999875

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=100.00  E-value=1.6e-40  Score=295.73  Aligned_cols=226  Identities=45%  Similarity=0.862  Sum_probs=194.1

Q ss_pred             eEecceecCCCCcceEEEEccCC-ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCce-eeeceEEE
Q psy13815        116 KIVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSI-STVPVLRI  193 (388)
Q Consensus       116 ~i~~g~~~~~~~~Pw~v~i~~~~-~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~-~~~~v~~i  193 (388)
                      ||+||.++.+++|||+|.++... .+.|+||||++++|||||||+....    ...+.|++|......... +.+.|.++
T Consensus         1 ~~~~G~~~~~~~~Pw~~~i~~~~~~~~C~GtlIs~~~VLTaahC~~~~~----~~~~~v~~g~~~~~~~~~~~~~~v~~~   76 (229)
T smart00020        1 RIVGGSEANIGSFPWQVSLQYRGGRHFCGGSLISPRWVLTAAHCVYGSD----PSNIRVRLGSHDLSSGEEGQVIKVSKV   76 (229)
T ss_pred             CccCCCcCCCCCCCcEEEEEEcCCCcEEEEEEecCCEEEECHHHcCCCC----CcceEEEeCcccCCCCCCceEEeeEEE
Confidence            58899999999999999998776 8899999999999999999998722    467899999877654322 67899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC-CCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL-DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~-~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      +.||+|+.....+|||||+|++|+.+++.++|+|||.... ...+..+.++|||......  ......++...+.+++.+
T Consensus        77 ~~~p~~~~~~~~~DiAll~L~~~i~~~~~~~pi~l~~~~~~~~~~~~~~~~g~g~~~~~~--~~~~~~~~~~~~~~~~~~  154 (229)
T smart00020       77 IIHPNYNPSTYDNDIALLKLKSPVTLSDNVRPICLPSSNYNVPAGTTCTVSGWGRTSEGA--GSLPDTLQEVNVPIVSNA  154 (229)
T ss_pred             EECCCCCCCCCcCCEEEEEECcccCCCCceeeccCCCcccccCCCCEEEEEeCCCCCCCC--CcCCCEeeEEEEEEeCHH
Confidence            9999999888899999999999999999999999998732 2667899999999876521  123678999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      +|...+..   ...+..+++|++........|                              .|||||||++..+ +|+|
T Consensus       155 ~C~~~~~~---~~~~~~~~~C~~~~~~~~~~c------------------------------~gdsG~pl~~~~~-~~~l  200 (229)
T smart00020      155 TCRRAYSG---GGAITDNMLCAGGLEGGKDAC------------------------------QGDSGGPLVCNDG-RWVL  200 (229)
T ss_pred             Hhhhhhcc---ccccCCCcEeecCCCCCCccc------------------------------CCCCCCeeEEECC-CEEE
Confidence            99987752   235788999998765567778                              9999999999987 9999


Q ss_pred             EEEEEecCCCCCCCCCeEEEeCCCchhHH
Q psy13815        353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI  381 (388)
Q Consensus       353 ~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI  381 (388)
                      +||+|++..|...+.|.+|++|++|++||
T Consensus       201 ~Gi~s~g~~C~~~~~~~~~~~i~~~~~WI  229 (229)
T smart00020      201 VGIVSWGSGCARPGKPGVYTRVSSYLDWI  229 (229)
T ss_pred             EEEEEECCCCCCCCCCCEEEEeccccccC
Confidence            99999999998778899999999999998

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=100.00  E-value=3.1e-38  Score=279.02  Aligned_cols=216  Identities=45%  Similarity=0.860  Sum_probs=188.0

Q ss_pred             EecceecCCCCcceEEEEccCC-ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~-~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|.+.... .++|+|+||+++||||||||+..      ...+.+.+|.....  ....+.+.|.++
T Consensus         1 i~~g~~~~~~~~p~~v~i~~~~~~~~C~G~li~~~~vLTaahC~~~------~~~~~v~~g~~~~~~~~~~~~~~~v~~~   74 (220)
T PF00089_consen    1 IVGGDPASPGEFPWVVSIRYSNGRFFCTGTLISPRWVLTAAHCVDG------ASDIKVRLGTYSIRNSDGSEQTIKVSKI   74 (220)
T ss_dssp             SBSSEECGTTSSTTEEEEEETTTEEEEEEEEEETTEEEEEGGGHTS------GGSEEEEESESBTTSTTTTSEEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEeeCCCCeeEeEEeccccccccccccccc------cccccccccccccccccccccccccccc
Confidence            6799999999999999999877 89999999999999999999966      56788888874333  333478999999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      +.||+|+.....+|||||+|++++.+.+.++|+||+..... ..+..+.++||+......    ....++...+.+++.+
T Consensus        75 ~~h~~~~~~~~~~DiAll~L~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~~~~~~  150 (220)
T PF00089_consen   75 IIHPKYDPSTYDNDIALLKLDRPITFGDNIQPICLPSAGSDPNVGTSCIVVGWGRTSDNG----YSSNLQSVTVPVVSRK  150 (220)
T ss_dssp             EEETTSBTTTTTTSEEEEEESSSSEHBSSBEESBBTSTTHTTTTTSEEEEEESSBSSTTS----BTSBEEEEEEEEEEHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccccc
Confidence            99999999888999999999999999999999999984432 677899999999976543    2567999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      .|...+..     .+.+.++|++.. +..+.|                              .|||||||++...   +|
T Consensus       151 ~c~~~~~~-----~~~~~~~c~~~~-~~~~~~------------------------------~g~sG~pl~~~~~---~l  191 (220)
T PF00089_consen  151 TCRSSYND-----NLTPNMICAGSS-GSGDAC------------------------------QGDSGGPLICNNN---YL  191 (220)
T ss_dssp             HHHHHTTT-----TSTTTEEEEETT-SSSBGG------------------------------TTTTTSEEEETTE---EE
T ss_pred             cccccccc-----cccccccccccc-cccccc------------------------------cccccccccccee---ee
Confidence            99987541     378899999876 567888                              9999999999886   89


Q ss_pred             EEEEEecCCCCCCCCCeEEEeCCCchhHH
Q psy13815        353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI  381 (388)
Q Consensus       353 ~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI  381 (388)
                      +||++++..|...+.|.+|++|+.|++||
T Consensus       192 vGI~s~~~~c~~~~~~~v~~~v~~~~~WI  220 (220)
T PF00089_consen  192 VGIVSFGENCGSPNYPGVYTRVSSYLDWI  220 (220)
T ss_dssp             EEEEEEESSSSBTTSEEEEEEGGGGHHHH
T ss_pred             cceeeecCCCCCCCcCEEEEEHHHhhccC
Confidence            99999999999888899999999999999

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=99.98  E-value=2e-31  Score=235.29  Aligned_cols=239  Identities=31%  Similarity=0.508  Sum_probs=178.0

Q ss_pred             CCCeEecceecCCCCcceEEEEccCC-----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceee
Q psy13815        113 RTGKIVGGLAANPGEFPWIVSLKRHG-----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSIST  187 (388)
Q Consensus       113 ~~~~i~~g~~~~~~~~Pw~v~i~~~~-----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~  187 (388)
                      .+.||+||..++.++||++|.+....     ..+|||+++..|||||||||+.... +......+|..+-.+...  .+.
T Consensus        29 vs~rIigGs~Anag~~P~~VaLv~~isd~~s~tfCGgs~l~~RYvLTAAHC~~~~s-~is~d~~~vv~~l~d~Sq--~~r  105 (413)
T COG5640          29 VSSRIIGGSNANAGEYPSLVALVDRISDYVSGTFCGGSKLGGRYVLTAAHCADASS-PISSDVNRVVVDLNDSSQ--AER  105 (413)
T ss_pred             cceeEecCcccccccCchHHHHHhhcccccceeEeccceecceEEeeehhhccCCC-CccccceEEEeccccccc--ccC
Confidence            46799999999999999999986542     4689999999999999999998754 455566666666655543  345


Q ss_pred             eceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCC-CeeeeeCCC--CCCCCCCCeEEEEEccccCCCCCCCCCC--ccce
Q psy13815        188 VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSD-LIRPACLPS--GSLDYSEQSVTVAGWGWTNENPSQGRRS--NILQ  262 (388)
Q Consensus       188 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~-~v~picLp~--~~~~~~~~~~~~~GwG~~~~~~~~~~~~--~~l~  262 (388)
                      ..|..++.|..|...++.||+|+++|+++..+.. .+.-.--+.  .............+|+.+.........+  ..++
T Consensus       106 g~vr~i~~~efY~~~n~~ND~Av~~l~~~a~~pr~ki~~~~~sdt~l~sv~~~s~~~n~t~~~~~~~~v~~~~p~gt~l~  185 (413)
T COG5640         106 GHVRTIYVHEFYSPGNLGNDIAVLELARAASLPRVKITSFDASDTFLNSVTTVSPMTNGTFGVTTPSDVPRSSPKGTILH  185 (413)
T ss_pred             cceEEEeeecccccccccCcceeeccccccccchhheeeccCcccceecccccccccceeeeeeeecCCCCCCCccceee
Confidence            6799999999999999999999999998765321 111000011  0000233445667777766543322222  4799


Q ss_pred             EEEEEeechhhhhhHhhc-CCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCc
Q psy13815        263 KVALSVVSNQVCQAWYQS-EGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP  341 (388)
Q Consensus       263 ~~~~~i~~~~~C~~~~~~-~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgP  341 (388)
                      +..+..++...|...+.. ........-.-+|++..  ..+.|                              +||||||
T Consensus       186 e~~v~fv~~stc~~~~g~an~~dg~~~lT~~cag~~--~~daC------------------------------qGDSGGP  233 (413)
T COG5640         186 EVAVLFVPLSTCAQYKGCANASDGATGLTGFCAGRP--PKDAC------------------------------QGDSGGP  233 (413)
T ss_pred             eeeeeeechHHhhhhccccccCCCCCCccceecCCC--Ccccc------------------------------cCCCCCc
Confidence            999999999999987741 11112222334999865  38888                              9999999


Q ss_pred             eEEecCCccEEEEEEEecCC-CCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        342 LMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       342 L~~~~~~~~~l~Gi~s~g~~-c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ++.+.+....++||+|||.+ |+.+..|.|||+|+.|-+||...++
T Consensus       234 i~~~g~~G~vQ~GVvSwG~~~Cg~t~~~gVyT~vsny~~WI~a~~~  279 (413)
T COG5640         234 IFHKGEEGRVQRGVVSWGDGGCGGTLIPGVYTNVSNYQDWIAAMTN  279 (413)
T ss_pred             eEEeCCCccEEEeEEEecCCCCCCCCcceeEEehhHHHHHHHHHhc
Confidence            99999888899999999986 9999999999999999999998764

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=99.69  E-value=1.2e-15  Score=139.91  Aligned_cols=220  Identities=24%  Similarity=0.424  Sum_probs=141.9

Q ss_pred             CCCCCCccCCCCCeEecceecCCCCcceEEEEccCC----ceeEEEEEeeCCEEEecCcCCCCCCCCC----c-------
Q psy13815        103 VPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG----GHFCGGTIIHEQWIVTAAHCLCNGPSPL----S-------  167 (388)
Q Consensus       103 ~~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~~~----~~~C~GtLI~~~~VLTAAhCv~~~~~~~----~-------  167 (388)
                      ..||.... +...++.+|..+..++.||++.+...+    ...++|||||+||||||+||+.+....+    .       
T Consensus        29 ~~CG~~~~-~~~~~~~~g~~~~~~~~pW~v~v~~~~~~~~~~~~~gtlIS~RHiLtss~~~~~~~~~W~~~~~~~~~~C~  107 (282)
T PF03761_consen   29 ETCGKKKL-PYPSKVFNGTPAESGEAPWAVSVYTKNHNEGNYFSTGTLISPRHILTSSHCVMNDKSKWLNGEEFDNKKCE  107 (282)
T ss_pred             HhcCCCCC-CCcccccCCcccccCCCCCEEEEEeccCcccceecceEEeccCeEEEeeeEEEecccccccCcccccceee
Confidence            47995432 234567899999999999999997654    3567999999999999999997532211    0       


Q ss_pred             c--ceEEEEe---ccccC------CCCceeeeceEEEEECCC----CCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCC
Q psy13815        168 A--SQINVTL---KEHDL------SRPSISTVPVLRIMFHPS----HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS  232 (388)
Q Consensus       168 ~--~~~~v~~---g~~~~------~~~~~~~~~v~~i~~hp~----y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~  232 (388)
                      .  ..+.|.-   .....      ........++.++++--.    ........+++||+|+++  +.....|+|||...
T Consensus       108 ~~~~~l~vP~~~l~~~~v~~~~~~~~~~~~~~~v~ka~il~~C~~~~~~~~~~~~~mIlEl~~~--~~~~~~~~Cl~~~~  185 (282)
T PF03761_consen  108 GNNNHLIVPEEVLSKIDVRCCNCFSNGKCFSIKVKKAYILNGCKKIKKNFNRPYSPMILELEED--FSKNVSPPCLADSS  185 (282)
T ss_pred             CCCceEEeCHHHhccEEEEeecccccCCcccceeEEEEEEecCCCcccccccccceEEEEEccc--ccccCCCEEeCCCc
Confidence            0  0111100   00000      011112345555555211    122344579999999999  67889999999876


Q ss_pred             CC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccC
Q psy13815        233 LD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWW  311 (388)
Q Consensus       233 ~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~  311 (388)
                      .. ..++.+.+.|+    ..      ...+...++.+.....|              ...+|     .....|       
T Consensus       186 ~~~~~~~~~~~yg~----~~------~~~~~~~~~~i~~~~~~--------------~~~~~-----~~~~~~-------  229 (282)
T PF03761_consen  186 TNWEKGDEVDVYGF----NS------TGKLKHRKLKITNCTKC--------------AYSIC-----TKQYSC-------  229 (282)
T ss_pred             cccccCceEEEeec----CC------CCeEEEEEEEEEEeecc--------------ceeEe-----cccccC-------
Confidence            64 45566666666    11      33466666665443221              11222     234556       


Q ss_pred             CcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        312 TPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                                             .+|+||||+...+++++|+||.+.+. .|..  ....|.+|..|.+=|-+.++
T Consensus       230 -----------------------~~d~Gg~lv~~~~gr~tlIGv~~~~~~~~~~--~~~~f~~v~~~~~~IC~ltG  280 (282)
T PF03761_consen  230 -----------------------KGDRGGPLVKNINGRWTLIGVGASGNYECNK--NNSYFFNVSWYQDEICELTG  280 (282)
T ss_pred             -----------------------CCCccCeEEEEECCCEEEEEEEccCCCcccc--cccEEEEHHHhhhhhcccee
Confidence                                   99999999999999999999998775 4432  25789999999888776654

>PF09342 DUF1986: Domain of unknown function (DUF1986); InterPro: IPR015420 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.54  E-value=3e-13  Score=114.77  Aligned_cols=114  Identities=20%  Similarity=0.417  Sum_probs=89.8

Q ss_pred             CCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccC----CCCceeeeceEEEEECCCCC
Q psy13815        125 PGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL----SRPSISTVPVLRIMFHPSHS  200 (388)
Q Consensus       125 ~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~----~~~~~~~~~v~~i~~hp~y~  200 (388)
                      ...|||.|.|+.++.+.|+|+||+++|||++..|+.+.  ......+.+.+|....    ..+.+|.+.|..+..=|   
T Consensus        13 ~y~WPWlA~IYvdG~~~CsgvLlD~~WlLvsssCl~~I--~L~~~YvsallG~~Kt~~~v~Gp~EQI~rVD~~~~V~---   87 (267)
T PF09342_consen   13 DYHWPWLADIYVDGRYWCSGVLLDPHWLLVSSSCLRGI--SLSHHYVSALLGGGKTYLSVDGPHEQISRVDCFKDVP---   87 (267)
T ss_pred             cccCcceeeEEEcCeEEEEEEEeccceEEEeccccCCc--ccccceEEEEecCcceecccCCChheEEEeeeeeecc---
Confidence            35699999999999999999999999999999999762  2445667888886653    25666766666554433   


Q ss_pred             CCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccc
Q psy13815        201 CSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGW  247 (388)
Q Consensus       201 ~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~  247 (388)
                          ..+++||+|++|+.|+.+|+|..||..... .....|..+|-..
T Consensus        88 ----~S~v~LLHL~~~~~fTr~VlP~flp~~~~~~~~~~~CVAVg~d~  131 (267)
T PF09342_consen   88 ----ESNVLLLHLEQPANFTRYVLPTFLPETSNENESDDECVAVGHDD  131 (267)
T ss_pred             ----ccceeeeeecCcccceeeecccccccccCCCCCCCceEEEEccc
Confidence                368999999999999999999999974433 4556898888543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found in serine endopeptidases belonging to MEROPS peptidase family S1A (clan PA). It is found in unusual mosaic proteins, which are encoded by the Drosophila nudel gene (see P98159 from SWISSPROT). Nudel is involved in defining embryonic dorsoventral polarity. Three proteases; ndl, gd and snk process easter to create active easter. Active easter defines cell identities along the dorsal-ventral continuum by activating the spz ligand for the Tl receptor in the ventral region of the embryo. Nudel, pipe and windbeutel together trigger the protease cascade within the extraembryonic perivitelline compartment which induces dorsoventral polarity of the Drosophila embryo [].

>KOG3627|consensus

Probab=99.36  E-value=7.4e-13  Score=119.81  Aligned_cols=89  Identities=34%  Similarity=0.607  Sum_probs=73.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-CC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-SP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~--   78 (388)
                      .+..||++++++++..+|+..+....   .+++.||||+......++|+|||||||++..+.+|+++||+|||.+ |.  
T Consensus       158 ~~~~L~~~~v~i~~~~~C~~~~~~~~---~~~~~~~Ca~~~~~~~~~C~GDSGGPLv~~~~~~~~~~GivS~G~~~C~~~  234 (256)
T KOG3627|consen  158 LPDTLQEVDVPIISNSECRRAYGGLG---TITDTMLCAGGPEGGKDACQGDSGGPLVCEDNGRWVLVGIVSWGSGGCGQP  234 (256)
T ss_pred             CCceeEEEEEeEcChhHhcccccCcc---ccCCCEEeeCccCCCCccccCCCCCeEEEeeCCcEEEEEEEEecCCCCCCC
Confidence            47789999999999999998876421   2566789999755667899999999999988778999999999988 83  


Q ss_pred             ---c--eeeEEEEeeccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~   93 (388)
                         +  ++++.|.+||.+.+
T Consensus       235 ~~P~vyt~V~~y~~WI~~~~  254 (256)
T KOG3627|consen  235 NYPGVYTRVSSYLDWIKENI  254 (256)
T ss_pred             CCCeEEeEhHHhHHHHHHHh
Confidence               2  77788999998654

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=99.15  E-value=7e-11  Score=104.76  Aligned_cols=87  Identities=34%  Similarity=0.618  Sum_probs=72.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT--   79 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~--   79 (388)
                      .+..|++.++.+++..+|...+..   ...+.+.++|++......+.|.|||||||++..+++|+|+||+|++..|..  
T Consensus       138 ~~~~~~~~~~~~~~~~~C~~~~~~---~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~lvGI~s~g~~c~~~~  214 (232)
T cd00190         138 LPDVLQEVNVPIVSNAECKRAYSY---GGTITDNMLCAGGLEGGKDACQGDSGGPLVCNDNGRGVLVGIVSWGSGCARPN  214 (232)
T ss_pred             CCceeeEEEeeeECHHHhhhhccC---cccCCCceEeeCCCCCCCccccCCCCCcEEEEeCCEEEEEEEEehhhccCCCC
Confidence            356799999999999999987753   115789999998654467899999999999988899999999999987841  


Q ss_pred             -----eeeEEEEeeccc
Q psy13815         80 -----SVVQLLTRWTLD   91 (388)
Q Consensus        80 -----~~~~~~~~wi~~   91 (388)
                           +++..|.+||.+
T Consensus       215 ~~~~~t~v~~~~~WI~~  231 (232)
T cd00190         215 YPGVYTRVSSYLDWIQK  231 (232)
T ss_pred             CCCEEEEcHHhhHHhhc
Confidence                 778889999975

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>COG3591 V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]

Probab=99.09  E-value=1.6e-09  Score=94.62  Aligned_cols=200  Identities=19%  Similarity=0.277  Sum_probs=111.4

Q ss_pred             CCCCcceEEEEccC---CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEe-ccccCCCCceeeeceEEEEECCC-
Q psy13815        124 NPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL-KEHDLSRPSISTVPVLRIMFHPS-  198 (388)
Q Consensus       124 ~~~~~Pw~v~i~~~---~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~v~~i~~hp~-  198 (388)
                      +-..|||-+.....   +..-|+++||+++.||||+||+.+...  ....+.+.. |......+.. .+........|. 
T Consensus        45 dt~~~Py~av~~~~~~tG~~~~~~~lI~pntvLTa~Hc~~s~~~--G~~~~~~~p~g~~~~~~~~~-~~~~~~~~~~~g~  121 (251)
T COG3591          45 DTTQFPYSAVVQFEAATGRLCTAATLIGPNTVLTAGHCIYSPDY--GEDDIAAAPPGVNSDGGPFY-GITKIEIRVYPGE  121 (251)
T ss_pred             cCCCCCcceeEEeecCCCcceeeEEEEcCceEEEeeeEEecCCC--ChhhhhhcCCcccCCCCCCC-ceeeEEEEecCCc
Confidence            45679996665432   345577799999999999999987432  112222222 3322222111 122222222333 


Q ss_pred             -CCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhH
Q psy13815        199 -HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAW  277 (388)
Q Consensus       199 -y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~  277 (388)
                       |.......|+..+.|+....+.+.+....++.......++...++||-......      ..+.+..-++.        
T Consensus       122 ~~~~d~~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~i~v~GYP~dk~~~------~~~~e~t~~v~--------  187 (251)
T COG3591         122 LYKEDGASYDVGEAALESGINIGDVVNYLKRNTASEAKANDRITVIGYPGDKPNI------GTMWESTGKVN--------  187 (251)
T ss_pred             eeccCCceeeccHHHhccCCCccccccccccccccccccCceeEEEeccCCCCcc------eeEeeecceeE--------
Confidence             344555567777777755566666665555544444455558888885433211      01111111110        


Q ss_pred             hhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEE
Q psy13815        278 YQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVS  357 (388)
Q Consensus       278 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s  357 (388)
                              .+....+-     -..+.+                              .|+||+|++...+   +++||..
T Consensus       188 --------~~~~~~l~-----y~~dT~------------------------------pG~SGSpv~~~~~---~vigv~~  221 (251)
T COG3591         188 --------SIKGNKLF-----YDADTL------------------------------PGSSGSPVLISKD---EVIGVHY  221 (251)
T ss_pred             --------EEecceEE-----EEeccc------------------------------CCCCCCceEecCc---eEEEEEe
Confidence                    01111110     123555                              9999999998776   8999999


Q ss_pred             ecCCCCCCCCCeEEEeCCC-chhHHhhhhc
Q psy13815        358 TGIGCARPRLPGLYTRLTR-YIGWISDTLD  386 (388)
Q Consensus       358 ~g~~c~~~~~p~v~t~V~~-~~~WI~~~i~  386 (388)
                      -+..-.........+|+.. +++||++.++
T Consensus       222 ~g~~~~~~~~~n~~vr~t~~~~~~I~~~~~  251 (251)
T COG3591         222 NGPGANGGSLANNAVRLTPEILNFIQQNIK  251 (251)
T ss_pred             cCCCcccccccCcceEecHHHHHHHHHhhC
Confidence            8875332233445566654 7799998764

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=98.94  E-value=2.5e-09  Score=95.95  Aligned_cols=92  Identities=32%  Similarity=0.483  Sum_probs=72.2

Q ss_pred             cCceEEEEeeeChhhhHhhhh-cCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-CCc--
Q psy13815          4 NILQKVALSVVSNQVCQAWYQ-SEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-SPT--   79 (388)
Q Consensus         4 ~~L~~~~~~v~~~~~C~~~~~-~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~~--   79 (388)
                      ..|++..+..++.++|+..++ .++......-.-+||+...  +++|+||||||++...+...+++||+|||.+ |..  
T Consensus       182 t~l~e~~v~fv~~stc~~~~g~an~~dg~~~lT~~cag~~~--~daCqGDSGGPi~~~g~~G~vQ~GVvSwG~~~Cg~t~  259 (413)
T COG5640         182 TILHEVAVLFVPLSTCAQYKGCANASDGATGLTGFCAGRPP--KDACQGDSGGPIFHKGEEGRVQRGVVSWGDGGCGGTL  259 (413)
T ss_pred             ceeeeeeeeeechHHhhhhccccccCCCCCCccceecCCCC--cccccCCCCCceEEeCCCccEEEeEEEecCCCCCCCC
Confidence            479999999999999998775 2222111222239999653  8999999999999998888899999999987 832  


Q ss_pred             -----eeeEEEEeeccccccCCC
Q psy13815         80 -----SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        80 -----~~~~~~~~wi~~~~~~~~   97 (388)
                           |+++.|.+||...+....
T Consensus       260 ~~gVyT~vsny~~WI~a~~~~l~  282 (413)
T COG5640         260 IPGVYTNVSNYQDWIAAMTNGLS  282 (413)
T ss_pred             cceeEEehhHHHHHHHHHhcCCC
Confidence                 889999999998776543

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=98.88  E-value=7.4e-09  Score=91.71  Aligned_cols=83  Identities=36%  Similarity=0.651  Sum_probs=69.4

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      +..|+.+++.+++.++|...+...   ..+.+.++|++........|.||||+||++..+ +|+++||+|++..|.    
T Consensus       140 ~~~~~~~~~~~~~~~~C~~~~~~~---~~~~~~~~C~~~~~~~~~~c~gdsG~pl~~~~~-~~~l~Gi~s~g~~C~~~~~  215 (229)
T smart00020      140 PDTLQEVNVPIVSNATCRRAYSGG---GAITDNMLCAGGLEGGKDACQGDSGGPLVCNDG-RWVLVGIVSWGSGCARPGK  215 (229)
T ss_pred             CCEeeEEEEEEeCHHHhhhhhccc---cccCCCcEeecCCCCCCcccCCCCCCeeEEECC-CEEEEEEEEECCCCCCCCC
Confidence            457899999999999999876531   246889999986543678899999999999877 999999999999885    


Q ss_pred             ---ceeeEEEEeec
Q psy13815         79 ---TSVVQLLTRWT   89 (388)
Q Consensus        79 ---~~~~~~~~~wi   89 (388)
                         .+++..|.+||
T Consensus       216 ~~~~~~i~~~~~WI  229 (229)
T smart00020      216 PGVYTRVSSYLDWI  229 (229)
T ss_pred             CCEEEEeccccccC
Confidence               17888899997

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.67  E-value=2.5e-08  Score=87.53  Aligned_cols=78  Identities=37%  Similarity=0.673  Sum_probs=64.4

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      ++.++...+.+++...|...+..     .+.+.++|++.. ...+.|.||||+||++...   +|+||++++..|..   
T Consensus       136 ~~~~~~~~~~~~~~~~c~~~~~~-----~~~~~~~c~~~~-~~~~~~~g~sG~pl~~~~~---~lvGI~s~~~~c~~~~~  206 (220)
T PF00089_consen  136 SSNLQSVTVPVVSRKTCRSSYND-----NLTPNMICAGSS-GSGDACQGDSGGPLICNNN---YLVGIVSFGENCGSPNY  206 (220)
T ss_dssp             TSBEEEEEEEEEEHHHHHHHTTT-----TSTTTEEEEETT-SSSBGGTTTTTSEEEETTE---EEEEEEEEESSSSBTTS
T ss_pred             ccccccccccccccccccccccc-----cccccccccccc-cccccccccccccccccee---eecceeeecCCCCCCCc
Confidence            35789999999999999987554     467899999864 5578999999999999874   79999999988832   


Q ss_pred             ----eeeEEEEeec
Q psy13815         80 ----SVVQLLTRWT   89 (388)
Q Consensus        80 ----~~~~~~~~wi   89 (388)
                          ++++.|.+||
T Consensus       207 ~~v~~~v~~~~~WI  220 (220)
T PF00089_consen  207 PGVYTRVSSYLDWI  220 (220)
T ss_dssp             EEEEEEGGGGHHHH
T ss_pred             CEEEEEHHHhhccC
Confidence                6677777886

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>TIGR02037 degP_htrA_DO periplasmic serine protease, Do/DeqQ family

Probab=98.39  E-value=5.7e-06  Score=80.49  Aligned_cols=85  Identities=22%  Similarity=0.249  Sum_probs=60.0

Q ss_pred             ceeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCC
Q psy13815        139 GHFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSI  217 (388)
Q Consensus       139 ~~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v  217 (388)
                      ...++|.+|+++ +|||++|.+.+      ...+.|.+...       ..+..+-+..++       ..|||||+++.+ 
T Consensus        57 ~~~GSGfii~~~G~IlTn~Hvv~~------~~~i~V~~~~~-------~~~~a~vv~~d~-------~~DlAllkv~~~-  115 (428)
T TIGR02037        57 RGLGSGVIISADGYILTNNHVVDG------ADEITVTLSDG-------REFKAKLVGKDP-------RTDIAVLKIDAK-  115 (428)
T ss_pred             cceeeEEEECCCCEEEEcHHHcCC------CCeEEEEeCCC-------CEEEEEEEEecC-------CCCEEEEEecCC-
Confidence            457999999986 99999999976      45666665421       234444333444       369999999865 


Q ss_pred             CCCCCeeeeeCCCCCCCCCCCeEEEEEccc
Q psy13815        218 QWSDLIRPACLPSGSLDYSEQSVTVAGWGW  247 (388)
Q Consensus       218 ~~~~~v~picLp~~~~~~~~~~~~~~GwG~  247 (388)
                         ..+.++.|........++.++++|+..
T Consensus       116 ---~~~~~~~l~~~~~~~~G~~v~aiG~p~  142 (428)
T TIGR02037       116 ---KNLPVIKLGDSDKLRVGDWVLAIGNPF  142 (428)
T ss_pred             ---CCceEEEccCCCCCCCCCEEEEEECCC
Confidence               345677787654447889999999854

This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures.

>TIGR02038 protease_degS periplasmic serine pepetdase DegS

Probab=98.31  E-value=3.2e-05  Score=72.96  Aligned_cols=83  Identities=19%  Similarity=0.241  Sum_probs=55.8

Q ss_pred             eeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        140 HFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       140 ~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ...+|.+|+++ +|||++|.+.+      .+.+.|.+.+.       ..++.+-+..+|       ..||||||++.+- 
T Consensus        78 ~~GSG~vi~~~G~IlTn~HVV~~------~~~i~V~~~dg-------~~~~a~vv~~d~-------~~DlAvlkv~~~~-  136 (351)
T TIGR02038        78 GLGSGVIMSKEGYILTNYHVIKK------ADQIVVALQDG-------RKFEAELVGSDP-------LTDLAVLKIEGDN-  136 (351)
T ss_pred             ceEEEEEEeCCeEEEecccEeCC------CCEEEEEECCC-------CEEEEEEEEecC-------CCCEEEEEecCCC-
Confidence            46999999977 99999999966      45566665421       234444444444       4699999998542 


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEccc
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGWGW  247 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~GwG~  247 (388)
                          +.++.|........++.+.++|+..
T Consensus       137 ----~~~~~l~~s~~~~~G~~V~aiG~P~  161 (351)
T TIGR02038       137 ----LPTIPVNLDRPPHVGDVVLAIGNPY  161 (351)
T ss_pred             ----CceEeccCcCccCCCCEEEEEeCCC
Confidence                3445554333337889999999854

This family consists of the periplasmic serine protease DegS (HhoB), a shorter paralog of protease DO (HtrA, DegP) and DegQ (HhoA). It is found in E. coli and several other Proteobacteria of the gamma subdivision. It contains a trypsin domain and a single copy of PDZ domain (in contrast to DegP with two copies). A critical role of this DegS is to sense stress in the periplasm and partially degrade an inhibitor of sigma(E).

>PRK10898 serine endoprotease; Provisional

Probab=98.23  E-value=5.7e-05  Score=71.31  Aligned_cols=83  Identities=19%  Similarity=0.283  Sum_probs=55.3

Q ss_pred             eeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        140 HFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       140 ~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ..-+|.+|+++ +|||++|=+.+      ...+.|.+.+.       ..+..+-+..+|       .+||||||++..  
T Consensus        78 ~~GSGfvi~~~G~IlTn~HVv~~------a~~i~V~~~dg-------~~~~a~vv~~d~-------~~DlAvl~v~~~--  135 (353)
T PRK10898         78 TLGSGVIMDQRGYILTNKHVIND------ADQIIVALQDG-------RVFEALLVGSDS-------LTDLAVLKINAT--  135 (353)
T ss_pred             ceeeEEEEeCCeEEEecccEeCC------CCEEEEEeCCC-------CEEEEEEEEEcC-------CCCEEEEEEcCC--
Confidence            57999999976 99999999965      45667766431       234443344444       379999999754  


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEccc
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGWGW  247 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~GwG~  247 (388)
                         ...++.|........++.+.++|+..
T Consensus       136 ---~l~~~~l~~~~~~~~G~~V~aiG~P~  161 (353)
T PRK10898        136 ---NLPVIPINPKRVPHIGDVVLAIGNPY  161 (353)
T ss_pred             ---CCCeeeccCcCcCCCCCEEEEEeCCC
Confidence               13444454433336788889888753

>PRK10139 serine endoprotease; Provisional

Probab=98.02  E-value=0.00022  Score=69.53  Aligned_cols=84  Identities=18%  Similarity=0.240  Sum_probs=58.3

Q ss_pred             ceeEEEEEeeC--CEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        139 GHFCGGTIIHE--QWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       139 ~~~C~GtLI~~--~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      ....+|.+|++  -+|||.+|.+.+      ...+.|.+.+.       ..++.+-+...|       ..||||||++.+
T Consensus        89 ~~~GSG~ii~~~~g~IlTn~HVv~~------a~~i~V~~~dg-------~~~~a~vvg~D~-------~~DlAvlkv~~~  148 (455)
T PRK10139         89 EGLGSGVIIDAAKGYVLTNNHVINQ------AQKISIQLNDG-------REFDAKLIGSDD-------QSDIALLQIQNP  148 (455)
T ss_pred             cceEEEEEEECCCCEEEeChHHhCC------CCEEEEEECCC-------CEEEEEEEEEcC-------CCCEEEEEecCC
Confidence            35799999974  599999999976      46677776432       234444444444       479999999854


Q ss_pred             CCCCCCeeeeeCCCCCCCCCCCeEEEEEcc
Q psy13815        217 IQWSDLIRPACLPSGSLDYSEQSVTVAGWG  246 (388)
Q Consensus       217 v~~~~~v~picLp~~~~~~~~~~~~~~GwG  246 (388)
                      -    ...++.|........++.+.++|+.
T Consensus       149 ~----~l~~~~lg~s~~~~~G~~V~aiG~P  174 (455)
T PRK10139        149 S----KLTQIAIADSDKLRVGDFAVAVGNP  174 (455)
T ss_pred             C----CCceeEecCccccCCCCEEEEEecC
Confidence            2    3456777655444678999999874

>PRK10942 serine endoprotease; Provisional

Probab=97.93  E-value=0.00035  Score=68.55  Aligned_cols=84  Identities=21%  Similarity=0.258  Sum_probs=56.9

Q ss_pred             ceeEEEEEeeC--CEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        139 GHFCGGTIIHE--QWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       139 ~~~C~GtLI~~--~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      ....+|.+|+.  -+|||.+|.+.+      ...+.|.+.+.       ..+..+-+..+|       ..||||||++.+
T Consensus       110 ~~~GSG~ii~~~~G~IlTn~HVv~~------a~~i~V~~~dg-------~~~~a~vv~~D~-------~~DlAvlki~~~  169 (473)
T PRK10942        110 MALGSGVIIDADKGYVVTNNHVVDN------ATKIKVQLSDG-------RKFDAKVVGKDP-------RSDIALIQLQNP  169 (473)
T ss_pred             cceEEEEEEECCCCEEEeChhhcCC------CCEEEEEECCC-------CEEEEEEEEecC-------CCCEEEEEecCC
Confidence            34799999985  499999999976      45677776432       234444344444       479999999743


Q ss_pred             CCCCCCeeeeeCCCCCCCCCCCeEEEEEcc
Q psy13815        217 IQWSDLIRPACLPSGSLDYSEQSVTVAGWG  246 (388)
Q Consensus       217 v~~~~~v~picLp~~~~~~~~~~~~~~GwG  246 (388)
                      -    ...++.|........++.++++|+-
T Consensus       170 ~----~l~~~~lg~s~~l~~G~~V~aiG~P  195 (473)
T PRK10942        170 K----NLTAIKMADSDALRVGDYTVAIGNP  195 (473)
T ss_pred             C----CCceeEecCccccCCCCEEEEEcCC
Confidence            2    2456666654444678888888864

>PF13365 Trypsin_2: Trypsin-like peptidase domain; PDB: 1Y8T_A 2Z9I_A 3QO6_A 1L1J_A 1QY6_A 2O8L_A 3OTP_E 2ZLE_I 1KY9_A 3CS0_A

Probab=97.55  E-value=0.00027  Score=55.46  Aligned_cols=60  Identities=28%  Similarity=0.455  Sum_probs=35.3

Q ss_pred             EEEEEeeCC-EEEecCcCCCCCCCCC--ccceEEEEeccccCCCCceeeec--eEEEEECCCCCCCCCCCcEEEEEeC
Q psy13815        142 CGGTIIHEQ-WIVTAAHCLCNGPSPL--SASQINVTLKEHDLSRPSISTVP--VLRIMFHPSHSCSSFNNDIALLELT  214 (388)
Q Consensus       142 C~GtLI~~~-~VLTAAhCv~~~~~~~--~~~~~~v~~g~~~~~~~~~~~~~--v~~i~~hp~y~~~~~~~DIALl~L~  214 (388)
                      |+|.+|.++ +|||++||+.+.....  ....+.+......       ...  ..-+...+.      ..|+|||+++
T Consensus         1 GTGf~i~~~g~ilT~~Hvv~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~------~~D~All~v~   65 (120)
T PF13365_consen    1 GTGFLIGPDGYILTAAHVVEDWNDGKQPDNSSVEVVFPDGR-------RVPPVAEVVYFDPD------DYDLALLKVD   65 (120)
T ss_dssp             EEEEEEETTTEEEEEHHHHTCCTT--G-TCSEEEEEETTSC-------EEETEEEEEEEETT-------TTEEEEEES
T ss_pred             CEEEEEcCCceEEEchhheecccccccCCCCEEEEEecCCC-------EEeeeEEEEEECCc------cccEEEEEEe
Confidence            789999999 9999999998633221  2333333332211       111  222223322      4799999999

...

>PF02395 Peptidase_S6: Immunoglobulin A1 protease Serine protease Prosite pattern; InterPro: IPR000710 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.25  E-value=0.01  Score=61.11  Aligned_cols=65  Identities=22%  Similarity=0.280  Sum_probs=37.8

Q ss_pred             EEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCe
Q psy13815        144 GTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI  223 (388)
Q Consensus       144 GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v  223 (388)
                      .|||+|++|+|++|=...        .-.|.+|....     ..+.+..--.|+.       .|..+-||.+=|.   .+
T Consensus        69 aTLigpqYiVSV~HN~~g--------y~~v~FG~~g~-----~~Y~iV~RNn~~~-------~Df~~pRLnK~VT---Ev  125 (769)
T PF02395_consen   69 ATLIGPQYIVSVKHNGKG--------YNSVSFGNEGQ-----NTYKIVDRNNYPS-------GDFHMPRLNKFVT---EV  125 (769)
T ss_dssp             -EEEETTEEEBETTG-TS--------CCEECESCSST-----CEEEEEEEEBETT-------STEBEEEESS------SS
T ss_pred             EEEecCCeEEEEEccCCC--------cCceeecccCC-----ceEEEEEccCCCC-------cccceeecCceEE---EE
Confidence            899999999999998722        12456665322     3455555555543       5999999998665   46


Q ss_pred             eeeeCCCC
Q psy13815        224 RPACLPSG  231 (388)
Q Consensus       224 ~picLp~~  231 (388)
                      .|+.....
T Consensus       126 aP~~~t~~  133 (769)
T PF02395_consen  126 APAEMTTA  133 (769)
T ss_dssp             ----BBSS
T ss_pred             eccccccc
Confidence            77666544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S6 (clan PA(S)). The type sample being the IgA1-specific serine endopeptidase from Neisseria gonorrhoeae []. These cleave prolyl bonds in the hinge regions of immunoglobulin A heavy chains. Similar specificity is shown by the unrelated family of M26 metalloendopeptidases.; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3SZE_A 3H09_B 3SYJ_A 1WXR_A 3AK5_B.

>PF00863 Peptidase_C4: Peptidase family C4 This family belongs to family C4 of the peptidase classification

Probab=96.11  E-value=0.13  Score=45.11  Aligned_cols=43  Identities=16%  Similarity=0.299  Sum_probs=25.8

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCC-chhHHh
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTR-YIGWIS  382 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~-~~~WI~  382 (388)
                      .||=|.||+...++  .+|||.|-+..-.   .-.+|+.+.. +.+-+.
T Consensus       150 ~G~CG~PlVs~~Dg--~IVGiHsl~~~~~---~~N~F~~f~~~f~~~~l  193 (235)
T PF00863_consen  150 DGDCGLPLVSTKDG--KIVGIHSLTSNTS---SRNYFTPFPDDFEEFYL  193 (235)
T ss_dssp             TT-TT-EEEETTT----EEEEEEEEETTT---SSEEEEE--TTHHHHHC
T ss_pred             CCccCCcEEEcCCC--cEEEEEcCccCCC---CeEEEEcCCHHHHHHHh
Confidence            67779999998776  4999999765332   2358888765 444443

; InterPro: IPR001730 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. Nuclear inclusion A (NIA) proteases from potyviruses are cysteine peptidases belong to the MEROPS peptidase family C4 (NIa protease family, clan PA(C)) [, ]. Potyviruses include plant viruses in which the single-stranded RNA encodes a polyprotein with NIA protease activity, where proteolytic cleavage is specific for Gln+Gly sites. The NIA protease acts on the polyprotein, releasing itself by Gln+Gly cleavage at both the N- and C-termini. It further processes the polyprotein by cleavage at five similar sites in the C-terminal half of the sequence. In addition to its C-terminal protease activity, the NIA protease contains an N-terminal domain that has been implicated in the transcription process []. This peptidase is present in the nuclear inclusion protein of potyviruses.; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 3MMG_B 1Q31_B 1LVB_A 1LVM_A.

>PF00947 Pico_P2A: Picornavirus core protein 2A; InterPro: IPR000081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=89.41  E-value=0.52  Score=36.76  Aligned_cols=38  Identities=26%  Similarity=0.482  Sum_probs=29.0

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHh
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS  382 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~  382 (388)
                      +||-||+|.|+.+    ++||++.|-.     .-.-|++|+.+. |++
T Consensus        89 PGdCGg~L~C~HG----ViGi~Tagg~-----g~VaF~dir~~~-~~e  126 (127)
T PF00947_consen   89 PGDCGGILRCKHG----VIGIVTAGGE-----GHVAFADIRDLL-WLE  126 (127)
T ss_dssp             TT-TCSEEEETTC----EEEEEEEEET-----TEEEEEECCCGS-TTS
T ss_pred             CCCCCceeEeCCC----eEEEEEeCCC-----ceEEEEechhhh-eec
Confidence            8999999999998    9999998732     235799998763 443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This domain defines cysteine peptidases belong to MEROPS peptidase family C3 (picornain, clan PA(C)), subfamilies 3CA and 3CB. The protein fold of this peptidase domain for members of this family resembles that of the serine peptidase, chymotrypsin [], the type example for clan PA. Picornaviral proteins are expressed as a single polyprotein which is cleaved by the viral 3C cysteine protease []. The poliovirus polyprotein is selectively cleaved between the Gln-|-Gly bond. In other picornavirus reactions Glu may be substituted for Gln, and Ser or Thr for Gly. ; GO: 0008233 peptidase activity, 0006508 proteolysis, 0016032 viral reproduction; PDB: 2HRV_B 1Z8R_A.

>PF00548 Peptidase_C3: 3C cysteine protease (picornain 3C); InterPro: IPR000199 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=88.12  E-value=7.4  Score=32.67  Aligned_cols=72  Identities=13%  Similarity=0.137  Sum_probs=40.3

Q ss_pred             CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        137 HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       137 ~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      .+.+.|.+..|..+|.|-..|.-.       ..  .+.++.        ..+++...+..  .+......||++++|.+.
T Consensus        22 ~g~~t~l~~gi~~~~~lvp~H~~~-------~~--~i~i~g--------~~~~~~d~~~l--v~~~~~~~Dl~~v~l~~~   82 (172)
T PF00548_consen   22 KGEFTMLALGIYDRYFLVPTHEEP-------ED--TIYIDG--------VEYKVDDSVVL--VDRDGVDTDLTLVKLPRN   82 (172)
T ss_dssp             TEEEEEEEEEEEBTEEEEEGGGGG-------CS--EEEETT--------EEEEEEEEEEE--EETTSSEEEEEEEEEESS
T ss_pred             CceEEEecceEeeeEEEEECcCCC-------cE--EEEECC--------EEEEeeeeEEE--ecCCCcceeEEEEEccCC
Confidence            346678888999999999999221       12  222221        12333332211  111222459999999888


Q ss_pred             CCCCCCeeeee
Q psy13815        217 IQWSDLIRPAC  227 (388)
Q Consensus       217 v~~~~~v~pic  227 (388)
                      -.|.+..+-++
T Consensus        83 ~kfrDIrk~~~   93 (172)
T PF00548_consen   83 PKFRDIRKFFP   93 (172)
T ss_dssp             S-B--GGGGSB
T ss_pred             cccCchhhhhc
Confidence            77766666555

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This signature defines cysteine peptidases belong to MEROPS peptidase family C3 (picornain, clan PA(C)), subfamilies C3A and C3B. The protein fold of this peptidase domain for members of this family resembles that of the serine peptidase, chymotrypsin [], the type example for clan PA. Picornaviral proteins are expressed as a single polyprotein which is cleaved by the viral C3 cysteine protease. The poliovirus polyprotein is selectively cleaved between the Gln-|-Gly bond. In other picornavirus reactions Glu may be substituted for Gln, and Ser or Thr for Gly. ; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis; PDB: 3SJO_E 2H6M_A 1QA7_C 1HAV_B 2HAL_A 2H9H_A 3QZQ_B 3QZR_A 3R0F_B 3SJ9_A ....

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=87.88  E-value=0.55  Score=42.89  Aligned_cols=31  Identities=29%  Similarity=0.442  Sum_probs=27.6

Q ss_pred             CcCCCCCCCCCceEEeeCCcEEEEeeEEeec
Q psy13815         45 GKDACWADSGGPLMLLGAESTQVIGLVSTGI   75 (388)
Q Consensus        45 ~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~   75 (388)
                      .+..|.||+||||+...+++|.++||.+.+.
T Consensus       225 ~~~~~~~d~Gg~lv~~~~gr~tlIGv~~~~~  255 (282)
T PF03761_consen  225 KQYSCKGDRGGPLVKNINGRWTLIGVGASGN  255 (282)
T ss_pred             ccccCCCCccCeEEEEECCCEEEEEEEccCC
Confidence            4678999999999999999999999998655

>COG0265 DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]

Probab=82.51  E-value=27  Score=32.86  Aligned_cols=82  Identities=26%  Similarity=0.307  Sum_probs=46.6

Q ss_pred             eeEEEEEee-CCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        140 HFCGGTIIH-EQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       140 ~~C~GtLI~-~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ...+|.+++ ..+|+|..|=+..      ...+.+.+..       ...+...-+-..+       ..|+|+||.+..-.
T Consensus        72 ~~gSg~i~~~~g~ivTn~hVi~~------a~~i~v~l~d-------g~~~~a~~vg~d~-------~~dlavlki~~~~~  131 (347)
T COG0265          72 GLGSGFIISSDGYIVTNNHVIAG------AEEITVTLAD-------GREVPAKLVGKDP-------ISDLAVLKIDGAGG  131 (347)
T ss_pred             ccccEEEEcCCeEEEecceecCC------cceEEEEeCC-------CCEEEEEEEecCC-------ccCEEEEEeccCCC
Confidence            567888888 6799999998855      5556665511       1233333333222       46999999986532


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEc
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGW  245 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~Gw  245 (388)
                          ...+.+........++....+|-
T Consensus       132 ----~~~~~~~~s~~l~vg~~v~aiGn  154 (347)
T COG0265         132 ----LPVIALGDSDKLRVGDVVVAIGN  154 (347)
T ss_pred             ----CceeeccCCCCcccCCEEEEecC
Confidence                22233333333234555555553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	388
1qrz_A	246	Catalytic Domain Of Plasminogen Length = 246		2e-37
3uir_A	247	Crystal Structure Of The Plasmin-Textilinin-1 Compl		3e-37
1bui_B	250	Structure Of The Ternary Microplasmin-Staphylokinas		3e-37
4dur_A	791	The X-Ray Crystal Structure Of Full-Length Type Ii		5e-37
1bml_A	250	Complex Of The Catalytic Domain Of Human Plasmin An		5e-37
1ddj_A	247	Crystal Structure Of Human Plasminogen Catalytic Do		5e-37
1l4d_A	249	Crystal Structure Of Microplasminogen-streptokinase		5e-37
1l4z_A	248	X-Ray Crystal Structure Of The Complex Of Microplas		6e-37
1rjx_B	247	Human Plasminogen Catalytic Domain, K698m Mutant Le		2e-36
2f91_A	237	1.2a Resolution Structure Of A Crayfish Trypsin Com		1e-33
2any_A	241	Expression, Crystallization And The Three-Dimension		8e-33
1xx9_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		1e-32
1zhm_A	238	Crystal Structure Of The Catalytic Domain Of The Co		1e-32
1xxd_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		1e-32
1zhp_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		2e-32
2anw_A	241	Expression, Crystallization And Three-Dimensional S		3e-32
2f83_A	625	Crystal Structure At 2.9 Angstroms Resolution Of Hu		3e-32
1ekb_B	235	The Serine Protease Domain Of Enteropeptidase Bound		1e-31
3bg8_A	238	Crystal Structure Of Factor Xia In Complex With Cla		2e-31
1zpz_A	238	Factor Xi Catalytic Domain Complexed With N-((R)-1-		2e-31
1zlr_A	237	Factor Xi Catalytic Domain Complexed With 2-Guanidi		2e-31
3sor_A	238	Factor Xia In Complex With A Clorophenyl-tetrazole		2e-31
1zjd_A	237	Crystal Structure Of The Catalytic Domain Of Coagul		2e-31
1zhr_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		2e-31
1a0l_A	244	Human Beta-Tryptase: A Ring-Like Tetramer With Acti		2e-30
2bm2_A	245	Human Beta-Ii Tryptase In Complex With 4-(3-Aminome		2e-30
2zeb_A	243	Potent, Nonpeptide Inhibitors Of Human Mast Cell Tr		2e-30
1eaw_A	241	Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (A		1e-29
1ym0_A	238	Crystal Structure Of Earthworm Fibrinolytic Enzyme		1e-29
3p8g_A	241	Crystal Structure Of Mt-Sp1 In Complex With Benzami		1e-29
4dgj_A	235	Structure Of A Human Enteropeptidase Light Chain Va		2e-29
3dfj_A	263	Crystal Structure Of Human Prostasin Length = 263		2e-29
2f9n_A	245	Crystal Structure Of The Recombinant Human Alpha I		4e-29
3gyl_B	261	Structure Of Prostasin At 1.3 Angstroms Resolution		7e-29
3e0p_B	271	The X-Ray Structure Of Human Prostasin In Complex W		7e-29
2f9o_A	245	Crystal Structure Of The Recombinant Human Alpha I		1e-28
3bn9_B	241	Crystal Structure Of Mt-Sp1 In Complex With Fab Inh		1e-28
1co7_E	245	R117h Mutant Rat Anionic Trypsin Complexed With Bov		2e-28
1lto_A	245	Human Alpha1-Tryptase Length = 245		2e-28
3tgj_E	233	S195a Trypsinogen Complexed With Bovine Pancreatic		2e-28
1ql9_A	223	Factor Xa Specific Inhibitor In Complex With Rat Tr		2e-28
1gdu_A	224	Fusarium Oxysporum Trypsin At Atomic Resolution Len		3e-28
1and_A	223	Anionic Trypsin Mutant With Arg 96 Replaced By His		5e-28
1f7z_A	233	Rat Trypsinogen K15a Complexed With Bovine Pancreat		5e-28
2wpi_S	235	Factor Ixa Superactive Double Mutant Length = 235		5e-28
3tgi_E	223	Wild-Type Rat Anionic Trypsin Complexed With Bovine		5e-28
1rfn_A	235	Human Coagulation Factor Ixa In Complex With P-Amin		8e-28
1ppz_A	224	Trypsin Complexes At Atomic And Ultra-High Resoluti		8e-28
1j15_A	223	Benzamidine In Complex With Rat Trypsin Mutant X991		9e-28
1xvm_A	224	Trypsin From Fusarium Oxysporum- Room Temperature T		1e-27
1slx_B	223	Rat Anionic N143h, E151h Trypsin Complexed To A86h		1e-27
1k9o_E	223	Crystal Structure Of Michaelis Serpin-Trypsin Compl		1e-27
2wpm_S	235	Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Le		1e-27
2wph_S	235	Factor Ixa Superactive Triple Mutant Length = 235		1e-27
1slw_B	223	Rat Anionic N143h, E151h Trypsin Complexed To A86h		1e-27
1anc_A	223	Anionic Trypsin Mutant With Ser 214 Replaced By Lys		1e-27
1fiw_A	290	Three-Dimensional Structure Of Beta-Acrosin From Ra		1e-27
3kcg_H	235	Crystal Structure Of The Antithrombin-Factor Ixa- P		1e-27
1anb_A	223	Anionic Trypsin Mutant With Ser 214 Replaced By Glu		1e-27
1utj_A	242	Trypsin Specificity As Elucidated By Lie Calculatio		2e-27
1pfx_C	235	Porcine Factor Ixa Length = 235		2e-27
1dpo_A	223	Structure Of Rat Trypsin Length = 223		2e-27
1mct_A	223	The Refined 1.6 Angstroms Resolution Crystal Struct		2e-27
1trm_A	223	The Three-Dimensional Structure Of Asn102 Mutant Of		2e-27
2xrc_A	565	Human Complement Factor I Length = 565		2e-27
1ezs_C	223	Crystal Structure Of Ecotin Mutant M84r, W67a, G68a		2e-27
1zzz_A	237	Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes		3e-27
1g3b_A	228	Bovine Beta-Trypsin Bound To Meta-Amidino Schiff Ba		3e-27
1tgs_Z	229	Three-Dimensional Structure Of The Complex Between		3e-27
1amh_A	223	Uncomplexed Rat Trypsin Mutant With Asp 189 Replace		3e-27
1f0t_A	243	Bovine Trypsin Complexed With Rpr131247 Length = 24		4e-27
4an7_A	231	Kunitz Type Trypsin Inhibitor Complex With Porcine		4e-27
1fy8_E	231	Crystal Structure Of The Deltaile16val17 Rat Anioni		4e-27
1bzx_E	222	The Crystal Structure Of Anionic Salmon Trypsin In		5e-27
2cga_A	245	Bovine Chymotrypsinogen A. X-Ray Crystal Structure		6e-27
3veq_B	223	A Binary Complex Betwwen Bovine Pancreatic Trypsin		7e-27
1y59_T	223	Dianhydrosugar-Based Benzamidine, Factor Xa Specifi		7e-27
1dlk_B	230	Crystal Structure Analysis Of Delta-Chymotrypsin Bo		8e-27
1oph_B	243	Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh		8e-27
1fiz_A	263	Three Dimensional Structure Of Beta-Acrosin From Bo		9e-27
1f5r_A	231	Rat Trypsinogen Mutant Complexed With Bovine Pancre		1e-26
1tab_E	223	Structure Of The Trypsin-Binding Domain Of Bowman-B		1e-26
1mbq_A	220	Anionic Trypsin From Pacific Chum Salmon Length = 2		1e-26
1tfx_A	223	Complex Of The Second Kunitz Domain Of Tissue Facto		2e-26
3myw_A	223	The Bowman-Birk Type Inhibitor From Mung Bean In Te		2e-26
3tgk_E	231	Trypsinogen Mutant D194n And Deletion Of Ile 16-Val		2e-26
2fi4_E	223	Crystal Structure Of A Bpti Variant (Cys14->ser) In		2e-26
1taw_A	223	Bovine Trypsin Complexed To Appi Length = 223		2e-26
3t2n_A	372	Human Hepsin Protease In Complex With The Fab Fragm		2e-26
1z8g_A	372	Crystal Structure Of The Extracellular Region Of Th		2e-26
1a0j_A	223	Crystal Structure Of A Non-Psychrophilic Trypsin Fr		2e-26
2zpr_A	222	Crystal Structure Of Anionic Trypsin Isoform 2 From		2e-26
1brb_E	223	Crystal Structures Of Rat Anionic Trypsin Complexed		2e-26
1an1_E	223	Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Len		3e-26
1o5e_H	255	Dissecting And Designing Inhibitor Selectivity Dete		3e-26
1hj8_A	222	1.00 Aa Trypsin From Atlantic Salmon Length = 222		4e-26
5ptp_A	223	Structure Of Hydrolase (Serine Proteinase) Length =		4e-26
3otj_E	223	A Crystal Structure Of Trypsin Complexed With Bpti		4e-26
2d8w_A	223	Structure Of Hyper-Vil-Trypsin Length = 223		4e-26
2oq5_A	232	Crystal Structure Of Desc1, A New Member Of The Typ		5e-26
2a31_A	223	Trypsin In Complex With Borate Length = 223		6e-26
2zpq_A	222	Crystal Structure Of Anionic Trypsin Isoform 1 From		6e-26
2ftm_A	224	Crystal Structure Of A Bpti Variant (Cys38->ser) In		6e-26
4igd_A	406	Crystal Structure Of The Zymogen Catalytic Region O		6e-26
2zps_A	222	Crystal Structure Of Anionic Trypsin Isoform 3 From		8e-26
1bit_A	237	The Crystal Structure Of Anionic Salmon Trypsin In		1e-25
1ntp_A	223	Use Of The Neutron Diffraction HD EXCHANGE TECHNIQU		1e-25
3qk1_A	229	Crystal Structure Of Enterokinase-Like Trypsin Vari		1e-25
1trn_A	224	Crystal Structure Of Human Trypsin 1: Unexpected Ph		2e-25
1fdp_A	235	Proenzyme Of Human Complement Factor D, Recombinant		2e-25
2ra3_A	224	Human Cationic Trypsin Complexed With Bovine Pancre		5e-25
1ybw_A	283	Protease Domain Of Hgfa With No Inhibitor Length =		7e-25
3gov_B	251	Crystal Structure Of The Catalytic Region Of Human		1e-24
2tbs_A	222	Cold-Adaption Of Enzymes: Structural Comparison Bet		1e-24
2xwa_A	228	Crystal Structure Of Complement Factor D Mutant R20		2e-24
3unq_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		2e-24
2wub_A	257	Crystal Structure Of Hgfa In Complex With The Allos		2e-24
2r0l_A	248	Short Form Hgfa With Inhibitory Fab75 Length = 248		2e-24
1dst_A	228	Mutant Of Factor D With Enhanced Catalytic Activity		3e-24
1dsu_A	228	Human Factor D, Complement Activating Enzyme Length		3e-24
1h4w_A	224	Structure Of Human Trypsin Iv (Brain Trypsin) Lengt		3e-24
1aut_C	250	Human Activated Protein C Length = 250		5e-24
3f6u_H	240	Crystal Structure Of Human Activated Protein C (Apc		5e-24
2xw9_A	228	Crystal Structure Of Complement Factor D Mutant S18		5e-24
3pmj_A	223	Bovine Trypsin Variant X(Tripleile227) In Complex W		6e-24
3uns_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		6e-24
1v2n_T	223	Potent Factor Xa Inhibitor In Complex With Bovine T		6e-24
3pwb_A	223	Bovine Trypsin Variant X(Tripleglu217ile227) In Com		7e-24
1v2k_T	223	Factor Xa Specific Inhibitor In Complex With Bovine		8e-24
2eek_A	220	Crystal Structure Of Atlantic Cod Trypsin Complexed		9e-24
2r9p_A	224	Human Mesotrypsin Complexed With Bovine Pancreatic		1e-23
4b2c_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		1e-23
3plk_A	223	Bovine Trypsin Variant X(Tripleile227) In Complex W		1e-23
2olg_A	278	Crystal Structure Of The Serine Protease Domain Of		1e-23
4b1t_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		1e-23
3uqv_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		1e-23
4b2b_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		1e-23
1q3x_A	328	Crystal Structure Of The Catalytic Region Of Human		1e-23
4dg4_A	224	Human Mesotrypsin-S39y Complexed With Bovine Pancre		2e-23
4d9q_A	228	Inhibiting Alternative Pathway Complement Activatio		2e-23
4b2a_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		2e-23
1mh0_A	287	Crystal Structure Of The Anticoagulant Slow Form Of		2e-23
3uwi_A	223	Bovine Trypsin Variant X(Tripleglu217phe227) In Com		2e-23
1jwt_A	305	Crystal Structure Of Thrombin In Complex With A Nov		2e-23
1mkw_K	308	The Co-Crystal Structure Of Unliganded Bovine Alpha		2e-23
1eoj_A	289	Design Of P1' And P3' Residues Of Trivalent Thrombi		2e-23
1hag_E	295	The Isomorphous Structures Of Prethrombin2, Hirugen		2e-23
1nm6_A	287	Thrombin In Complex With Selective Macrocyclic Inhi		2e-23
2bdy_A	289	Thrombin In Complex With Inhibitor Length = 289		2e-23
1nu9_A	291	Staphylocoagulase-prethrombin-2 Complex Length = 29		2e-23
1d6w_A	287	Structure Of Thrombin Complexed With Selective Non-		2e-23
1d9i_A	288	Structure Of Thrombin Complexed With Selective Non-		2e-23
3ela_H	254	Crystal Structure Of Active Site Inhibited Coagulat		3e-23
1thp_B	259	Structure Of Human Alpha-Thrombin Y225p Mutant Boun		3e-23
1zjk_A	403	Crystal Structure Of The Zymogen Catalytic Region O		3e-23
3v0x_A	223	Bovine Trypsin Variant X(Tripleglu217phe227) In Com		3e-23
3nxp_A	424	Crystal Structure Of Human Prethrombin-1 Length = 4		4e-23
1v2s_T	223	Benzamidine In Complex With Bovine Trypsin Variant		4e-23
3k65_B	308	Crystal Structure Of Prethombin-2FRAGMENT-2 Complex		4e-23
3sqe_E	290	Crystal Structure Of Prethrombin-2 Mutant S195a In		4e-23
1v2o_T	223	Trypsin Inhibitor In Complex With Bovine Trypsin Va		5e-23
2tld_E	220	Crystal Structure Of An Engineered Subtilisin Inhib		5e-23
1v2u_T	223	Benzamidine In Complex With Bovine Trypsin Varinat		5e-23
1v2j_T	223	Benzamidine In Complex With Bovine Trypsin Variant		6e-23
1twx_B	259	Crystal Structure Of The Thrombin Mutant D221aD222K		7e-23
1v2q_T	223	Trypsin Inhibitor In Complex With Bovine Trypsin Va		7e-23
1tq0_B	257	Crystal Structure Of The Potent Anticoagulant Throm		9e-23
3ee0_B	259	Crystal Structure Of The W215aE217A MUTANT OF HUMAN		1e-22
2bq6_B	249	Crystal Structure Of Factor Xa In Complex With 21 L		1e-22
1z8i_B	259	Crystal Structure Of The Thrombin Mutant G193a Boun		1e-22
1bth_H	259	Structure Of Thrombin Complexed With Bovine Pancrea		1e-22
1gvl_A	223	Human Prokallikrein 6 (Hk6) PROZYME PROPROTEASE M P		1e-22
1hj9_A	223	Atomic Resolution Structures Of Trypsin Provide Ins		1e-22
1id5_H	256	Crystal Structure Of Bovine Thrombin Complex With P		1e-22
1bbr_K	259	The Structure Of Residues 7-16 Of The A Alpha Chain		1e-22
1dan_H	254	Complex Of Active Site Inhibited Human Blood Coagul		2e-22
1xka_C	235	Factor Xa Complexed With A Synthetic Inhibitor Fx-2		2e-22
3ens_B	238	Crystal Structure Of Human Fxa In Complex With Meth		2e-22
1ezq_A	254	Crystal Structure Of Human Coagulation Factor Xa Co		2e-22
1c5m_D	255	Structural Basis For Selectivity Of A Small Molecul		2e-22
1hcg_A	241	Structure Of Human Des(1-45) Factor Xa At 2.2 Angst		2e-22
1fxy_A	228	Coagulation Factor Xa-Trypsin Chimera Inhibited Wit		2e-22
1fjs_A	234	Crystal Structure Of The Inhibitor Zk-807834 (Ci-10		2e-22
3gic_B	250	Structure Of Thrombin Mutant Delta(146-149e) In The		2e-22
2bvr_H	252	Human Thrombin Complexed With Fragment-based Small		2e-22
1sfq_B	259	Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack		2e-22
1mq5_A	233	Crystal Structure Of 3-chloro-n-[4-chloro-2-[[(4-ch		2e-22
2a0q_B	257	Structure Of Thrombin In 400 Mm Potassium Chloride		3e-22
1rd3_B	259	2.5a Structure Of Anticoagulant Thrombin Variant E2		3e-22
1l2e_A	223	Human Kallikrein 6 (Hk6) Active Form With Benzamidi		3e-22
1qur_H	257	Human Alpha-Thrombin In Complex With Bivalent, Benz		3e-22
1h8i_H	253	X-Ray Crystal Structure Of Human Alpha-Thrombin Wit		3e-22
1fax_A	254	Coagulation Factor Xa Inhibitor Complex Length = 25		3e-22
1gj5_H	258	Selectivity At S1, H2o Displacement, Upa, Tpa, Ser1		3e-22
1abi_H	259	Structure Of The Hirulog 3-Thrombin Complex And Nat		3e-22
1h8d_H	260	X-Ray Structure Of The Human Alpha-Thrombin Complex		3e-22
3jz1_B	259	Crystal Structure Of Human Thrombin Mutant N143p In		3e-22
2thf_B	259	Structure Of Human Alpha-thrombin Y225f Mutant Boun		3e-22
1dm4_B	260	Ser195ala Mutant Of Human Thrombin Complexed With F		4e-22
1a5i_A	265	Catalytic Domain Of Vampire Bat (Desmodus Rotundus)		4e-22
1fi8_A	228	Rat Granzyme B [n66q] Complexed To Ecotin [81-84 Ie		4e-22
1z8j_B	259	Crystal Structure Of The Thrombin Mutant G193p Boun		4e-22
1b7x_B	259	Structure Of Human Alpha-Thrombin Y225i Mutant Boun		4e-22
4d8n_A	223	Human Kallikrein 6 Inhibitors With A Para-Amidobenz		4e-22
2gd4_H	241	Crystal Structure Of The Antithrombin-S195a Factor		4e-22
1bru_P	241	Structure Of Porcine Pancreatic Elastase Complexed		4e-22
1sgf_G	237	Crystal Structure Of 7s Ngf: A Complex Of Nerve Gro		4e-22
3tvj_B	242	Catalytic Fragment Of Masp-2 In Complex With Its Sp		5e-22
1jou_B	259	Crystal Structure Of Native S195a Thrombin With An		6e-22
3r3g_B	259	Structure Of Human Thrombin With Residues 145-150 O		6e-22
2y5f_A	234	Factor Xa - Cation Inhibitor Complex Length = 234		8e-22
1dx5_M	259	Crystal Structure Of The Thrombin-Thrombomodulin Co		9e-22
1md8_A	329	Monomeric Structure Of The Active Catalytic Domain		9e-22
4fxg_H	242	Complement C4 In Complex With Masp-2 Length = 242		9e-22
2bok_A	241	Factor Xa- Cation Length = 241		1e-21
3edx_B	258	Crystal Structure Of The W215aE217A MUTANT OF MURIN		1e-21
1vzq_H	250	Complex Of Thrombin With Designed Inhibitor 7165 Le		1e-21
2gp9_B	259	Crystal Structure Of The Slow Form Of Thrombin In A		1e-21
2od3_B	259	Human Thrombin Chimera With Human Residues 184a, 18		1e-21
1h9h_E	231	Complex Of Eeti-Ii With Porcine Trypsin Length = 23		1e-21
1euf_A	227	Bovine Duodenase(New Serine Protease), Crystal Stru		1e-21
2ocv_B	259	Structural Basis Of Na+ Activation Mimicry In Murin		2e-21
1md7_A	328	Monomeric Structure Of The Zymogen Of Complement Pr		2e-21
2asu_B	234	Crystal Structure Of The Beta-Chain Of HgflMSP Leng		2e-21
2qy0_B	242	Active Dimeric Structure Of The Catalytic Domain Of		2e-21
1gpz_A	399	The Crystal Structure Of The Zymogen Catalytic Doma		2e-21
1wbg_B	259	Active Site Thrombin Inhibitors Length = 259		2e-21
3i77_A	230	3599170-Loops Of Fxa In Sgt Length = 230		3e-21
1kig_H	241	Bovine Factor Xa Length = 241		4e-21
1mza_A	240	Crystal Structure Of Human Pro-Granzyme K Length =		6e-21
2pux_B	258	Crystal Structure Of Murine Thrombin In Complex Wit		6e-21
1ao5_A	237	Mouse Glandular Kallikrein-13 (Prorenin Converting		7e-21
1vr1_H	261	Specifity For Plasminogen Activator Inhibitor-1 Len		1e-20
2b9l_A	394	Crystal Structure Of Prophenoloxidase Activating Fa		1e-20
1m9u_A	241	Crystal Structure Of Earthworm Fibrinolytic Enzyme		1e-20
2pgb_B	259	Inhibitor-Free Human Thrombin Mutant C191a-C220a Le		2e-20
4gaw_A	226	Crystal Structure Of Active Human Granzyme H Length		3e-20
1pyt_C	253	Ternary Complex Of Procarboxypeptidase A, Proprotei		3e-20
2zgc_A	240	Crystal Structure Of Active Human Granzyme M Length		5e-20
2qxg_A	224	Crystal Structure Of Human Kallikrein 7 In Complex		5e-20
1eq9_A	222	Crystal Structure Of Fire Ant Chymotrypsin Complexe		7e-20
3tju_A	226	Crystal Structure Of Human Granzyme H With An Inhib		8e-20
1fq3_A	227	Crystal Structure Of Human Granzyme B Length = 227		1e-19
1iau_A	227	Human Granzyme B In Complex With Ac-Iepd-Cho Length		1e-19
1os8_A	223	Recombinant Streptomyces Griseus Trypsin Length = 2		1e-19
2zgj_A	240	Crystal Structure Of D86n-gzmm Complexed With Its O		2e-19
3bsq_A	227	Crystal Structure Of Human Kallikrein 7 Produced As		2e-19
1oss_A	223	T190p Streptomyces Griseus Trypsin In Complex With		2e-19
4h4f_A	249	Crystal Structure Of Human Chymotrypsin C (ctrc) Bo		3e-19
1hax_B	240	Snapshots Of Serine Protease Catalysis: (A) Acyl-En		3e-19
2est_E	240	Crystallographic Study Of The Binding Of A Trifluor		3e-19
2xxl_A	408	Crystal Structure Of Drosophila Grass Clip Serine P		3e-19
1bda_A	265	Catalytic Domain Of Human Single Chain Tissue Plasm		4e-19
1eai_A	240	Complex Of Ascaris Chymotrpsin/elastase Inhibitor W		4e-19
1sgt_A	223	Refined Crystal Structure Of Streptomyces Griseus T		4e-19
3i78_A	229	3599170186220-Loops Of Fxa In Sgt Length = 229		5e-19
2fmj_A	222	220-Loop Mutant Of Streptomyces Griseus Trypsin Len		1e-18
1si5_H	240	Protease-Like Domain From 2-Chain Hepatocyte Growth		2e-18
1shy_A	234	The Crystal Structure Of Hgf Beta-Chain In Complex		2e-18
2psx_A	227	Crystal Structure Of Human Kallikrein 5 In Complex		3e-18
1fon_A	240	Crystal Structure Of Bovine Procarboxypeptidase A-S		3e-18
1rtf_B	252	Complex Of Benzamidine With The Catalytic Domain Of		4e-18
1pyt_D	251	Ternary Complex Of Procarboxypeptidase A, Proprotei		4e-18
1ton_A	235	Rat Submaxillary Gland Serine Protease, Tonin. Stru		4e-18
1mtn_B	131	Bovine Alpha-Chymotrypsin:bpti Crystallization Leng		6e-18
3beu_A	224	Na+-Dependent Allostery Mediates Coagulation Factor		6e-18
3fzz_A	227	Structure Of Grc Length = 227		6e-18
2zch_P	237	Crystal Structure Of Human Prostate Specific Antige		6e-18
3g01_A	227	Structure Of Grc Mutant E192rE193G Length = 227		8e-18
2aip_A	231	Crystal Structure Of Native Protein C Activator Fro		5e-17
1sgf_A	240	Crystal Structure Of 7s Ngf: A Complex Of Nerve Gro		6e-17
2vnt_A	276	Urokinase-Type Plasminogen Activator Inhibitor Comp		1e-16
2bdg_A	223	Human Kallikrein 4 Complex With Nickel And P-aminob		1e-16
1orf_A	234	The Oligomeric Structure Of Human Granzyme A Reveal		1e-16
1op8_A	234	Crystal Structure Of Human Granzyme A Length = 234		2e-16
3ig6_B	253	Low Molecular Weigth Human Urokinase Type Plasminog		3e-16
1spj_A	238	Structure Of Mature Human Tissue Kallikrein (Human		4e-16
1owd_A	245	Substituted 2-naphthamidine Inhibitors Of Urokinase		6e-16
1lmw_B	253	Lmw U-Pa Structure Complexed With Egrcmk (Glu-Gly-A		6e-16
1sc8_U	262	Urokinase Plasminogen Activator B-Chain-J435 Comple		7e-16
1nn6_A	228	Human Pro-Chymase Length = 228		1e-15
1azz_A	226	Fiddler Crab Collagenase Complexed To Ecotin Length		1e-15
1pjp_A	226	The 2.2 A Crystal Structure Of Human Chymase In Com		2e-15
1npm_A	225	Neuropsin, A Serine Protease Expressed In The Limbi		2e-15
1o5a_B	253	Dissecting And Designing Inhibitor Selectivity Dete		2e-15
1elt_A	236	Structure Of Native Pancreatic Elastase From North		2e-15
3n7o_A	226	X-Ray Structure Of Human Chymase In Complex With Sm		3e-15
4gso_A	232	Structure Of Jararacussin-I Length = 232		3e-15
3mwi_U	246	The Complex Crystal Structure Of Urokianse And 5-Ni		3e-15
1owe_A	245	Substituted 2-Naphthamidine Inhibitors Of Urokinase		3e-15
1w0z_U	247	Urokinase Type Plasminogen Activator Length = 247		4e-15
1ejn_A	253	Urokinase Plasminogen Activator B-Chain Inhibitor C		4e-15
1gj7_B	253	Engineering Inhibitors Highly Selective For The S1		4e-15
1klt_A	226	Crystal Structure Of Pmsf-Treated Human Chymase At		5e-15
1gi8_B	245	A Novel Serine Protease Inhibition Motif Involving		5e-15
1kdq_A	131	Crystal Structure Analysis Of The Mutant S189d Rat		5e-15
1fv9_A	245	Crystal Structure Of Human Microurokinase In Comple		7e-15
4afq_A	226	Human Chymase - Fynomer Complex Length = 226		7e-15
1au8_A	224	Human Cathepsin G Length = 224		7e-15
1kyn_B	235	Cathepsin-G Length = 235		8e-15
2jet_B	128	Crystal Structure Of A Trypsin-Like Mutant (S189d,		9e-15
1hyl_A	230	The 1.8 A Structure Of Collagenase From Hypoderma L		1e-14
2nwn_A	253	New Pharmacophore For Serine Protease Inhibition Re		2e-14
4fu7_A	246	Crystal Structure Of The Urokinase Length = 246		2e-14
4e7n_A	238	Crystal Structure Of Ahv_tl-I, A Glycosylated Snake		2e-14
1bqy_A	234	Plasminogen Activator (tsv-pa) From Snake Venom Len		2e-14
1elv_A	333	Crystal Structure Of The Catalytic Domain Of Human		3e-14
2o8u_A	253	Crystal Structure And Binding Epitopes Of Urokinase		3e-14
1fuj_A	221	Pr3 (Myeloblastin) Length = 221		7e-14
3rp2_A	224	The Structure Of Rat Mast Cell Protease Ii At 1.9-A		2e-13
1op0_A	234	Crystal Structure Of Aav-sp-i, A Glycosylated Snake		3e-13
1op2_A	234	Crystal Structure Of Aav-Sp-Ii, A Glycosylated Snak		3e-13
1bbr_H	150	The Structure Of Residues 7-16 Of The A Alpha Chain		5e-13
1bhx_B	147	X-Ray Structure Of The Complex Of Human Alpha Throm		1e-12
1aks_A	125	Crystal Structure Of The First Active Autolysate Fo		2e-12
4f4o_C	347	Structure Of The Haptoglobin-Haemoglobin Complex Le		2e-12
1a7s_A	225	Atomic Resolution Structure Of Hbp Length = 225		1e-11
1fy3_A	225	[g175q]hbp, A Mutant Of Human Heparin Binding Prote		1e-11
1hne_E	218	Structure Of Human Neutrophil Elastase In Complex W		1e-11
1ppg_E	218	The Refined 2.3 Angstroms Crystal Structure Of Huma		2e-11
2rg3_A	218	Covalent Complex Structure Of Elastase Length = 218		2e-11
1ppf_E	218	X-Ray Crystal Structure Of The Complex Of Human Leu		2e-11
1b0f_A	218	Crystal Structure Of Human Neutrophil Elastase With		2e-11
3s69_A	234	Crystal Structure Of Saxthrombin Length = 234		2e-11
3s9a_A	234	Russell's Viper Venom Serine Proteinase, Rvv-V (Clo		6e-11
1fy1_A	225	[r23s,F25e]hbp, A Mutant Of Human Heparin Binding P		1e-10
2rdl_A	226	Hamster Chymase 2 Length = 226		2e-10
1gvz_A	237	Prostate Specific Antigen (Psa) From Stallion Semin		3e-10
3h7t_A	235	Crystal Structure Of Scabies Mite Inactivated Prote		2e-09
2kai_B	152	Refined 2.5 Angstroms X-Ray Crystal Structure Of Th		3e-09
1ept_C	98	Refined 1.8 Angstroms Resolution Crystal Structure		1e-08
2odp_A	509	Complement Component C2a, The Catalytic Fragment Of		2e-08
2i6q_A	517	Complement Component C2a Length = 517		3e-08
3h7o_A	228	Crystal Structure Of Scabies Mite Inactivated Prote		5e-08
1uhb_B	98	Crystal Structure Of Porcine Alpha Trypsin Bound Wi		8e-08
2xwb_F	732	Crystal Structure Of Complement C3b In Complex With		2e-06
3hrz_D	741	Cobra Venom Factor (Cvf) In Complex With Human Fact		2e-06
2ok5_A	752	Human Complement Factor B Length = 752		2e-06
1rrk_A	497	Crystal Structure Analysis Of The Bb Segment Of Fac		3e-06
2win_I	507	C3 Convertase (C3bbb) Stabilized By Scin Length = 5		3e-06
1dle_A	298	Factor B Serine Protease Domain Length = 298		3e-06
3f1s_B	283	Crystal Structure Of Protein Z Complexed With Prote		3e-06
3h5c_B	317	X-Ray Structure Of Protein Z-Protein Z Inhibitor Co		4e-06
1ept_A	43	Refined 1.8 Angstroms Resolution Crystal Structure		5e-06
2kai_A	80	Refined 2.5 Angstroms X-Ray Crystal Structure Of Th		5e-04
1bbr_E	109	The Structure Of Residues 7-16 Of The A Alpha Chain		6e-04
2hnt_C	70	Crystallographic Structure Of Human Gamma-Thrombin		7e-04

>pdb|1QRZ|A Chain A, Catalytic Domain Of Plasminogen Length = 246

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 141/273 (51%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 15  GRVVGGCVAHPHSWPWQVSLRTRFGQHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 74
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 75  AHQEVNL-EPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 127
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 128 MVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 180
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q DSGGPL+    +   +
Sbjct: 181 CAGHLAGGTDSC------------------------------QGDSGGPLVCFEKDKYIL 210
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   L
Sbjct: 211 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVL 243

>pdb|3UIR|A Chain A, Crystal Structure Of The Plasmin-Textilinin-1 Complex Length = 247

Iteration: 1
 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 141/273 (51%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 16  GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 75
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 76  AHQEVNL-EPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 128
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 129 VVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 181
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q DSGGPL+    +   +
Sbjct: 182 CAGHLAGGTDSC------------------------------QGDSGGPLVCFEKDKYIL 211
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 212 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244

>pdb|1BUI|B Chain B, Structure Of The Ternary Microplasmin-Staphylokinase-Microplasmin Complex: A Proteinase-Cofactor-Substrate Complex In Action Length = 250

Iteration: 1
 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 141/273 (51%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 19  GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 78
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 79  AHQEVNL-EPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 131
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 132 VVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 184
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q DSGGPL+    +   +
Sbjct: 185 CAGHLAGGTDSC------------------------------QGDSGGPLVCFEKDKYIL 214
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 215 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 247

>pdb|4DUR|A Chain A, The X-Ray Crystal Structure Of Full-Length Type Ii Human Plasminogen Length = 791

Iteration: 1
 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 141/273 (51%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 560 GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 619
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 620 AHQEVNL-EPHVQEIEVSRLFLEPTRK------DIALLKLSSPAVITDKVIPACLPSPNY 672
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 673 VVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 725
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q DSGGPL+    +   +
Sbjct: 726 CAGHLAGGTDSC------------------------------QGDSGGPLVCFEKDKYIL 755
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 756 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 788

>pdb|1BML|A Chain A, Complex Of The Catalytic Domain Of Human Plasmin And Streptokinase Length = 250

Iteration: 1
 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 141/273 (51%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 19  GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 78
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 79  AHQEVNL-EPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 131
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 132 VVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 184
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q D+GGPL+    +   +
Sbjct: 185 CAGHLAGGTDSC------------------------------QGDAGGPLVCFEKDKYIL 214
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 215 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 247

>pdb|1DDJ|A Chain A, Crystal Structure Of Human Plasminogen Catalytic Domain Length = 247

Iteration: 1
 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 141/273 (51%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 16  GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 75
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 76  AHQEVNL-EPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 128
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 129 VVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 181
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q D+GGPL+    +   +
Sbjct: 182 CAGHLAGGTDSC------------------------------QGDAGGPLVCFEKDKYIL 211
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 212 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244

>pdb|1L4D|A Chain A, Crystal Structure Of Microplasminogen-streptokinase Alpha Domain Complex Length = 249

Iteration: 1
 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 141/273 (51%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 18  GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 77
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 78  AHQEVNL-EPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 130
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 131 VVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 183
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q D+GGPL+    +   +
Sbjct: 184 CAGHLAGGTDSC------------------------------QGDAGGPLVCFEKDKYIL 213
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 214 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 246

>pdb|1L4Z|A Chain A, X-Ray Crystal Structure Of The Complex Of Microplasminogen With Alpha Domain Of Streptokinase In The Presence Cadmium Ions Length = 248

Iteration: 1
 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 141/273 (51%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 17  GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 76
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 77  AHQEVNL-EPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 129
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L++  L V+ N+VC  +    G+   V+ +++
Sbjct: 130 VVADRTECFITGWGETQGTFGAG----LLKEAQLPVIENKVCNRYEFLNGR---VQSTEL 182
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q D+GGPL+    +   +
Sbjct: 183 CAGHLAGGTDSC------------------------------QGDAGGPLVCFEKDKYIL 212
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 213 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 245

>pdb|1RJX|B Chain B, Human Plasminogen Catalytic Domain, K698m Mutant Length = 247

Iteration: 1
 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 138/273 (50%), Gaps = 46/273 (16%)
Query: 115 GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           G +VGG  A P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL   P P S   I  
Sbjct: 16  GAVVGGCVAYPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILG 75
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +E +L  P +  + V R+   P+        DIALL+L+     +D + PACLPS + 
Sbjct: 76  AHQEVNL-EPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 128
Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             ++++   + GWG T      G    +L +  L V+ N+VC  +    G+   V+ +++
Sbjct: 129 VVADRTECFITGWGETQGTFGAG----LLMEAQLPVIENKVCNRYEFLNGR---VQSTEL 181
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAGH  GG D+C                              Q DSGGPL+    +   +
Sbjct: 182 CAGHLAGGTDSC------------------------------QGDSGGPLVCFEKDKYIL 211
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 212 QGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244

>pdb|2F91|A Chain A, 1.2a Resolution Structure Of A Crayfish Trypsin Complexed With A Peptide Inhibitor, Sgti Length = 237

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 45/271 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKR----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           IVGG  A  GEFP+ +S +        HFCG +I +E + +TA HC+  G    + S + 
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVY-GDDYENPSGLQ 59
Query: 173 VTLKEHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           +   E D+S    S   + V +I+ H +   +  +NDI+LL+L+ S+ ++D + P  LP 
Sbjct: 60  IVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPE 119
Query: 231 GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                +   V V GWG T+E    G   ++LQKV + +VS++ C+A Y ++     + +S
Sbjct: 120 QG-HTATGDVIVTGWGTTSEG---GNTPDVLQKVTVPLVSDEDCRADYGAD----EILDS 171
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG  +GGKD+C                              Q DSGGPL      ST
Sbjct: 172 MICAGVPEGGKDSC------------------------------QGDSGGPLAASDTGST 201
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
            + G+VS G GCARP  PG+YT ++ ++ WI
Sbjct: 202 YLAGIVSWGYGCARPGYPGVYTEVSYHVDWI 232

>pdb|2ANY|A Chain A, Expression, Crystallization And The Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score =  137 bits (346), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 139/269 (51%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  ++ GE+PW VSL+       H CGG++I  QW++TAAHC    P        + 
Sbjct: 1   IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L+  D+++ +  +  +  I+ H ++  S  N+DIAL++L   +++++  +P  LPS G 
Sbjct: 61  ILELSDITKDTPFS-QIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
                 +  V GWG++ E   +G   NILQKV + +V+N+ CQ  YQ       + +  +
Sbjct: 120 TSTIYTNCWVTGWGFSKE---KGEIQNILQKVNIPLVTNEECQKRYQD----YKITQRMV 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+++GGKDAC                              + DSGGPL+       ++
Sbjct: 173 CAGYKEGGKDAC------------------------------KGDSGGPLVCKHNGMWRL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCAR   PG+YT++  Y+ WI
Sbjct: 203 VGITSWGEGCARREQPGVYTKVAEYMDWI 231

>pdb|1XX9|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Ecotinm84r Length = 238

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + ++ +   S   V  I+ H  +  +    DIALL+L  ++ ++D  RP CLPS G 
Sbjct: 61  ILNQSEI-KEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|1ZHM|A Chain A, Crystal Structure Of The Catalytic Domain Of The Coagulation Factor Xia In Complex With Benzamidine (s434a- T475a-k437 Mutant) Length = 238

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 131/269 (48%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + +++  + S   V  I+ H  +  +    DIALL+L  ++ ++D  RP CLPS G 
Sbjct: 61  ILNQAEIAEDT-SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYADSQRPICLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|1XXD|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Mutated Ecotin Length = 238

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + ++ +   S   V  I+ H  +  +    DIALL+L  ++ ++D  RP CLPS G 
Sbjct: 61  ILNQAEI-KEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYADSQRPICLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|1ZHP|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-K505 Mutant) Length = 238

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + ++ +   S   V  I+ H  +  +    DIALL+L  ++ ++D  RP CLPS G 
Sbjct: 61  ILNQAEI-KEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYADSQRPICLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RALRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|2ANW|A Chain A, Expression, Crystallization And Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 137/269 (50%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  ++ GE+PW VSL+       H CGG++I  QW++TAAHC    P        + 
Sbjct: 1   IVGGTNSSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L   D+++ +  +  +  I+ H ++  S  N+DIAL++L   + +++  +P  LPS G 
Sbjct: 61  ILNLSDITKDTPFS-QIKEIIIHQNYKVSEGNHDIALIKLQAPLNYTEFQKPISLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
                 +  V GWG++ E   +G   NILQKV + +V+N+ CQ  YQ       + +  +
Sbjct: 120 TSTIYTNCWVTGWGFSKE---KGEIQNILQKVNIPLVTNEECQKRYQD----YKITQRMV 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+++GGKDAC                              + DSGGPL+       ++
Sbjct: 173 CAGYKEGGKDAC------------------------------KGDSGGPLVCKHNGMWRL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCAR   PG+YT++  Y+ WI
Sbjct: 203 VGITSWGEGCARREQPGVYTKVAEYMDWI 231

>pdb|2F83|A Chain A, Crystal Structure At 2.9 Angstroms Resolution Of Human Plasma Coagulation Factor Xi Zymogen Length = 625

Iteration: 1
 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 131/270 (48%), Gaps = 42/270 (15%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      +
Sbjct: 387 RIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 446
Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-G 231
             L + ++ +   S   V  I+ H  +  +    DIALL+L  ++ ++D  RP CLPS G
Sbjct: 447 GILNQSEI-KEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKG 505
Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
             +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   
Sbjct: 506 DRNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--M 558
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG+ +GGKDAC                              + DSGGPL     E   
Sbjct: 559 ICAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWH 588
Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           ++G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 589 LVGITSWGEGCAQRERPGVYTNVVEYVDWI 618

>pdb|1EKB|B Chain B, The Serine Protease Domain Of Enteropeptidase Bound To Inhibitor Val- Asp-asp-asp-asp-lys-chloromethane Length = 235

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 43/273 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  +  G +PW+V+L       CG +++   W+V+AAHC+      +  S+    L 
Sbjct: 1   IVGGSDSREGAWPWVVALYFDDQQVCGASLVSRDWLVSAAHCVYG--RNMEPSKWKAVLG 58
Query: 177 EH---DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H   +L+ P I T  + +I+ +P ++    NNDIA++ L   + ++D I+P CLP  + 
Sbjct: 59  LHMASNLTSPQIETRLIDQIVINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLPEENQ 118
Query: 234 DYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +    + ++AGWG       QG  +++LQ+  + ++SN+ C    Q +  + N+ E+ +
Sbjct: 119 VFPPGRICSIAGWGAL---IYQGSTADVLQEADVPLLSNEKC----QQQMPEYNITENMV 171
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+E GG D+C                              Q DSGGPLM        +
Sbjct: 172 CAGYEAGGVDSC------------------------------QGDSGGPLMCQENNRWLL 201
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G  CA P  PG+Y R+ R+  WI   L
Sbjct: 202 AGVTSFGYQCALPNRPGVYARVPRFTEWIQSFL 234

>pdb|3BG8|A Chain A, Crystal Structure Of Factor Xia In Complex With Clavatadine A Length = 238

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 129/269 (47%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + ++ +   S   V  I+ H  +  +    DIALL+L  ++ ++D  RP  LPS G 
Sbjct: 61  ILNQSEI-KEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGE 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|1ZPZ|A Chain A, Factor Xi Catalytic Domain Complexed With N-((R)-1-(4- Bromophenyl)ethyl)urea-Asn-Val-Arg-Alpha-Ketothiazole Length = 238

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + +++  + S   V  I+ H  +  +    DIALL+L  ++ ++D  RP  LPS G 
Sbjct: 61  ILNQSEIAEDT-SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|1ZLR|A Chain A, Factor Xi Catalytic Domain Complexed With 2-Guanidino-1-(4-(4,4,5,5- Tetramethyl-1,3,2-Dioxaborolan-2-Yl)phenyl)ethyl Nicotinate Length = 237

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + +++  + S   V  I+ H  +  +    DIALL+L  ++ ++D  RP  LPS G 
Sbjct: 61  ILNQAEIAEDT-SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYADSQRPISLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|3SOR|A Chain A, Factor Xia In Complex With A Clorophenyl-tetrazole Inhibitor Length = 238

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 129/269 (47%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + ++ +   S   V  I+ H  +  +    DIALL+L  ++ ++D  RP  LPS G 
Sbjct: 61  ILNQSEI-KEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|1ZJD|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Kunitz Protease Inhibitor Domain Of Protease Nexin Ii Length = 237

Iteration: 1
 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 129/269 (47%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + ++ +   S   V  I+ H  +  +    DIALL+L  ++ ++D  RP  LPS G 
Sbjct: 61  ILNQAEI-KEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYADSQRPISLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|1ZHR|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-C482s-K437a Mutant) Length = 238

Iteration: 1
 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
            L + +++  + S   V  I+ H  +  +    DIALL+L  ++ ++D  RP  LPS G 
Sbjct: 61  ILNQAEIAEDT-SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYADSQRPISLPSKGD 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +       V GWG+      + +  N LQK  + +V+N+ CQ  Y+  G KI  K   +
Sbjct: 120 RNVIYTDCWVTGWGY---RKLRDKIQNTLQKAKIPLVTNEECQKRYR--GHKITHK--MI 172
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +G+ S G GCA+   PG+YT +  Y+ WI
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWI 231

>pdb|1A0L|A Chain A, Human Beta-Tryptase: A Ring-Like Tetramer With Active Sites Facing A Central Pore Length = 244

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 44/273 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A   ++PW VSL+ HG    HFCGG++IH QW++TAAHC+  GP     + + V
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCV--GPDVKDLAALRV 58
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            L+E  L       +PV RI+ HP    +    DIALLEL   ++ S  +    LP  S 
Sbjct: 59  QLREQHLYYQD-QLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASE 117
Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ---SEGKKIN-VK 288
            +       V GWG   +N  +      L++V + ++ N +C A Y      G  +  V+
Sbjct: 118 TFPPGMPCWVTGWG-DVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVR 176
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           +  +CAG+ +  +D+C                              Q DSGGPL+     
Sbjct: 177 DDMLCAGNTR--RDSC------------------------------QGDSGGPLVCKVNG 204
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +    G+VS G GCA+P  PG+YTR+T Y+ WI
Sbjct: 205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWI 237

>pdb|2BM2|A Chain A, Human Beta-Ii Tryptase In Complex With 4-(3-Aminomethyl- Phenyl)-Piperidin-1-Yl-(5-Phenethyl- Pyridin-3-Yl)- Methanone Length = 245

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 44/273 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A   ++PW VSL+ HG    HFCGG++IH QW++TAAHC+  GP     + + V
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCV--GPDVKDLAALRV 58
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            L+E  L       +PV RI+ HP    +    DIALLEL   ++ S  +    LP  S 
Sbjct: 59  QLREQHLYYQD-QLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASE 117
Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ---SEGKKIN-VK 288
            +       V GWG   +N  +      L++V + ++ N +C A Y      G  +  V+
Sbjct: 118 TFPPGMPCWVTGWG-DVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVR 176
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           +  +CAG+ +  +D+C                              Q DSGGPL+     
Sbjct: 177 DDMLCAGNTR--RDSC------------------------------QGDSGGPLVCKVNG 204
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +    G+VS G GCA+P  PG+YTR+T Y+ WI
Sbjct: 205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWI 237

>pdb|2ZEB|A Chain A, Potent, Nonpeptide Inhibitors Of Human Mast Cell Tryptase Length = 243

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 44/273 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A   ++PW VSL+ HG    HFCGG++IH QW++TAAHC+  GP     + + V
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCV--GPDVKDLAALRV 58
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            L+E  L       +PV RI+ HP    +    DIALLEL   ++ S  +    LP  S 
Sbjct: 59  QLREQHLYYQD-QLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASE 117
Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ---SEGKKIN-VK 288
            +       V GWG   +N  +      L++V + ++ N +C A Y      G  +  V+
Sbjct: 118 TFPPGMPCWVTGWG-DVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVR 176
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           +  +CAG+ +  +D+C                              Q DSGGPL+     
Sbjct: 177 DDMLCAGNTR--RDSC------------------------------QGDSGGPLVCKVNG 204
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +    G+VS G GCA+P  PG+YTR+T Y+ WI
Sbjct: 205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWI 237

>pdb|1EAW|A Chain A, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (Aprotinin) Complex Length = 241

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 46/279 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCN--GPSPLSASQINV 173
           +VGG  A+ GE+PW VSL   G GH CG ++I   W+V+AAHC  +  G      +Q   
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 174 TLKEHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
            L  HD S+   P +    + RI+ HP  +  +F+ DIALLEL +  ++S ++RP CLP 
Sbjct: 61  FLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPD 120
Query: 231 GSLDY-SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            S  + + +++ V GWG T      G  + ILQK  + V++   C+     +     +  
Sbjct: 121 ASHVFPAGKAIWVTGWGHTQYG---GTGALILQKGEIRVINQTTCENLLPQQ-----ITP 172
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
             MC G   GG D+C                              Q DSGGPL  + A+ 
Sbjct: 173 RMMCVGFLSGGVDSC------------------------------QGDSGGPLSSVEADG 202
Query: 350 TQV-IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
                G+VS G GCA+   PG+YTRL  +  WI +   +
Sbjct: 203 RIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENTGV 241

>pdb|1YM0|A Chain A, Crystal Structure Of Earthworm Fibrinolytic Enzyme Component B: A Novel, Glycosylated Two-chained Trypsin Length = 238

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 56/280 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG--HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           IVGG+ A P EFPW VS++R     HFCGG+II+++W+V AAHC+  G +P   + +++ 
Sbjct: 1   IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCM-QGEAP---ALVSLV 56
Query: 175 LKEHDLSRPSI--STVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
           + EHD S  S    T  V  I  + ++  ++  ND+++++   +I +   + P C P  +
Sbjct: 57  VGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPA 116
Query: 233 LDYSEQSVTVAGWGWTNEN----PSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
            DY  +    +GWG  N      P+      +L+ V L++ +N  C A Y S+     + 
Sbjct: 117 NDYVYRKSQCSGWGTINSGGVCCPA------VLRYVTLNITTNAFCDAVYTSD----TIY 166
Query: 289 ESQMCAGHEQG--GKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL- 345
           +  +CA    G   +D+C                              Q DSGGPL +  
Sbjct: 167 DDMICATDNTGMTDRDSC------------------------------QGDSGGPLSVKD 196
Query: 346 GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+    ++G+VS GIGCA    PG+Y+R+  + GWI+DT+
Sbjct: 197 GSGIFSLVGIVSWGIGCAS-GYPGVYSRVGFHAGWITDTI 235

>pdb|3P8G|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Benzamidine Length = 241

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 132/279 (47%), Gaps = 46/279 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCN--GPSPLSASQINV 173
           +VGG  A+ GE+PW VSL   G GH CG ++I   W+V+AAHC  +  G      +Q   
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 174 TLKEHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
            L  HD S+   P +    + RI+ HP  +  +F+ DIALLEL +  ++S ++RP CLP 
Sbjct: 61  FLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPD 120
Query: 231 GSLDY-SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            S  + + +++ V GWG T      G  + ILQK  + V+    C+     +     +  
Sbjct: 121 ASHVFPAGKAIWVTGWGHTQYG---GTGALILQKGEIRVIQQTTCENLLPQQ-----ITP 172
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
             MC G   GG D+C                              Q DSGGPL  + A+ 
Sbjct: 173 RMMCVGFLSGGVDSC------------------------------QGDSGGPLSSVEADG 202
Query: 350 TQV-IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
                G+VS G GCA+   PG+YTRL  +  WI +   +
Sbjct: 203 RIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENTGV 241

>pdb|4DGJ|A Chain A, Structure Of A Human Enteropeptidase Light Chain Variant Length = 235

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 134/275 (48%), Gaps = 47/275 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A  G +PW+V L       CG +++   W+V+AAHC+      L  S+    L 
Sbjct: 1   IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYG--RNLEPSKWTAILG 58
Query: 177 EH---DLSRPSISTVPVL--RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
            H   +L+ P   TVP L   I+ +P ++    +NDIA++ L   + ++D I+P  LP  
Sbjct: 59  LHMKSNLTSP--QTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEE 116
Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
           +  +   ++ ++AGWG       QG  ++ILQ+  + ++SN+ C    Q +  + N+ E+
Sbjct: 117 NQVFPPGRNCSIAGWGTV---VYQGTTADILQEADVPLLSNERC----QQQMPEYNITEN 169
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG+E+GG D+C                              Q DSGGPLM       
Sbjct: 170 MICAGYEEGGIDSC------------------------------QGDSGGPLMCQENNRW 199
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            + G+ S G  CA P  PG+Y R++R+  WI   L
Sbjct: 200 FLAGVTSFGYECALPNRPGVYARVSRFTEWIQSFL 234

>pdb|3DFJ|A Chain A, Crystal Structure Of Human Prostasin Length = 263

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 127/271 (46%), Gaps = 40/271 (14%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I GG +A  G++PW VS+   G H CGG+++ EQW+++AAHC    PS        V L 
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCF---PSEHHKEAYEVKLG 57
Query: 177 EHDL-SRPSISTVPVLR-IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H L S    + V  L+ I+ HPS+       DIALL+L+R I +S  IRP  LP+ +  
Sbjct: 58  AHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAANAS 117
Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN---VKES 290
           +      TV GWG    + S       LQ++ + ++S + C A Y  + K      V+E 
Sbjct: 118 FPNGLHCTVTGWGHVAPSVSL-LTPKPLQQLEVPLISRETCNALYNIDAKPEEPHFVQED 176
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG+ +GGKDAC                              Q DSGGPL        
Sbjct: 177 MVCAGYVEGGKDAC------------------------------QGDSGGPLSCPVEGLW 206
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
            + G+VS G  C     PG+YT  + Y  WI
Sbjct: 207 YLTGIVSWGDACGARNRPGVYTLASSYASWI 237

>pdb|2F9N|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant K192qD216G IN COMPLEX WITH LEUPEPTIN Length = 245

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 129/273 (47%), Gaps = 44/273 (16%)
Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A   ++PW VSL+   R+  HFCGG++IH QW++TAAHC+  GP     + + V
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCV--GPDVKDLATLRV 58
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            L+E  L       +PV RI+ HP         DIALLEL   +  S  +    LP  S 
Sbjct: 59  QLREQHLYYQD-QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASE 117
Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ---SEGKKIN-VK 288
            +       V GWG   +N         L++V + ++ N +C A Y      G  +  ++
Sbjct: 118 TFPPGMPCWVTGWG-DVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIR 176
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           +  +CAG+ Q  +D+C                              Q DSGGPL+     
Sbjct: 177 DDMLCAGNSQ--RDSC------------------------------QGDSGGPLVCKVNG 204
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +    G+VS G GCA+P  PG+YTR+T Y+ WI
Sbjct: 205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWI 237

>pdb|3GYL|B Chain B, Structure Of Prostasin At 1.3 Angstroms Resolution In Complex With A Calcium Ion. Length = 261

Iteration: 1
 Score =  124 bits (312), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I GG +A  G++PW VS+   G H CGG+++ EQW+++AAHC    PS        V L 
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCF---PSEHHKEAYEVKLG 57
Query: 177 EHDL-SRPSISTVPVLR-IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H L S    + V  L+ I+ HPS+       DIALL+L+R I +S  IRP  LP+    
Sbjct: 58  AHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQAS 117
Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN---VKES 290
           +      TV GWG    + S       LQ++ + ++S + C + Y  + K      V+E 
Sbjct: 118 FPNGLHCTVTGWGHVAPSVSL-LTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQED 176
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG+ +GGKDAC                              Q DSGGPL        
Sbjct: 177 MVCAGYVEGGKDAC------------------------------QGDSGGPLSCPVEGLW 206
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
            + G+VS G  C     PG+YT  + Y  WI
Sbjct: 207 YLTGIVSWGDACGARNRPGVYTLASSYASWI 237

>pdb|3E0P|B Chain B, The X-Ray Structure Of Human Prostasin In Complex With A Covalent Benzoxazole Inhibitor Length = 271

Iteration: 1
 Score =  124 bits (312), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I GG +A  G++PW VS+   G H CGG+++ EQW+++AAHC    PS        V L 
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCF---PSEHHKEAYEVKLG 57
Query: 177 EHDL-SRPSISTVPVLR-IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H L S    + V  L+ I+ HPS+       DIALL+L+R I +S  IRP  LP+    
Sbjct: 58  AHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQAS 117
Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN---VKES 290
           +      TV GWG    + S       LQ++ + ++S + C + Y  + K      V+E 
Sbjct: 118 FPNGLHCTVTGWGHVAPSVSL-LTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQED 176
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG+ +GGKDAC                              Q DSGGPL        
Sbjct: 177 MVCAGYVEGGKDAC------------------------------QGDSGGPLSCPVEGLW 206
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
            + G+VS G  C     PG+YT  + Y  WI
Sbjct: 207 YLTGIVSWGDACGARNRPGVYTLASSYASWI 237

>pdb|2F9O|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant D216g Length = 245

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 129/273 (47%), Gaps = 44/273 (16%)
Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A   ++PW VSL+   R+  HFCGG++IH QW++TAAHC+  GP     + + V
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCV--GPDVKDLATLRV 58
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            L+E  L       +PV RI+ HP         DIALLEL   +  S  +    LP  S 
Sbjct: 59  QLREQHLYYQD-QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASE 117
Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ---SEGKKIN-VK 288
            +       V GWG   +N         L++V + ++ N +C A Y      G  +  ++
Sbjct: 118 TFPPGMPCWVTGWG-DVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIR 176
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           +  +CAG+ Q  +D+C                              + DSGGPL+     
Sbjct: 177 DDMLCAGNSQ--RDSC------------------------------KGDSGGPLVCKVNG 204
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +    G+VS G GCA+P  PG+YTR+T Y+ WI
Sbjct: 205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWI 237

>pdb|3BN9|B Chain B, Crystal Structure Of Mt-Sp1 In Complex With Fab Inhibitor E2 Length = 241

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 132/279 (47%), Gaps = 46/279 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCN--GPSPLSASQINV 173
           +VGG  A+ GE+PW VSL   G GH CG ++I   W+V+AAHC  +  G      +Q   
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 174 TLKEHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
            L  HD S+   P +    + RI+ HP  +  +F+ DIALLEL +  ++S ++RP  LP 
Sbjct: 61  FLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPD 120
Query: 231 GSLDY-SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            S  + + +++ V GWG T      G  + ILQK  + V++   C+     +     +  
Sbjct: 121 ASHVFPAGKAIWVTGWGHTQYG---GTGALILQKGEIRVINQTTCENLLPQQ-----ITP 172
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
             MC G   GG D+C                              Q DSGGPL  + A+ 
Sbjct: 173 RMMCVGFLSGGVDSC------------------------------QGDSGGPLSSVEADG 202
Query: 350 TQV-IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
                G+VS G GCA+   PG+YTRL  +  WI +   +
Sbjct: 203 RIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENTGV 241

>pdb|1CO7|E Chain E, R117h Mutant Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 245

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 133/272 (48%), Gaps = 53/272 (19%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           KIVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L
Sbjct: 22  KIVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRL 72
Query: 176 KEHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS   
Sbjct: 73  GEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNAHVATVALPSSCA 132
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
               Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C
Sbjct: 133 PAGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVC 184
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
            G  +GGKD+C                              Q DSGGP++  G    ++ 
Sbjct: 185 VGFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQ 210
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 211 GIVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 242

>pdb|1LTO|A Chain A, Human Alpha1-Tryptase Length = 245

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 128/273 (46%), Gaps = 44/273 (16%)
Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A   ++PW VSL+   R+  HFCGG++IH QW++TAAHCL  GP     + + V
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCL--GPDVKDLATLRV 58
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            L+E  L       +PV RI+ HP         DIALLEL   +  S  +    LP  S 
Sbjct: 59  QLREQHLYYQD-QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASE 117
Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ---SEGKKIN-VK 288
            +       V GWG   +N         L++V + ++ N +C A Y      G  +  ++
Sbjct: 118 TFPPGMPCWVTGWG-DVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIR 176
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           +  +CAG+ Q  +D+C                              + DSGGPL+     
Sbjct: 177 DDMLCAGNSQ--RDSC------------------------------KGDSGGPLVCKVNG 204
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +    G+VS   GCA+P  PG+YTR+T Y+ WI
Sbjct: 205 TWLQAGVVSWDEGCAQPNRPGIYTRVTYYLDWI 237

>pdb|3TGJ|E Chain E, S195a Trypsinogen Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 233

Iteration: 1
 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 53/272 (19%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           KIVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L
Sbjct: 10  KIVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRL 60
Query: 176 KEHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS   
Sbjct: 61  GEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCA 120
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
               Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C
Sbjct: 121 PAGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVC 172
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
            G  +GGKD+C                              Q D+GGP++  G    ++ 
Sbjct: 173 VGFLEGGKDSC------------------------------QGDAGGPVVCNG----ELQ 198
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 199 GIVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 230

>pdb|1QL9|A Chain A, Factor Xa Specific Inhibitor In Complex With Rat Trypsin Mutant X99rt Length = 223

Iteration: 1
 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 133/271 (49%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    ++NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1GDU|A Chain A, Fusarium Oxysporum Trypsin At Atomic Resolution Length = 224

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 134/262 (51%), Gaps = 53/262 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG +A+ G+FP+IVS+ R+GG +CGG++++   ++TAAHC+         +Q    ++
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSG------YAQSGFQIR 54
Query: 177 EHDLSRPS---ISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACL-PSGS 232
              LSR S    S++  +R+  HPS+S +  NND+A+L+L+ SI     I  A L  SGS
Sbjct: 55  AGSLSRTSGGITSSLSSVRV--HPSYSGN--NNDLAILKLSTSIPSGGNIGYARLAASGS 110
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
              +  S TVAGWG T+E  S     N+L KV + +VS   C+A Y +      +     
Sbjct: 111 DPVAGSSATVAGWGATSEGGSS-TPVNLL-KVTVPIVSRATCRAQYGTSA----ITNQMF 164
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG   GGKD+C                              Q DSGGP++     S  +
Sbjct: 165 CAGVSSGGKDSC------------------------------QGDSGGPIV---DSSNTL 191
Query: 353 IGLVSTGIGCARPRLPGLYTRL 374
           IG VS G GCARP   G+Y  +
Sbjct: 192 IGAVSWGNGCARPNYSGVYASV 213

>pdb|1AND|A Chain A, Anionic Trypsin Mutant With Arg 96 Replaced By His Length = 223

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDHKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1F7Z|A Chain A, Rat Trypsinogen K15a Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 233

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 11  IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 61
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 62  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 121
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 122 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 173
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 174 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 199
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 200 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 230

>pdb|2WPI|S Chain S, Factor Ixa Superactive Double Mutant Length = 235

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 49/273 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVTL 175
           +VGG  A PG+FPW V L      FCGG+I++E+WIVTAAHC+  G    + A + N+  
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEE 60
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCS--SFNNDIALLELTRSIQWSDLIRPACLPSG-- 231
            EH   + +     V+RI+ H +++ +  ++N+DIALLEL   +  +  + P C+     
Sbjct: 61  TEHTEQKRN-----VIRIIPHHNYNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEY 115
Query: 232 -SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
            ++     S  V+GWG       +GR + +LQ + + +V    C         K  +  +
Sbjct: 116 TNIFLKFGSGYVSGWGRVFH---KGRSALVLQYLRVPLVDRATCL-----RSTKFTITNN 167
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAG  +GG+D+C                              Q DSGGP +     ++
Sbjct: 168 MFCAGFHEGGRDSC------------------------------QGDSGGPHVTEVEGTS 197
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISD 383
            + G++S G  CA     G+YT+++RY+ WI +
Sbjct: 198 FLTGIISWGEECAMKGKYGIYTKVSRYVNWIKE 230

>pdb|3TGI|E Chain E, Wild-Type Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 223

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1RFN|A Chain A, Human Coagulation Factor Ixa In Complex With P-Amino Benzamidine Length = 235

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 49/273 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVTL 175
           +VGG  A PG+FPW V L      FCGG+I++E+WIVTAAHC+  G    + A + N+  
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEE 60
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCS--SFNNDIALLELTRSIQWSDLIRPACLPSG-- 231
            EH   + +     V+RI+ H +++ +   +N+DIALLEL   +  +  + P C+     
Sbjct: 61  TEHTEQKRN-----VIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEY 115
Query: 232 -SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
            ++     S  V+GWG       +GR + +LQ + + +V    C         K  +  +
Sbjct: 116 TNIFLKFGSGYVSGWGRVFH---KGRSALVLQYLRVPLVDRATCL-----RSTKFTIYNN 167
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAG  +GG+D+C                              Q DSGGP +     ++
Sbjct: 168 MFCAGFHEGGRDSC------------------------------QGDSGGPHVTEVEGTS 197
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISD 383
            + G++S G  CA     G+YT+++RY+ WI +
Sbjct: 198 FLTGIISWGEECAMKGKYGIYTKVSRYVNWIKE 230

>pdb|1PPZ|A Chain A, Trypsin Complexes At Atomic And Ultra-High Resolution Length = 224

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 133/262 (50%), Gaps = 53/262 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG +A+ G+FP+IVS+ R+GG +CGG++++   ++TAAHC+         +Q    ++
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSG------YAQSGFQIR 54
Query: 177 EHDLSRPS---ISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACL-PSGS 232
              LSR S    S++  +R+  HPS+S +  NND+A+L+L+ SI     I  A L  SGS
Sbjct: 55  AGSLSRTSGGITSSLSSVRV--HPSYSGN--NNDLAILKLSTSIPSGGNIGYARLAASGS 110
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
              +  S TVAGWG T+E  S     N+L KV + +VS   C+A Y +      +     
Sbjct: 111 DPVAGSSATVAGWGATSEGGSS-TPVNLL-KVTVPIVSRATCRAQYGTSA----ITNQMF 164
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG   GGKD+C                              Q D GGP++     S  +
Sbjct: 165 CAGVSSGGKDSC------------------------------QGDXGGPIV---DSSNTL 191
Query: 353 IGLVSTGIGCARPRLPGLYTRL 374
           IG VS G GCARP   G+Y  +
Sbjct: 192 IGAVSWGNGCARPNYSGVYASV 213

>pdb|1J15|A Chain A, Benzamidine In Complex With Rat Trypsin Mutant X99175190RT Length = 223

Iteration: 1
 Score =  121 bits (303), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 131/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    ++NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A          + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEA-----SSSFIITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKDAC                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDAC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1XVM|A Chain A, Trypsin From Fusarium Oxysporum- Room Temperature To Atomic Resolution Length = 224

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 133/261 (50%), Gaps = 53/261 (20%)
Query: 118 VGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKE 177
           VGG +A+ G+FP+IVS+ R+GG +CGG++++   ++TAAHC+         +Q    ++ 
Sbjct: 2   VGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSG------YAQSGFQIRA 55
Query: 178 HDLSRPS---ISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACL-PSGSL 233
             LSR S    S++  +R+  HPS+S +  NND+A+L+L+ SI     I  A L  SGS 
Sbjct: 56  GSLSRTSGGITSSLSSVRV--HPSYSGN--NNDLAILKLSTSIPSGGNIGYARLAASGSD 111
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
             +  S TVAGWG T+E  S     N+L KV + +VS   C+A Y +      +     C
Sbjct: 112 PVAGSSATVAGWGATSEGGSS-TPVNLL-KVTVPIVSRATCRAQYGTSA----ITNQMFC 165
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG   GGKD+C                              Q DSGGP++     S  +I
Sbjct: 166 AGVSSGGKDSC------------------------------QGDSGGPIV---DSSNTLI 192
Query: 354 GLVSTGIGCARPRLPGLYTRL 374
           G VS G GCARP   G+Y  +
Sbjct: 193 GAVSWGNGCARPNYSGVYASV 213

>pdb|1SLX|B Chain B, Rat Anionic N143h, E151h Trypsin Complexed To A86h Ecotin; Zinc-Bound Length = 223

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG T    S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWGHTLS--SGVNHPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1K9O|E Chain E, Crystal Structure Of Michaelis Serpin-Trypsin Complex Length = 223

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 132/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q D+GGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDAGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|2WPM|S Chain S, Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Length = 235

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 49/273 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVTL 175
           +VGG  A PG+FPW V L      FCGG+I++E+WIVTAAHC+  G    + A + N+  
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEE 60
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCS--SFNNDIALLELTRSIQWSDLIRPACLPSG-- 231
            EH   + +     V+RI+ H + + +  ++N+DIALLEL   +  +  + P C+     
Sbjct: 61  TEHTEQKRN-----VIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEY 115
Query: 232 -SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
            ++     S  V+GWG       +GR + +LQ + + +V    C         K  +  +
Sbjct: 116 TNIFLKFGSGYVSGWGRVFH---KGRAALVLQYLRVPLVDRATCL-----RSTKFTITNN 167
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAG  +GG+D+C                              Q DSGGP +     ++
Sbjct: 168 MFCAGFHEGGRDSC------------------------------QGDSGGPHVTEVEGTS 197
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISD 383
            + G++S G  CA     G+YT+++RY+ WI +
Sbjct: 198 FLTGIISWGEECAMKGKYGIYTKVSRYVNWIKE 230

>pdb|2WPH|S Chain S, Factor Ixa Superactive Triple Mutant Length = 235

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 49/273 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVTL 175
           +VGG  A PG+FPW V L      FCGG+I++E+WIVTAAHC+  G    + A + N+  
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEE 60
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCS--SFNNDIALLELTRSIQWSDLIRPACLPSG-- 231
            EH   + +     V+RI+ H + + +  ++N+DIALLEL   +  +  + P C+     
Sbjct: 61  TEHTEQKRN-----VIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEY 115
Query: 232 -SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
            ++     S  V+GWG       +GR + +LQ + + +V    C         K  +  +
Sbjct: 116 TNIFLKFGSGYVSGWGRVFH---KGRSALVLQYLRVPLVDRATCL-----RSTKFTITNN 167
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAG  +GG+D+C                              Q DSGGP +     ++
Sbjct: 168 MFCAGFHEGGRDSC------------------------------QGDSGGPHVTEVEGTS 197
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISD 383
            + G++S G  CA     G+YT+++RY+ WI +
Sbjct: 198 FLTGIISWGEECAMKGKYGIYTKVSRYVNWIKE 230

>pdb|1SLW|B Chain B, Rat Anionic N143h, E151h Trypsin Complexed To A86h Ecotin; Nickel- Bound Length = 223

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATIALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG T    S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWGHTLS--SGVNHPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1ANC|A Chain A, Anionic Trypsin Mutant With Ser 214 Replaced By Lys Length = 223

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +V  G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVKWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1FIW|A Chain A, Three-Dimensional Structure Of Beta-Acrosin From Ram Spermatozoa Length = 290

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 134/286 (46%), Gaps = 55/286 (19%)
Query: 117 IVGGLAANPGEFPWIVSLK---RHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
           I+GG  A  G +PW+VSL+    H     H CGG++++ QW++TAAHC       ++  +
Sbjct: 1   IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCF-RIKKKVTDWR 59
Query: 171 INVTLKEHDLS-----RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRP 225
           +    KE +       +P +    V +I+ H  +S SS  NDIAL+++T  +     I P
Sbjct: 60  LIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGP 119
Query: 226 ACLPS--GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA--WYQSE 281
            CLP          Q+  VAGWG+  EN    R S +LQ+  + ++   +C +  WY   
Sbjct: 120 GCLPQFRAGPPRVPQTCWVAGWGFLQENAR--RTSPMLQEARVDLIDLGLCNSTRWYNGR 177
Query: 282 GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
            +  NV     CAG+ +G  D C                              Q DSGGP
Sbjct: 178 IRSTNV-----CAGYPEGKIDTC------------------------------QGDSGGP 202
Query: 342 LMLLGA--ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           LM   +   S  V+G+ S G+GCAR + PG+YT    Y+ WI+  +
Sbjct: 203 LMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKI 248

>pdb|3KCG|H Chain H, Crystal Structure Of The Antithrombin-Factor Ixa- Pentasaccharide Complex Length = 235

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 49/273 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVTL 175
           +VGG  A PG+FPW V L      FCGG+I++E+WIVTAAHC+  G    + A + N+  
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEE 60
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCS--SFNNDIALLELTRSIQWSDLIRPACLPSG-- 231
            EH   + +     V+RI+ H +++ +   +N+DIALLEL   +  +  + P C+     
Sbjct: 61  TEHTEQKRN-----VIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEY 115
Query: 232 -SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
            ++     S  V+GWG       +GR + +LQ + + +V    C         K  +  +
Sbjct: 116 TNIFLKFGSGYVSGWGRVFH---KGRSALVLQYLRVPLVDRATCL-----RSTKFTIYNN 167
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAG  +GG+D+C                              Q D+GGP +     ++
Sbjct: 168 MFCAGFHEGGRDSC------------------------------QGDAGGPHVTEVEGTS 197
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISD 383
            + G++S G  CA     G+YT+++RY+ WI +
Sbjct: 198 FLTGIISWGEECAMKGKYGIYTKVSRYVNWIKE 230

>pdb|1ANB|A Chain A, Anionic Trypsin Mutant With Ser 214 Replaced By Glu Length = 223

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +V  G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVEWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1UTJ|A Chain A, Trypsin Specificity As Elucidated By Lie Calculations, X-Ray Structures And Association Constant Measurements Length = 242

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 133/272 (48%), Gaps = 54/272 (19%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           KIVGG    P   P  VSL   G HFCGG++++E W+V+AAHC          S++ V L
Sbjct: 20  KIVGGYECKPYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KSRVEVRL 70
Query: 176 KEHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            EH++  +  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LP+ S 
Sbjct: 71  GEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SC 129
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
             +    TV+GWG T    S    SN LQ + + ++S   C   Y        +  +  C
Sbjct: 130 APAGTMCTVSGWGNT---MSSTADSNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFC 181
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG+ +GGKD+C                              Q DSGGP++  G    ++ 
Sbjct: 182 AGYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQ 207
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+VS G GCA P  PG+Y ++  +  W++ T+
Sbjct: 208 GVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 239

>pdb|1PFX|C Chain C, Porcine Factor Ixa Length = 235

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 51/274 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A PG+FPW V L      FCGG+II+E+W+VTAAHC+  G       +I V   
Sbjct: 1   IVGGENAKPGQFPWQVLLNGKIDAFCGGSIINEKWVVTAAHCIEPG------VKITVVAG 54
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCS--SFNNDIALLELTRSIQWSDLIRPACLPSG- 231
           E++   + P+     V+R + H S++ +   +++DIALLEL   +  +  + P C+    
Sbjct: 55  EYNTEETEPTEQRRNVIRAIPHHSYNATVNKYSHDIALLELDEPLTLNSYVTPICIADKE 114
Query: 232 --SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
             ++     S  V+GWG      ++GR + ILQ + + +V    C         K  +  
Sbjct: 115 YTNIFLKFGSGYVSGWGRVF---NRGRSATILQYLKVPLVDRATCL-----RSTKFTIYS 166
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           +  CAG  +GGKD+C                              Q DSGGP +     +
Sbjct: 167 NMFCAGFHEGGKDSC------------------------------QGDSGGPHVTEVEGT 196
Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISD 383
           + + G++S G  CA     G+YT+++RY+ WI +
Sbjct: 197 SFLTGIISWGEECAVKGKYGIYTKVSRYVNWIKE 230

>pdb|1DPO|A Chain A, Structure Of Rat Trypsin Length = 223

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q D GGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDCGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1MCT|A Chain A, The Refined 1.6 Angstroms Resolution Crystal Structure Of The Complex Formed Between Porcine Beta-trypsin And Mcti-a, A Trypsin Inhibitor Of Squash Family Length = 223

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 129/271 (47%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCAANSIPYQVSLNS-GSHFCGGSLINSQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EH--DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH  D+   +   +   +I+ HP+ + ++ +NDI L++L+     +  +    LP  S  
Sbjct: 52  EHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +     ++GWG  N   S     ++LQ +   V+SN  C++ Y  +     +  + +C 
Sbjct: 111 AAGTECLISGWG--NTKSSGSSYPSLLQCLKAPVLSNSSCKSSYPGQ-----ITGNMICV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  QGGKD+C                              Q DSGGP++  G    Q+ G
Sbjct: 164 GFLQGGKDSC------------------------------QGDSGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 190 IVSWGYGCAQKNKPGVYTKVCNYVNWIQQTI 220

>pdb|1TRM|A Chain A, The Three-Dimensional Structure Of Asn102 Mutant Of Trypsin. Role Of Asp102 In Serine Protease Catalysis Length = 223

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 132/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NN+I L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNNIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|2XRC|A Chain A, Human Complement Factor I Length = 565

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 132/279 (47%), Gaps = 53/279 (18%)
Query: 113 RTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           R  +IVGG  A  G+ PW V++K   G  CGG  I   WI+TAAHCL    S     QI 
Sbjct: 318 RRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCL--RASKTHRYQIW 375
Query: 173 VTLKE---HDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSD--LIR--P 225
            T+ +    DL R  I  V   RI+FH +++  ++ NDIAL+E+ +     D  L R  P
Sbjct: 376 TTVVDWIHPDLKRIVIEYVD--RIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIP 433
Query: 226 ACLP-SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKK 284
           AC+P S  L     +  V+GWG   +N     R   LQ   + ++SN  C  +Y   G +
Sbjct: 434 ACVPWSPYLFQPNDTCIVSGWGREKDN----ERVFSLQWGEVKLISN--CSKFY---GNR 484
Query: 285 INVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLML 344
              KE + CAG   G  DAC                              + DSGGPL+ 
Sbjct: 485 FYEKEME-CAGTYDGSIDAC------------------------------KGDSGGPLVC 513
Query: 345 LGAES-TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
           + A + T V G+VS G  C +P  PG+YT++  Y  WIS
Sbjct: 514 MDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWIS 552

>pdb|1EZS|C Chain C, Crystal Structure Of Ecotin Mutant M84r, W67a, G68a, Y69a, D70a Bound To Rat Anionic Trypsin Ii Length = 223

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++        V   +I+ HP+    + NN+I L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGDEQFVNAAKIIKHPNFDRKTLNNNIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1ZZZ|A Chain A, Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes Length = 237

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 51/271 (18%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVT 174
           KIVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV 
Sbjct: 14  KIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVV 72
Query: 175 LKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
                    S S V       HPS++ ++ NNDI L++L  +   +  +    LP+    
Sbjct: 73  EGNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS 125
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CA
Sbjct: 126 AGTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCA 177
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 178 GYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG 203
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 204 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 234

>pdb|1G3B|A Chain A, Bovine Beta-Trypsin Bound To Meta-Amidino Schiff Base Magnesium(Ii) Chelate Length = 228

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 51/271 (18%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVT 174
           KIVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV 
Sbjct: 5   KIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVV 63
Query: 175 LKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
                    S S V       HPS++ ++ NNDI L++L  +   +  +    LP+    
Sbjct: 64  EGNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS 116
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CA
Sbjct: 117 AGTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCA 168
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 169 GYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG 194
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 195 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 225

>pdb|1TGS|Z Chain Z, Three-Dimensional Structure Of The Complex Between Pancreatic Secretory Inhibitor (Kazal Type) And Trypsinogen At 1.8 Angstroms Resolution. Structure Solution, Crystallographic Refinement And Preliminary Structural Interpretation Length = 229

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 51/271 (18%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVT 174
           KIVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV 
Sbjct: 6   KIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVV 64
Query: 175 LKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
                    S S V       HPS++ ++ NNDI L++L  +   +  +    LP+    
Sbjct: 65  EGNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS 117
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CA
Sbjct: 118 AGTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCA 169
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 170 GYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG 195
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 196 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 226

>pdb|1AMH|A Chain A, Uncomplexed Rat Trypsin Mutant With Asp 189 Replaced With Ser (D189s) Length = 223

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGK +C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKSSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>pdb|1F0T|A Chain A, Bovine Trypsin Complexed With Rpr131247 Length = 243

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 51/271 (18%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVT 174
           KIVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV 
Sbjct: 20  KIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVV 78
Query: 175 LKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
                    S S V       HPS++ ++ NNDI L++L  +   +  +    LP+    
Sbjct: 79  EGNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS 131
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CA
Sbjct: 132 AGTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCA 183
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 184 GYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG 209
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 210 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 240

>pdb|4AN7|A Chain A, Kunitz Type Trypsin Inhibitor Complex With Porcine Trypsin Length = 231

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 53/272 (19%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           KIVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S+I V L
Sbjct: 8   KIVGGYTCAANSIPYQVSLNS-GSHFCGGSLINSQWVVSAAHCY--------KSRIQVRL 58
Query: 176 KEH--DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            EH  D+   +   +   +I+ HP+ + ++ +NDI L++L+     +  +    LP  S 
Sbjct: 59  GEHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-SC 117
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
             +     ++GWG  N   S     ++LQ +   V+S+  C++ Y  +     +  + +C
Sbjct: 118 AAAGTECLISGWG--NTKSSGSSYPSLLQCLKAPVLSDSSCKSSYPGQ-----ITGNMIC 170
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
            G  +GGKD+C                              Q DSGGP++  G    Q+ 
Sbjct: 171 VGFLEGGKDSC------------------------------QGDSGGPVVCNG----QLQ 196
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 197 GIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTI 228

>pdb|1FY8|E Chain E, Crystal Structure Of The Deltaile16val17 Rat Anionic Trypsinogen-Bpti Complex Length = 231

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 53/269 (19%)
Query: 119 GGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
           GG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L EH
Sbjct: 11  GGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLGEH 61
Query: 179 DLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
           +++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS      
Sbjct: 62  NINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAG 121
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
            Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C G 
Sbjct: 122 TQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCVGF 173
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +GGKD+C                              Q DSGGP++  G    ++ G+V
Sbjct: 174 LEGGKDSC------------------------------QGDSGGPVVCNG----ELQGIV 199
Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 200 SWGYGCALPDNPGVYTKVCNYVDWIQDTI 228

>pdb|1BZX|E Chain E, The Crystal Structure Of Anionic Salmon Trypsin In Complex With Bovine Pancreatic Trypsin Inhibitor Length = 222

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 54/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG    P   P  VSL   G HFCGG++++E W+V+AAHC          S++ V L 
Sbjct: 1   IVGGYECKPYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KSRVEVRLG 51
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++  +  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LP+ S  
Sbjct: 52  EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +    TV+GWG T    S    SN LQ + + ++S   C   Y        +  +  CA
Sbjct: 111 PAGTMCTVSGWGNT---MSSTADSNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+Y ++  +  W++ T+
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219

>pdb|2CGA|A Chain A, Bovine Chymotrypsinogen A. X-Ray Crystal Structure Analysis And Refinement Of A New Crystal Form At 1.8 Angstroms Resolution Length = 245

Iteration: 1
 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 130/272 (47%), Gaps = 46/272 (16%)
Query: 116 KIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           +IV G  A PG +PW VSL+ + G HFCGG++I+E W+VTAAHC       + A +    
Sbjct: 15  RIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSDVVVAGEF--- 71
Query: 175 LKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
             +   S   I  + + ++  +  ++  + NNDI LL+L+ +  +S  +   CLPS S D
Sbjct: 72  --DQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDD 129
Query: 235 YSEQSVTV-AGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
           ++  +  V  GWG T    +     + LQ+ +L ++SN  C+ ++   G KI  K++ +C
Sbjct: 130 FAAGTTCVTTGWGLTRY--TNANTPDRLQQASLPLLSNTNCKKYW---GTKI--KDAMIC 182
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG    G  +C                                DSGGPL+     +  ++
Sbjct: 183 AGAS--GVSSC------------------------------MGDSGGPLVCKKNGAWTLV 210
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+VS G        PG+Y R+T  + W+  TL
Sbjct: 211 GIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 242

>pdb|3VEQ|B Chain B, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A Engineered Mutant Trypsin Inhibitor Length = 223

Iteration: 1
 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 127/270 (47%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASVSLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCAG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1Y59|T Chain T, Dianhydrosugar-Based Benzamidine, Factor Xa Specific Inhibitor In Complex With Bovine Trypsin Mutant Length = 223

Iteration: 1
 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 127/270 (47%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1DLK|B Chain B, Crystal Structure Analysis Of Delta-Chymotrypsin Bound To A Peptidyl Chloromethyl Ketone Inhibitor Length = 230

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 46/271 (16%)
Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IV G  A PG +PW VSL+ + G HFCGG++I+E W+VTAAHC       + A +     
Sbjct: 1   IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSDVVVAGEF---- 56
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
            +   S   I  + + ++  +  ++  + NNDI LL+L+ +  +S  +   CLPS S D+
Sbjct: 57  -DQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDF 115
Query: 236 SEQSVTV-AGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
           +  +  V  GWG T    +     + LQ+ +L ++SN  C+ ++   G KI  K++ +CA
Sbjct: 116 AAGTTCVTTGWGLTRY--TNANTPDRLQQASLPLLSNTNCKKYW---GTKI--KDAMICA 168
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G    G  +C                                DSGGPL+     +  ++G
Sbjct: 169 GAS--GVSSC------------------------------MGDSGGPLVCKKNGAWTLVG 196
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G        PG+Y R+T  + W+  TL
Sbjct: 197 IVSWGSSTCSTSTPGVYARVTALVNWVQQTL 227

>pdb|1OPH|B Chain B, Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh And S195a Trypsin Length = 243

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 51/271 (18%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVT 174
           KIVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV 
Sbjct: 20  KIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVV 78
Query: 175 LKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
                    S S V       HPS++ ++ NNDI L++L  +   +  +    LP+    
Sbjct: 79  EGNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS 131
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CA
Sbjct: 132 AGTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCA 183
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q D+GGP++  G    ++ G
Sbjct: 184 GYLEGGKDSC------------------------------QGDAGGPVVCSG----KLQG 209
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 210 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 240

>pdb|1FIZ|A Chain A, Three Dimensional Structure Of Beta-Acrosin From Boar Spermatozoa Length = 263

Iteration: 1
 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 130/285 (45%), Gaps = 53/285 (18%)
Query: 117 IVGGLAANPGEFPWIVSLK------RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
           +VGG++A PG +PW+VSL+          H CGG +++  W++TAAHC  N         
Sbjct: 1   VVGGMSAEPGAWPWMVSLQIFMYHNNRRYHTCGGILLNSHWVLTAAHCFKNKKKVTDWRL 60
Query: 171 I----NVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPA 226
           I     V    +   +P +    V  I+ H  +      NDIAL+++T  +     I P 
Sbjct: 61  IFGANEVVWGSNKPVKPPLQERFVEEIIIHEKYVSGLEINDIALIKITPPVPCGPFIGPG 120
Query: 227 CLP--SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA--WYQSEG 282
           CLP        + Q+  V GWG+  E     R S  LQ+  ++++  ++C +  WY    
Sbjct: 121 CLPQFKAGPPRAPQTCWVTGWGYLKE--KGPRTSPTLQEARVALIDLELCNSTRWYNGR- 177
Query: 283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL 342
               ++ + +CAG+ +G  D C                              Q DSGGPL
Sbjct: 178 ----IRSTNVCAGYPRGKIDTC------------------------------QGDSGGPL 203
Query: 343 MLLG-AEST-QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           M    AE+T  V+G+ S G+GCAR + PG+YT    Y+ WI+  +
Sbjct: 204 MCRDRAENTFVVVGITSWGVGCARAKRPGVYTSTWPYLNWIASKI 248

>pdb|1F5R|A Chain A, Rat Trypsinogen Mutant Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 231

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 130/269 (48%), Gaps = 53/269 (19%)
Query: 119 GGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
           GG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L EH
Sbjct: 11  GGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLGEH 61
Query: 179 DLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
           +++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS      
Sbjct: 62  NINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAG 121
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
            Q + ++GWG  N   S     ++L+ +   ++    C+A Y  +     + ++ +C G 
Sbjct: 122 TQCL-ISGWG--NTLSSGVNEPDLLKCLDAPLLPQADCEASYPGK-----ITDNMVCVGF 173
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +GGKD+C                              Q DSGGP++  G    ++ G+V
Sbjct: 174 LEGGKDSC------------------------------QGDSGGPVVCNG----ELQGIV 199
Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 200 SWGYGCALPDNPGVYTKVCNYVDWIQDTI 228

>pdb|1TAB|E Chain E, Structure Of The Trypsin-Binding Domain Of Bowman-Birk Type Protease Inhibitor And Its Interaction With Trypsin Length = 223

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 127/270 (47%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1MBQ|A Chain A, Anionic Trypsin From Pacific Chum Salmon Length = 220

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 131/271 (48%), Gaps = 54/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P  VSL   G HFCGG++++E W+V+AAHC          S++ V L 
Sbjct: 1   IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KSRVEVRLG 51
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++  +  S   +   R++ HP++S  + +NDI L++L++S   +  ++P  LPS S  
Sbjct: 52  EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKSATLNTYVQPVALPS-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +    TV+GWG T    S     N LQ + + ++S   C   Y        +  +  CA
Sbjct: 111 PAGTMCTVSGWGNT---MSSTADKNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+Y ++  +  W++ T+
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219

>pdb|1TFX|A Chain A, Complex Of The Second Kunitz Domain Of Tissue Factor Pathway Inhibitor With Porcine Trypsin Length = 223

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCAANSIPYQVSLNS-GSHFCGGSLINSQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EH--DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH  D+   +   +   +I+ HP+ + ++ +NDI L++L+     +  +    LP  S  
Sbjct: 52  EHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +     ++GWG  N   S     ++LQ +   V+S+  C++ Y  +     +  + +C 
Sbjct: 111 AAGTECLISGWG--NTKSSGSSYPSLLQCLKAPVLSDSSCKSSYPGQ-----ITGNMICV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    Q+ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 190 IVSWGYGCAQKNKPGVYTKVCNYVNWIQQTI 220

>pdb|3MYW|A Chain A, The Bowman-Birk Type Inhibitor From Mung Bean In Ternary Complex With Porcine Trypsin Length = 223

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCAANSVPYQVSLNS-GSHFCGGSLINSQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EH--DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH  D+   +   +   +I+ HP+ + ++ +NDI L++L+     +  +    LP  S  
Sbjct: 52  EHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +     ++GWG  N   S     ++LQ +   V+S+  C++ Y  +     +  + +C 
Sbjct: 111 AAGTECLISGWG--NTKSSGSSYPSLLQCLKAPVLSDSSCKSAYPGQ-----ITGNMICV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    Q+ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 190 IVSWGYGCAQKNKPGVYTKVCNYVNWIQQTI 220

>pdb|3TGK|E Chain E, Trypsinogen Mutant D194n And Deletion Of Ile 16-Val 17 Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 231

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 130/269 (48%), Gaps = 53/269 (19%)
Query: 119 GGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
           GG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L EH
Sbjct: 11  GGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLGEH 61
Query: 179 DLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
           +++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS      
Sbjct: 62  NINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAG 121
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
            Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C G 
Sbjct: 122 TQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCVGF 173
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +GGKD+C                              Q +SGGP++  G    ++ G+V
Sbjct: 174 LEGGKDSC------------------------------QGNSGGPVVCNG----ELQGIV 199
Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 200 SWGYGCALPDNPGVYTKVCNYVDWIQDTI 228

>pdb|2FI4|E Chain E, Crystal Structure Of A Bpti Variant (Cys14->ser) In Complex With Trypsin Length = 223

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +      +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLXSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1TAW|A Chain A, Bovine Trypsin Complexed To Appi Length = 223

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S   C++ Y  +     +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSTSSCKSAYPGQ-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|3T2N|A Chain A, Human Hepsin Protease In Complex With The Fab Fragment Of An Inhibitory Antibody Length = 372

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 142/309 (45%), Gaps = 58/309 (18%)
Query: 100 IAGVPCGRSLAS------RR---TGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQ 150
           +   P GR LA+      RR     +IVGG   + G +PW VSL+  G H CGG+++   
Sbjct: 92  VCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGD 151
Query: 151 WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSH------SCSSF 204
           W++TAAHC       LS  ++         + P    + V  +++H  +      +    
Sbjct: 152 WVLTAAHCFPERNRVLSRWRVFAGAVAQ--ASPHGLQLGVQAVVYHGGYLPFRDPNSEEN 209
Query: 205 NNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQK 263
           +NDIAL+ L+  +  ++ I+P CLP+      +  + TV GWG T      G+++ +LQ+
Sbjct: 210 SNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ---YYGQQAGVLQE 266
Query: 264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPS 323
             + ++SN VC     ++     +K    CAG+ +GG DAC                   
Sbjct: 267 ARVPIISNDVCNG---ADFYGNQIKPKMFCAGYPEGGIDAC------------------- 304
Query: 324 HRSGVHWDPPLQADSGGPLMLLGAEST----QVIGLVSTGIGCARPRLPGLYTRLTRYIG 379
                      Q DSGGP +   + S     ++ G+VS G GCA  + PG+YT+++ +  
Sbjct: 305 -----------QGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFRE 353
Query: 380 WISDTLDIH 388
           WI   +  H
Sbjct: 354 WIFQAIKTH 362

>pdb|1Z8G|A Chain A, Crystal Structure Of The Extracellular Region Of The Transmembrane Serine Protease Hepsin With Covalently Bound Preferred Substrate Length = 372

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 142/309 (45%), Gaps = 58/309 (18%)
Query: 100 IAGVPCGRSLAS------RR---TGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQ 150
           +   P GR LA+      RR     +IVGG   + G +PW VSL+  G H CGG+++   
Sbjct: 92  VCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGD 151
Query: 151 WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSH------SCSSF 204
           W++TAAHC       LS  ++         + P    + V  +++H  +      +    
Sbjct: 152 WVLTAAHCFPERNRVLSRWRVFAGAVAQ--ASPHGLQLGVQAVVYHGGYLPFRDPNSEEN 209
Query: 205 NNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQK 263
           +NDIAL+ L+  +  ++ I+P CLP+      +  + TV GWG T      G+++ +LQ+
Sbjct: 210 SNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQ---YYGQQAGVLQE 266
Query: 264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPS 323
             + ++SN VC     ++     +K    CAG+ +GG DAC                   
Sbjct: 267 ARVPIISNDVCNG---ADFYGNQIKPKMFCAGYPEGGIDAC------------------- 304
Query: 324 HRSGVHWDPPLQADSGGPLMLLGAEST----QVIGLVSTGIGCARPRLPGLYTRLTRYIG 379
                      Q DSGGP +   + S     ++ G+VS G GCA  + PG+YT+++ +  
Sbjct: 305 -----------QGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFRE 353
Query: 380 WISDTLDIH 388
           WI   +  H
Sbjct: 354 WIFQAIKTH 362

>pdb|1A0J|A Chain A, Crystal Structure Of A Non-Psychrophilic Trypsin From A Cold-Adapted Fish Species. Length = 223

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 130/271 (47%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG         +  SL+  G HFCGG++I   W+V+AAHC          S+I V L 
Sbjct: 1   IVGGYECRKNSASYQASLQS-GYHFCGGSLISSTWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   +  ++++ HPS++  + +NDI L++L++    +  +    LPS S  
Sbjct: 52  EHNIAVNEGTEQFIDSVKVIMHPSYNSRNLDNDIMLIKLSKPASLNSYVSTVALPS-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            S     V+GWG  N + S     + L+ + L ++S+  C + Y  +     +  +  CA
Sbjct: 111 SSGTRCLVSGWG--NLSGSSSNYPDTLRCLDLPILSSSSCNSAYPGQ-----ITSNMFCA 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    Q+ G
Sbjct: 164 GFMEGGKDSC------------------------------QGDSGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y  WIS T+
Sbjct: 190 VVSWGYGCAQRNKPGVYTKVCNYRSWISSTM 220

>pdb|2ZPR|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 2 From Chum Salmon Length = 222

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 133/274 (48%), Gaps = 54/274 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P  VSL   G HFCGG++++E W+V+AAHC          S++ V L 
Sbjct: 1   IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KSRVAVRLG 51
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++  +  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LPS S  
Sbjct: 52  EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPS-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +    TV+GWG T  + + G +   LQ + + ++S   C   Y        +  +  CA
Sbjct: 111 PAGTMCTVSGWGNTMSSTADGDK---LQCLNIPILSYSDCNNSYPGM-----ITNAMFCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
           +VS G GCA P  PG+Y ++  +  W++ T+  +
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMATY 222

>pdb|1BRB|E Chain E, Crystal Structures Of Rat Anionic Trypsin Complexed With The Protein Inhibitors Appi And Bpti Length = 223

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 130/271 (47%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH+++    +   V   +I+ HP+    + NNDI L++L+  ++ +  +    LPS    
Sbjct: 52  EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++LQ +   ++    C+A Y  +     + ++ +C 
Sbjct: 112 AGTQCL-ISGWG--NTLSSGVNEPDLLQCLDAPLLPQADCEASYPGK-----ITDNMVCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGK +C                              Q DSGGP++  G    ++ G
Sbjct: 164 GFLEGGKGSC------------------------------QGDSGGPVVCNG----ELQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  P +YT++  Y+ WI DT+
Sbjct: 190 IVSWGYGCALPDNPDVYTKVCNYVDWIQDTI 220

>pdb|1AN1|E Chain E, Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Length = 223

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCAANSIPYQVSLNS-GSHFCGGSLINSQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EH--DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH  D+   +   +   +I+ HP+ + ++ +NDI L++L+        +    LP  S  
Sbjct: 52  EHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLXSRVATVSLPR-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +     ++GWG  N   S     ++LQ +   V+S+  C++ Y  +     +  + +C 
Sbjct: 111 AAGTECLISGWG--NTKSSGSSYPSLLQCLKAPVLSDSSCKSSYPGQ-----ITGNMICV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    Q+ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 190 IVSWGYGCAQKNKPGVYTKVCNYVNWIQQTI 220

>pdb|1O5E|H Chain H, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (ala190 Upa) Length = 255

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 49/283 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG   + G +PW VSL+  G H CGG+++   W++TAAHC       LS  ++     
Sbjct: 1   IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAV 60
Query: 177 EHDLSRPSISTVPVLRIMFHPSH------SCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
               + P    + V  +++H  +      +    +NDIAL+ L+  +  ++ I+P CLP+
Sbjct: 61  AQ--ASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPA 118
Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
                 +  + TV GWG T      G+++ +LQ+  + ++SN VC     ++     +K 
Sbjct: 119 AGQALVDGKICTVTGWGNTQ---YYGQQAGVLQEARVPIISNDVCNG---ADFYGNQIKP 172
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
              CAG+ +GG DAC                              Q DSGGP +   + S
Sbjct: 173 KMFCAGYPEGGIDAC------------------------------QGDSGGPFVCEDSIS 202
Query: 350 T----QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
                ++ G+VS G GCA  + PG+YT+++ +  WI   +  H
Sbjct: 203 RTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTH 245

>pdb|1HJ8|A Chain A, 1.00 Aa Trypsin From Atlantic Salmon Length = 222

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 54/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P  VSL   G HFCGG++++E W+V+AAHC          S++ V L 
Sbjct: 1   IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KSRVEVRLG 51
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++  +  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LP+ S  
Sbjct: 52  EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +    TV+GWG T    S    SN LQ + + ++S   C   Y        +  +  CA
Sbjct: 111 PAGTMCTVSGWGNT---MSSTADSNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+Y ++  +  W++ T+
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219

>pdb|5PTP|A Chain A, Structure Of Hydrolase (Serine Proteinase) Length = 223

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q D GGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDXGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|3OTJ|E Chain E, A Crystal Structure Of Trypsin Complexed With Bpti (Bovine Pancreatic Trypsin Inhibitor) By X-RayNEUTRON JOINT REFINEMENT Length = 223

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 51/269 (18%)
Query: 118 VGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTLK 176
           VGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV   
Sbjct: 2   VGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEG 60
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
                  S S V       HPS++ ++ NNDI L++L  +   +  +    LP+      
Sbjct: 61  NEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAG 113
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
            Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG+
Sbjct: 114 TQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAGY 165
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +GGKD+C                              Q DSGGP++  G    ++ G+V
Sbjct: 166 LEGGKDSC------------------------------QGDSGGPVVCSG----KLQGIV 191
Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 192 SWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|2D8W|A Chain A, Structure Of Hyper-Vil-Trypsin Length = 223

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 129/271 (47%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S I V L 
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHC--------XKSGIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           E +++    +   +   + + HPS++ ++ NNDI L++L  +   +  +    LP+    
Sbjct: 52  EDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CA
Sbjct: 112 AGTQCL-ISGWG--NTKSSGTSXPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCA 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GXLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 190 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|2OQ5|A Chain A, Crystal Structure Of Desc1, A New Member Of The Type Ii Transmembrane Serine Proteinases Family Length = 232

Iteration: 1
 Score =  115 bits (287), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 45/274 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLS-ASQINVTL 175
           IVGG     GE+PW  SL+  G H CG T+I+  W+V+AAHC     +P    +   VT+
Sbjct: 1   IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTI 60
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
           K   + R       + RI+ H  +   S + DI+L EL+  + +++ +   CLP  S ++
Sbjct: 61  KPSKMKR------GLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEF 114
Query: 236 SEQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
               V  V G+G    +   G   N L++  ++++    C    + +     +    +CA
Sbjct: 115 QPGDVMFVTGFGALKND---GYSQNHLRQAQVTLIDATTCN---EPQAYNDAITPRMLCA 168
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST-QVI 353
           G  +G  DAC                              Q DSGGPL+   A     + 
Sbjct: 169 GSLEGKTDAC------------------------------QGDSGGPLVSSDARDIWYLA 198
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
           G+VS G  CA+P  PG+YTR+T    WI+    I
Sbjct: 199 GIVSWGDECAKPNKPGVYTRVTALRDWITSKTGI 232

>pdb|2A31|A Chain A, Trypsin In Complex With Borate Length = 223

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 53/270 (19%)
Query: 118 VGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKE 177
           VGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S+I V L E
Sbjct: 2   VGGYTCAANSIPYQVSLNS-GSHFCGGSLINSQWVVSAAHCY--------KSRIQVRLGE 52
Query: 178 H--DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
           H  D+   +   +   +I+ HP+ + ++ +NDI L++L+     +  +    LP  S   
Sbjct: 53  HNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-SCAA 111
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
           +     ++GWG  N   S     ++LQ +   V+S+  C++ Y  +     +  + +C G
Sbjct: 112 AGTECLISGWG--NTKSSGSSYPSLLQCLKAPVLSDSSCKSSYPGQ-----ITGNMICVG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
             +GGKD+C                              Q DSGGP++  G    Q+ G+
Sbjct: 165 FLEGGKDSC------------------------------QGDSGGPVVCNG----QLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGYGCAQKNKPGVYTKVCNYVNWIQQTI 220

>pdb|2ZPQ|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 1 From Chum Salmon Length = 222

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 54/274 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P  VSL   G HFCGG++++E W+V+AAHC          S++ V L 
Sbjct: 1   IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KSRVEVRLG 51
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++  +  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LPS S  
Sbjct: 52  EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPS-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +    TV+GWG T    S     N LQ + + ++S   C   Y        +  +  CA
Sbjct: 111 PAGTMCTVSGWGNT---MSSTADKNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
           +VS G GCA P  PG+Y ++  +  W++ T+  +
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMATY 222

>pdb|4IGD|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-1 Length = 406

Iteration: 1
 Score =  114 bits (286), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 124/298 (41%), Gaps = 55/298 (18%)
Query: 99  PIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGH-FCGGTIIHEQWIVTAAH 157
           P+ G+P     + +   +I  G  A  G  PWI  L    G  FCGG+++   WIVTAAH
Sbjct: 141 PVCGLP---KFSRKLMAQIFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAH 197
Query: 158 CLCNGPSP----------LSASQINVTLKEH--DLSRPSISTVPVLRIMFHPSHSCSSFN 205
           CL     P          LS S   + L +H    S  +   + V     HP +  ++F 
Sbjct: 198 CLHQSLDPEDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFE 257
Query: 206 NDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVA 265
           ND+AL+EL  S   +  + P CLP G        V V+GWG         R    L ++ 
Sbjct: 258 NDVALVELLESPVLNAFVMPICLPEGPQQEGAM-VIVSGWG----KQFLQRFPETLMEIE 312
Query: 266 LSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHR 325
           + +V +  CQ  Y    KK  V    +CAG ++GGKDAC                     
Sbjct: 313 IPIVDHSTCQKAYAPLKKK--VTRDMICAGEKEGGKDAC--------------------- 349
Query: 326 SGVHWDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
                      DSGGP++ L  E  Q  ++G VS G  C +    G+Y+ +     WI
Sbjct: 350 ---------AGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWI 398

>pdb|2ZPS|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 3 From Chum Salmon Length = 222

Iteration: 1
 Score =  114 bits (285), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 54/274 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P  VSL   G HFCGG++++E W+V+AAHC          +++ V L 
Sbjct: 1   IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KTRVEVRLG 51
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++  +  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LPS S  
Sbjct: 52  EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPS-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +    TV+GWG T    S     N LQ + + ++S   C   Y        +  +  CA
Sbjct: 111 PAGTMCTVSGWGNT---MSSTADKNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
           +VS G GCA P  PG+Y ++  +  W++ T+  +
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFNNWLTSTMATY 222

>pdb|1BIT|A Chain A, The Crystal Structure Of Anionic Salmon Trypsin In A Second Crystal Form Length = 237

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 131/272 (48%), Gaps = 54/272 (19%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           KIVGG           VSL   G HFCGG++++E W+V+AAHC          S++ V L
Sbjct: 15  KIVGGYECKAYSQAHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KSRVEVRL 65
Query: 176 KEHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            EH++  +  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LP+ S 
Sbjct: 66  GEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SC 124
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
             +    TV+GWG T    S    SN LQ + + ++S   C   Y        +  +  C
Sbjct: 125 APAGTMCTVSGWGNT---MSSTADSNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFC 176
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG+ +GGKD+C                              Q DSGGP++  G    ++ 
Sbjct: 177 AGYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQ 202
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+VS G GCA P  PG+Y ++  +  W++ T+
Sbjct: 203 GVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 234

>pdb|1NTP|A Chain A, Use Of The Neutron Diffraction HD EXCHANGE TECHNIQUE TO Determine The Conformational Dynamics Of Trypsin Length = 223

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 51/269 (18%)
Query: 118 VGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTLK 176
           VGG        P+ VSL   G HFCGG++I  QW+V+AAHC  +G    L    INV   
Sbjct: 2   VGGYTCGANTVPYQVSL-NSGYHFCGGSLIDSQWVVSAAHCYKSGIQVRLGEDNINVVEG 60
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
                  S S V       HPS+  ++ NNDI L++L  +      +    LP+      
Sbjct: 61  NEQFISASKSIV-------HPSYDSNTLNNDIMLIKLKSAASLDSRVASISLPTSCASAG 113
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
            Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG+
Sbjct: 114 TQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAGY 165
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +GGKD+C                              Q DSGGP++  G    ++ G+V
Sbjct: 166 LEGGKDSC------------------------------QGDSGGPVVCSG----KLQGIV 191
Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 192 SWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|3QK1|A Chain A, Crystal Structure Of Enterokinase-Like Trypsin Variant Length = 229

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++    NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNKRRKNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1TRN|A Chain A, Crystal Structure Of Human Trypsin 1: Unexpected Phosphorylation Of Tyrosine 151 Length = 224

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+EQW+V+A HC          S+I V L 
Sbjct: 1   IVGGYNCEENSVPYQVSLNS-GYHFCGGSLINEQWVVSAGHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++     +   +   +I+ HP +   + NNDI L++L+     +  +    LP+    
Sbjct: 52  EHNIEVLEGNEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAPPA 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              + + ++GWG  N   S     + LQ +   V+S   C+A Y  +     +  +  C 
Sbjct: 112 TGTKCL-ISGWG--NTASSGADXPDELQCLDAPVLSQAKCEASYPGK-----ITSNMFCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    Q+ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDSGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI +T+
Sbjct: 190 VVSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 220

>pdb|1FDP|A Chain A, Proenzyme Of Human Complement Factor D, Recombinant Profactor D Length = 235

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 54/277 (19%)
Query: 115 GKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           G+I+GG  A     P++ S++ +G H CGG ++ EQW+++AAHCL +     +  ++ V 
Sbjct: 6   GRILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDA----ADGKVQVL 61
Query: 175 LKEHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
           L  H LS+P  S     VLR + HP     + ++D+ LL+L+        +RP  LP   
Sbjct: 62  LGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRP--LPWQR 119
Query: 233 LDYSEQSVT---VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
           +D      T   VAGWG  N     GRR + LQ V L V+    C      +G    + E
Sbjct: 120 VDRDVAPGTLCDVAGWGIVNH---AGRRPDSLQHVLLPVLDRATCNRRTHHDGA---ITE 173
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
             MCA  E   +D+C                              + DSGGPL+  G   
Sbjct: 174 RLMCA--ESNRRDSC------------------------------KGDSGGPLVCGGV-- 199
Query: 350 TQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
             + G+V++G   C   + PG+YTR+  Y  WI   L
Sbjct: 200 --LEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 234

>pdb|2RA3|A Chain A, Human Cationic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (bpti) Length = 224

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+EQW+V+A HC          S+I V L 
Sbjct: 1   IVGGYNCEENSVPYQVSLNS-GYHFCGGSLINEQWVVSAGHCY--------KSRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++     +   +   +I+ HP +   + NNDI L++L+     +  +    LP+    
Sbjct: 52  EHNIEVLEGNEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINAHVSTISLPTAPPA 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              + + ++GWG  N   S     + LQ +   V+S   C+A Y  +     +  +  C 
Sbjct: 112 TGTKCL-ISGWG--NTASSGADYPDELQCLDAPVLSQAKCEASYPGK-----ITSNMFCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q D+GGP++  G    Q+ G
Sbjct: 164 GFLEGGKDSC------------------------------QGDAGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI +T+
Sbjct: 190 VVSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 220

>pdb|1YBW|A Chain A, Protease Domain Of Hgfa With No Inhibitor Length = 283

Iteration: 1
 Score =  111 bits (277), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 49/291 (16%)
Query: 105 CGRSLASRR--TGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNG 162
           CGR    R     +I+GG ++ PG  PW+ ++   G  FC G+++H  W+V+AAHC  + 
Sbjct: 22  CGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYI-GDSFCAGSLVHTCWVVSAAHCFSHS 80
Query: 163 PSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFN---NDIALLELT----R 215
           P       ++V L +H  +R +  T       + P    S FN   +D+ L+ L     R
Sbjct: 81  P---PRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 137
Query: 216 SIQWSDLIRPACLPS-GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC 274
               S  ++P CLP  GS   +     +AGWG  +EN S    S+ L++  + +V++  C
Sbjct: 138 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSG--YSSSLREALVPLVADHKC 195
Query: 275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPL 334
            +    E    ++  + +CAG+     DAC                              
Sbjct: 196 SS---PEVYGADISPNMLCAGYFDCKSDAC------------------------------ 222
Query: 335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           Q DSGGPL         + G++S G GC R   PG+YTR+  Y+ WI+D +
Sbjct: 223 QGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 273

>pdb|3GOV|B Chain B, Crystal Structure Of The Catalytic Region Of Human Masp-1 Length = 251

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 116/280 (41%), Gaps = 52/280 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH-FCGGTIIHEQWIVTAAHCLCNGPSP---------- 165
           I  G  A  G  PWI  L    G  FCGG+++   WIVTAAHCL     P          
Sbjct: 1   IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDL 60
Query: 166 LSASQINVTLKEHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI 223
           LS S   + L +H   R   +   + V     HP +  ++F ND+AL+EL  S   +  +
Sbjct: 61  LSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFV 120
Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
            P CLP G        V V+GWG         R    L ++ + +V +  CQ  Y    K
Sbjct: 121 MPICLPEGPQQEGAM-VIVSGWG----KQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKK 175
Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
           K  V    +CAG ++GGKDAC                                DSGGP++
Sbjct: 176 K--VTRDMICAGEKEGGKDAC------------------------------AGDSGGPMV 203
Query: 344 LLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
            L  E  Q  ++G VS G  C +    G+Y+ +     WI
Sbjct: 204 TLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWI 243

>pdb|2TBS|A Chain A, Cold-Adaption Of Enzymes: Structural Comparison Between Salmon And Bovine Trypsins Length = 222

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 130/271 (47%), Gaps = 54/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG           VSL   G HFCGG++++E W+V+AAHC          S++ V L 
Sbjct: 1   IVGGYECKAYSQAHQVSLNS-GYHFCGGSLVNENWVVSAAHCY--------KSRVEVRLG 51
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++  +  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LP+ S  
Sbjct: 52  EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +    TV+GWG T    S    S+ LQ + + ++S   C   Y        +  +  CA
Sbjct: 111 PAGTMCTVSGWGNT---MSSTADSDKLQCLNIPILSYSDCNDSYPGM-----ITNAMFCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA P  PG+Y ++  +  W++ T+
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFSDWLTSTM 219

>pdb|2XWA|A Chain A, Crystal Structure Of Complement Factor D Mutant R202a Length = 228

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 124/275 (45%), Gaps = 54/275 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  A     P++ S++ +G H CGG ++ EQW+++AAHCL +     +  ++ V L 
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDA----ADGKVQVLLG 56
Query: 177 EHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H LS+P  S     VLR + HP     + ++D+ LL+L+        +RP  LP   +D
Sbjct: 57  AHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRP--LPWQRVD 114
Query: 235 YSEQSVT---VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                 T   VAGWG  N     GRR + LQ V L V+    C      +G    + E  
Sbjct: 115 RDVAPGTLCDVAGWGIVNH---AGRRPDSLQHVLLPVLDRATCNRRTHHDGA---ITERL 168
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           MCA  E   +D+C                              + DSGGPL+  G     
Sbjct: 169 MCA--ESNRRDSC------------------------------KGDSGGPLVCGGV---- 192
Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           + G+V++G   C   + PG+YTR+  Y  WI   L
Sbjct: 193 LEGVVTSGSAVCGNRKKPGIYTRVASYAAWIDSVL 227

>pdb|3UNQ|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 121/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG YT+L  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGFYTKLCNYVSWIKQTI 220

>pdb|2WUB|A Chain A, Crystal Structure Of Hgfa In Complex With The Allosteric Non-Inhibitory Antibody Fab40.Deltatrp Length = 257

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG ++ PG  PW+ ++   G  FC G+++H  W+V+AAHC  + P       ++V L 
Sbjct: 1   IIGGSSSLPGSHPWLAAIYI-GDSFCAGSLVHTCWVVSAAHCFSHSP---PRDSVSVVLG 56
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFN---NDIALLEL----TRSIQWSDLIRPACLP 229
           +H  +R +  T       + P    S FN   +D+ L+ L     R    S  ++P CLP
Sbjct: 57  QHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLP 116
Query: 230 S-GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
             GS   +     +AGWG  +EN S    S+ L++  + +V++  C +    E    ++ 
Sbjct: 117 EPGSTFPAGHKCQIAGWGHLDENVSG--YSSSLREALVPLVADHKCSS---PEVYGADIS 171
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
            + +CAG+     DAC                              Q DSGGPL      
Sbjct: 172 PNMLCAGYFDCKSDAC------------------------------QGDSGGPLACEKNG 201
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              + G++S G GC R   PG+YTR+  Y+ WI+D +
Sbjct: 202 VAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 238

>pdb|2R0L|A Chain A, Short Form Hgfa With Inhibitory Fab75 Length = 248

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG ++ PG  PW+ ++   G  FC G+++H  W+V+AAHC  + P       ++V L 
Sbjct: 1   IIGGSSSLPGSHPWLAAIYI-GDSFCAGSLVHTCWVVSAAHCFSHSP---PRDSVSVVLG 56
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFN---NDIALLEL----TRSIQWSDLIRPACLP 229
           +H  +R +  T       + P    S FN   +D+ L+ L     R    S  ++P CLP
Sbjct: 57  QHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLP 116
Query: 230 S-GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
             GS   +     +AGWG  +EN S    S+ L++  + +V++  C +    E    ++ 
Sbjct: 117 EPGSTFPAGHKCQIAGWGHLDENVSG--YSSSLREALVPLVADHKCSS---PEVYGADIS 171
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
            + +CAG+     DAC                              Q DSGGPL      
Sbjct: 172 PNMLCAGYFDCKSDAC------------------------------QGDSGGPLACEKNG 201
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              + G++S G GC R   PG+YTR+  Y+ WI+D +
Sbjct: 202 VAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 238

>pdb|1DST|A Chain A, Mutant Of Factor D With Enhanced Catalytic Activity Length = 228

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 124/275 (45%), Gaps = 54/275 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  A     P++ S++ +G H CGG ++ EQW+++AAHCL +     +  ++ V L 
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDA----ADGKVQVLLG 56
Query: 177 EHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H LS+P  S     VLR + HP +   + ++D+ LL+L+        +RP  LP   +D
Sbjct: 57  AHSLSQPEPSKRLYDVLRAVPHPDYQPDTIDHDLLLLQLSEKATLGPAVRP--LPWQRVD 114
Query: 235 YSEQSVT---VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                 T   VAGWG  N     GRR + LQ V L V+    C      +G    + E  
Sbjct: 115 RDVAPGTLCDVAGWGIVNH---AGRRPDSLQHVLLPVLDRATCNRRTHHDGA---ITERL 168
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           MCA  E   +D+C                              + DSGGPL+  G     
Sbjct: 169 MCA--ESNRRDSC------------------------------KGDSGGPLVCGGV---- 192
Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           + G+VS G   C   + PG+YTR+  Y  WI   L
Sbjct: 193 LEGVVSWGSRVCGNRKKPGIYTRVASYAAWIDSVL 227

>pdb|1DSU|A Chain A, Human Factor D, Complement Activating Enzyme Length = 228

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 124/275 (45%), Gaps = 54/275 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  A     P++ S++ +G H CGG ++ EQW+++AAHCL +     +  ++ V L 
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDA----ADGKVQVLLG 56
Query: 177 EHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H LS+P  S     VLR + HP     + ++D+ LL+L+        +RP  LP   +D
Sbjct: 57  AHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRP--LPWQRVD 114
Query: 235 YSEQSVT---VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                 T   VAGWG  N     GRR + LQ V L V+    C      +G    + E  
Sbjct: 115 RDVAPGTLCDVAGWGIVNH---AGRRPDSLQHVLLPVLDRATCNRRTHHDGA---ITERL 168
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           MCA  E   +D+C                              + DSGGPL+  G     
Sbjct: 169 MCA--ESNRRDSC------------------------------KGDSGGPLVCGGV---- 192
Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           + G+V++G   C   + PG+YTR+  Y  WI   L
Sbjct: 193 LEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227

>pdb|1H4W|A Chain A, Structure Of Human Trypsin Iv (Brain Trypsin) Length = 224

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I EQW+V+AAHC          ++I V L 
Sbjct: 1   IVGGYTCEENSLPYQVSLNS-GSHFCGGSLISEQWVVSAAHCY--------KTRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++     +   +  ++I+ HP ++  + +NDI L++L+     +  +    LP+    
Sbjct: 52  EHNIKVLEGNEQFINAVKIIRHPKYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPA 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              + + ++GWG  N         + L+ +   V++   C+A Y  +     +  S  C 
Sbjct: 112 AGTECL-ISGWG--NTLSFGADYPDELKCLDAPVLTQAECKASYPGK-----ITNSMFCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q DSGGP++  G    Q+ G
Sbjct: 164 GFLEGGKDSC------------------------------QRDSGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA    PG+YT++  Y+ WI DT+
Sbjct: 190 VVSWGHGCAWKNRPGVYTKVYNYVDWIKDTI 220

>pdb|1AUT|C Chain C, Human Activated Protein C Length = 250

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 124/275 (45%), Gaps = 51/275 (18%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           ++ G     G+ PW +V L       CG  +IH  W++TAAHC+        + ++ V L
Sbjct: 1   LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMD------ESKKLLVRL 54
Query: 176 KEHDLSRPSI--STVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            E+DL R       + +  +  HP++S S+ +NDIALL L +    S  I P CLP   L
Sbjct: 55  GEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGL 114
Query: 234 DYSE-----QSVTVAGWGW--TNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN 286
              E     Q   V GWG+  + E  ++  R+ +L  + + VV +  C     SE     
Sbjct: 115 AERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNEC-----SEVMSNM 169
Query: 287 VKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG 346
           V E+ +CAG     +DAC                              + DSGGP++   
Sbjct: 170 VSENMLCAGILGDRQDAC------------------------------EGDSGGPMVASF 199
Query: 347 AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
             +  ++GLVS G GC      G+YT+++RY+ WI
Sbjct: 200 HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWI 234

>pdb|3F6U|H Chain H, Crystal Structure Of Human Activated Protein C (Apc) Complexed With Ppack Length = 240

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 124/275 (45%), Gaps = 51/275 (18%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           ++ G     G+ PW +V L       CG  +IH  W++TAAHC+        + ++ V L
Sbjct: 1   LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMD------ESKKLLVRL 54
Query: 176 KEHDLSRPSI--STVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            E+DL R       + +  +  HP++S S+ +NDIALL L +    S  I P CLP   L
Sbjct: 55  GEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGL 114
Query: 234 DYSE-----QSVTVAGWGW--TNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN 286
              E     Q   V GWG+  + E  ++  R+ +L  + + VV +  C     SE     
Sbjct: 115 AERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNEC-----SEVMSNM 169
Query: 287 VKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG 346
           V E+ +CAG     +DAC                              + DSGGP++   
Sbjct: 170 VSENMLCAGILGDRQDAC------------------------------EGDSGGPMVASF 199
Query: 347 AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
             +  ++GLVS G GC      G+YT+++RY+ WI
Sbjct: 200 HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWI 234

>pdb|2XW9|A Chain A, Crystal Structure Of Complement Factor D Mutant S183a Length = 228

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 124/275 (45%), Gaps = 54/275 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  A     P++ S++ +G H CGG ++ EQW+++AAHCL +     +  ++ V L 
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDA----ADGKVQVLLG 56
Query: 177 EHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H LS+P  S     VLR + HP     + ++D+ LL+L+        +RP  LP   +D
Sbjct: 57  AHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRP--LPWQRVD 114
Query: 235 YSEQSVT---VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                 T   VAGWG  N     GRR + LQ V L V+    C      +G    + E  
Sbjct: 115 RDVAPGTLCDVAGWGIVNH---AGRRPDSLQHVLLPVLDRATCNRRTHHDGA---ITERL 168
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           MCA  E   +D+C                              + D+GGPL+  G     
Sbjct: 169 MCA--ESNRRDSC------------------------------KGDAGGPLVCGGV---- 192
Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           + G+V++G   C   + PG+YTR+  Y  WI   L
Sbjct: 193 LEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227

>pdb|3PMJ|A Chain A, Bovine Trypsin Variant X(Tripleile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGIYTKVCNYVSWIKQTI 220

>pdb|3UNS|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGFYTKVCNYVSWIKQTI 220

>pdb|1V2N|T Chain T, Potent Factor Xa Inhibitor In Complex With Bovine Trypsin Variant X(99175190)BT Length = 223

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|3PWB|A Chain A, Bovine Trypsin Variant X(Tripleglu217ile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGEGCAQKNKPGIYTKVCNYVSWIKQTI 220

>pdb|1V2K|T Chain T, Factor Xa Specific Inhibitor In Complex With Bovine Trypsin Variant X(Triple.Glu)bt.D2 Length = 223

Iteration: 1
 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGEGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|2EEK|A Chain A, Crystal Structure Of Atlantic Cod Trypsin Complexed With Benzamidine Length = 220

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 126/274 (45%), Gaps = 60/274 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG           VSL   G HFCGG+++ + W+V+AAHC          S + V L 
Sbjct: 1   IVGGYECTKHSQAHQVSLNS-GYHFCGGSLVSKDWVVSAAHCY--------KSVLRVRLG 51
Query: 177 EHDL-----SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           EH +     +   IS+  V+R   HP++S  + NNDI L++LT+    +  +    LP+ 
Sbjct: 52  EHHIRVNEGTEQYISSSSVIR---HPNYSSYNINNDIMLIKLTKPATLNQYVHAVALPT- 107
Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                    TV+GWG T  + + G +   LQ ++L ++S+  C   Y        + +S 
Sbjct: 108 ECAADATMCTVSGWGNTMSSVADGDK---LQCLSLPILSHADCANSYPGM-----ITQSM 159
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
            CAG+ +GGKD+C                              Q DSGGP++  G     
Sbjct: 160 FCAGYLEGGKDSC------------------------------QGDSGGPVVCNGV---- 185
Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           + G+VS G GCA    PG+Y ++    GW+ DT+
Sbjct: 186 LQGVVSWGYGCAERDHPGVYAKVCVLSGWVRDTM 219

>pdb|2R9P|A Chain A, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin Inhibitor(Bpti) Length = 224

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I EQW+V+AAHC          ++I V L 
Sbjct: 1   IVGGYTCEENSLPYQVSLNS-GSHFCGGSLISEQWVVSAAHCY--------KTRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++     +   +   +I+ HP ++  + +NDI L++L+     +  +    LP+    
Sbjct: 52  EHNIKVLEGNEQFINAAKIIRHPKYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPA 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              + + ++GWG  N         + L+ +   V++   C+A Y  +     +  S  C 
Sbjct: 112 AGTECL-ISGWG--NTLSFGADYPDELKCLDAPVLTQAECKASYPGK-----ITNSMFCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q D+GGP++  G    Q+ G
Sbjct: 164 GFLEGGKDSC------------------------------QRDAGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA    PG+YT++  Y+ WI DT+
Sbjct: 190 VVSWGHGCAWKNRPGVYTKVYNYVDWIKDTI 220

>pdb|4B2C|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tpa) In Complex With Eglin C Length = 223

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q D+GGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDAGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGFYTKVCNYVSWIKQTI 220

>pdb|3PLK|A Chain A, Bovine Trypsin Variant X(Tripleile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++++ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLLNSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGIYTKVCNYVSWIKQTI 220

>pdb|2OLG|A Chain A, Crystal Structure Of The Serine Protease Domain Of Prophenoloxidase Activating Factor-I In A Zymogen Form Length = 278

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 59/292 (20%)
Query: 116 KIVGGLAANPGEFPWIVSL-KRHGGHF----CGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
           KI+ G    P EFPW   +  ++  +F    CGG++I+ ++IVTAAHC+      +  + 
Sbjct: 22  KILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVGAL 81
Query: 171 INVTLKE---------HDLSRPSISTVPV----LRIMFHPSHSCSSFN--NDIALLELTR 215
             V L E         +   R  +   P+       + HP +   S +  +DIAL+ L R
Sbjct: 82  NKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNR 141
Query: 216 SIQWSDLIRPACLPSGSLDYS-EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC 274
            +++++ IRP CLP  + +    Q +TV GWG T      G+ S I QK+A+ VV  + C
Sbjct: 142 QVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRT----ETGQYSTIKQKLAVPVVHAEQC 197
Query: 275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPL 334
              + + G  + V+ SQ+CAG E+  KD+C                              
Sbjct: 198 AKTFGAAG--VRVRSSQLCAGGEK-AKDSC------------------------------ 224
Query: 335 QADSGGPLMLLGAESTQVI-GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             DSGGPL+   A     + GLVS G  C     PG+YT++ +Y  WI   +
Sbjct: 225 GGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIEGNI 276

>pdb|4B1T|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala ( Ta) In Complex With Eglin C Length = 223

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q D+GGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDAGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|3UQV|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGFYTKVCNYVSWIKQTI 220

>pdb|4B2B|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tgpa) In Complex With Eglin C Length = 223

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q D+GGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDAGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG YT++  Y+ WI  T+
Sbjct: 191 VSWGEGCAQKNKPGFYTKVCNYVSWIKQTI 220

>pdb|1Q3X|A Chain A, Crystal Structure Of The Catalytic Region Of Human Masp-2 Length = 328

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 51/299 (17%)
Query: 97  SSPIAGVPCGRSLASRRTG-KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTA 155
           S P+    CG  L++R TG +I GG  A PG+FPW V +   GG    G ++++ W++TA
Sbjct: 68  SLPVCEPVCG--LSARTTGGRIYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTA 123
Query: 156 AHCLCNGPSPLSASQINV-TLKEHDLSRPSISTVPVLRIMFHPSHSCSS-FNNDIALLEL 213
           AH +       SA  I + TLK   LS P  +      +  H  ++  + F+NDIAL++L
Sbjct: 124 AHAVYEQKHDASALDIRMGTLKR--LS-PHYTQAWSEAVFIHEGYTHDAGFDNDIALIKL 180
Query: 214 TRSIQWSDLIRPACLP---SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS 270
              +  +  I P CLP   + S   ++   T +GWG T     +G  +  L  V + +V 
Sbjct: 181 NNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ----RGFLARNLMYVDIPIVD 236
Query: 271 NQVCQAWYQSEGK-KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVH 329
           +Q C A Y+     + +V  + +CAG E GGKD+C                         
Sbjct: 237 HQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC------------------------- 271
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
                + DSGG L+ L +E+ +  V G+VS G + C      G+YT++  YI WI + +
Sbjct: 272 -----RGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 325

>pdb|4DG4|A Chain A, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 224

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I EQW+V+AAHC          ++I V L 
Sbjct: 1   IVGGYTCEENSLPYQVSLNS-GYHFCGGSLISEQWVVSAAHCY--------KTRIQVRLG 51
Query: 177 EHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++     +   +   +I+ HP ++  + +NDI L++L+     +  +    LP+    
Sbjct: 52  EHNIKVLEGNEQFINAAKIIRHPKYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAPPA 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
              + + ++GWG  N         + L+ +   V++   C+A Y  +     +  S  C 
Sbjct: 112 AGTECL-ISGWG--NTLSFGADYPDELKCLDAPVLTQAECKASYPGK-----ITNSMFCV 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GGKD+C                              Q D+GGP++  G    Q+ G
Sbjct: 164 GFLEGGKDSC------------------------------QRDAGGPVVCNG----QLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA    PG+YT++  Y+ WI DT+
Sbjct: 190 VVSWGHGCAWKNRPGVYTKVYNYVDWIKDTI 220

>pdb|4D9Q|A Chain A, Inhibiting Alternative Pathway Complement Activation By Targeting The Exosite On Factor D Length = 228

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 54/275 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  A     P++ S++ +G H CGG ++ EQW+++AAHCL +     +  ++ V L 
Sbjct: 1   ILGGREAEAHARPYMASVQVNGEHLCGGVLVAEQWVLSAAHCLEDA----ADGKVQVLLG 56
Query: 177 EHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H LS+P  S     VLR + HP     + ++D+ LL+L+        +RP  LP   +D
Sbjct: 57  AHSLSQPEPSKRLYDVLRAVPHPDSRPDTIDHDLLLLQLSEKATLGPAVRP--LPWQRVD 114
Query: 235 YSEQSVT---VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
              +  T   VAGWG  +     GRR + LQ V L V+    C      +G    + +  
Sbjct: 115 RDVEPGTLCDVAGWGIVSH---AGRRPDRLQHVLLPVLDRATCNRRTHHDGA---ITQRM 168
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           MCA  E   +D+C                              + DSGGPL+  G     
Sbjct: 169 MCA--ESNRRDSC------------------------------KGDSGGPLVCGGV---- 192
Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           + G+V++G   C   + PG+YTR+  Y  WI   L
Sbjct: 193 LEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227

>pdb|4B2A|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tga) In Complex With Eglin C Length = 223

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q D+GGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDAGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGEGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1MH0|A Chain A, Crystal Structure Of The Anticoagulant Slow Form Of Thrombin Length = 287

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 23  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 82
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 83  NFTENDLLVRIGKHSRTRYEANIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 142
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 143 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 201
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 202 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 231
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 232 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 285

>pdb|3UWI|A Chain A, Bovine Trypsin Variant X(Tripleglu217phe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 120/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  C G
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCVG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG YT++  Y+ WI  T+
Sbjct: 191 VSWGEGCAQKNKPGFYTKVCNYVSWIKQTI 220

>pdb|1JWT|A Chain A, Crystal Structure Of Thrombin In Complex With A Novel Bicyclic Lactam Inhibitor Length = 305

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 29  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 88
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 89  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 148
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 149 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 207
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 208 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 237
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 238 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 291

>pdb|1MKW|K Chain K, The Co-Crystal Structure Of Unliganded Bovine Alpha- Thrombin And Prethrombin-2: Movement Of The Yppw Segment And Active Site Residues Upon Ligand Binding Length = 308

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 133/292 (45%), Gaps = 55/292 (18%)
Query: 115 GKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQ 170
           G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     +   
Sbjct: 48  GRIVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDD 107
Query: 171 INVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPA 226
           + V + +H  +R    +  + +L +I  HP ++   + + DIALL+L R I+ SD I P 
Sbjct: 108 LLVRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPV 167
Query: 227 CLP----SGSLDYSEQSVTVAGWGWTNENPSQG---RRSNILQKVALSVVSNQVCQAWYQ 279
           CLP    +  L ++     V GWG   E  +      + ++LQ V L +V   VC+A   
Sbjct: 168 CLPDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKA--- 224
Query: 280 SEGKKINVKESQMCAGHEQG-GK--DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
               +I + ++  CAG++ G GK  DAC                              + 
Sbjct: 225 --STRIRITDNMFCAGYKPGEGKRGDAC------------------------------EG 252
Query: 337 DSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 253 DSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 304

>pdb|1EOJ|A Chain A, Design Of P1' And P3' Residues Of Trivalent Thrombin Inhibitors And Their Crystal Structures Length = 289

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 25  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 84
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 85  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 144
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 145 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 203
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 204 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 233
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 234 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 287

>pdb|1HAG|E Chain E, The Isomorphous Structures Of Prethrombin2, Hirugen-And Ppack- Thrombin: Changes Accompanying Activation And Exosite Binding To Thrombin Length = 295

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 29  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 88
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 89  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 148
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 149 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 207
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 208 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 237
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 238 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 291

>pdb|1NM6|A Chain A, Thrombin In Complex With Selective Macrocyclic Inhibitor At 1.8a Length = 287

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 22  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 81
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 82  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 141
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 142 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 200
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 201 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 230
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 231 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 284

>pdb|2BDY|A Chain A, Thrombin In Complex With Inhibitor Length = 289

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 23  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 82
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 83  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 142
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 143 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 201
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 202 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 231
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 232 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 285

>pdb|1NU9|A Chain A, Staphylocoagulase-prethrombin-2 Complex Length = 291

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 25  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 84
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 85  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 144
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 145 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 203
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 204 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 233
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 234 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 287

>pdb|1D6W|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electrophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 287

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 23  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 82
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 83  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 142
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 143 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 201
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 202 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 231
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 232 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 285

>pdb|1D9I|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 288

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 23  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 82
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 83  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 142
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 143 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 201
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 202 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 231
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 232 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 285

>pdb|3ELA|H Chain H, Crystal Structure Of Active Site Inhibited Coagulation Factor Viia Mutant In Complex With Soluble Tissue Factor Length = 254

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 46/277 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG     GE PW V L  +G   CGGT+I+  W+V+AAHC        +   +   L 
Sbjct: 1   IVGGKDCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCF---DKIKNWRNLIAVLG 57
Query: 177 EHDLSRP--SISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EHDLS       +  V +++   ++   + N+DIALL L + +  +D + P CLP  +  
Sbjct: 58  EHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERT-- 115
Query: 235 YSEQSVT------VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
           +SE+++       V+GWG   +   +G  + +LQ + +  +  Q C    +  G   N+ 
Sbjct: 116 FSERTLAFVRFSLVSGWG---QLLDRGATALVLQVLNVPRLMTQDCLQQSRKVGDSPNIT 172
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           E   CAG+  G KD+C                              + DSGGP       
Sbjct: 173 EYMFCAGYSDGSKDSC------------------------------KGDSGGPHATHYRG 202
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +  + G+VS G GCA     G+YTR+++YI W+   +
Sbjct: 203 TWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLM 239

>pdb|1THP|B Chain B, Structure Of Human Alpha-Thrombin Y225p Mutant Bound To D-Phe-Pro-Arg- Chloromethylketone Length = 259

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R   PG YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKPGFYTHVFRLKKWIQKVID 255

>pdb|1ZJK|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-2 Length = 403

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 51/299 (17%)
Query: 97  SSPIAGVPCGRSLASRRTG-KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTA 155
           S P+    CG  L++R TG +I GG  A PG+FPW V +   GG    G ++++ W++TA
Sbjct: 143 SLPVCEPVCG--LSARTTGGQIYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTA 198
Query: 156 AHCLCNGPSPLSASQINV-TLKEHDLSRPSISTVPVLRIMFHPSHSCSS-FNNDIALLEL 213
           AH +       SA  I + TLK   LS P  +      +  H  ++  + F+NDIAL++L
Sbjct: 199 AHAVYEQKHDASALDIRMGTLKR--LS-PHYTQAWSEAVFIHEGYTHDAGFDNDIALIKL 255
Query: 214 TRSIQWSDLIRPACLP---SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS 270
              +  +  I P CLP   + S   ++   T +GWG T     +G  +  L  V + +V 
Sbjct: 256 NNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ----RGFLARNLMYVDIPIVD 311
Query: 271 NQVCQAWYQSEGK-KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVH 329
           +Q C A Y+     + +V  + +CAG E GGKD+C                         
Sbjct: 312 HQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC------------------------- 346
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
                + DSGG L+ L +E+ +  V G+VS G + C      G+YT++  YI WI + +
Sbjct: 347 -----RGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 400

>pdb|3V0X|A Chain A, Bovine Trypsin Variant X(Tripleglu217phe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 119/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++  ++NNDI L++L  +      +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSETYNNDIMLIKLKSAASLXSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  C G
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCVG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKDAC                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDAC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG YT++  Y+ WI  T+
Sbjct: 191 VSWGEGCAQKNKPGFYTKVCNYVSWIKQTI 220

>pdb|3NXP|A Chain A, Crystal Structure Of Human Prethrombin-1 Length = 424

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 158 LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 217
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 218 NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 277
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 278 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 336
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 337 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 366
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 367 -----EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 420

>pdb|1V2S|T Chain T, Benzamidine In Complex With Bovine Trypsin Variant X(Ssfi.Glu)bt.D1 Length = 223

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSFIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGEGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|3K65|B Chain B, Crystal Structure Of Prethombin-2FRAGMENT-2 Complex Length = 308

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 42  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 101
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 102 NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 161
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 162 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 220
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 221 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 250
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + D+GGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 251 -----EGDAGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 304

>pdb|3SQE|E Chain E, Crystal Structure Of Prethrombin-2 Mutant S195a In The Alternative Form Length = 290

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 57/299 (19%)
Query: 109 LASRRTGKIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--S 164
           L S   G+IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   
Sbjct: 24  LESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDK 83
Query: 165 PLSASQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWS 220
             + + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +S
Sbjct: 84  NFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 143
Query: 221 DLIRPACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQ 272
           D I P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   
Sbjct: 144 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERP 202
Query: 273 VCQAWYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVH 329
           VC+     +  +I + ++  CAG+  ++G + DAC                         
Sbjct: 203 VCK-----DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------- 232
Query: 330 WDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                + D+GGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 233 -----EGDAGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 286

>pdb|1V2O|T Chain T, Trypsin Inhibitor In Complex With Bovine Trypsin Variant X(Ssyi)bt.B4 Length = 223

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+               +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSS-----CKSASSYIITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|2TLD|E Chain E, Crystal Structure Of An Engineered Subtilisin Inhibitor Complexed With Bovine Trypsin Length = 220

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 54/270 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
            E  G D+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 LE--GGDSC------------------------------QGDSGGPVVCSG----KLQGI 188
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+ + PG+YT++  Y+ WI  T+
Sbjct: 189 VSWGSGCAKNK-PGVYTKVCNYVSWIKQTI 217

>pdb|1V2U|T Chain T, Benzamidine In Complex With Bovine Trypsin Varinat X(Ssai) Bt.D1 Length = 223

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++   +      +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSASSAI-----ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1V2J|T Chain T, Benzamidine In Complex With Bovine Trypsin Variant X(Ssri) Bt.C1 Length = 223

Iteration: 1
 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S     +  +S   +I +  +  CAG
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILS----DSSCKSASSRI-ITSNMFCAG 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
           + +GGKD+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 YLEGGKDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1TWX|B Chain B, Crystal Structure Of The Thrombin Mutant D221aD222K Length = 259

Iteration: 1
 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GCAR    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCARKGKYGFYTHVFRLKKWIQKVID 255

>pdb|1V2Q|T Chain T, Trypsin Inhibitor In Complex With Bovine Trypsin Variant X(Sswi)bt.B4 Length = 223

Iteration: 1
 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 122/271 (45%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNEN-PSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
             Q + ++GWG T  +  S       L+   LS  S +   +W         +  +  CA
Sbjct: 113 GTQCL-ISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSASSWI--------ITSNMFCA 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 190 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1TQ0|B Chain B, Crystal Structure Of The Potent Anticoagulant Thrombin Mutant W215aE217A IN FREE FORM Length = 257

Iteration: 1
 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSAGAGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|3EE0|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF HUMAN Thrombin (Space Group P2(1)2(1)2(1)) Length = 259

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSAGAGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|2BQ6|B Chain B, Crystal Structure Of Factor Xa In Complex With 21 Length = 249

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 55/279 (19%)
Query: 116 KIVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           +IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V 
Sbjct: 15  RIVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVR 68
Query: 175 LKEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP- 229
           + + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP 
Sbjct: 69  VGDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPE 126
Query: 230 ---SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN 286
              + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           
Sbjct: 127 RDWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFI 178
Query: 287 VKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG 346
           + ++  CAG++   +DAC                              Q DSGGP +   
Sbjct: 179 ITQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRF 208
Query: 347 AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 209 KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 247

>pdb|1Z8I|B Chain B, Crystal Structure Of The Thrombin Mutant G193a Bound To Ppack Length = 259

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              +AD
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EAD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1BTH|H Chain H, Structure Of Thrombin Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 259

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 136/292 (46%), Gaps = 59/292 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWG-----WTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
           P    + SL  +     V GWG     WT  N  +G+ S +LQ V L +V   VC+    
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTT-NVGKGQPS-VLQVVNLPIVERPVCK---- 174
Query: 280 SEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
            +  +I + ++  CAG+  ++G + DAC                              Q 
Sbjct: 175 -DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------QG 203
Query: 337 DSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 204 DSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1GVL|A Chain A, Human Prokallikrein 6 (Hk6) PROZYME PROPROTEASE M Proneurosin Length = 223

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 59/275 (21%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           K+V G   +    P+  +L   G   CGG +IH  W++TAAHC            + V L
Sbjct: 1   KLVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHC--------KKPNLQVFL 52
Query: 176 KEHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            +H+L     S     V+R + HP +  +S + DI LL L R  + S+LI+P  L     
Sbjct: 53  GKHNLRQQESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPL---ER 109
Query: 234 DYSEQSVT--VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
           D S Q+ +  + GWG T    + G   + +Q   + +VS + C+  Y  +     + ++ 
Sbjct: 110 DCSAQTTSCHILGWGKT----ADGDFPDTIQCAYIHLVSREECEHAYPGQ-----ITQNM 160
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG E+ GKD+C                              Q DSGGPL+        
Sbjct: 161 LCAGDEKYGKDSC------------------------------QGDSGGPLVC----GDH 186
Query: 352 VIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           + GLVS G I C     PG+YT + RY  WI  T+
Sbjct: 187 LRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 221

>pdb|1HJ9|A Chain A, Atomic Resolution Structures Of Trypsin Provide Insight Into Structural Radiation Damage Length = 223

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 121/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G    L    INV  
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVE 59
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                   S S V       HPS++ ++ NNDI L++L  +   +  +    LP+     
Sbjct: 60  GNEQFISASKSIV-------HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASA 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             Q + ++GWG  N   S     ++L+ +   ++S+  C++ Y  +     +  +  CA 
Sbjct: 113 GTQCL-ISGWG--NTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAY 164
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
             +G  D+C                              Q DSGGP++  G    ++ G+
Sbjct: 165 GLEGKGDSC------------------------------QGDSGGPVVCSG----KLQGI 190
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GC     PG+YT++  Y+ WI  T+
Sbjct: 191 VSWGSGCQAKNKPGVYTKVCNYVSWIKQTI 220

>pdb|1ID5|H Chain H, Crystal Structure Of Bovine Thrombin Complex With Protease Inhibitor Ecotin Length = 256

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 131/290 (45%), Gaps = 55/290 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     +   + 
Sbjct: 1   IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R    +  + +L +I  HP ++   + + DIALL+L R I+ SD I P CL
Sbjct: 61  VRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQG---RRSNILQKVALSVVSNQVCQAWYQSE 281
           P    +  L ++     V GWG   E  +      + ++LQ V L +V   VC+A     
Sbjct: 121 PDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKA----- 175
Query: 282 GKKINVKESQMCAGHEQG-GK--DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
             +I + ++  CAG++ G GK  DAC                              + DS
Sbjct: 176 STRIRITDNMFCAGYKPGEGKRGDAC------------------------------EGDS 205
Query: 339 GGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           GGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 206 GGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1BBR|K Chain K, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 259

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 131/290 (45%), Gaps = 55/290 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     +   + 
Sbjct: 1   IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R    +  + +L +I  HP ++   + + DIALL+L R I+ SD I P CL
Sbjct: 61  VRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQG---RRSNILQKVALSVVSNQVCQAWYQSE 281
           P    +  L ++     V GWG   E  +      + ++LQ V L +V   VC+A     
Sbjct: 121 PDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKA----- 175
Query: 282 GKKINVKESQMCAGHEQG-GK--DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
             +I + ++  CAG++ G GK  DAC                              + DS
Sbjct: 176 STRIRITDNMFCAGYKPGEGKRGDAC------------------------------EGDS 205
Query: 339 GGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           GGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 206 GGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1DAN|H Chain H, Complex Of Active Site Inhibited Human Blood Coagulation Factor Viia With Human Recombinant Soluble Tissue Factor Length = 254

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 50/279 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG     GE PW V L  +G   CGGT+I+  W+V+AAHC        +   +   L 
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCF---DKIKNWRNLIAVLG 57
Query: 177 EHDLSRP--SISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EHDLS       +  V +++   ++   + N+DIALL L + +  +D + P CLP  +  
Sbjct: 58  EHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERT-- 115
Query: 235 YSEQSVT------VAGWGWTNENPSQGRRSNILQKVALSV--VSNQVCQAWYQSEGKKIN 286
           +SE+++       V+GWG   +     R +  L+ + L+V  +  Q C    +  G   N
Sbjct: 116 FSERTLAFVRFSLVSGWGQLLD-----RGATALELMVLNVPRLMTQDCLQQSRKVGDSPN 170
Query: 287 VKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG 346
           + E   CAG+  G KD+C                              + DSGGP     
Sbjct: 171 ITEYMFCAGYSDGSKDSC------------------------------KGDSGGPHATHY 200
Query: 347 AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             +  + G+VS G GCA     G+YTR+++YI W+   +
Sbjct: 201 RGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLM 239

>pdb|1XKA|C Chain C, Factor Xa Complexed With A Synthetic Inhibitor Fx-2212a,(2s)-(3'- Amidino-3-Biphenylyl)-5-(4-Pyridylamino)pentanoic Acid Length = 235

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|3ENS|B Chain B, Crystal Structure Of Human Fxa In Complex With Methyl (2z)-3-[(3- Chloro-1h-indol-7-yl)amino]-2-cyano-3-{[(3s)-2-oxo-1-(2- oxo-2- Pyrrolidin-1-ylethyl)azepan-3-yl]amino}acrylate Length = 238

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|1EZQ|A Chain A, Crystal Structure Of Human Coagulation Factor Xa Complexed With Rpr128515 Length = 254

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|1C5M|D Chain D, Structural Basis For Selectivity Of A Small Molecule, S1- Binding, Sub-Micromolar Inhibitor Of Urokinase Type Plasminogen Activator Length = 255

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|1HCG|A Chain A, Structure Of Human Des(1-45) Factor Xa At 2.2 Angstroms Resolution Length = 241

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|1FXY|A Chain A, Coagulation Factor Xa-Trypsin Chimera Inhibited With D-Phe-Pro-Arg- Chloromethylketone Length = 228

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 125/274 (45%), Gaps = 55/274 (20%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PA LP+ 
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTA 112
Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                 + + ++GWG  N   S     + LQ +   V+S   C+A Y  +     +  + 
Sbjct: 113 PPATGTKCL-ISGWG--NTASSGADYPDELQCLDAPVLSQAKCEASYPGK-----ITSNM 164
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
            C G  +GGKD+C                              Q DSGGP++  G    Q
Sbjct: 165 FCVGFLEGGKDSC------------------------------QGDSGGPVVCNG----Q 190
Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           + G+VS G GCA+   PG+YT++  Y+ WI +T+
Sbjct: 191 LQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 224

>pdb|1FJS|A Chain A, Crystal Structure Of The Inhibitor Zk-807834 (Ci-1031) Complexed With Factor Xa Length = 234

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|3GIC|B Chain B, Structure Of Thrombin Mutant Delta(146-149e) In The Free Form Length = 250

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 58/287 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKK 284
           P    + SL  +     V GWG     PS      +LQ V L +V   VC+     +  +
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKGQPS------VLQVVNLPIVERPVCK-----DSTR 169
Query: 285 INVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
           I + ++  CAG+  ++G + DAC                              + DSGGP
Sbjct: 170 IRITDNMFCAGYKPDEGKRGDAC------------------------------EGDSGGP 199
Query: 342 LMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 200 FVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 246

>pdb|2BVR|H Chain H, Human Thrombin Complexed With Fragment-based Small Molecules Occupying The S1 Pocket Length = 252

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 56/287 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKK 284
           P    + SL  +     V GWG    N  +  + ++LQ V L +V   VC+     +  +
Sbjct: 121 PDRETAASLLQAGYKGRVTGWG----NLKEKGQPSVLQVVNLPIVERPVCK-----DSTR 171
Query: 285 INVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
           I + ++  CAG+  ++G + DAC                              + DSGGP
Sbjct: 172 IRITDNMFCAGYKPDEGKRGDAC------------------------------EGDSGGP 201
Query: 342 LMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 202 FVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 248

>pdb|1SFQ|B Chain B, Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack Length = 259

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYEANIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1MQ5|A Chain A, Crystal Structure Of 3-chloro-n-[4-chloro-2-[[(4-chlorophenyl) Amino]carbonyl]phenyl]-4-[(4-methyl-1- piperazinyl)methyl]-2- Thiophenecarboxamide Complexed With Human Factor Xa Length = 233

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|2A0Q|B Chain B, Structure Of Thrombin In 400 Mm Potassium Chloride Length = 257

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYEANIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1RD3|B Chain B, 2.5a Structure Of Anticoagulant Thrombin Variant E217k Length = 259

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGKGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1L2E|A Chain A, Human Kallikrein 6 (Hk6) Active Form With Benzamidine Inhibitor Length = 223

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 119/272 (43%), Gaps = 55/272 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +V G   +    P+  +L   G   CGG +IH  W++TAAHC            + V L 
Sbjct: 1   LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHC--------KKPNLQVFLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           +H+L +   S     V+R + HP +  +S + DI LL L R  + S+LI+P  L      
Sbjct: 53  KHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLER-DCS 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +  S  + GWG T    + G   + +Q   + +VS + C+  Y  +     + ++ +CA
Sbjct: 112 ANTTSCHILGWGKT----ADGDFPDTIQCAYIHLVSREECEHAYPGQ-----ITQNMLCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G E+ GKD+C                              Q DSGGPL+        + G
Sbjct: 163 GDEKYGKDSC------------------------------QGDSGGPLVC----GDHLRG 188
Query: 355 LVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           LVS G I C     PG+YT + RY  WI  T+
Sbjct: 189 LVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220

>pdb|1QUR|H Chain H, Human Alpha-Thrombin In Complex With Bivalent, Benzamidine-Based Synthetic Inhibitor Length = 257

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1H8I|H Chain H, X-Ray Crystal Structure Of Human Alpha-Thrombin With A Tripeptide Phosphonate Inhibitor Length = 253

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 55/287 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKK 284
           P    + SL  +     V GWG   E   Q    ++LQ V L +V   VC+     +  +
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWGQ---PSVLQVVNLPIVERPVCK-----DSTR 172
Query: 285 INVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
           I + ++  CAG+  ++G + DAC                              + DSGGP
Sbjct: 173 IRITDNMFCAGYKPDEGKRGDAC------------------------------EGDSGGP 202
Query: 342 LMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 203 FVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 249

>pdb|1FAX|A Chain A, Coagulation Factor Xa Inhibitor Complex Length = 254

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + + +      ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTAAEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|1GJ5|H Chain H, Selectivity At S1, H2o Displacement, Upa, Tpa, Ser190ALA190 PROTEASE, Structure-Based Drug Design Length = 258

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1ABI|H Chain H, Structure Of The Hirulog 3-Thrombin Complex And Nature Of The S' Subsites Of Substrates And Inhibitors Length = 259

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1H8D|H Chain H, X-Ray Structure Of The Human Alpha-Thrombin Complex With A Tripeptide Phosphonate Inhibitor Length = 260

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 56/287 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKK 284
           P    + SL  +     V GWG    N  +  + ++LQ V L +V   VC+     +  +
Sbjct: 121 PDRETAASLLQAGYKGRVTGWG----NLKETGQPSVLQVVNLPIVERPVCK-----DSTR 171
Query: 285 INVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
           I + ++  CAG+  ++G + DAC                              + DSGGP
Sbjct: 172 IRITDNMFCAGYKPDEGKRGDAC------------------------------EGDSGGP 201
Query: 342 LMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 202 FVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 248

>pdb|3JZ1|B Chain B, Crystal Structure Of Human Thrombin Mutant N143p In E:na+ Form Length = 259

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 59/292 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWG-----WTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
           P    + SL  +     V GWG     WT  N  +G+ S +LQ V L +V   VC+    
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGPLKETWT-ANVGKGQPS-VLQVVNLPIVERPVCK---- 174
Query: 280 SEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
            +  +I + ++  CAG+  ++G + DAC                              + 
Sbjct: 175 -DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EG 203
Query: 337 DSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 204 DSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|2THF|B Chain B, Structure Of Human Alpha-thrombin Y225f Mutant Bound To D-phe-pro-arg- Chloromethylketone Length = 259

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKFGFYTHVFRLKKWIQKVID 255

>pdb|1DM4|B Chain B, Ser195ala Mutant Of Human Thrombin Complexed With Fibrinopeptide A (7- 16) Length = 260

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 136/292 (46%), Gaps = 57/292 (19%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQI 171
           +IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + +
Sbjct: 1   RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 60
Query: 172 NVTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPAC 227
            V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P C
Sbjct: 61  LVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVC 120
Query: 228 LP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
           LP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+    
Sbjct: 121 LPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK---- 175
Query: 280 SEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
            +  +I + ++  CAG+  ++G + DAC                              + 
Sbjct: 176 -DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EG 204
Query: 337 DSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           D+GGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 DAGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 256

>pdb|1A5I|A Chain A, Catalytic Domain Of Vampire Bat (Desmodus Rotundus) Saliva Plasminogen Activator In Complex With Egr-Cmk (Glu-Gly-Arg Chloromethyl Ketone) Length = 265

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 127/285 (44%), Gaps = 49/285 (17%)
Query: 118 VGGLAANPGEFPWIVSL----KRHGGH--FCGGTIIHEQWIVTAAHCLCNGPSPLSASQI 171
            GGL  +    PW  ++    +R  G    CGG +I   W++TAAHC      P    Q+
Sbjct: 15  TGGLFTDITSHPWQAAIFAQNRRSSGERFLCGGILISSCWVLTAAHCFQESYLP---DQL 71
Query: 172 NVTLKEHDLSRP--SISTVPVLRIMFHPSHSCSSFNNDIALLELT----RSIQWSDLIRP 225
            V L      +P     T  V + + H      ++NNDIALL+L     +  Q SD +R 
Sbjct: 72  KVVLGRTYRVKPGEEEQTFKVKKYIVHKEFDDDTYNNDIALLQLKSDSPQCAQESDSVRA 131
Query: 226 ACLPSGSL---DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG 282
            CLP  +L   D++E  ++    G+     S    S  L++  + +  +  C   +    
Sbjct: 132 ICLPEANLQLPDWTECELS----GYGKHKSSSPFYSEQLKEGHVRLYPSSRCAPKFLFNK 187
Query: 283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL 342
               V  + +CAG  + G+                  +YP+    VH     Q DSGGPL
Sbjct: 188 ---TVTNNMLCAGDTRSGE------------------IYPN----VH--DACQGDSGGPL 220
Query: 343 MLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
           + +      ++G++S G+GC    +PG+YT++T Y+GWI D + +
Sbjct: 221 VCMNDNHMTLLGIISWGVGCGEKDVPGVYTKVTNYLGWIRDNMHL 265

>pdb|1FI8|A Chain A, Rat Granzyme B [n66q] Complexed To Ecotin [81-84 Iepd] Length = 228

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 58/276 (21%)
Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG  A P   P++  L+      G   CGG +I E +++TAAHC        S S+I 
Sbjct: 1   IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC--------SGSKIQ 52
Query: 173 VTLKEHDLSRPSI--STVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H++         +PV++I+ HP+++  + +NDI LL+L    + S  ++P  LP 
Sbjct: 53  VTLGAHNIKEQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPR 112
Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            ++      V  VAGWG        G+ S+ LQ+V L+V  +Q C+++ ++   K N   
Sbjct: 113 RNVKVKPGDVCYVAGWGKLG---PMGKYSDTLQEVELTVQEDQKCESYLKNYFDKAN--- 166
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
            ++CAG                 P + R                 + DSGGPL+     +
Sbjct: 167 -EICAG----------------DPKIKRAS--------------FRGDSGGPLVCKKVAA 195
Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
               G+VS G        P  +T+++ ++ WI  T+
Sbjct: 196 ----GIVSYGQNDG--STPRAFTKVSTFLSWIKKTM 225

>pdb|1Z8J|B Chain B, Crystal Structure Of The Thrombin Mutant G193p Bound To Ppack Length = 259

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EPD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1B7X|B Chain B, Structure Of Human Alpha-Thrombin Y225i Mutant Bound To D- Phe-Pro-Arg-Chloromethylketone Length = 259

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKIGFYTHVFRLKKWIQKVID 255

>pdb|4D8N|A Chain A, Human Kallikrein 6 Inhibitors With A Para-Amidobenzylanmine P1 Group Carry A High Binding Efficiency Length = 223

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 121/274 (44%), Gaps = 59/274 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +V G   +    P+  +L   G   CGG +IH  W++TAAHC            + V L 
Sbjct: 1   LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHC--------KKPNLQVFLG 52
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           +H+L     S     V+R + HP +  +S + DI LL L R  + S+LI+P  L     D
Sbjct: 53  KHNLGQQESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPL---ERD 109
Query: 235 YSEQSVT--VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            S Q+ +  + GWG T    + G   + +Q   + +VS + C+  Y  +     + ++ +
Sbjct: 110 CSAQTTSCHILGWGKT----ADGDFPDTIQCAYIHLVSREECEHAYPGQ-----ITQNML 160
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG E+ GKD+C                              Q DSGGPL+        +
Sbjct: 161 CAGDEKYGKDSC------------------------------QGDSGGPLVC----GDHL 186
Query: 353 IGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
            GLVS G I C     PG+YT + RY  WI  T+
Sbjct: 187 RGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220

>pdb|2GD4|H Chain H, Crystal Structure Of The Antithrombin-S195a Factor Xa-Pentasaccharide Complex Length = 241

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +GR+S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGRQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q D+GGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDAGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|1BRU|P Chain P, Structure Of Porcine Pancreatic Elastase Complexed With The Elastase Inhibitor Gr143783 Length = 241

Iteration: 1
 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 128/283 (45%), Gaps = 59/283 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A P  +PW VSL+        H CGGT++ + W++TAAHC+       S+    
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS------SSRTYR 54
Query: 173 VTLKEHDLS--RPSISTVPVLRIMFHPSHSCSSFN--NDIALLELTRSIQWSDLIRPACL 228
           V L  H LS   P    V V +++ H   + +  +  NDIALL+L   +  +D I+  CL
Sbjct: 55  VVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCL 114
Query: 229 P-SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ--AWYQSEGKKI 285
           P +G++  +     V GWG    N   G   +ILQ+  L VV    C    W+ S     
Sbjct: 115 PAAGTILPNNYVCYVTGWGRLQTN---GASPDILQQGQLLVVDYATCSKPGWWGST---- 167
Query: 286 NVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL 345
            VK + +CAG + G   +C                                DSGGPL   
Sbjct: 168 -VKTNMICAGGD-GIISSC------------------------------NGDSGGPLNCQ 195
Query: 346 GAEST-QVIGLVSTG--IGCARPRLPGLYTRLTRYIGWISDTL 385
           GA    QV G+VS G  +GC     P ++TR++ YI WI+  +
Sbjct: 196 GANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238

>pdb|1SGF|G Chain G, Crystal Structure Of 7s Ngf: A Complex Of Nerve Growth Factor With Four Binding Proteins (serine Proteinases) Length = 237

Iteration: 1
 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 64/283 (22%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        PW V++ R+  + CGG ++   W++TAAHC              V L 
Sbjct: 1   IVGGFKCEKNSQPWHVAVYRYTQYLCGGVLLDPNWVLTAAHCY--------DDNYKVWLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCS-----------SFNNDIALLELTRSIQWSDLI 223
           +++L +  PS     V + + HP  + S            ++ND+ LL L++    +D +
Sbjct: 53  KNNLFKDEPSAQHRFVSKAIPHPGFNMSLMRKHIRFLEYDYSNDLMLLRLSKPADITDTV 112
Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
           +P  LP+   +  +   T    GW +  P++ + ++ L  V L ++ N+ C   +  +  
Sbjct: 113 KPITLPT---EEPKLGSTCLASGWGSITPTKFQFTDDLYCVNLKLLPNEDCAKAHIEK-- 167
Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
              V ++ +CAG   GGKD C                              + DSGGPL+
Sbjct: 168 ---VTDAMLCAGEMDGGKDTC------------------------------KGDSGGPLI 194
Query: 344 LLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
             G     + G+ S G   C  P +PG+YT+L ++  WI DT+
Sbjct: 195 CDGV----LQGITSWGHTPCGEPDMPGVYTKLNKFTSWIKDTM 233

>pdb|3TVJ|B Chain B, Catalytic Fragment Of Masp-2 In Complex With Its Specific Inhibitor Developed By Directed Evolution On Sgci Scaffold Length = 242

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 131/278 (47%), Gaps = 48/278 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV-TL 175
           I GG  A PG+FPW V +   GG    G ++++ W++TAAH +       SA  I + TL
Sbjct: 1   IYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTL 58
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSS-FNNDIALLELTRSIQWSDLIRPACLP---SG 231
           K   LS P  +      +  H  ++  + F+NDIAL++L   +  +  I P CLP   + 
Sbjct: 59  KR--LS-PHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAE 115
Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK-KINVKES 290
           S   ++   T +GWG T     +G  +  L  V + +V +Q C A Y+     + +V  +
Sbjct: 116 SFMRTDDIGTASGWGLTQ----RGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTAN 171
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG E GGKD+C                              + DSGG L+ L +E+ 
Sbjct: 172 MLCAGLESGGKDSC------------------------------RGDSGGALVFLDSETE 201
Query: 351 Q--VIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           +  V G+VS G + C      G+YT++  YI WI + +
Sbjct: 202 RWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 239

>pdb|1JOU|B Chain B, Crystal Structure Of Native S195a Thrombin With An Unoccupied Active Site Length = 259

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           +GGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 AGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|2Y5F|A Chain A, Factor Xa - Cation Inhibitor Complex Length = 234

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +G +S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGEQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|1DX5|M Chain M, Crystal Structure Of The Thrombin-Thrombomodulin Complex Length = 259

Iteration: 1
 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 134/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P       + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFIENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|1MD8|A Chain A, Monomeric Structure Of The Active Catalytic Domain Of Complement Protease C1r Length = 329

Iteration: 1
 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 127/296 (42%), Gaps = 50/296 (16%)
Query: 99  PIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHC 158
           P+ G P       +R   I+GG  A  G FPW V    HG    GG ++ ++WI+TAAH 
Sbjct: 75  PVCGKPVNPVEQRQR---IIGGQKAKMGNFPWQVFTNIHGRG--GGALLGDRWILTAAHT 129
Query: 159 LC-NGPSPLSASQINVTLKEHDLSR-PSISTVPVLRIMFHPSH---SCSSFNNDIALLEL 213
           L        S + ++V L   ++     +   P+ R+  HP +      +F  DIALLEL
Sbjct: 130 LYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 189
Query: 214 TRSIQWSDLIRPACLPSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQ 272
             S+     + P CLP     Y    +  V+G+G   E     + ++ L+ V L V + Q
Sbjct: 190 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE-----KIAHDLRFVRLPVANPQ 244
Query: 273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDP 332
            C+ W + + +     ++  CAGH    +DAC                            
Sbjct: 245 ACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC---------------------------- 276
Query: 333 PLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
             Q DSGG   +    + +    G+VS GIGC+R    G YT++  Y+ WI   ++
Sbjct: 277 --QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGY--GFYTKVLNYVDWIKKEME 328

>pdb|4FXG|H Chain H, Complement C4 In Complex With Masp-2 Length = 242

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 131/278 (47%), Gaps = 48/278 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV-TL 175
           I GG  A PG+FPW V +   GG    G ++++ W++TAAH +       SA  I + TL
Sbjct: 1   IYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTL 58
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSS-FNNDIALLELTRSIQWSDLIRPACLP---SG 231
           K   LS P  +      +  H  ++  + F+NDIAL++L   +  +  I P CLP   + 
Sbjct: 59  KR--LS-PHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAE 115
Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK-KINVKES 290
           S   ++   T +GWG T     +G  +  L  V + +V +Q C A Y+     + +V  +
Sbjct: 116 SFMRTDDIGTASGWGLT----QRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTAN 171
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG E GGKD+C                              + D+GG L+ L +E+ 
Sbjct: 172 MLCAGLESGGKDSC------------------------------RGDAGGALVFLDSETE 201
Query: 351 Q--VIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           +  V G+VS G + C      G+YT++  YI WI + +
Sbjct: 202 RWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 239

>pdb|2BOK|A Chain A, Factor Xa- Cation Length = 241

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 55/278 (19%)
Query: 117 IVGGLAANPGEFPW-IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW  + +      FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-- 229
            + +  +     ++  V V  ++ H   +  +++ DIA+L L   I +   + PACLP  
Sbjct: 55  GDRNTEQEEGGEAVHEVEV--VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 230 --SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
             + S   ++++  V+G+G T+E   +G +S  L+ + +  V    C+           +
Sbjct: 113 DWAESTLMTQKTGIVSGFGRTHE---KGEQSTRLKMLEVPYVDRNSCKL-----SSSFII 164
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            ++  CAG++   +DAC                              Q DSGGP +    
Sbjct: 165 TQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFK 194
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           ++  V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 195 DTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>pdb|3EDX|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF MURINE THROMBIN Length = 258

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 130/293 (44%), Gaps = 61/293 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHC+   P     + + + 
Sbjct: 1   IVEGWDAEKGIAPWQVMLFRKSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   ++  + +L +I  HP ++   + + DIALL+L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNVEKISMLEKIYVHPRYNWRENLDRDIALLKLKKPVPFSDYIHPVCL 120
Query: 229 PSG----SLDYSEQSVTVAGWG-----W-TNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
           P      SL  +     V GWG     W TN N  Q    ++LQ V L +V   VC+A  
Sbjct: 121 PDKQTVTSLLRAGYKGRVTGWGNLRETWTTNINEIQ---PSVLQVVNLPIVERPVCKA-- 175
Query: 279 QSEGKKINVKESQMCAGHEQGGK---DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ 335
                +I + ++  CAG +       DAC                              +
Sbjct: 176 ---STRIRITDNMFCAGFKVNDTKRGDAC------------------------------E 202
Query: 336 ADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 203 GDSGGPFVMKSPFNNRWYQMGIVSAGAGCDRKGKYGFYTHVFRLKRWIQKVID 255

>pdb|1VZQ|H Chain H, Complex Of Thrombin With Designed Inhibitor 7165 Length = 250

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 56/287 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P   + ++ ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 175 LKEHDLSRPS----ISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           ++    SR +    I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTAYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKK 284
           P    + SL  +     V GWG    N  +  + ++LQ V L +V   VC+     +  +
Sbjct: 121 PDRETAASLLQAGYKGRVTGWG----NLKETGQPSVLQVVNLPIVERPVCK-----DSTR 171
Query: 285 INVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
           I + ++  CAG+  ++G + DAC                              + DSGGP
Sbjct: 172 IRITDNMFCAGYKPDEGKRGDAC------------------------------EGDSGGP 201
Query: 342 LMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 202 FVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 248

>pdb|2GP9|B Chain B, Crystal Structure Of The Slow Form Of Thrombin In A Self- Inhibited Conformation Length = 259

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 135/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + +IAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRNIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|2OD3|B Chain B, Human Thrombin Chimera With Human Residues 184a, 186, 186a, 186b, 186c And 222 Replaced By Murine Thrombin Equivalents Length = 259

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGHEQGGK---DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG +       DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGFKVNDTKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCDRKGKYGFYTHVFRLKKWIQKVID 255

>pdb|1EUF|A Chain A, Bovine Duodenase(New Serine Protease), Crystal Structure Length = 227

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 124/276 (44%), Gaps = 60/276 (21%)
Query: 117 IVGGLAANPGEFPWIVSL--KRHG-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  A P   P++  L  K  G  H CGG ++ E +++TAAHCL         S INV
Sbjct: 1   IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCL--------GSSINV 52
Query: 174 TLKEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           TL  H++     +   +PV R + HP ++  +  NDI LL+LTR    +D + P  LP  
Sbjct: 53  TLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRS 112
Query: 232 SLDYSEQSV-TVAGWGWTNEN-PSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
             +     + +VAGWG    N PS  +    LQ+V L V S + C A +++      +  
Sbjct: 113 LAEVKPGMMCSVAGWGRLGVNMPSTDK----LQEVDLEVQSEEKCIARFKNY-----IPF 163
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           +Q+CAG                          PS R           DSGGPL+  G   
Sbjct: 164 TQICAGD-------------------------PSKRKN-----SFSGDSGGPLVCNGVAQ 193
Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
               G+VS G        P +YTR++ ++ WI  T+
Sbjct: 194 ----GIVSYGRNDG--TTPDVYTRISSFLSWIHSTM 223

>pdb|2OCV|B Chain B, Structural Basis Of Na+ Activation Mimicry In Murine Thrombin Length = 259

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 130/293 (44%), Gaps = 61/293 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHC+   P     + + + 
Sbjct: 1   IVEGWDAEKGIAPWQVMLFRKSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   ++  + +L +I  HP ++   + + DIALL+L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNVEKISMLEKIYVHPRYNWRENLDRDIALLKLKKPVPFSDYIHPVCL 120
Query: 229 PSG----SLDYSEQSVTVAGWG-----W-TNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
           P      SL  +     V GWG     W TN N  Q    ++LQ V L +V   VC+A  
Sbjct: 121 PDKQTVTSLLRAGYKGRVTGWGNLRETWTTNINEIQ---PSVLQVVNLPIVERPVCKA-- 175
Query: 279 QSEGKKINVKESQMCAGHEQGGK---DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ 335
                +I + ++  CAG +       DAC                              +
Sbjct: 176 ---STRIRITDNMFCAGFKVNDTKRGDAC------------------------------E 202
Query: 336 ADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 203 GDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRKGKYGFYTHVFRLKAWIQKVID 255

>pdb|1MD7|A Chain A, Monomeric Structure Of The Zymogen Of Complement Protease C1r Length = 328

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 50/296 (16%)
Query: 99  PIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHC 158
           P+ G P       +R   I+GG  A  G FPW V    HG    GG ++ ++WI+TAAH 
Sbjct: 75  PVCGKPVNPVEQRQR---IIGGQKAKMGNFPWQVFTNIHGRG--GGALLGDRWILTAAHT 129
Query: 159 LC-NGPSPLSASQINVTLKEHDLSR-PSISTVPVLRIMFHPSH---SCSSFNNDIALLEL 213
           L        S + ++V L   ++     +   P+ R+  HP +      +F  DIALLEL
Sbjct: 130 LYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 189
Query: 214 TRSIQWSDLIRPACLPSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQ 272
             S+     + P CLP     Y    +  V+G+G   E     + ++ L+ V L V + Q
Sbjct: 190 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE-----KIAHDLRFVRLPVANPQ 244
Query: 273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDP 332
            C+ W + + +     ++  CAGH    +DAC                            
Sbjct: 245 ACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC---------------------------- 276
Query: 333 PLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
             Q D+GG   +    + +    G+VS GIGC+R    G YT++  Y+ WI   ++
Sbjct: 277 --QGDAGGVFAVRDPNTDRWVATGIVSWGIGCSRGY--GFYTKVLNYVDWIKKEME 328

>pdb|2ASU|B Chain B, Crystal Structure Of The Beta-Chain Of HgflMSP Length = 234

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 120/275 (43%), Gaps = 52/275 (18%)
Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQI--NV 173
           +VGG   +PG  PW VSL+ R G HFCGG+++ EQWI+TA  C  +   PL+  ++    
Sbjct: 1   VVGG---HPGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGT 57
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG-S 232
             +      PS+  VPV +++  PS S       + LL+L RS+  +  +   CLP    
Sbjct: 58  LFQNPQHGEPSLQRVPVAKMVCGPSGS------QLVLLKLERSVTLNQRVALICLPPEWY 111
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
           +        +AGWG T    +      +L    L+V+SNQ C   ++       V+ES+M
Sbjct: 112 VVPPGTKCEIAGWGETKGTGN----DTVLNVALLNVISNQECNIKHRGR-----VRESEM 162
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           C         AC                              + D GGPL      S  +
Sbjct: 163 CTEGLLAPVGAC------------------------------EGDYGGPLACFTHNSWVL 192
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
            G++     CAR R P ++TR++ ++ WI   + +
Sbjct: 193 EGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVMRL 227

>pdb|2QY0|B Chain B, Active Dimeric Structure Of The Catalytic Domain Of C1r Reveals Enzyme-product Like Contacts Length = 242

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 47/278 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLC-NGPSPLSASQINVTL 175
           I+GG  A  G FPW V    HG    GG ++ ++WI+TAAH L        S + ++V L
Sbjct: 1   IIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58
Query: 176 KEHDLSR-PSISTVPVLRIMFHPSH---SCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
              ++     +   P+ R+  HP +      +F  DIALLEL  S+     + P CLP  
Sbjct: 59  GHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDN 118
Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
              Y    +  V+G+G   E     + ++ L+ V L V + Q C+ W + + +     ++
Sbjct: 119 DTFYDLGLMGYVSGFGVMEE-----KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQN 173
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAGH    +DAC                              Q DSGG   +    + 
Sbjct: 174 MFCAGHPSLKQDAC------------------------------QGDSGGVFAVRDPNTD 203
Query: 351 Q--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           +    G+VS GIGC+R    G YT++  Y+ WI   ++
Sbjct: 204 RWVATGIVSWGIGCSRGY--GFYTKVLNYVDWIKKEME 239

>pdb|1GPZ|A Chain A, The Crystal Structure Of The Zymogen Catalytic Domain Of Complement Protease C1r Length = 399

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 50/296 (16%)
Query: 99  PIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHC 158
           P+ G P        +  +I+GG  A  G FPW V    HG    GG ++ ++WI+TAAH 
Sbjct: 143 PVCGKPVN---PVEQRQQIIGGQKAKMGNFPWQVFTNIHGRG--GGALLGDRWILTAAHT 197
Query: 159 LC-NGPSPLSASQINVTLKEHDLSR-PSISTVPVLRIMFHPSH---SCSSFNNDIALLEL 213
           L        S + ++V L   ++     +   P+ R+  HP +      +F  DIALLEL
Sbjct: 198 LYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 257
Query: 214 TRSIQWSDLIRPACLPSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQ 272
             S+     + P CLP     Y    +  V+G+G   E     + ++ L+ V L V + Q
Sbjct: 258 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE-----KIAHDLRFVRLPVANPQ 312
Query: 273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDP 332
            C+ W + + +     ++  CAGH    +DAC                            
Sbjct: 313 ACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC---------------------------- 344
Query: 333 PLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
             Q DSGG   +    + +    G+VS GIGC+R    G YT++  Y+ WI   ++
Sbjct: 345 --QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGY--GFYTKVLNYVDWIKKEME 396

>pdb|1WBG|B Chain B, Active Site Thrombin Inhibitors Length = 259

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 134/291 (46%), Gaps = 57/291 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           +  +I + ++  CAG+  ++G + DAC                              + D
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGKRGDAC------------------------------EGD 204
Query: 338 SGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           SGGP ++    + +   +G+VS G GC      G YT + R   WI   +D
Sbjct: 205 SGGPFVMKSPFNNRWYQMGIVSWGEGCRDDGKYGFYTHVFRLKKWIQKVID 255

>pdb|3I77|A Chain A, 3599170-Loops Of Fxa In Sgt Length = 230

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 119/269 (44%), Gaps = 48/269 (17%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           +VGG  A  GEFP++V L       FCGG +  +  ++TAAHC+    +  S   I  T 
Sbjct: 1   VVGGTRAAQGEFPFMVRLINEENEGFCGGALYAQDIVLTAAHCVSGSGNNTS---ITATG 57
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
              DL   S   V   +++  P  +  ++  D AL++L + I      +P    + +  Y
Sbjct: 58  GVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPIN-----QPTLKIATTTAY 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
           ++ + TVAGWG   E  SQ R    L K  +  VS+  C    +S    I V    +CAG
Sbjct: 113 NQGTFTVAGWGANREGGSQQR---YLLKANVPFVSDAAC----RSSSSFILVANEMICAG 165
Query: 296 H-EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-GAESTQVI 353
           + + GG D C                              Q DSGGP+     A+    +
Sbjct: 166 YPDTGGVDTC------------------------------QGDSGGPMFRKDNADEWIQV 195
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
           G+VS G GCARP  PG+YT ++ +   I+
Sbjct: 196 GIVSWGYGCARPGYPGVYTEVSTFASAIA 224

>pdb|1KIG|H Chain H, Bovine Factor Xa Length = 241

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 59/280 (21%)
Query: 117 IVGGLAANPGEFPW---IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG     GE PW   +V+ +  G  FCGGTI++E +++TAAHCL        A +  V
Sbjct: 1   IVGGRDCAEGECPWQALLVNEENEG--FCGGTILNEFYVLTAAHCL------HQAKRFTV 52
Query: 174 TLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
            + + +  +   + +   V   + H      +++ DIA+L L   I++   + PACLP  
Sbjct: 53  RVGDRNTEQEEGNEMAHEVEMTVKHSRFVKETYDFDIAVLRLKTPIRFRRNVAPACLPEK 112
Query: 232 SLDYSEQSVT------VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKI 285
             D++E ++       V+G+G T+E   +GR S+ L+ + +  V    C+          
Sbjct: 113 --DWAEATLMTQKTGIVSGFGRTHE---KGRLSSTLKMLEVPYVDRSTCKL-----SSSF 162
Query: 286 NVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL 345
            +  +  CAG++   +DAC                              Q DSGGP +  
Sbjct: 163 TITPNMFCAGYDTQPEDAC------------------------------QGDSGGPHVTR 192
Query: 346 GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             ++  V G+VS G GCAR    G+YT+++ ++ WI   +
Sbjct: 193 FKDTYFVTGIVSWGEGCARKGKFGVYTKVSNFLKWIDKIM 232

>pdb|1MZA|A Chain A, Crystal Structure Of Human Pro-Granzyme K Length = 240

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 123/276 (44%), Gaps = 49/276 (17%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHC---LCNGPSPLSASQIN 172
           +I+GG   +P   P++ S++  G H CGG +I  QW++TAAHC      G SP       
Sbjct: 2   EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSP------T 55
Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACLPS 230
           V L  H LS+   S   +    F P    +S   +NDI L++L  + + +  ++   + S
Sbjct: 56  VVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRS 115
Query: 231 GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
            +   S     V GWG T  +P   R S+ L++V ++V+S ++C +     G     K+ 
Sbjct: 116 KTSLRSGTKCKVTGWGAT--DPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKD- 172
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG  +G KD+C                              + D+GGPL+  G    
Sbjct: 173 MVCAGDAKGQKDSC------------------------------KGDAGGPLICKGV--- 199
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLT-RYIGWISDTL 385
               +VS G  C     PG+YT LT +Y  WI   L
Sbjct: 200 -FHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234

>pdb|2PUX|B Chain B, Crystal Structure Of Murine Thrombin In Complex With The Extracellular Fragment Of Murine Par3 Length = 258

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 130/293 (44%), Gaps = 61/293 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHC+   P     + + + 
Sbjct: 1   IVEGWDAEKGIAPWQVMLFRKSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   ++  + +L +I  HP ++   + + DIALL+L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNVEKISMLEKIYVHPRYNWRENLDRDIALLKLKKPVPFSDYIHPVCL 120
Query: 229 PSG----SLDYSEQSVTVAGWG-----W-TNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
           P      SL  +     V GWG     W TN N  Q    ++LQ V L +V   VC+A  
Sbjct: 121 PDKQTVTSLLRAGYKGRVTGWGNLRETWTTNINEIQ---PSVLQVVNLPIVERPVCKA-- 175
Query: 279 QSEGKKINVKESQMCAGHEQGGK---DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ 335
                +I + ++  CAG +       DAC                              +
Sbjct: 176 ---STRIRITDNMFCAGFKVNDTKRGDAC------------------------------E 202
Query: 336 ADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            D+GGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 203 GDAGGPFVMKSPFNNRWYQMGIVSWGEGCDRKGKYGFYTHVFRLKRWIQKVID 255

>pdb|1AO5|A Chain A, Mouse Glandular Kallikrein-13 (Prorenin Converting Enzyme) Length = 237

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 64/283 (22%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG        PW V++     H CGG ++   W++TAAHC  +        Q  V L 
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYVD--------QYEVWLG 52
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCS-----------SFNNDIALLELTRSIQWSDLI 223
           ++ L    PS     V +   HP  + S            F++D+ LL L++    +D++
Sbjct: 53  KNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVV 112
Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
           +P  LP+       + +     GW +  P++ ++ + LQ V ++++ N+ C   Y  +  
Sbjct: 113 KPIALPTKEPKPGSKCLAS---GWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQK-- 167
Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
              V +  +CAG   GGKD C                              + DSGGPL+
Sbjct: 168 ---VTDVMLCAGEMGGGKDTC------------------------------RDDSGGPLI 194
Query: 344 LLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
             G     + G  S G + C +P +P +YT L ++  WI DT+
Sbjct: 195 CDGI----LQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTM 233

>pdb|1VR1|H Chain H, Specifity For Plasminogen Activator Inhibitor-1 Length = 261

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 61/295 (20%)
Query: 117 IVGGLAANPGEFPWIVSL----KRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSA 168
           IV G  A  G  PW V L    +R  G    CG ++I ++W++TAAHCL   P     + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFAKHRRSPGERFLCGASLISDRWVLTAAHCLLYPPWDKNFTE 60
Query: 169 SQINVTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIR 224
           + + V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I 
Sbjct: 61  NDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIH 120
Query: 225 PACLP----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQA 276
           P CLP    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+ 
Sbjct: 121 PVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK- 178
Query: 277 WYQSEGKKINVKESQMCAGH--EQGGK-DACWVSRQWWTPHVARGRVYPSHRSGVHWDPP 333
               +  +I + ++  CA +  ++G + DAC                             
Sbjct: 179 ----DSTRIRITDNMFCAYYKPDEGKRGDAC----------------------------- 205
Query: 334 LQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
            + DSGGP ++    + +   +G+VS G GC R    G YT + R   WI   +D
Sbjct: 206 -EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 259

>pdb|2B9L|A Chain A, Crystal Structure Of Prophenoloxidase Activating Factor-Ii From The Beetle Holotrichia Diomphalia Length = 394

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 129/303 (42%), Gaps = 54/303 (17%)
Query: 100 IAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKR--------HGGHFCGGTIIHEQW 151
             G+   R L  + TG+      A  GEFPW+V++ +             CGG++I    
Sbjct: 117 FCGIRNERGLDFKITGQTN---EAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSV 173
Query: 152 IVTAAHCLCNGPSPLSASQINV----TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNND 207
           ++T AHC+ +  S L A +I      TL E +  R       + +++ H + +  +  ND
Sbjct: 174 VLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKE--RLPYQERKIRQVIIHSNFNPKTVVND 231
Query: 208 IALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALS 267
           +ALL L R +  +D I   CLP  S  +       +GWG   E  S+ R SNIL+K+ L 
Sbjct: 232 VALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWG-KKEFGSRHRYSNILKKIQLP 290
Query: 268 VVSNQVCQAWYQSE--GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHR 325
            V    CQA  ++   G K  + ++ +CAG EQ GKD C                     
Sbjct: 291 TVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQ-GKDTC--------------------- 328
Query: 326 SGVHWDPPLQADSGGPLMLLGAES---TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
                      D G PL      +      +G+V+ GIGC    +PG+Y  +  +  WI 
Sbjct: 329 ---------TGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWID 379
Query: 383 DTL 385
             +
Sbjct: 380 QEM 382

>pdb|1M9U|A Chain A, Crystal Structure Of Earthworm Fibrinolytic Enzyme Component A From Eisenia Fetida Length = 241

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 44/275 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           ++GG  A+PGEFPW +S +R  G   H CG +++     ++A+HC+ +G  P +   I  
Sbjct: 1   VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCV-DGVLPNNIRVIAG 59
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GS 232
             ++ D S    + V    +  +     +S++NDIA+L L  SI     I+ A LP+  +
Sbjct: 60  LWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNN 119
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            DY+  +  ++GWG T+         +ILQK ++ V++   C A     G   N+ ++ +
Sbjct: 120 NDYAGTTCVISGWGRTD---GTNNLPDILQKSSIPVITTAQCTAAMVGVGGA-NIWDNHI 175
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           C     G   AC                                DSGGPL       T+V
Sbjct: 176 CVQDPAGNTGAC------------------------------NGDSGGPLNCPDG-GTRV 204
Query: 353 IG----LVSTGIGCARPRLPGLYTRLTRYIGWISD 383
           +G    +VS+G+G   P  P +YTR++ Y+GWI D
Sbjct: 205 VGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239

>pdb|2PGB|B Chain B, Inhibitor-Free Human Thrombin Mutant C191a-C220a Length = 259

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 132/289 (45%), Gaps = 53/289 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNE----NPSQGRRSNILQKVALSVVSNQVCQAWYQS 280
           P    + SL  +     V GWG   E    N  +G+ S +LQ V L +V   VC+     
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS-VLQVVNLPIVERPVCK----- 174
Query: 281 EGKKINVKESQMCAGHE-QGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
           +  +I + ++  CAG++   GK               RG                + DSG
Sbjct: 175 DSTRIRITDNMFCAGYKPDEGK---------------RGDA-------------AEGDSG 206
Query: 340 GPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           GP ++    + +   +G+VS G G  R    G YT + R   WI   +D
Sbjct: 207 GPFVMKSPFNNRWYQMGIVSWGEGADRDGKYGFYTHVFRLKKWIQKVID 255

>pdb|4GAW|A Chain A, Crystal Structure Of Active Human Granzyme H Length = 226

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 58/276 (21%)
Query: 117 IVGGLAANPGEFPWIVS---LKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  A P   P++     L+      CGG ++ + +++TAAHC          S INV
Sbjct: 1   IIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVLTAAHC--------QGSSINV 52
Query: 174 TLKEHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           TL  H++     +   +PV R + HP+++  +F+NDI LL+L R  +W+  +RP  LPS 
Sbjct: 53  TLGAHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKWTTAVRPLRLPSS 112
Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                  Q  +VAGWG+     S    +  LQ+V L+V  +  C+  +         + +
Sbjct: 113 KAQVKPGQLCSVAGWGYV----SMSTLATTLQEVLLTVQKDCQCERLFHGN----YSRAT 164
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           ++C G  +  +                                 + DSGGPL+       
Sbjct: 165 EICVGDPKKTQTG------------------------------FKGDSGGPLVCKDVAQ- 193
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
              G++S G     P  PG+Y +++ ++ WI  T+ 
Sbjct: 194 ---GILSYGNKKGTP--PGVYIKVSHFLPWIKRTMK 224

>pdb|1PYT|C Chain C, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 253

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 137/289 (47%), Gaps = 58/289 (20%)
Query: 111 SRRTGKIVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPL 166
           SR + ++V G  A P  + W VSL+        H CGG++I   W+VTA HC+       
Sbjct: 6   SRPSSRVVNGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS------ 59
Query: 167 SASQINVTLKEHDLS--RPSISTVPVL--RIMFHP--SHSCSSFNNDIALLELTRSIQWS 220
           ++    V L E+D S  + S   +P+    +  HP  + +C +  NDIAL++L+RS Q  
Sbjct: 60  TSRTYQVVLGEYDRSVLQGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLG 119
Query: 221 DLIRPACL-PSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
           D ++ A L P+G +  +E    ++GWG      + G   + LQ+  L VV  + C    Q
Sbjct: 120 DKVQLANLPPAGDILPNEAPCYISGWG---RLYTGGPLPDKLQEALLPVVDYEHCS---Q 173
Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
            +   I VK++ +CAG +                           RSG         DSG
Sbjct: 174 YDWWGITVKKTMVCAGGDT--------------------------RSGC------DGDSG 201
Query: 340 GPLMLLGAEST-QVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
           GPL    A+ + QV G+ S  +  GC   + P ++TR++ +I WI++T+
Sbjct: 202 GPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWINETI 250

>pdb|2ZGC|A Chain A, Crystal Structure Of Active Human Granzyme M Length = 240

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 11/161 (6%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG    P   P++ SL+R+G H CGG ++H +W++TAAHCL         +Q+ + L 
Sbjct: 1   IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQ-----RMAQLRLVLG 55
Query: 177 EHDLSRPSISTVPVLRIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACLPSG-SLD 234
            H L  P + T  +   + HP +    +  ND+ALL+L   ++ S  IRP  LPS   + 
Sbjct: 56  LHTLDSPGL-TFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVV 114
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ 275
            +    ++AGWG T++    GR S +L+++ L V+  ++C 
Sbjct: 115 AAGTRCSMAGWGLTHQG---GRLSRVLRELDLQVLDTRMCN 152

>pdb|2QXG|A Chain A, Crystal Structure Of Human Kallikrein 7 In Complex With Ala- Ala-phe-chloromethylketone Length = 224

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 51/273 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+ G     G  PW V+L       CGG +++E+W++TAAHC  N        +  V L 
Sbjct: 1   IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKMN--------EYTVHLG 52
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
              L       +   +   HP +S  +  ND+ L++L    + S +++   LPS   +  
Sbjct: 53  SDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPS-RCEPP 111
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
             + TV+GWG T  +P     S+++  V + ++S Q C   Y+       ++ S +CAG 
Sbjct: 112 GTTCTVSGWG-TTTSPDVTFPSDLMC-VDVKLISPQDCTKVYKDL-----LENSMLCAGI 164
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
               K+AC                                DSGGPL+  G     + GLV
Sbjct: 165 PDSKKNAC------------------------------NGDSGGPLVCRGT----LQGLV 190
Query: 357 STG-IGCARPRLPGLYTRLTRYIGWISDTLDIH 388
           S G   C +P  PG+YT++ ++  WI+DT+  H
Sbjct: 191 SWGTFPCGQPNDPGVYTQVCKFTKWINDTMKKH 223

>pdb|1EQ9|A Chain A, Crystal Structure Of Fire Ant Chymotrypsin Complexed To Pmsf Length = 222

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 49/269 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A  G++P+ VSL+  G H CG +I+    ++TAAHC+ +G S L+  +++V   
Sbjct: 1   IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCV-DGLSNLNRLKVHVGT- 58
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             +    S     V   + + ++      ND+AL+ LT  I+++DL++P  L +   D  
Sbjct: 59  --NYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLE 116
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
               T+ GWG T      G   N LQ++ L V   + C      E  +  V +S +C   
Sbjct: 117 SNPCTLTGWGSTRLG---GNTPNALQEIELIVHPQKQC------ERDQWRVIDSHICTLT 167
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
           ++ G+ AC                                DSGGPL+  GA+    IG+V
Sbjct: 168 KR-GEGAC------------------------------HGDSGGPLVANGAQ----IGIV 192
Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G  CA    P +YTR++ ++ WI+  L
Sbjct: 193 SFGSPCALGE-PDVYTRVSSFVSWINANL 220

>pdb|3TJU|A Chain A, Crystal Structure Of Human Granzyme H With An Inhibitor Length = 226

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 58/276 (21%)
Query: 117 IVGGLAANPGEFPWIVS---LKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  A P   P++     L+      CGG ++ + +++TAAHC          S INV
Sbjct: 1   IIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVLTAAHC--------QGSSINV 52
Query: 174 TLKEHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           TL  H++     +   +PV R + HP+++  +F+N+I LL+L R  +W+  +RP  LPS 
Sbjct: 53  TLGAHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNNIMLLQLERKAKWTTAVRPLRLPSS 112
Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                  Q  +VAGWG+     S    +  LQ+V L+V  +  C+  +         + +
Sbjct: 113 KAQVKPGQLCSVAGWGYV----SMSTLATTLQEVLLTVQKDCQCERLFHGN----YSRAT 164
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           ++C G  +  +                                 + DSGGPL+       
Sbjct: 165 EICVGDPKKTQTG------------------------------FKGDSGGPLVCKDVAQ- 193
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
              G++S G     P  PG+Y +++ ++ WI  T+ 
Sbjct: 194 ---GILSYGNKKGTP--PGVYIKVSHFLPWIKRTMK 224

>pdb|1FQ3|A Chain A, Crystal Structure Of Human Granzyme B Length = 227

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 67/280 (23%)
Query: 117 IVGGLAANPGEFPWIV--------SLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSA 168
           I+GG  A P   P++         SLKR     CGG +I + +++TAAHC          
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSLKR-----CGGFLIQDDFVLTAAHCW--------G 47
Query: 169 SQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPA 226
           S INVTL  H++    P+   +PV R + HP+++  +F+NDI LL+L R  + +  ++P 
Sbjct: 48  SSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPL 107
Query: 227 CLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKI 285
            LPS        Q+ +VAGWG T      G+ S+ LQ+V ++V  ++ C    +S+ +  
Sbjct: 108 RLPSNKAQVKPGQTCSVAGWGQTA---PLGKHSHTLQEVKMTVQEDRKC----ESDLRHY 160
Query: 286 NVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL 345
                ++C G  +  K +                               + DSGGPL+  
Sbjct: 161 YDSTIELCVGDPEIKKTS------------------------------FKGDSGGPLVC- 189
Query: 346 GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              +    G+VS G     P  P   T+++ ++ WI  T+
Sbjct: 190 ---NKVAQGIVSYGRNNGMP--PRACTKVSSFVHWIKKTM 224

>pdb|1IAU|A Chain A, Human Granzyme B In Complex With Ac-Iepd-Cho Length = 227

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 67/280 (23%)
Query: 117 IVGGLAANPGEFPWIV--------SLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSA 168
           I+GG  A P   P++         SLKR     CGG +I + +++TAAHC          
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSLKR-----CGGFLIRDDFVLTAAHCW--------G 47
Query: 169 SQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPA 226
           S INVTL  H++    P+   +PV R + HP+++  +F+NDI LL+L R  + +  ++P 
Sbjct: 48  SSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPL 107
Query: 227 CLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKI 285
            LPS        Q+ +VAGWG T      G+ S+ LQ+V ++V  ++ C    +S+ +  
Sbjct: 108 RLPSNKAQVKPGQTCSVAGWGQTA---PLGKHSHTLQEVKMTVQEDRKC----ESDLRHY 160
Query: 286 NVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL 345
                ++C G  +  K +                               + DSGGPL+  
Sbjct: 161 YDSTIELCVGDPEIKKTS------------------------------FKGDSGGPLVC- 189
Query: 346 GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              +    G+VS G     P  P   T+++ ++ WI  T+
Sbjct: 190 ---NKVAQGIVSYGRNNGMP--PRACTKVSSFVHWIKKTM 224

>pdb|1OS8|A Chain A, Recombinant Streptomyces Griseus Trypsin Length = 223

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 53/268 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A  GEFP++V L       CGG +  +  ++TAAHC+    +  S   I  T  
Sbjct: 1   VVGGTRAAQGEFPFMVRLSMG----CGGALYAQDIVLTAAHCVSGSGNNTS---ITATGG 53
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             DL   S   V   +++  P ++ +    D AL++L + I      +P    + +  Y+
Sbjct: 54  VVDLQSSSAVKVRSTKVLQAPGYNGT--GKDWALIKLAQPIN-----QPTLKIATTTAYN 106
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           + + TVAGWG   E  SQ R    L K  +  VS+  C++ Y +E     V   ++CAG+
Sbjct: 107 QGTFTVAGWGANREGGSQQR---YLLKANVPFVSDAACRSAYGNE----LVANEEICAGY 159
Query: 297 -EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-GAESTQVIG 354
            + GG D C                              Q DSGGP+     A+    +G
Sbjct: 160 PDTGGVDTC------------------------------QGDSGGPMFRKDNADEWIQVG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWIS 382
           +VS G GCARP  PG+YT ++ +   I+
Sbjct: 190 IVSWGYGCARPGYPGVYTEVSTFASAIA 217

>pdb|2ZGJ|A Chain A, Crystal Structure Of D86n-gzmm Complexed With Its Optimal Synthesized Substrate Length = 240

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 11/161 (6%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG    P   P++ SL+R+G H CGG ++H +W++TAAHCL         +Q+ + L 
Sbjct: 1   IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQ-----RMAQLRLVLG 55
Query: 177 EHDLSRPSISTVPVLRIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACLPSG-SLD 234
            H L  P + T  +   + HP +    +  N++ALL+L   ++ S  IRP  LPS   + 
Sbjct: 56  LHTLDSPGL-TFHIKAAIQHPRYKPVPALENNLALLQLDGKVKPSRTIRPLALPSKRQVV 114
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ 275
            +    ++AGWG T++    GR S +L+++ L V+  ++C 
Sbjct: 115 AAGTRCSMAGWGLTHQG---GRLSRVLRELDLQVLDTRMCN 152

>pdb|3BSQ|A Chain A, Crystal Structure Of Human Kallikrein 7 Produced As A Secretion Protein In E.Coli Length = 227

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+ G     G  PW V+L       CGG +++E+W++TAAHC  N        +  V L 
Sbjct: 1   IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKMN--------EYTVHLG 52
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
              L       +   +   HP +S  +  ND+ L++L    + S +++   LPS   +  
Sbjct: 53  SDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPS-RCEPP 111
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
             + TV+GWG T  +P     S+++  V + ++S Q C   Y+       ++ S +CAG 
Sbjct: 112 GTTCTVSGWG-TTTSPDVTFPSDLMC-VDVKLISPQDCTKVYKDL-----LENSMLCAGI 164
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
               K+AC                                DSGGPL+  G     + GLV
Sbjct: 165 PDSKKNAC------------------------------NGDSGGPLVCRGT----LQGLV 190
Query: 357 STG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           S G   C +P  PG+YT++ ++  WI+DT+
Sbjct: 191 SWGTFPCGQPNDPGVYTQVCKFTKWINDTM 220

>pdb|1OSS|A Chain A, T190p Streptomyces Griseus Trypsin In Complex With Benzamidine Length = 223

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 53/268 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A  GEFP++V L       CGG +  +  ++TAAHC+    +  S   I  T  
Sbjct: 1   VVGGTRAAQGEFPFMVRLSMG----CGGALYAQDIVLTAAHCVSGSGNNTS---ITATGG 53
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             DL   S   V   +++  P ++ +    D AL++L + I      +P    + +  Y+
Sbjct: 54  VVDLQSSSAVKVRSTKVLQAPGYNGT--GKDWALIKLAQPIN-----QPTLKIATTTAYN 106
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           + + TVAGWG   E  SQ R    L K  +  VS+  C++ Y +E     V   ++CAG+
Sbjct: 107 QGTFTVAGWGANREGGSQQR---YLLKANVPFVSDAACRSAYGNE----LVANEEICAGY 159
Query: 297 -EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-GAESTQVIG 354
            + GG D C                              Q DSGGP+     A+    +G
Sbjct: 160 PDTGGVDPC------------------------------QGDSGGPMFRKDNADEWIQVG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWIS 382
           +VS G GCARP  PG+YT ++ +   I+
Sbjct: 190 IVSWGYGCARPGYPGVYTEVSTFASAIA 217

>pdb|4H4F|A Chain A, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound To Inhibitor Eglin C From Hirudo Medicinalis Length = 249

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 54/282 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQI 171
           +VGG  A P  +PW +SL+        H CGGT+I   +++TAAHC+ N  +  ++  + 
Sbjct: 1   VVGGEDARPHSWPWQISLQYLKNDTWRHTCGGTLIASNFVLTAAHCISNTRTYRVAVGKN 60
Query: 172 NVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS- 230
           N+ +++ + S      V V  I  H   +     NDIAL++L   ++ SD I+ ACLP  
Sbjct: 61  NLEVEDEEGSL----FVGVDTIHVHKRWNALLLRNDIALIKLAEHVELSDTIQVACLPEK 116
Query: 231 GSLDYSEQSVTVAGWG--WTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
            SL   +    V GWG  WTN     G  ++ LQ+    VV +  C    + +     VK
Sbjct: 117 DSLLPKDYPCYVTGWGRLWTN-----GPIADKLQQGLQPVVDHATCS---RIDWWGFRVK 168
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLML-LGA 347
           ++ +CAG + G   AC                                DSGGPL   L  
Sbjct: 169 KTMVCAGGD-GVISAC------------------------------NGDSGGPLNCQLEN 197
Query: 348 ESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDI 387
            S +V G+VS G   GC   + P +YTR++ YI WI++ + +
Sbjct: 198 GSWEVFGIVSFGSRRGCNTRKKPVVYTRVSAYIDWINEKMQL 239

>pdb|1HAX|B Chain B, Snapshots Of Serine Protease Catalysis: (A) Acyl-Enzyme Intermediate Between Porcine Pancreatic Elastase And Human Beta-Casomorphin-7 At Ph 5 Length = 240

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 128/280 (45%), Gaps = 54/280 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A    +P  +SL+   G    H CGGT+I + W++TAAHC+      L+     
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV---DRELT---FR 54
Query: 173 VTLKEHDLSRPSIST--VPVLRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACL 228
           V + EH+L++ + +   V V +I+ HP  +        DIALL L +S+  +  ++   L
Sbjct: 55  VVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 114
Query: 229 P-SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
           P +G++  +     + GWG T  N   G+ +  LQ+  L  V   +C +   S      V
Sbjct: 115 PRAGTILRNNSPCYITGWGLTRTN---GQLAQTLQQAYLPTVDYAICSS---SSYWGSTV 168
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
           K S +CAG + G +  C                              Q DSGGPL  L  
Sbjct: 169 KNSMVCAGGD-GVRSGC------------------------------QGDSGGPLHCLVN 197
Query: 348 ESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
               V G+ S  + +GC   R P ++TR++ YI WI++ +
Sbjct: 198 GQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237

>pdb|2EST|E Chain E, Crystallographic Study Of The Binding Of A Trifluoroacetyl Dipeptide Anilide Inhibitor With Elastase Length = 240

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 128/280 (45%), Gaps = 54/280 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A    +P  +SL+   G    H CGGT+I + W++TAAHC+      L+     
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV---DRELT---FR 54
Query: 173 VTLKEHDLSRPSIST--VPVLRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACL 228
           V + EH+L++ + +   V V +I+ HP  +        DIALL L +S+  +  ++   L
Sbjct: 55  VVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 114
Query: 229 P-SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
           P +G++  +     + GWG T  N   G+ +  LQ+  L  V   +C +   S      V
Sbjct: 115 PRAGTILANNSPCYITGWGLTRTN---GQLAQTLQQAYLPTVDYAICSS---SSYWGSTV 168
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
           K S +CAG + G +  C                              Q DSGGPL  L  
Sbjct: 169 KNSMVCAGGD-GVRSGC------------------------------QGDSGGPLHCLVN 197
Query: 348 ESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
               V G+ S  + +GC   R P ++TR++ YI WI++ +
Sbjct: 198 GQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237

>pdb|2XXL|A Chain A, Crystal Structure Of Drosophila Grass Clip Serine Protease Of Toll Pathway Length = 408

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 132/312 (42%), Gaps = 81/312 (25%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRH----GGHFCGGTIIHEQWIVTAAHCLC 160
           CG  L+ R    +  G        PW+  L+          CGG +I E++I+TAAHC+ 
Sbjct: 111 CGNFLSQR----VSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCV- 165
Query: 161 NGPSPLSASQINVTLKEHDLSR--------------PSISTVPVLRIMFHPSHSCSSFNN 206
                L      + L EH +S               P +  V + + + H  +      +
Sbjct: 166 ---HGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMH 222
Query: 207 DIALLELTRSIQWSDLIRPACLP-SGSLDYSEQSVT---VAGWGWTNENPSQGRRSNILQ 262
           DIALL+L RS+ +   I+P CLP +  L    + ++   V GWG T EN   G  S++L 
Sbjct: 223 DIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWG-TTEN---GSSSDVLL 278
Query: 263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGG--KDACWVSRQWWTPHVARGRV 320
           +  + +     C   Y+       V  SQ+C G   GG  +D+C                
Sbjct: 279 QANVPLQPRSACSQAYRRA-----VPLSQLCVG---GGDLQDSC---------------- 314
Query: 321 YPSHRSGVHWDPPLQADSGGPL----MLLGAESTQVI--GLVSTG-IGCARPRLPGLYTR 373
                         + DSGGPL      LG  + +++  G+VS G + C +  LPGLYT 
Sbjct: 315 --------------KGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTN 360
Query: 374 LTRYIGWISDTL 385
           +  Y+ WI+DT+
Sbjct: 361 VGEYVQWITDTM 372

>pdb|1BDA|A Chain A, Catalytic Domain Of Human Single Chain Tissue Plasminogen Activator In Complex With Dansyl-Egr-Cmk (Dansyl-Glu-Gly-Arg Chloromethyl Ketone) Length = 265

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 127/302 (42%), Gaps = 61/302 (20%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGH--FCGGTIIHEQWIVTAAHC 158
           CG    S+   +I GGL A+    PW  ++    +R  G    CGG +I   WI++AAHC
Sbjct: 2   CGLRQYSQPQFRIKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHC 61
Query: 159 LCNGPSPLSASQINVTLKEHDLSRP--SISTVPVLRIMFHPSHSCSSFNNDIALLEL--- 213
                 P     + V L       P        V + + H      +++NDIALL+L   
Sbjct: 62  FQERFPP---HHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSD 118
Query: 214 -TRSIQWSDLIRPACLPSGSL---DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV 269
            +R  Q S ++R  CLP   L   D++E  ++    G+          S  L++  + + 
Sbjct: 119 SSRCAQESSVVRTVCLPPADLQLPDWTECELS----GYGKHEALSPFYSERLKEAHVRLY 174
Query: 270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGG------KDACWVSRQWWTPHVARGRVYPS 323
            +  C + +        V ++ +CAG  + G       DAC                   
Sbjct: 175 PSSRCTSQHLLNR---TVTDNMLCAGDTRSGGPQANLHDAC------------------- 212
Query: 324 HRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISD 383
                      Q DSGGPL+ L      ++G++S G+GC +  +PG+YT++T Y+ WI D
Sbjct: 213 -----------QGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRD 261
Query: 384 TL 385
            +
Sbjct: 262 NM 263

>pdb|1EAI|A Chain A, Complex Of Ascaris Chymotrpsin/elastase Inhibitor With Porcine Elastase Length = 240

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 127/280 (45%), Gaps = 54/280 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A    +P  +SL+   G    H CGGT+I + W++TAAHC+      L+     
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV---DRELT---FR 54
Query: 173 VTLKEHDLSRP--SISTVPVLRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACL 228
           V + EH+L++   +   V V +I+ HP  +        DIALL L +S+  +  ++   L
Sbjct: 55  VVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 114
Query: 229 P-SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
           P +G++  +     + GWG T  N   G+ +  LQ+  L  V   +C +   S      V
Sbjct: 115 PRAGTILANNSPCYITGWGLTRTN---GQLAQTLQQAYLPTVDYAICSS---SSYWGSTV 168
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
           K S +CAG + G +  C                              Q DSGGPL  L  
Sbjct: 169 KNSMVCAGGD-GVRSGC------------------------------QGDSGGPLHCLVN 197
Query: 348 ESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
               V G+ S  + +GC   R P ++TR++ YI WI++ +
Sbjct: 198 GQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237

>pdb|1SGT|A Chain A, Refined Crystal Structure Of Streptomyces Griseus Trypsin At 1.7 Angstroms Resolution Length = 223

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 53/268 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A  GEFP++V L       CGG +  +  ++TAAHC+    +  S   I  T  
Sbjct: 1   VVGGTRAAQGEFPFMVRLSMG----CGGALYAQDIVLTAAHCVSGSGNNTS---ITATGG 53
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             DL   +   V   +++  P ++ +    D AL++L + I      +P    + +  Y+
Sbjct: 54  VVDLQSGAAVKVRSTKVLQAPGYNGT--GKDWALIKLAQPIN-----QPTLKIATTTAYN 106
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           + + TVAGWG   E  SQ R    L K  +  VS+  C++ Y +E     V   ++CAG+
Sbjct: 107 QGTFTVAGWGANREGGSQQR---YLLKANVPFVSDAACRSAYGNE----LVANEEICAGY 159
Query: 297 -EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-GAESTQVIG 354
            + GG D C                              Q DSGGP+     A+    +G
Sbjct: 160 PDTGGVDTC------------------------------QGDSGGPMFRKDNADEWIQVG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWIS 382
           +VS G GCARP  PG+YT ++ +   I+
Sbjct: 190 IVSWGYGCARPGYPGVYTEVSTFASAIA 217

>pdb|3I78|A Chain A, 3599170186220-Loops Of Fxa In Sgt Length = 229

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 116/268 (43%), Gaps = 47/268 (17%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           +VGG  A  GEFP++V L       FCGG +  +  ++TAAHC+    +  S   I  T 
Sbjct: 1   VVGGTRAAQGEFPFMVRLINEENEGFCGGALYAQDIVLTAAHCVSGSGNNTS---ITATG 57
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
              DL   S   V   +++  P  +  ++  D AL++L + I      +P    + +  Y
Sbjct: 58  GVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPIN-----QPTLKIATTTAY 112
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
           ++ + TVAGWG   E  SQ R    L K  +  VS+  C    +S    I V    +CAG
Sbjct: 113 NQGTFTVAGWGANREGGSQQR---YLLKANVPFVSDAAC----RSSSSFILVANEMICAG 165
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-GAESTQVIG 354
           ++   +D C                              Q DSGGP+     A+    +G
Sbjct: 166 YDTKQEDTC------------------------------QGDSGGPMFRKDNADEWVQVG 195
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWIS 382
           +VS G GCAR    G+YT ++ +   I+
Sbjct: 196 IVSWGEGCARKGKYGVYTEVSTFASAIA 223

>pdb|2FMJ|A Chain A, 220-Loop Mutant Of Streptomyces Griseus Trypsin Length = 222

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A  GEFP++V L       CGG +  +  ++TAAHC+    +  S   I  T  
Sbjct: 1   VVGGTRAAQGEFPFMVRLSMG----CGGALYAQDIVLTAAHCVSGSGNNTS---ITATGG 53
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             DL   S   V   +++  P ++ +    D AL++L + I      +P    + +  Y+
Sbjct: 54  VVDLQSSSAVKVRSTKVLQAPGYNGT--GKDWALIKLAQPIN-----QPTLKIATTTAYN 106
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           + + TVAGWG   E  SQ R    L K  +  VS+  C++ Y +E     V   ++CAG+
Sbjct: 107 QGTFTVAGWGANREGGSQQR---YLLKANVPFVSDAACRSAYGNE----LVANEEICAGY 159
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-GAESTQVIGL 355
           + GG D C                              Q DSGGP+     A+    +G+
Sbjct: 160 DTGGVDTC------------------------------QGDSGGPMFRKDNADEWIQVGI 189
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWIS 382
           VS G GCAR    G+YT ++ +   I+
Sbjct: 190 VSWGEGCARKGKYGVYTEVSTFASAIA 216

>pdb|1SI5|H Chain H, Protease-Like Domain From 2-Chain Hepatocyte Growth Factor Length = 240

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 52/261 (19%)
Query: 130 WIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL----SRPSI 185
           W+VSL+    H CGG++I E W++TA  C    PS          L  HD+         
Sbjct: 13  WMVSLRYRNKHICGGSLIKESWVLTARQCF---PS-RDLKDYEAWLGIHDVHGRGDEKCK 68
Query: 186 STVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GSLDYSEQSVTVAG 244
             + V ++++ P  S      D+ L++L R     D +    LP+ GS    + S +V G
Sbjct: 69  QVLNVSQLVYGPEGS------DLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYG 122
Query: 245 WGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDAC 304
           WG+T      G    +L+   L ++ N+ C    Q    K+ + ES++CAG E+ G   C
Sbjct: 123 WGYTGLINYDG----LLRVAHLYIMGNEKCS---QHHRGKVTLNESEICAGAEKIGSGPC 175
Query: 305 WVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCAR 364
                                         + D GGPL+    +   V+G++  G GCA 
Sbjct: 176 ------------------------------EGDYGGPLVCEQHKMRMVLGVIVPGRGCAI 205
Query: 365 PRLPGLYTRLTRYIGWISDTL 385
           P  PG++ R+  Y  WI   +
Sbjct: 206 PNRPGIFVRVAYYAKWIHKII 226

>pdb|1SHY|A Chain A, The Crystal Structure Of Hgf Beta-Chain In Complex With The Sema Domain Of The Met Receptor Length = 234

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 52/261 (19%)
Query: 130 WIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL----SRPSI 185
           W+VSL+    H CGG++I E W++TA  C    PS          L  HD+         
Sbjct: 13  WMVSLRYRNKHICGGSLIKESWVLTARQCF---PS-RDLKDYEAWLGIHDVHGRGDEKCK 68
Query: 186 STVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-GSLDYSEQSVTVAG 244
             + V ++++ P  S      D+ L++L R     D +    LP+ GS    + S +V G
Sbjct: 69  QVLNVSQLVYGPEGS------DLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYG 122
Query: 245 WGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDAC 304
           WG+T      G    +L+   L ++ N+ C    Q    K+ + ES++CAG E+ G   C
Sbjct: 123 WGYTGLINYDG----LLRVAHLYIMGNEKCS---QHHRGKVTLNESEICAGAEKIGSGPC 175
Query: 305 WVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCAR 364
                                         + D GGPL+    +   V+G++  G GCA 
Sbjct: 176 ------------------------------EGDYGGPLVCEQHKMRMVLGVIVPGRGCAI 205
Query: 365 PRLPGLYTRLTRYIGWISDTL 385
           P  PG++ R+  Y  WI   +
Sbjct: 206 PNRPGIFVRVAYYAKWIHKII 226

>pdb|2PSX|A Chain A, Crystal Structure Of Human Kallikrein 5 In Complex With Leupeptin Length = 227

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 56/274 (20%)
Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           I+ G   +    PW  +L  R    +CG  ++H QW++TAAHC              V L
Sbjct: 1   IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHC--------RKKVFRVRL 52
Query: 176 KEHDLSRPSISTVPVL---RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
             + LS    S   +    + + HP +S    +ND+ L++L R I+ +  +RP  + S  
Sbjct: 53  GHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINV-SSH 111
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
              +     V+GWG T ++P Q     +LQ + +SV+S + C+  Y  +     + ++  
Sbjct: 112 CPSAGTKCLVSGWG-TTKSP-QVHFPKVLQCLNISVLSQKRCEDAYPRQ-----IDDTMF 164
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG ++ G+D+C                              Q DSGGP++  G+    +
Sbjct: 165 CAG-DKAGRDSC------------------------------QGDSGGPVVCNGS----L 189
Query: 353 IGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
            GLVS G   CARP  PG+YT L ++  WI +T+
Sbjct: 190 QGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETI 223

>pdb|1FON|A Chain A, Crystal Structure Of Bovine Procarboxypeptidase A-S6 Subunit Iii, A Highly Structured Truncated Zymogen E Length = 240

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 129/280 (46%), Gaps = 58/280 (20%)
Query: 120 GLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           G  A P  + W VSL+        H CGG++I   W+VTA HC+       ++    V L
Sbjct: 2   GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS------TSRTYQVVL 55
Query: 176 KEHDLS--RPSISTVPVL--RIMFHP--SHSCSSFNNDIALLELTRSIQWSDLIRPACL- 228
            E+D S    S   +P+    +  HP  + +C +  NDIAL++L+RS Q  D ++ A L 
Sbjct: 56  GEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLP 115
Query: 229 PSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
           P+G +  +E    ++GWG      + G   + LQ+  L  V  + C  W   +   I VK
Sbjct: 116 PAGDILPNEAPCYISGWG---RLYTGGPLPDKLQQALLPTVDYEHCSQW---DWWGITVK 169
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           ++ +CAG +                           RSG +       DSGGPL    A+
Sbjct: 170 KTMVCAGGDT--------------------------RSGCN------GDSGGPLNCPAAD 197
Query: 349 -STQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
            S QV G+ S  +  GC   + P ++TR++ +I WI +T+
Sbjct: 198 GSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETI 237

>pdb|1RTF|B Chain B, Complex Of Benzamidine With The Catalytic Domain Of Human Two Chain Tissue Plasminogen Activator [(Tc)-T-Pa] Length = 252

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 122/290 (42%), Gaps = 61/290 (21%)
Query: 117 IVGGLAANPGEFPWIVSL----KRHGGH--FCGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
           I GGL A+    PW  ++    +R  G    CGG +I   WI++AAHC      P     
Sbjct: 1   IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPP---HH 57
Query: 171 INVTLKEHDLSRP--SISTVPVLRIMFHPSHSCSSFNNDIALLEL----TRSIQWSDLIR 224
           + V L       P        V + + H      +++NDIALL+L    +R  Q S ++R
Sbjct: 58  LTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVR 117
Query: 225 PACLPSGSL---DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSE 281
             CLP   L   D++E  ++    G+          S  L++  + +  +  C + +   
Sbjct: 118 TVCLPPADLQLPDWTECELS----GYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLN 173
Query: 282 GKKINVKESQMCAGHEQGG------KDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ 335
                V ++ +CAG  + G       DAC                              Q
Sbjct: 174 R---TVTDNMLCAGDTRSGGPQANLHDAC------------------------------Q 200
Query: 336 ADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            DSGGPL+ L      ++G++S G+GC +  +PG+YT++T Y+ WI D +
Sbjct: 201 GDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNM 250

>pdb|1PYT|D Chain D, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 251

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 124/284 (43%), Gaps = 53/284 (18%)
Query: 114 TGKIVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSAS 169
           + ++VGG  A P  +PW +SL+        H CGGT+I    ++TAAHC+ N  +     
Sbjct: 11  SARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTLT----- 65
Query: 170 QINVTLKEHDLSRPSIS---TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPA 226
              V L +++L     +    V V  I  H   +     NDIAL++L  +++  D I+ A
Sbjct: 66  -YRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVA 124
Query: 227 CLPS-GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKI 285
           CLPS GSL   +    V GWG    N   G  +  LQ+    VV    C    Q +    
Sbjct: 125 CLPSEGSLLPQDYPCFVTGWGRLYTN---GPIAAELQQGLQPVVDYATCS---QRDWWGT 178
Query: 286 NVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL 345
            VKE+ +CAG + G   AC                                DSGGPL   
Sbjct: 179 TVKETMVCAGGD-GVISAC------------------------------NGDSGGPLNCQ 207
Query: 346 GAESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
                 V G+VS  +G+ C   + P ++TR++ YI WI+  L +
Sbjct: 208 ADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKLQL 251

>pdb|1TON|A Chain A, Rat Submaxillary Gland Serine Protease, Tonin. Structure Solution And Refinement At 1.8 Angstroms Resolution Length = 235

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 113/280 (40%), Gaps = 60/280 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        PW V++     + CGG +I   W++TAAHC  N    L     N   K
Sbjct: 1   IVGGYKCEKNSQPWQVAVINE--YLCGGVLIDPSWVITAAHCYSNNYQVLLGR--NNLFK 56
Query: 177 EHDLSR----------PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPA 226
           +   ++          P    + V      P H  S   ND+ LL L+     +  ++  
Sbjct: 57  DEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHS---NDLMLLHLSEPADITGGVKVI 113
Query: 227 CLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN 286
            LP+      +   T    GW + NPS+   S+ LQ V + ++SN+ C   Y     K N
Sbjct: 114 DLPTKE---PKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETY-----KDN 165
Query: 287 VKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG 346
           V +  +CAG  +GGKD C                                DSGGPL+  G
Sbjct: 166 VTDVMLCAGEMEGGKDTC------------------------------AGDSGGPLICDG 195
Query: 347 AESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
                + G+ S G   CA+P+ P +Y +L ++  WI   +
Sbjct: 196 V----LQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVM 231

>pdb|1MTN|B Chain B, Bovine Alpha-Chymotrypsin:bpti Crystallization Length = 131

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IV G  A PG +PW VSL+ + G HFCGG++I+E W+VTAAHC       + A +     
Sbjct: 1   IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSDVVVAGEF---- 56
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
            +   S   I  + + ++  +  ++  + NNDI LL+L+ +  +S  +   CLPS S D+
Sbjct: 57  -DQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDF 115
Query: 236 SEQSVTV-AGWGWT 248
           +  +  V  GWG T
Sbjct: 116 AAGTTCVTTGWGLT 129

>pdb|3BEU|A Chain A, Na+-Dependent Allostery Mediates Coagulation Factor Protease Active Site Selectivity Length = 224

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 115/267 (43%), Gaps = 50/267 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A  GEFP++V L       CGG +  +  ++TAAHC+    +  S   I  T  
Sbjct: 1   VVGGTRAAQGEFPFMVRLSMG----CGGALYAQDIVLTAAHCVSGSGNNTS---ITATGG 53
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             DL   S   V   +++  P  +  ++  D AL++L + I      +P    + +  Y+
Sbjct: 54  VVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPIN-----QPTLKIATTTAYN 108
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           + + TVAGWG   E  SQ R    L K  +  VS+  C    +S    I V    +CAG+
Sbjct: 109 QGTFTVAGWGANREGGSQQR---YLLKANVPFVSDAAC----RSSSSFILVANEMICAGY 161
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-GAESTQVIGL 355
           +   +D C                              Q DSGGP+     A+    +G+
Sbjct: 162 DTKQEDTC------------------------------QGDSGGPMFRKDNADEWVQVGI 191
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWIS 382
           VS G GCAR    G+YT ++ +   I+
Sbjct: 192 VSWGEGCARKGKYGVYTEVSTFASAIA 218

>pdb|3FZZ|A Chain A, Structure Of Grc Length = 227

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 62/278 (22%)
Query: 117 IVGGLAANPGEFPWIVSLK--RHGGH--FCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG   +P   P++   +  + GG   FCGG ++ +++++TAAHC            + 
Sbjct: 1   IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHC--------KGRSMT 52
Query: 173 VTLKEHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H++     +   +PV + + HP ++    +NDI LL+L R+ + +  +RP  LP 
Sbjct: 53  VTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPR 112
Query: 231 GSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            +          VAGWG    +   G     L +V L+V  +QVC++ +QS   + N   
Sbjct: 113 RNAHVKPGDECYVAGWGKVTPD---GEFPKTLHEVKLTVQKDQVCESQFQSSYNRAN--- 166
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
            ++C G  +                  +G  +             + DSGGPL+   A +
Sbjct: 167 -EICVGDSK-----------------IKGASF-------------EEDSGGPLVCKRAAA 195
Query: 350 TQVIGLVSTG--IGCARPRLPGLYTRLTRYIGWISDTL 385
               G+VS G   G A    P ++TR+  ++ WI  T+
Sbjct: 196 ----GIVSYGQTDGSA----PQVFTRVLSFVSWIKKTM 225

>pdb|2ZCH|P Chain P, Crystal Structure Of Human Prostate Specific Antigen Complexed With An Activating Antibody Length = 237

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 109/283 (38%), Gaps = 64/283 (22%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        PW V +   G   CGG ++H QW++TAAHC+ N        +  + L 
Sbjct: 1   IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRN--------KSVILLG 52
Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNN-----------DIALLELTRSIQWSDLI 223
            H L  P  +     V     HP +  S   N           D+ LL L+   + +D +
Sbjct: 53  RHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAV 112
Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
           +   LP+          T    GW +  P +      LQ V L V+SN VC   +  +  
Sbjct: 113 KVMDLPTQE---PALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQK-- 167
Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
              V +  +CAG   GGK  C                                DSGGPL+
Sbjct: 168 ---VTKFMLCAGRWTGGKSTC------------------------------SGDSGGPLV 194
Query: 344 LLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
             G     + G+ S G   CA P  P LYT++  Y  WI DT+
Sbjct: 195 CNGV----LQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTI 233

>pdb|3G01|A Chain A, Structure Of Grc Mutant E192rE193G Length = 227

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 62/278 (22%)
Query: 117 IVGGLAANPGEFPWIVSLK--RHGGH--FCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG   +P   P++   +  + GG   FCGG ++ +++++TAAHC            + 
Sbjct: 1   IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHC--------KGRSMT 52
Query: 173 VTLKEHDLS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H++     +   +PV + + HP ++    +NDI LL+L R+ + +  +RP  LP 
Sbjct: 53  VTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPR 112
Query: 231 GSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            +          VAGWG    +   G     L +V L+V  +QVC++ +QS   + N   
Sbjct: 113 RNAHVKPGDECYVAGWGKVTPD---GEFPKTLHEVKLTVQKDQVCESQFQSSYNRAN--- 166
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
            ++C G  +                  +G  +             + DSGGPL+   A +
Sbjct: 167 -EICVGDSK-----------------IKGASF-------------RGDSGGPLVCKRAAA 195
Query: 350 TQVIGLVSTG--IGCARPRLPGLYTRLTRYIGWISDTL 385
               G+VS G   G A    P ++TR+  ++ WI  T+
Sbjct: 196 ----GIVSYGQTDGSA----PQVFTRVLSFVSWIKKTM 225

>pdb|2AIP|A Chain A, Crystal Structure Of Native Protein C Activator From The Venom Of Copperhead Snake Agkistrodon Contortrix Contortrix Length = 231

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 56/273 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG   N  E  ++ +L    G  CGGT+I+++W++TA HC            + + L 
Sbjct: 1   VIGGDECNINEHRFL-ALVYANGSLCGGTLINQEWVLTARHC--------DRGNMRIYLG 51
Query: 177 EHD---LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H+   L++ ++   P  +     + + + ++ DI L+ L R ++ S  I P  LPS   
Sbjct: 52  MHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPP 111
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
                   + GWG T  +P+     ++     ++++   VCQA Y+       +  + +C
Sbjct: 112 SVGS-VCRIMGWG-TITSPN-ATLPDVPHCANINILDYAVCQAAYKG------LAATTLC 162
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG  +GGKD C                              + DSGGPL+  G    Q  
Sbjct: 163 AGILEGGKDTC------------------------------KGDSGGPLICNG----QFQ 188
Query: 354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           G++S G   CA+PR PG+YT++  Y  WI   +
Sbjct: 189 GILSVGGNPCAQPRKPGIYTKVFDYTDWIQSII 221

>pdb|1SGF|A Chain A, Crystal Structure Of 7s Ngf: A Complex Of Nerve Growth Factor With Four Binding Proteins (serine Proteinases) Length = 240

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 64/271 (23%)
Query: 129 PWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL--SRPSIS 186
           PW V++ R   + CGG ++   W++TAAHC           +  V L +++     PS  
Sbjct: 16  PWHVAVYRFNKYQCGGVLLDRNWVLTAAHCY--------NDKYQVWLGKNNFLEDEPSDQ 67
Query: 187 TVPVLRIMFHPSHSCS-----------SFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
              V + + HP  + S            ++ND+ LL L++    +D+++P  LP+   + 
Sbjct: 68  HRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPT---EE 124
Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
            +   T    GW +  P + +  + LQ V L ++ N+ C      +  ++ V ++ +CAG
Sbjct: 125 PKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDC-----DKAHEMKVTDAMLCAG 179
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
              GG   C                              + DSGGPL+  G     + G+
Sbjct: 180 EMDGGSYTC------------------------------EHDSGGPLICDGI----LQGI 205
Query: 356 VSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
            S G   C  P  P +YT+L ++  WI +T+
Sbjct: 206 TSWGPEPCGEPTEPSVYTKLIKFSSWIRETM 236

>pdb|2VNT|A Chain A, Urokinase-Type Plasminogen Activator Inhibitor Complex With A 1-(7-Sulphoamidoisoquinolinyl)guanidine Length = 276

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 124/297 (41%), Gaps = 65/297 (21%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCL 159
           CG+     R  KI+GG        PW  ++ +RH G    + CGG+++   W+++A HC 
Sbjct: 13  CGQKTLRPRF-KIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCF 71
Query: 160 CNGPSP------LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALL 211
            + P        L  S++N   +             V  ++ H  +S  +   +NDIALL
Sbjct: 72  IDYPKKEDYIVYLGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALL 124
Query: 212 ELT----RSIQWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVAL 266
           ++     R  Q S  I+  CLPS   D     S  + G+G   EN +       L+   +
Sbjct: 125 KIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVV 182
Query: 267 SVVSNQVCQA--WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSH 324
            ++S++ CQ   +Y SE     V    +CA   Q   D+C                    
Sbjct: 183 KLISHRECQQPHYYGSE-----VTTKMLCAADPQWKTDSC-------------------- 217
Query: 325 RSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
                     Q DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 218 ----------QGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 264

>pdb|2BDG|A Chain A, Human Kallikrein 4 Complex With Nickel And P-aminobenzamidine Length = 223

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 112/273 (41%), Gaps = 56/273 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+ G   +P   PW  +L      FC G ++H QW+++AAHC  N           + L 
Sbjct: 1   IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQN--------SYTIGLG 52
Query: 177 EHDLS---RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H L     P    V     + HP ++     ND+ L++L  S+  SD IR   + S   
Sbjct: 53  LHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIAS-QC 111
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
             +  S  V+GWG      + GR   +LQ V +SVVS +VC   Y           S  C
Sbjct: 112 PTAGNSCLVSGWGLL----ANGRMPTVLQCVNVSVVSEEVCSKLYDPL-----YHPSMFC 162
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG  Q  KD+C                                DSGGPL+  G     + 
Sbjct: 163 AGGGQDQKDSC------------------------------NGDSGGPLICNG----YLQ 188
Query: 354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           GLVS G   C +  +PG+YT L ++  WI  T+
Sbjct: 189 GLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV 221

>pdb|1ORF|A Chain A, The Oligomeric Structure Of Human Granzyme A Reveals The Molecular Determinants Of Substrate Specificity Length = 234

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 51/275 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG    P   P++V L       C G +I + W++TAAHC  N  S        V L 
Sbjct: 1   IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRS-------QVILG 53
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H ++R  P+   + V +   +P +  ++   D+ LL+LT   + +  +    LP    D
Sbjct: 54  AHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDD 113
Query: 235 YSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
               ++  VAGWG T+ + S    S+ L++V ++++  +VC          + +  + +C
Sbjct: 114 VKPGTMCQVAGWGRTHNSASW---SDTLREVEITIIDRKVCNDRNHYNFNPV-IGMNMVC 169
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG  +GG+D+C                                DSG PL+  G       
Sbjct: 170 AGSLRGGRDSC------------------------------NGDSGSPLLCEGVFR---- 195
Query: 354 GLVSTGI--GCARPRLPGLYTRLT-RYIGWISDTL 385
           G+ S G+   C  PR PG+Y  L+ +++ WI  T+
Sbjct: 196 GVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230

>pdb|1OP8|A Chain A, Crystal Structure Of Human Granzyme A Length = 234

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 51/275 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG    P   P++V L       C G +I + W++TAAHC  N  S        V L 
Sbjct: 1   IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRS-------QVILG 53
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H ++R  P+   + V +   +P +  ++   D+ LL+LT   + +  +    LP    D
Sbjct: 54  AHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDD 113
Query: 235 YSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
               ++  VAGWG T+ + S    S+ L++V ++++  +VC          + +  + +C
Sbjct: 114 VKPGTMCQVAGWGRTHNSASW---SDTLREVNITIIDRKVCNDRNHYNFNPV-IGMNMVC 169
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG  +GG+D+C                                DSG PL+  G       
Sbjct: 170 AGSLRGGRDSC------------------------------NGDSGSPLLCEGVFR---- 195
Query: 354 GLVSTGI--GCARPRLPGLYTRLT-RYIGWISDTL 385
           G+ S G+   C  PR PG+Y  L+ +++ WI  T+
Sbjct: 196 GVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230

>pdb|3IG6|B Chain B, Low Molecular Weigth Human Urokinase Type Plasminogen Activator 2-[6- (3'-Aminomethyl-Biphenyl-3-Yloxy)-4-(3-Dimethylamino- Pyrrolidin-1- Yl)-3, 5-Difluoro-Pyridin-2-Yloxy]-4-Dimethylamino-Benzoic Acid Complex Length = 253

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 119/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG++I   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+  CLPS   D     S  + G+G   EN +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTICLPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1SPJ|A Chain A, Structure Of Mature Human Tissue Kallikrein (Human Kallikrein 1 Or Klk1) At 1.70 Angstrom Resolution With Vacant Active Site Length = 238

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 111/284 (39%), Gaps = 65/284 (22%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        PW  +L       CGG ++H QW++TAAHC+        +    + L 
Sbjct: 1   IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCI--------SDNYQLWLG 52
Query: 177 EHDL--SRPSISTVPVLRIMFHPSHSCS-----------SFNNDIALLELTRSIQ-WSDL 222
            H+L     +   V V     HP  + S            +++D+ LL LT      +D 
Sbjct: 53  RHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDA 112
Query: 223 IRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG 282
           ++   LP+   +  E   T    GW +  P      + LQ V L ++ N  C+  +  + 
Sbjct: 113 VKVVELPT---EEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQK- 168
Query: 283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL 342
               V +  +C GH +GGKD C                                DSGGPL
Sbjct: 169 ----VTDFMLCVGHLEGGKDTC------------------------------VGDSGGPL 194
Query: 343 MLLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           M  G     + G+ S G + C  P  P +  R+  Y+ WI DT+
Sbjct: 195 MCDGV----LQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTI 234

>pdb|1OWD|A Chain A, Substituted 2-naphthamidine Inhibitors Of Urokinase Length = 245

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG+++   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+  CLPS   D     S  + G+G   EN +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTICLPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1LMW|B Chain B, Lmw U-Pa Structure Complexed With Egrcmk (Glu-Gly-Arg Chloromethyl Ketone) Length = 253

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG+++   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+  CLPS   D     S  + G+G   EN +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTICLPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1SC8|U Chain U, Urokinase Plasminogen Activator B-Chain-J435 Complex Length = 262

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 123/297 (41%), Gaps = 65/297 (21%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCL 159
           CG+     R  KI+GG        PW  ++ +RH G    + CGG++I   W+++A HC 
Sbjct: 5   CGQKTLRPRF-KIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCF 63
Query: 160 CNGPSP------LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALL 211
            + P        L  S++N   +             V  ++ H  +S  +   +NDIALL
Sbjct: 64  IDYPKKEDYIVYLGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALL 116
Query: 212 ELT----RSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVAL 266
           ++     R  Q S  I+   LPS   D     S  + G+G   EN +       L+   +
Sbjct: 117 KIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVV 174
Query: 267 SVVSNQVCQA--WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSH 324
            ++S++ CQ   +Y SE     V    +CA   Q   D+C                    
Sbjct: 175 KLISHRECQQPHYYGSE-----VTTKMLCAADPQWKTDSC-------------------- 209
Query: 325 RSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
                     Q DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 210 ----------QGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 256

>pdb|1NN6|A Chain A, Human Pro-Chymase Length = 228

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 76/286 (26%)
Query: 115 GKIVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
           G+I+GG    P   P++  L+         FCGG +I   +++TAAHC        +   
Sbjct: 1   GEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHC--------AGRS 52
Query: 171 INVTLKEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACL 228
           I VTL  H+++    +   + V++   HP ++ S+ ++DI LL+L      +       L
Sbjct: 53  ITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLT-------L 105
Query: 229 PSGSLDYSEQ--------SVTVAGWGWTNE-NPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
             G+L +  Q           VAGWG T    P     S+ LQ+V L ++  Q C  +  
Sbjct: 106 AVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPG----SDTLQEVKLRLMDPQACSHFRD 161
Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
            +         Q+C G+ +  K A                               + DSG
Sbjct: 162 FD------HNLQLCVGNPRKTKSA------------------------------FKGDSG 185
Query: 340 GPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           GPL+  G       G+VS G   A+P  P ++TR++ Y  WI+  L
Sbjct: 186 GPLLCAGVAQ----GIVSYGRSDAKP--PAVFTRISHYRPWINQIL 225

>pdb|1AZZ|A Chain A, Fiddler Crab Collagenase Complexed To Ecotin Length = 226

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 51/267 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG+ A P  +P   +L     +FCGG++I  +WI+TAAHC+        A  ++V L 
Sbjct: 1   IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCM------DGAGFVDVVLG 54
Query: 177 EHDLSRPSISTVPVLRIMF--HPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H++     + V +    F  H +++    +NDIA++ L   +  +  I    LPS  + 
Sbjct: 55  AHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDVG 114
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
                VT  GWG  ++  S    S++L++V + ++SN  C A Y        V +  +C 
Sbjct: 115 VG-TVVTPTGWGLPSD--SALGISDVLRQVDVPIMSNADCDAVYGI------VTDGNICI 165
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
               GGK  C                                DSGGPL   G   T  I 
Sbjct: 166 -DSTGGKGTC------------------------------NGDSGGPLNYNGL--TYGIT 192
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWI 381
                 GC     P  +TR+T ++ WI
Sbjct: 193 SFGAAAGC-EAGYPDAFTRVTYFLDWI 218

>pdb|1PJP|A Chain A, The 2.2 A Crystal Structure Of Human Chymase In Complex With Succinyl- Ala-Ala-Pro-Phe-Chloromethylketone Length = 226

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 117/284 (41%), Gaps = 76/284 (26%)
Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG    P   P++  L+         FCGG +I   +++TAAHC        +   I 
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHC--------AGRSIT 52
Query: 173 VTLKEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H+++    +   + V++   HP ++ S+ ++DI LL+L      +       L  
Sbjct: 53  VTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLT-------LAV 105
Query: 231 GSLDYSEQS--------VTVAGWGWTNE-NPSQGRRSNILQKVALSVVSNQVCQAWYQSE 281
           G+L +  Q           VAGWG T    P     S+ LQ+V L ++  Q C  +   +
Sbjct: 106 GTLPFPSQKNFVPPGRMCRVAGWGRTGVLKPG----SDTLQEVKLRLMDPQACSHFRDFD 161
Query: 282 GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
                    Q+C G+ +  K A                               + DSGGP
Sbjct: 162 ------HNLQLCVGNPRKTKSA------------------------------FKGDSGGP 185
Query: 342 LMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           L+  GA      G+VS G   A+P  P ++TR++ Y  WI+  L
Sbjct: 186 LLCAGAAQ----GIVSYGRSDAKP--PAVFTRISHYQPWINQIL 223

>pdb|1NPM|A Chain A, Neuropsin, A Serine Protease Expressed In The Limbic System Of Mouse Brain Length = 225

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 59/277 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+ G    P   PW  +L +     CGG ++ ++W++TAAHC           + +V L 
Sbjct: 1   ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHC--------KKQKYSVRLG 52
Query: 177 EHDL---SRPSISTVPVLRIMFHPSHSCSS---FNNDIALLELTRSIQWSDLIRPACLPS 230
           +H L    +P    + V + + HP ++ S+    ++DI L+ L  S    D ++P  L +
Sbjct: 53  DHSLQSRDQPE-QEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLAN 111
Query: 231 GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                 ++ + ++GWG T  +P Q    N L    + + S   C+  Y  +     + E 
Sbjct: 112 LCPKVGQKCI-ISGWG-TVTSP-QENFPNTLNCAEVKIYSQNKCERAYPGK-----ITEG 163
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG   G  D C                              Q DSGGPL+  G    
Sbjct: 164 MVCAGSSNGA-DTC------------------------------QGDSGGPLVCDGM--- 189
Query: 351 QVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLD 386
            + G+ S G   C +P  PG+YT++ RY  WI  T+D
Sbjct: 190 -LQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTMD 225

>pdb|1O5A|B Chain B, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (Ala190 Upa) Length = 253

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG+++   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+  CLPS   D     S  + G+G   E  +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTICLPSMYNDPQFGTSCEITGFG--KEASTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   DAC                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDAC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1ELT|A Chain A, Structure Of Native Pancreatic Elastase From North Atlantic Salmon At 1.61 Angstroms Resolution Length = 236

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 120/282 (42%), Gaps = 59/282 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A P  +PW +SL+   G    H CGG++I + W++TAAHC+       SA    
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCV------DSARTWR 54
Query: 173 VTLKEHDLS----RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACL 228
           V L EH+L+    +  I TV  + I    +    +   DIALL L      +  ++ A L
Sbjct: 55  VVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAAL 114
Query: 229 -PSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA--WYQSEGKKI 285
            PS  +  +     + GWG   +  + G  S+ L++  L  V +  C +  W+ S     
Sbjct: 115 PPSNQILPNNNPCYITGWG---KTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGST---- 167
Query: 286 NVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL 345
            VK + +CAG   G    C                                DSGGPL   
Sbjct: 168 -VKTTMVCAG--GGANSGC------------------------------NGDSGGPLNCQ 194
Query: 346 GAESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
              S  V G+ S  +  GC   + P ++TR++ YI W++  +
Sbjct: 195 VNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM 236

>pdb|3N7O|A Chain A, X-Ray Structure Of Human Chymase In Complex With Small Molecule Inhibitor Length = 226

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 117/284 (41%), Gaps = 76/284 (26%)
Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG    P   P++  L+         FCGG +I   +++TAAHC        +   I 
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHC--------AGRSIT 52
Query: 173 VTLKEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H+++    +   + V++   HP ++ S+ ++DI LL+L      +       L  
Sbjct: 53  VTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLT-------LAV 105
Query: 231 GSLDYSEQ--------SVTVAGWGWTNE-NPSQGRRSNILQKVALSVVSNQVCQAWYQSE 281
           G+L +  Q           VAGWG T    P     S+ LQ+V L ++  Q C  +   +
Sbjct: 106 GTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPG----SDTLQEVKLRLMDPQACSHFRDFD 161
Query: 282 GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
                    Q+C G+ +  K A                               + DSGGP
Sbjct: 162 ------HNLQLCVGNPRKTKSA------------------------------FKGDSGGP 185
Query: 342 LMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           L+  GA      G+VS G   A+P  P ++TR++ Y  WI+  L
Sbjct: 186 LLCAGAAQ----GIVSYGRSDAKP--PAVFTRISHYQPWINQIL 223

>pdb|4GSO|A Chain A, Structure Of Jararacussin-I Length = 232

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 115/270 (42%), Gaps = 57/270 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG   +  E P++  L  HG +FCG T+I+++W+VTAAHC         ++   + L 
Sbjct: 1   VLGGDECDINEHPFLAFLYSHG-YFCGLTLINQEWVVTAAHC--------DSTNFQMQLG 51
Query: 177 EHD---LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H    L+    +  P  + +    +     + DI L++L + I  S  I P  LPS   
Sbjct: 52  VHSKKVLNEDEQTRNPKEKFICPNKNMSEVLDKDIMLIKLDKPISNSKHIAPLSLPSNPP 111
Query: 234 DYSEQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             S  SV  + GWG     P++    ++     +++V  +VCQ  Y     K     + +
Sbjct: 112 --SVGSVCRIMGWGSITI-PNE-TYPDVPYCANINLVDYEVCQGAYNGLPAK-----TTL 162
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG  +GGKD C                                DSGGPL+  G    Q 
Sbjct: 163 CAGVLEGGKDTCV------------------------------GDSGGPLICNG----QF 188
Query: 353 IGLVSTGI-GCARPRLPGLYTRLTRYIGWI 381
            G+VS G   C +   PG+YT +  Y  WI
Sbjct: 189 QGIVSYGAHSCGQGPKPGIYTNVFDYTDWI 218

>pdb|3MWI|U Chain U, The Complex Crystal Structure Of Urokianse And 5-Nitro-1h-Indole-2- Amidine Length = 246

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG++I   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+   LPS   D     S  + G+G   EN +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTIALPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1OWE|A Chain A, Substituted 2-Naphthamidine Inhibitors Of Urokinase Length = 245

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG+++   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+  CLPS   D     S  + G+G   E  +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTICLPSMYNDPQFGTSCEITGFG--KEQSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1W0Z|U Chain U, Urokinase Type Plasminogen Activator Length = 247

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG++I   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+   LPS   D     S  + G+G   EN +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTISLPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1EJN|A Chain A, Urokinase Plasminogen Activator B-Chain Inhibitor Complex Length = 253

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG++I   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+   LPS   D     S  + G+G   EN +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTISLPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1GJ7|B Chain B, Engineering Inhibitors Highly Selective For The S1 Sites Of Ser190 Trypsin-Like Serine Protease Drug Targets Length = 253

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG+++   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+  CLPS   D     S  + G+G   E  +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTICLPSMYNDPQFGTSCEITGFG--KEASTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1KLT|A Chain A, Crystal Structure Of Pmsf-Treated Human Chymase At 1.9 Angstroms Resolution Length = 226

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 64/278 (23%)
Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG  + P   P++  L+         FCGG +I   +++TAAHC        +   I 
Sbjct: 1   IIGGTESKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHC--------AGRSIT 52
Query: 173 VTLKEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H+++    +   + V++   HP ++ S+ ++DI LL+L      +  +     PS
Sbjct: 53  VTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPS 112
Query: 231 GSLDYSE--QSVTVAGWGWTNE-NPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
              ++    +   VAGWG T    P     S+ LQ+V L ++  Q C  +   +      
Sbjct: 113 -QFNFVPPGRMCRVAGWGRTGVLKPG----SDTLQEVKLRLMDPQACSHFRDFD------ 161
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
              Q+C G+ +  K A                               + DSGGPL+  G 
Sbjct: 162 HNLQLCVGNPRKTKSA------------------------------FKGDSGGPLLCAGV 191
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
                 G+VS G   A+P  P ++TR++ Y  WI+  L
Sbjct: 192 AQ----GIVSYGRSDAKP--PAVFTRISHYRPWINQIL 223

>pdb|1GI8|B Chain B, A Novel Serine Protease Inhibition Motif Involving A Multi- Centered Short Hydrogen Bonding Network At The Active Site Length = 245

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG+++   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+  CLPS   D     S  + G+G   E  +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTICLPSMYNDPQFGTSCEITGFG--KEASTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1KDQ|A Chain A, Crystal Structure Analysis Of The Mutant S189d Rat Chymotrypsin Length = 131

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IV G  A PG +PW VSL+ + G HFCGG++I E W+VTAAHC       + A + +   
Sbjct: 1   IVNGEDAIPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHCGVKTSDVVVAGEFDQGS 60
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
            E +     I  + + ++  +P  +  +  NDI LL+L    Q+S+ +    LP+   D+
Sbjct: 61  DEEN-----IQVLKIAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVSLPNVDDDF 115
Query: 236 SEQSV-TVAGWGWT 248
              +V    GWG T
Sbjct: 116 PPGTVCATTGWGKT 129

>pdb|1FV9|A Chain A, Crystal Structure Of Human Microurokinase In Complex With 2- Amino-5-Hydroxy-Benzimidazole Length = 245

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG+++   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+   LPS   D     S  + G+G   EN +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTIALPSMYNDPQFGTSCEITGFG--KENSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|4AFQ|A Chain A, Human Chymase - Fynomer Complex Length = 226

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 116/284 (40%), Gaps = 76/284 (26%)
Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG    P   P++  L+         FCGG +I   +++TAAHC        +   I 
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHC--------AGRSIT 52
Query: 173 VTLKEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H+++    +   + V++   HP ++ S+ ++DI LL+L      +       L  
Sbjct: 53  VTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLT-------LAV 105
Query: 231 GSLDYSEQ--------SVTVAGWGWTNE-NPSQGRRSNILQKVALSVVSNQVCQAWYQSE 281
           G+L +  Q           VAGWG T    P     S+ LQ+V L ++  Q C  +   +
Sbjct: 106 GTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPG----SDTLQEVKLRLMDPQACSHFRDFD 161
Query: 282 GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
                    Q+C G+ +  K A                               + DSGGP
Sbjct: 162 ------HNLQLCVGNPRKTKSA------------------------------FKGDSGGP 185
Query: 342 LMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           L+  G       G+VS G   A+P  P ++TR++ Y  WI+  L
Sbjct: 186 LLCAGVAQ----GIVSYGRSDAKP--PAVFTRISHYRPWINQIL 223

>pdb|1AU8|A Chain A, Human Cathepsin G Length = 224

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 59/275 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  + P   P++  L+     G   CGG ++ E +++TAAHC          S INV
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW--------GSNINV 52
Query: 174 TLKEHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           TL  H++ R   +   +   R + HP ++  +  NDI LL+L+R ++ +  + P  LP  
Sbjct: 53  TLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRA 112
Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                  ++ TVAGWG      S  R ++ L++V L V  ++ C   + S   +      
Sbjct: 113 QEGLRPGTLCTVAGWGRV----SMRRGTDTLREVQLRVQRDRQCLRIFGSYDPR-----R 163
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           Q+C G  +  K A                               + DSGGPL+     + 
Sbjct: 164 QICVGDRRERKAA------------------------------FKGDSGGPLLC----NN 189
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              G+VS G     P  P ++TR++ ++ WI  T+
Sbjct: 190 VAHGIVSYGKSSGVP--PEVFTRVSSFLPWIRTTM 222

>pdb|1KYN|B Chain B, Cathepsin-G Length = 235

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 59/275 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  + P   P++  L+     G   CGG ++ E +++TAAHC          S INV
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW--------GSNINV 52
Query: 174 TLKEHDLSRPSIST--VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           TL  H++ R   +   +   R + HP ++  +  NDI LL+L+R ++ +  + P  LP  
Sbjct: 53  TLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRA 112
Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                  ++ TVAGWG      S  R ++ L++V L V  ++ C   + S   +      
Sbjct: 113 QEGLRPGTLCTVAGWGRV----SMRRGTDTLREVQLRVQRDRQCLRIFGSYDPR-----R 163
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           Q+C G  +  K A                               + DSGGPL+     + 
Sbjct: 164 QICVGDRRERKAA------------------------------FKGDSGGPLLC----NN 189
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              G+VS G     P  P ++TR++ ++ WI  T+
Sbjct: 190 VAHGIVSYGKSSGVP--PEVFTRVSSFLPWIRTTM 222

>pdb|2JET|B Chain B, Crystal Structure Of A Trypsin-Like Mutant (S189d, A226g) Chymotrypsin Length = 128

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 120 GLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
           G  A PG +PW VSL+ + G HFCGG++I E W+VTAAHC       + A + +    E 
Sbjct: 1   GEDAIPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHCGVKTSDVVVAGEFDQGSDEE 60
Query: 179 DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQ 238
           +     I  + + ++  +P  +  +  NDI LL+L    Q+S+ +   CLP+   D+   
Sbjct: 61  N-----IQVLKIAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVCLPNVDDDFPPG 115
Query: 239 SV-TVAGWGWT 248
           +V    GWG T
Sbjct: 116 TVCATTGWGKT 126

>pdb|1HYL|A Chain A, The 1.8 A Structure Of Collagenase From Hypoderma Lineatum Length = 230

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 61/274 (22%)
Query: 117 IVGGLAANPGEFPW----IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+ G  A  G FP+     ++L+     +CGG++I  +WI+TAAHC+ +  S        
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAVSV------- 53
Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG- 231
           V      +     + V   RI+ H   +  ++ ND+AL+++   ++++D I+P  LPSG 
Sbjct: 54  VVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIPH-VEYTDNIQPIRLPSGE 112
Query: 232 SLDYSEQSV--TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            L+   +++  TV+GWG +N +      + ILQ     V+ N  C   Y        + E
Sbjct: 113 ELNNKFENIWATVSGWGQSNTD------TVILQYTYNLVIDNDRCAQEYPPG----IIVE 162
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           S +C G    GK  C+                               DSGGP +L  ++ 
Sbjct: 163 STIC-GDTSDGKSPCF------------------------------GDSGGPFVL--SDK 189
Query: 350 TQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWI 381
             +IG+VS  +G GC   + P  ++R+T Y+ WI
Sbjct: 190 NLLIGVVSFVSGAGCESGK-PVGFSRVTSYMDWI 222

>pdb|2NWN|A Chain A, New Pharmacophore For Serine Protease Inhibition Revealed By Crystal Structure Of Human Urokinase-Type Plasminogen Activator Complexed With A Cyclic Peptidyl Inhibitor, Upain-1 Length = 253

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 117/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG++I   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+   LPS   D     S  + G+G   E  +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTIALPSMYNDPQFGTSCEITGFG--KEQSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|4FU7|A Chain A, Crystal Structure Of The Urokinase Length = 246

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 117/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG++I   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+   LPS   D     S  + G+G   E  +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTIALPSMYNDPQFGTSCEITGFG--KEQSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           DSGGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|4E7N|A Chain A, Crystal Structure Of Ahv_tl-I, A Glycosylated Snake-Venom Thrombin- Like Enzyme From Agkistrodon Halys Length = 238

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 55/276 (19%)
Query: 117 IVGGLAANPGEFPWIVSL--KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           I+GG   N  E  ++V+L   R    FCGGT+I+++W++TAAHC              + 
Sbjct: 1   IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHC--------DRKNFRIK 52
Query: 175 LKEHDLSRPSI---STVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           L  H    P+    + VP  +     S + + ++ DI L+ L   ++ S  I  A     
Sbjct: 53  LGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHI--APFSLP 110
Query: 232 SLDYSEQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
           S   S  SV  + GWG    +P++G   ++   V ++++  ++C+A Y     ++     
Sbjct: 111 SSPPSVGSVCRIMGWGRI--SPTEGTYPDVPHCVNINLLEYEMCRAPYPE--FELPATSR 166
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG  +GGKD C                              + DSGGPL+  G    
Sbjct: 167 TLCAGILEGGKDTC------------------------------KGDSGGPLICNG---- 192
Query: 351 QVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           Q  G+ S G   CA+P  P  YT++  ++ WI + +
Sbjct: 193 QFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENII 228

>pdb|1BQY|A Chain A, Plasminogen Activator (tsv-pa) From Snake Venom Length = 234

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 111/271 (40%), Gaps = 49/271 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           + GG   N  E   +V L    G  CGGT+I++ W+VTAAHC  N    L        L 
Sbjct: 1   VFGGDECNINEHRSLVVLFNSNGFLCGGTLINQDWVVTAAHCDSNNFQLLFGVHSKKILN 60
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
           E + +R      P  +            + DI L++L  S+  S+ I  A L   S   S
Sbjct: 61  EDEQTRD-----PKEKFFCPNRKKDDEVDKDIMLIKLDSSVSNSEHI--APLSLPSSPPS 113
Query: 237 EQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
             SV  + GWG T   P++    ++     ++++ + VC+  Y        V  + +CAG
Sbjct: 114 VGSVCRIMGWGKT--IPTKEIYPDVPHCANINILDHAVCRTAYSWR----QVANTTLCAG 167
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
             QGG+D C                                DSGGPL+  G       G+
Sbjct: 168 ILQGGRDTC------------------------------HFDSGGPLICNGIFQ----GI 193
Query: 356 VS-TGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS  G  C +P  PG+YT++  Y+ WI   +
Sbjct: 194 VSWGGHPCGQPGEPGVYTKVFDYLDWIKSII 224

>pdb|1ELV|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Complement C1s Protease Length = 333

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 119/298 (39%), Gaps = 52/298 (17%)
Query: 99  PIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHC 158
           P+ GVP  R     +  +I+GG  A+   FPW V        + GG +I+E W++TAAH 
Sbjct: 68  PVCGVP--REPFEEKQ-RIIGGSDADIKNFPWQVFFDNP---WAGGALINEYWVLTAAHV 121
Query: 159 LCNGPSPL-----SASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLEL 213
           +     P      ++ Q +   K   L+   +   P  +++  P    ++F+NDIAL+ L
Sbjct: 122 VEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGR-TNFDNDIALVRL 180
Query: 214 TRSIQWSDLIRPACLPSGSLDYSEQSVT---VAGWGWTNENPSQGRRSNILQKVALSVVS 270
              ++    + P CLP  S DY+        ++GWG T +     R       VA     
Sbjct: 181 KDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKC 240
Query: 271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHW 330
            +V      ++ +      + +CAG E+ G D+C                          
Sbjct: 241 KEVKVEKPTADAEAYVFTPNMICAGGEK-GMDSC-------------------------- 273
Query: 331 DPPLQADSGGPLMLLGAESTQVI---GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
               + DSGG   +            GLVS G  C      GLYTR+  Y+ WI  T+
Sbjct: 274 ----KGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG---TYGLYTRVKNYVDWIMKTM 324

>pdb|2O8U|A Chain A, Crystal Structure And Binding Epitopes Of Urokinase-Type Plasminogen Activator (C122aN145QS195A) IN COMPLEX WITH Inhibitors Length = 253

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 64/285 (22%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSP------ 165
           I+GG        PW  ++ +RH G    + CGG++I   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 166 LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSF--NNDIALLELT----RSIQW 219
           L  S++N   +             V  ++ H  +S  +   +NDIALL++     R  Q 
Sbjct: 61  LGRSRLNSNTQGE-------MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 113
Query: 220 SDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA-- 276
           S  I+   LPS   D     S  + G+G   E  +       L+   + ++S++ CQ   
Sbjct: 114 SRTIQTIALPSMYNDPQFGTSCEITGFG--KEQSTDYLYPEQLKMTVVKLISHRECQQPH 171
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           +Y SE     V    +CA   Q   D+C                              Q 
Sbjct: 172 YYGSE-----VTTKMLCAADPQWKTDSC------------------------------QG 196
Query: 337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
           D+GGPL+        + G+VS G GCA    PG+YTR++ ++ WI
Sbjct: 197 DAGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 241

>pdb|1FUJ|A Chain A, Pr3 (Myeloblastin) Length = 221

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 67/278 (24%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A P   P++ SL+  G    HFCGGT+IH  +++TAAHCL + P  L    +NV
Sbjct: 1   IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRL----VNV 56
Query: 174 TLKEHDL--SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
            L  H++    P+     V ++  + ++   +  NDI L++L+     S  +    LP  
Sbjct: 57  VLGAHNVRTQEPTQQHFSVAQVFLN-NYDAENKLNDILLIQLSSPANLSASVATVQLPQQ 115
Query: 232 SLDYSEQSVTVA-GWGWT--NENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
                  +  +A GWG    ++ P+Q     +LQ++ ++VV+                 +
Sbjct: 116 DQPVPHGTQCLAMGWGRVGAHDPPAQ-----VLQELNVTVVT--------------FFCR 156
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
              +C                            P  ++G+ +      DSGGPL+  G  
Sbjct: 157 PHNICT-------------------------FVPRRKAGICF-----GDSGGPLICDGI- 185
Query: 349 STQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
              + G+ S  I GCA    P  +TR+  Y+ WI  TL
Sbjct: 186 ---IQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220

>pdb|3RP2|A Chain A, The Structure Of Rat Mast Cell Protease Ii At 1.9-Angstroms Resolution Length = 224

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 64/279 (22%)
Query: 117 IVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG+ + P   P++  L    ++     CGG +I  Q+++TAAHC           +I 
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHC--------KGREIT 52
Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           V L  HD+ +   +   + V + + H S++     +DI LL+L + ++ +  +    LPS
Sbjct: 53  VILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPS 112
Query: 231 GSLDYSEQSVT--VAGWGWTN-ENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
            S D+         AGWG T   +P+    S  L++V L ++  + C  +   E K    
Sbjct: 113 PS-DFIHPGAMCWAAGWGKTGVRDPT----SYTLREVELRIMDEKACVDYRYYEYK---- 163
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
              Q+C G                +P   R                   DSGGPL+  G 
Sbjct: 164 --FQVCVG----------------SPTTLRAA--------------FMGDSGGPLLCAGV 191
Query: 348 ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                 G+VS G   A+P  P ++TR++ Y+ WI+  ++
Sbjct: 192 AH----GIVSYGHPDAKP--PAIFTRVSTYVPWINAVIN 224

>pdb|1OP0|A Chain A, Crystal Structure Of Aav-sp-i, A Glycosylated Snake Venom Serine Proteinase From Agkistrodon Acutus Length = 234

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 55/270 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG   +  E  ++V+     G FCGGT+I+ +W+VTAAHC         ++   + L 
Sbjct: 1   VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHC--------DSTDFQMQLG 52
Query: 177 EHD---LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H    L+    +  P  + +    ++    + DI L++L + I  S  I  A L   S 
Sbjct: 53  VHSKKVLNEDEQTRNPKEKFICPNKNNNEVLDKDIMLIKLDKPISNSKHI--APLSLPSS 110
Query: 234 DYSEQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             S  SV  + GWG     P +    ++     ++++ + VCQA Y     ++  +   +
Sbjct: 111 PPSVGSVCRIMGWGSI--TPVKETFPDVPYCANINLLDHAVCQAGY----PELLAEYRTL 164
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG  QGGKD C                                DSGGPL+  G    Q 
Sbjct: 165 CAGIVQGGKDTCG------------------------------GDSGGPLICNG----QF 190
Query: 353 IGLVSTGIG-CARPRLPGLYTRLTRYIGWI 381
            G+VS G   C +   PG+YT +  Y  WI
Sbjct: 191 QGIVSYGAHPCGQGPKPGIYTNVFDYTDWI 220

>pdb|1OP2|A Chain A, Crystal Structure Of Aav-Sp-Ii, A Glycosylated Snake Venom Serine Proteinase From Agkistrodon Acutus Length = 234

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 55/270 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG   +  E  ++V+     G FCGGT+I+ +W+VTAAHC         ++   + L 
Sbjct: 1   VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHC--------DSTNFQMQLG 52
Query: 177 EHD---LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H    L+    +  P  + +    ++    + DI L++L + I  S  I  A L   S 
Sbjct: 53  VHSKKVLNEDEQTRNPKEKFICPNKNNNEVLDKDIMLIKLDKPISNSKHI--APLSLPSS 110
Query: 234 DYSEQSVT-VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             S  SV  + GWG     P +    ++     ++++ + VCQA Y     ++  +   +
Sbjct: 111 PPSVGSVCRIMGWGSI--TPVKETFPDVPYCANINLLDHAVCQAGY----PELLAEYRTL 164
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG  QGGKD C                                DSGGPL+  G    Q 
Sbjct: 165 CAGIVQGGKDTCG------------------------------GDSGGPLICNG----QF 190
Query: 353 IGLVSTGIG-CARPRLPGLYTRLTRYIGWI 381
            G+VS G   C +   PG+YT +  Y  WI
Sbjct: 191 QGIVSYGAHPCGQGPKPGIYTNVFDYTDWI 220

>pdb|1BBR|H Chain H, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 150

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     +   + 
Sbjct: 1   IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R    +  + +L +I  HP ++   + + DIALL+L R I+ SD I P CL
Sbjct: 61  VRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWG 246
           P    +  L ++     V GWG
Sbjct: 121 PDKQTAAKLLHAGFKGRVTGWG 142

>pdb|1BHX|B Chain B, X-Ray Structure Of The Complex Of Human Alpha Thrombin With The Inhibitor Sdz 229-357 Length = 147

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR--PSISTVPVL-RIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +I  + +L +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWG 246
           P    + SL  +     V GWG
Sbjct: 121 PDRETAASLLQAGYKGRVTGWG 142

>pdb|1AKS|A Chain A, Crystal Structure Of The First Active Autolysate Form Of The Porcine Alpha Trypsin Length = 125

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S+I V L 
Sbjct: 1   IVGGYTCAANSIPYQVSLNS-GSHFCGGSLINSQWVVSAAHCY--------KSRIQVRLG 51
Query: 177 EH--DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH  D+   +   +   +I+ HP+ + ++ +NDI L++L+     +  +    LP  S  
Sbjct: 52  EHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-SCA 110
Query: 235 YSEQSVTVAGWGWT 248
            +     ++GWG T
Sbjct: 111 AAGTECLISGWGNT 124

>pdb|4F4O|C Chain C, Structure Of The Haptoglobin-Haemoglobin Complex Length = 347

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 38/210 (18%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNG-PSPLSASQINVT 174
           +I+GG     G FPW   +  H     G T+I+EQW++T A  L  G  +   A  I  T
Sbjct: 102 RIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIAPT 161
Query: 175 LKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           L+   L       V + +++FHP +S      DI L++L + +  ++ + P CLPS   D
Sbjct: 162 LR---LYVGKKQEVEIEKVIFHPDNSTV----DIGLIKLKQKVPVNERVMPICLPSK--D 212
Query: 235 YSEQSVT--VAGWGWTNENPSQGRRSNI-----LQKVALSVVSNQVCQAWYQSE------ 281
           Y    +   V+GW         GR +N+     L+ V L V   + C  +Y+        
Sbjct: 213 YVNVGLVGYVSGW---------GRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKK 263
Query: 282 ------GKKINVKESQMCAGHEQGGKDACW 305
                 G +  + E   CAG  +  +D C+
Sbjct: 264 TPKSPVGVQPILNEHTFCAGLSKYQEDTCY 293

>pdb|1A7S|A Chain A, Atomic Resolution Structure Of Hbp Length = 225

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P +FP++ S++  G HFCGG +IH ++++TAA C  +    +S     V L 
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVST----VVLG 56
Query: 177 EHDLSRPSISTVPVLRI--MFHPSHSCSSFNNDIALLELTR--SIQWSDLIRPACLPSGS 232
            +DL R    +     I  M    +      ND+ LL+L R  ++  S  I P  L + +
Sbjct: 57  AYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNAT 116
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ 275
           ++   +   VAGWG      S GR S   + V ++V     C+
Sbjct: 117 VEAGTR-CQVAGWG---SQRSGGRLSRFPRFVNVTVTPEDQCR 155

>pdb|1FY3|A Chain A, [g175q]hbp, A Mutant Of Human Heparin Binding Protein (cap37) Length = 225

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P +FP++ S++  G HFCGG +IH ++++TAA C  +    +S     V L 
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVST----VVLG 56
Query: 177 EHDLSRPSISTVPVLRI--MFHPSHSCSSFNNDIALLELTR--SIQWSDLIRPACLPSGS 232
            +DL R    +     I  M    +      ND+ LL+L R  ++  S  I P  L + +
Sbjct: 57  AYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNAT 116
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ 275
           ++   +   VAGWG      S GR S   + V ++V     C+
Sbjct: 117 VEAGTR-CQVAGWG---SQRSGGRLSRFPRFVNVTVTPEDQCR 155

>pdb|1HNE|E Chain E, Structure Of Human Neutrophil Elastase In Complex With A Peptide Chloromethyl Ketone Inhibitor At 1.84-Angstroms Resolution Length = 218

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P  +P++VSL+  GGHFCG T+I   ++++AAHC+    + ++   + V L 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCV----ANVNVRAVRVVLG 56
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H+LSR  P+     V RI F   +   +  NDI +L+L  S   +  ++ A LP+    
Sbjct: 57  AHNLSRREPTRQVFAVQRI-FEDGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRR 115
Query: 235 YSEQSVTVA-GWGWTNENPSQGRRSNILQKVALSVVS 270
                  +A GWG    N      +++LQ++ ++VV+
Sbjct: 116 LGNGVQCLAMGWGLLGRNRGI---ASVLQELNVTVVT 149

>pdb|1PPG|E Chain E, The Refined 2.3 Angstroms Crystal Structure Of Human Leukocyte Elastase In A Complex With A Valine Chloromethyl Ketone Inhibitor Length = 218

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P  +P++VSL+  GGHFCG T+I   ++++AAHC+    + ++   + V L 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCV----ANVNVRAVRVVLG 56
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H+LSR  P+     V RI F   +   +  NDI +L+L  S   +  ++ A LP+    
Sbjct: 57  AHNLSRREPTRQVFAVQRI-FENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRR 115
Query: 235 YSEQSVTVA-GWGWTNENPSQGRRSNILQKVALSVVS 270
                  +A GWG    N      +++LQ++ ++VV+
Sbjct: 116 LGNGVQCLAMGWGLLGRNRGI---ASVLQELNVTVVT 149

>pdb|2RG3|A Chain A, Covalent Complex Structure Of Elastase Length = 218

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P  +P++VSL+  GGHFCG T+I   ++++AAHC+    + ++   + V L 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCV----ANVNVRAVRVVLG 56
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H+LSR  P+     V RI F   +   +  NDI +L+L  S   +  ++ A LP+    
Sbjct: 57  AHNLSRREPTRQVFAVQRI-FENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRR 115
Query: 235 YSEQSVTVA-GWGWTNENPSQGRRSNILQKVALSVVS 270
                  +A GWG    N      +++LQ++ ++VV+
Sbjct: 116 LGNGVQCLAMGWGLLGRNRGI---ASVLQELNVTVVT 149

>pdb|1PPF|E Chain E, X-Ray Crystal Structure Of The Complex Of Human Leukocyte Elastase (Pmn Elastase) And The Third Domain Of The Turkey Ovomucoid Inhibitor Length = 218

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P  +P++VSL+  GGHFCG T+I   ++++AAHC+    + ++   + V L 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCV----ANVNVRAVRVVLG 56
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H+LSR  P+     V RI F   +   +  NDI +L+L  S   +  ++ A LP+    
Sbjct: 57  AHNLSRREPTRQVFAVQRI-FENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRR 115
Query: 235 YSEQSVTVA-GWGWTNENPSQGRRSNILQKVALSVVS 270
                  +A GWG    N      +++LQ++ ++VV+
Sbjct: 116 LGNGVQCLAMGWGLLGRNRGI---ASVLQELNVTVVT 149

>pdb|1B0F|A Chain A, Crystal Structure Of Human Neutrophil Elastase With Mdl 101, 146 Length = 218

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P  +P++VSL+  GGHFCG T+I   ++++AAHC+    + ++   + V L 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLAGGHFCGATLIAPNFVMSAAHCV----ANVNVRAVRVVLG 56
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H+LSR  P+     V RI F   +   +  NDI +L+L  S   +  ++ A LP+    
Sbjct: 57  AHNLSRREPTRQVFAVQRI-FEDGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRR 115
Query: 235 YSEQSVTVA-GWGWTNENPSQGRRSNILQKVALSVVS 270
                  +A GWG    N      +++LQ++ ++VV+
Sbjct: 116 LGNGVQCLAMGWGLLGRNRGI---ASVLQELNVTVVT 149

>pdb|3S69|A Chain A, Crystal Structure Of Saxthrombin Length = 234

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 111/273 (40%), Gaps = 53/273 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG   N  E   +V+     G FC GT+I+E+W++TAAHC          +   + L 
Sbjct: 1   VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHC--------DNTNFQMKLG 52
Query: 177 EHD---LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H    L+    +  P  + +     +    + DI L++L   +  S+ I P  LPS   
Sbjct: 53  VHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSSPP 112
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
                   + GWG     P +    ++     ++++ + VCQA Y     ++  +   +C
Sbjct: 113 SVG-SVCHIMGWGSI--TPIKVTYPDVPYCAYINLLDDAVCQAGY----PELLTEYRTLC 165
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG  +GGKD C                                DSGGPL+  G    Q  
Sbjct: 166 AGILEGGKDTCG------------------------------GDSGGPLICNG----QFQ 191
Query: 354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           G+VS G   C +   PG+YT++  Y  WI   +
Sbjct: 192 GIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSII 224

>pdb|3S9A|A Chain A, Russell's Viper Venom Serine Proteinase, Rvv-V (Closed-Form) Length = 234

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 107/277 (38%), Gaps = 61/277 (22%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           +VGG   N  E P++V+L         C G +I+ +W++TAAHC            I + 
Sbjct: 1   VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHC--------DRRNIRIK 52
Query: 175 LKEHD---LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           L  H     +      VP  +     +   +  + DI L+ L R + +S  I P  LPS 
Sbjct: 53  LGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSR 112
Query: 232 SLDYSEQSVTVAGWGW--TNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
           S     +   + GWG   T   P     +NI       +V ++ C+  Y      +    
Sbjct: 113 SRGVGSR-CRIMGWGKISTTTYPDVPHCTNIF------IVKHKWCEPLYPW----VPADS 161
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
             +CAG  +GG+D C                                DSGGPL+  G   
Sbjct: 162 RTLCAGILKGGRDTC------------------------------HGDSGGPLICNG--- 188
Query: 350 TQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
            ++ G+V+ G   C +   P +YT++  Y  WI   +
Sbjct: 189 -EMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSII 224

>pdb|1FY1|A Chain A, [r23s,F25e]hbp, A Mutant Of Human Heparin Binding Protein (Cap37) Length = 225

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P +FP++ S++  G H CGG +IH ++++TAA C  +    +S     V L 
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGSHECGGALIHARFVMTAASCFQSQNPGVST----VVLG 56
Query: 177 EHDLSRPSISTVPVLRI--MFHPSHSCSSFNNDIALLELTR--SIQWSDLIRPACLPSGS 232
            +DL R    +     I  M    +      ND+ LL+L R  ++  S  I P  L + +
Sbjct: 57  AYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNAT 116
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ 275
           ++   +   VAGWG      S GR S   + V ++V     C+
Sbjct: 117 VEAGTR-CQVAGWGSQR---SGGRLSRFPRFVNVTVTPEDQCR 155

>pdb|2RDL|A Chain A, Hamster Chymase 2 Length = 226

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 113/283 (39%), Gaps = 74/283 (26%)
Query: 117 IVGGLAANPGEFPWIVSLK--RHGGHF--CGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG    P   P++  L+      H   C G +I   +++TAAHC        +   I 
Sbjct: 1   IIGGTECRPHARPYMAYLEIVTPENHLSACSGFLIRRNFVMTAAHC--------AGRSIT 52
Query: 173 VTLKEHD--LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           V L  H+  +   +   + V +   HP +      NDI LL+L      +       L  
Sbjct: 53  VLLGAHNKKVKEDTWQKLEVEKQFPHPKYDDRLVLNDIMLLKLKEKANLT-------LGV 105
Query: 231 GSLDYSEQSVTV--------AGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG 282
           G+L  S +S ++         GWG TN N      S+ LQ+V + ++  Q C+ +     
Sbjct: 106 GTLPISAKSNSIPPGRVCRAVGWGRTNVNEPP---SDTLQEVKMRILDPQACKHFEDFH- 161
Query: 283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL 342
                +E Q+C G+ +  ++                 VY             + DSGGPL
Sbjct: 162 -----QEPQLCVGNPKKIRN-----------------VY-------------KGDSGGPL 186
Query: 343 MLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +  G       G+ S  +  A+P  P ++TR++ Y  WI+  L
Sbjct: 187 LCAGIAQ----GIASYVLRNAKP--PSVFTRISHYRPWINKIL 223

>pdb|1GVZ|A Chain A, Prostate Specific Antigen (Psa) From Stallion Seminal Plasma Length = 237

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 108/280 (38%), Gaps = 56/280 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHF-CGGTIIHEQWIVTAAHCLCN------GPSPLSAS 169
           I+GG        PW V++  H GHF CGG ++H QW++TAAHC+ +      G   LS  
Sbjct: 1   IIGGWECEKHSKPWQVAV-YHQGHFQCGGVLVHPQWVLTAAHCMSDDYQIWLGRHNLSKD 59
Query: 170 QINVTLKE--HDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPAC 227
           +      +       P      + +    P    S   +D+ LL L +  + +D ++   
Sbjct: 60  EDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDIS---HDLMLLRLAQPARITDAVKILD 116
Query: 228 LPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
           LP+          T +GWG  +   ++G  S  LQ V L + SN+ C   Y  +     +
Sbjct: 117 LPTQEPKLGSTCYT-SGWGLISTFTNRG--SGTLQCVELRLQSNEKCARAYPEK-----M 168
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
            E  +CA H       C                                DSGG L+  G 
Sbjct: 169 TEFVLCATHRDDSGSICL------------------------------GDSGGALICDGV 198
Query: 348 ESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLD 386
                 G+ S G   CA      ++T++  +  WI +T++
Sbjct: 199 ----FQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIE 234

>pdb|3H7T|A Chain A, Crystal Structure Of Scabies Mite Inactivated Protease Paralogue S-D1 (Smipp-S-D1) Length = 235

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  ++  + PW V +      FCGG+I+   +++TAA C+ +G  P   S I+    
Sbjct: 1   IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCV-DGTKPSDIS-IHYGSS 58
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSD-LIRPACLPSGSLD- 234
                  S+    +  + +HP     +  N+ A++E    I+  D   +   LPS   D 
Sbjct: 59  YRTTKGTSVMAKKIYIVRYHP----LTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDP 114
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
             + SV V+GWG TN    +   S  L +   +VV  + C+  Y+       + +   CA
Sbjct: 115 EPDTSVLVSGWGSTNFKSLE--YSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCA 172
Query: 295 GHE 297
           G E
Sbjct: 173 GGE 175

>pdb|2KAI|B Chain B, Refined 2.5 Angstroms X-Ray Crystal Structure Of The Complex Formed By Porcine Kallikrein A And The Bovine Pancreatic Trypsin Inhibitor. Crystallization, Patterson Search, Structure Determination, Refinement, Structure And Comparison With Its Components And With The Bovine Trypsin- Pancreatic Trypsin Inhibitor Complex Length = 152

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 41/184 (22%)
Query: 203 SFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQ 262
            +++D+ LL L    + +D ++   LP+   +    +   +GWG     P      + +Q
Sbjct: 5   DYSHDLMLLRLQSPAKITDAVKVLELPTQEPELG-STCEASGWGSIEPGPDDFEFPDEIQ 63
Query: 263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYP 322
            V L+++ N  C     ++     V ES +CAG+  GGKD C                  
Sbjct: 64  CVQLTLLQNTFC-----ADAHPDKVTESMLCAGYLPGGKDTC------------------ 100
Query: 323 SHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWI 381
                         DSGGPL+  G       G+ S G   C     P +YT+L  Y+ WI
Sbjct: 101 ------------MGDSGGPLICNGMWQ----GITSWGHTPCGSANKPSIYTKLIFYLDWI 144
Query: 382 SDTL 385
            DT+
Sbjct: 145 DDTI 148

>pdb|1EPT|C Chain C, Refined 1.8 Angstroms Resolution Crystal Structure Of Porcine Epsilon-Trypsin Length = 98

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 39/126 (30%)
Query: 260 ILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGR 319
           +LQ +   V+SN  C++ Y  +     +  + +C G  QGGKD+C               
Sbjct: 9   LLQCLKAPVLSNSSCKSSYPGQ-----ITGNMICVGFLQGGKDSC--------------- 48
Query: 320 VYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIG 379
                          Q DSGGP++  G    Q+ G+VS G GCA+   PG+YT++  Y+ 
Sbjct: 49  ---------------QGDSGGPVVCNG----QLQGIVSWGYGCAQKNKPGVYTKVCNYVN 89
Query: 380 WISDTL 385
           WI  T+
Sbjct: 90  WIQQTI 95

>pdb|2ODP|A Chain A, Complement Component C2a, The Catalytic Fragment Of C3- And C5- Convertase Of Human Complement Length = 509

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 118 VGGLAANPGE---FPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           VG ++AN  +    PW V++K      C G +I +QW++TAAHC  +G +  S  ++NV 
Sbjct: 222 VGNMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDG-NDHSLWRVNVG 280
Query: 175 L------KEHDLSRPSISTVPVLRIMFHPSHSCSSF-NNDIALLELTRSIQWSDLIRPAC 227
                  KE  + +  IS  P   +    +     F  +DIALL+L + ++ S   RP C
Sbjct: 281 DPKSQWGKEFLIEKAVIS--PGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPIC 338
Query: 228 LP 229
           LP
Sbjct: 339 LP 340

>pdb|2I6Q|A Chain A, Complement Component C2a Length = 517

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 118 VGGLAANPGE---FPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           VG ++AN  +    PW V++K      C G +I +QW++TAAHC  +G +  S  ++NV 
Sbjct: 230 VGNMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDG-NDHSLWRVNVG 288
Query: 175 L------KEHDLSRPSISTVPVLRIMFHPSHSCSSF-NNDIALLELTRSIQWSDLIRPAC 227
                  KE  + +  IS  P   +    +     F  +DIALL+L + ++ S   RP C
Sbjct: 289 DPKSQWGKEFLIEKAVIS--PGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPIC 346
Query: 228 LP 229
           LP
Sbjct: 347 LP 348

>pdb|3H7O|A Chain A, Crystal Structure Of Scabies Mite Inactivated Protease Paralogue S-I1 (Smipp-S-I1) Length = 228

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 16/167 (9%)
Query: 119 GGLAANPGEFPWIVSLKRHGGH---FCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           GG   +  + PW V+++ + G     CGG I+ + +++TAAHC+ +         I +  
Sbjct: 2   GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQ----KPETIVIQY 57
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI-RPACLPSGSLD 234
           +  +L      + P +  ++   +   +  NDIA+LEL+R ++   L  +PA LP   ++
Sbjct: 58  ESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLP--DIE 115
Query: 235 YSEQS---VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
           +  ++   V V+G+G   +  +   + + L+   L+VV    C+  Y
Sbjct: 116 FRPKTGSDVLVSGYG---DGQTMDPKDHDLKSAQLTVVDLDECRTKY 159

>pdb|1UHB|B Chain B, Crystal Structure Of Porcine Alpha Trypsin Bound With Auto Catalyticaly Produced Native Peptide At 2.15 A Resolution Length = 98

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 39/127 (30%)
Query: 259 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARG 318
           ++LQ +   V+S+  C++ Y  +     +  + +C G  +GGKD+C              
Sbjct: 8   SLLQCLKAPVLSDSSCKSSYPGQ-----ITGNMICVGFLEGGKDSC-------------- 48
Query: 319 RVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYI 378
                           Q DSGGP++  G    Q+ G+VS G GCA+   PG+YT++  Y+
Sbjct: 49  ----------------QGDSGGPVVCNG----QLQGIVSWGYGCAQKNKPGVYTKVCNYV 88
Query: 379 GWISDTL 385
            WI  T+
Sbjct: 89  NWIQQTI 95

>pdb|2XWB|F Chain F, Crystal Structure Of Complement C3b In Complex With Factors B And D Length = 732

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 50/255 (19%)
Query: 129 PW---IVSLKRHGGH-FCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPS 184
           PW   I  ++   GH  C G ++ E +++TAAHC        S  +++V  ++ DL    
Sbjct: 460 PWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSI-KVSVGGEKRDLE--- 515
Query: 185 ISTVPVLRIMFHPSHSCSS---------FNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                +  ++FHP+++ +          ++ D+AL++L   +++   IRP CLP      
Sbjct: 516 -----IEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLP------ 564
Query: 236 SEQSVTVAGWGWTNENPSQGRR---SNILQKVALSVVSNQVCQAWYQS-EGKKINVKESQ 291
                         E  ++  R   +   Q+    ++  Q  +A + S E KK+  KE  
Sbjct: 565 ------------CTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVY 612
Query: 292 MCAGHEQGG--KDACWV---SRQWWTPHVARGRVYPSHRSGVHWDP-PLQADSGGPLMLL 345
           +  G ++G   +DA +     +      V   R   +     + DP   + DSGGPL++ 
Sbjct: 613 IKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVH 672
Query: 346 GAESTQVIGLVSTGI 360
                  +G++S G+
Sbjct: 673 KRSRFIQVGVISWGV 687

>pdb|3HRZ|D Chain D, Cobra Venom Factor (Cvf) In Complex With Human Factor B Length = 741

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 50/255 (19%)
Query: 129 PW---IVSLKRHGGH-FCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPS 184
           PW   I  ++   GH  C G ++ E +++TAAHC        S  +++V  ++ DL    
Sbjct: 469 PWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSI-KVSVGGEKRDLE--- 524
Query: 185 ISTVPVLRIMFHPSHSCSS---------FNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                +  ++FHP+++ +          ++ D+AL++L   +++   IRP CLP      
Sbjct: 525 -----IEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLP------ 573
Query: 236 SEQSVTVAGWGWTNENPSQGRR---SNILQKVALSVVSNQVCQAWYQS-EGKKINVKESQ 291
                         E  ++  R   +   Q+    ++  Q  +A + S E KK+  KE  
Sbjct: 574 ------------CTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVY 621
Query: 292 MCAGHEQGG--KDACWV---SRQWWTPHVARGRVYPSHRSGVHWDP-PLQADSGGPLMLL 345
           +  G ++G   +DA +     +      V   R   +     + DP   + DSGGPL++ 
Sbjct: 622 IKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVH 681
Query: 346 GAESTQVIGLVSTGI 360
                  +G++S G+
Sbjct: 682 KRSRFIQVGVISWGV 696

>pdb|2OK5|A Chain A, Human Complement Factor B Length = 752

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 50/255 (19%)
Query: 129 PW---IVSLKRHGGH-FCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPS 184
           PW   I  ++   GH  C G ++ E +++TAAHC        S  +++V  ++ DL    
Sbjct: 479 PWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSI-KVSVGGEKRDLE--- 534
Query: 185 ISTVPVLRIMFHPSHSCSS---------FNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                +  ++FHP+++ +          ++ D+AL++L   +++   IRP CLP      
Sbjct: 535 -----IEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLP------ 583
Query: 236 SEQSVTVAGWGWTNENPSQGRR---SNILQKVALSVVSNQVCQAWYQS-EGKKINVKESQ 291
                         E  ++  R   +   Q+    ++  Q  +A + S E KK+  KE  
Sbjct: 584 ------------CTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVY 631
Query: 292 MCAGHEQGG--KDACWV---SRQWWTPHVARGRVYPSHRSGVHWDP-PLQADSGGPLMLL 345
           +  G ++G   +DA +     +      V   R   +     + DP   + DSGGPL++ 
Sbjct: 632 IKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVH 691
Query: 346 GAESTQVIGLVSTGI 360
                  +G++S G+
Sbjct: 692 KRSRFIQVGVISWGV 706

>pdb|1RRK|A Chain A, Crystal Structure Analysis Of The Bb Segment Of Factor B Length = 497

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 46/242 (19%)
Query: 138 GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHP 197
           G   C G ++ E +++TAAHC        S  +++V  ++ DL         +  ++FHP
Sbjct: 240 GHESCMGAVVSEYFVLTAAHCFTVDDKEHSI-KVSVGGEKRDLE--------IEVVLFHP 290
Query: 198 SHSCSS---------FNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWT 248
           +++ +          ++ D+AL++L   +++   IRP CLP                   
Sbjct: 291 NYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPC------------------ 332
Query: 249 NENPSQGRR---SNILQKVALSVVSNQVCQAWYQS-EGKKINVKESQMCAGHEQGG--KD 302
            E  ++  R   +   Q+    ++  Q  +A + S E KK+  KE  +  G ++G   +D
Sbjct: 333 TEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERD 392
Query: 303 ACWV---SRQWWTPHVARGRVYPSHRSGVHWDP-PLQADSGGPLMLLGAESTQVIGLVST 358
           A +     +      V   R   +     + DP   + DSGGPL++        +G++S 
Sbjct: 393 AQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISW 452
Query: 359 GI 360
           G+
Sbjct: 453 GV 454

>pdb|2WIN|I Chain I, C3 Convertase (C3bbb) Stabilized By Scin Length = 507

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 46/242 (19%)
Query: 138 GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHP 197
           G   C G ++ E +++TAAHC        S  +++V  ++ DL         +  ++FHP
Sbjct: 248 GHESCMGAVVSEYFVLTAAHCFTVDDKEHSI-KVSVGGEKRDLE--------IEVVLFHP 298
Query: 198 SHSCSS---------FNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWT 248
           +++ +          ++ D+AL++L   +++   IRP CLP                   
Sbjct: 299 NYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLP------------------C 340
Query: 249 NENPSQGRR---SNILQKVALSVVSNQVCQAWYQS-EGKKINVKESQMCAGHEQGG--KD 302
            E  ++  R   +   Q+    ++  Q  +A + S E KK+  KE  +  G ++G   +D
Sbjct: 341 TEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERD 400
Query: 303 ACWV---SRQWWTPHVARGRVYPSHRSGVHWDPPL-QADSGGPLMLLGAESTQVIGLVST 358
           A +     +      V   R   +     + DP   + DSGGPL++        +G++S 
Sbjct: 401 AQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISW 460
Query: 359 GI 360
           G+
Sbjct: 461 GV 462

>pdb|1DLE|A Chain A, Factor B Serine Protease Domain Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 46/242 (19%)
Query: 138 GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHP 197
           G   C G ++ E +++TAAHC        S  +++V  ++ DL         +  ++FHP
Sbjct: 41  GHESCMGAVVSEYFVLTAAHCFTVDDKEHSI-KVSVGGEKRDLE--------IEVVLFHP 91
Query: 198 SHSCSS---------FNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWT 248
           +++ +          ++ D+AL++L   +++   IRP CLP                   
Sbjct: 92  NYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLP------------------C 133
Query: 249 NENPSQGRR---SNILQKVALSVVSNQVCQAWYQS-EGKKINVKESQMCAGHEQGG--KD 302
            E  ++  R   +   Q+    ++  Q  +A + S E KK+  KE  +  G ++G   +D
Sbjct: 134 TEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERD 193
Query: 303 ACWV---SRQWWTPHVARGRVYPSHRSGVHWDP-PLQADSGGPLMLLGAESTQVIGLVST 358
           A +     +      V   R   +     + DP   + DSGGPL++        +G++S 
Sbjct: 194 AQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISW 253
Query: 359 GI 360
           G+
Sbjct: 254 GV 255

>pdb|3F1S|B Chain B, Crystal Structure Of Protein Z Complexed With Protein Z-Dependent Inhibitor Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 122 AANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL 180
           A +  + PW V L    G  FCGG II E +++T A C        S    N+T+K +  
Sbjct: 58  APDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKC--------SLLHRNITVKTY-F 108
Query: 181 SRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQ 238
           +R S     + +  +  H  +   +  ND++LLEL   IQ      P C P    D++E 
Sbjct: 109 NRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEK--DFAEH 166

>pdb|3H5C|B Chain B, X-Ray Structure Of Protein Z-Protein Z Inhibitor Complex Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 122 AANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL 180
           A +  + PW V L    G  FCGG II E +++T A C        S    N+T+K +  
Sbjct: 99  APDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKC--------SLLHRNITVKTY-F 149
Query: 181 SRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQ 238
           +R S     + +  +  H  +   +  ND++LLEL   IQ      P C P    D++E 
Sbjct: 150 NRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEK--DFAEH 207

>pdb|1EPT|A Chain A, Refined 1.8 Angstroms Resolution Crystal Structure Of Porcine Epsilon-Trypsin Length = 43

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCL 159
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC 
Sbjct: 1   IVGGYTCAANSIPYQVSLNS-GSHFCGGSLINSQWVVSAAHCY 42

>pdb|2KAI|A Chain A, Refined 2.5 Angstroms X-Ray Crystal Structure Of The Complex Formed By Porcine Kallikrein A And The Bovine Pancreatic Trypsin Inhibitor. Crystallization, Patterson Search, Structure Determination, Refinement, Structure And Comparison With Its Components And With The Bovine Trypsin- Pancreatic Trypsin Inhibitor Complex Length = 80

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHC 158
           I+GG        PW V++  +    CGG +++ +W++TAAHC
Sbjct: 1   IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHC 42

>pdb|1BBR|E Chain E, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 109

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 40/135 (29%)
Query: 257 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQG-GK--DACWVSRQWWTP 313
           + ++LQ V L +V   VC+A       +I + ++  CAG++ G GK  DAC         
Sbjct: 6   QPSVLQVVNLPLVERPVCKA-----STRIRITDNMFCAGYKPGEGKRGDAC--------- 51
Query: 314 HVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLY 371
                                + DSGGP ++    + +   +G+VS G GC R    G Y
Sbjct: 52  ---------------------EGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFY 90
Query: 372 TRLTRYIGWISDTLD 386
           T + R   WI   +D
Sbjct: 91  THVFRLKKWIQKVID 105

>pdb|2HNT|C Chain C, Crystallographic Structure Of Human Gamma-Thrombin Length = 70

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGH--FCGGTIIHEQWIVTAAHCLCNGP--SPLSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSR 182
           V + +H  +R
Sbjct: 61  VRIGKHSRTR 70

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	388
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	3e-84
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	3e-20
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	3e-84
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	3e-17
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	4e-83
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	1e-16
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	4e-82
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	8e-18
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	4e-82
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	1e-16
1md8_A	329	C1R complement serine protease; innate immunity, a	8e-82
1md8_A	329	C1R complement serine protease; innate immunity, a	1e-18
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	1e-81
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	7e-16
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	4e-81
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	4e-16
1gpz_A	399	Complement C1R component; hydrolase, activation, i	6e-81
1gpz_A	399	Complement C1R component; hydrolase, activation, i	3e-18
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	8e-81
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	9e-16
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	3e-80
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	3e-16
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	3e-80
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	9e-16
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	5e-80
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	4e-16
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	9e-80
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	1e-18
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	1e-79
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	3e-15
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	2e-79
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	2e-15
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	4e-79
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	4e-15
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	5e-79
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	2e-16
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	6e-79
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	2e-16
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	7e-79
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	2e-15
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	1e-78
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	1e-14
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	1e-78
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	7e-16
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	3e-78
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	8e-16
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	4e-78
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	1e-15
1aut_C	250	Activated protein C; serine proteinase, plasma cal	5e-78
1aut_C	250	Activated protein C; serine proteinase, plasma cal	5e-15
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	6e-78
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	3e-14
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	1e-77
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	5e-13
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	1e-77
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	1e-15
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	1e-77
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	4e-18
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	7e-77
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	6e-14
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	1e-76
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	3e-13
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	1e-76
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	2e-15
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	7e-76
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	6e-17
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	1e-75
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	2e-14
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	3e-75
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	5e-15
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	3e-75
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	6e-14
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	6e-75
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	6e-14
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	6e-75
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	8e-15
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	6e-75
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	8e-15
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	7e-75
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	2e-14
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	7e-75
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	1e-14
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	2e-74
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	3e-12
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	2e-74
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	9e-15
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	1e-73
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	1e-16
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	2e-73
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	5e-14
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	2e-73
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	3e-16
2aiq_A	231	Protein C activator; snake venom serine proteinase	2e-73
2aiq_A	231	Protein C activator; snake venom serine proteinase	2e-14
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	3e-73
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	8e-12
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	8e-73
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	5e-13
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	9e-73
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	1e-12
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	4e-72
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	1e-13
1elv_A	333	Complement C1S component; trypsin-like serin prote	5e-72
1elv_A	333	Complement C1S component; trypsin-like serin prote	2e-14
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	6e-72
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	4e-15
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	7e-72
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	2e-14
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	2e-71
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	3e-14
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	2e-71
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	3e-14
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	3e-71
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	3e-16
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	4e-71
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	5e-14
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	7e-71
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	2e-14
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	7e-71
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	2e-13
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	8e-71
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	7e-14
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	1e-70
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	9e-14
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	1e-70
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	1e-12
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	4e-70
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	1e-14
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	5e-70
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	2e-13
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	5e-70
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	1e-12
1a7s_A	225	Heparin binding protein; serine protease homolog,	8e-70
1a7s_A	225	Heparin binding protein; serine protease homolog,	1e-11
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	8e-70
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	1e-14
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	2e-69
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	4e-09
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	3e-69
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	7e-13
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	4e-69
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	2e-14
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	6e-69
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	1e-15
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	2e-68
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	1e-14
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	2e-68
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	6e-15
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	4e-68
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	2e-14
2xrc_A	565	Human complement factor I; immune system, hydrolas	4e-68
2xrc_A	565	Human complement factor I; immune system, hydrolas	8e-12
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	8e-68
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	7e-14
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	1e-67
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	1e-12
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	2e-67
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	3e-14
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	3e-67
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	5e-15
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	4e-67
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	4e-12
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	3e-66
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	3e-13
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	8e-66
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	2e-11
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	2e-64
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	6e-09
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	3e-64
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	4e-11
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	1e-59
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	2e-08
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	3e-59
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	9e-14
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	2e-56
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	8e-10
3hrz_D	741	Complement factor B; serine protease, glycosilated	1e-47
3hrz_D	741	Complement factor B; serine protease, glycosilated	1e-08
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	2e-41
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	8e-40
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	7e-15
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	3e-26
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	7e-17
2pka_A	80	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	6e-24
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	1e-13
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	1e-04
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	2e-04
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	2e-04

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score =  257 bits (658), Expect = 3e-84
 Identities = 84/303 (27%), Positives = 129/303 (42%), Gaps = 62/303 (20%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGG-----HFCGGTIIHEQWIVTAAHCL 159
           CG  + + +   I+ G    P EFPW   +            CGG++I+ ++IVTAAHC+
Sbjct: 14  CGYQVEADK---ILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCV 70

Query: 160 CNGPSPLSASQINVTLKEHDLSR-------------PSISTVPVLRIMFHPSHSCSSFN- 205
                 +  +   V L E + +                   + +   + HP +   S + 
Sbjct: 71  AGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDR 130

Query: 206 -NDIALLELTRSIQWSDLIRPACLP-SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK 263
            +DIAL+ L R +++++ IRP CLP         Q +TV GWG T      G+ S I QK
Sbjct: 131 YHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRT----ETGQYSTIKQK 186

Query: 264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPS 323
           +A+ VV  + C   + + G ++    SQ+CAG E   KD+C                   
Sbjct: 187 LAVPVVHAEQCAKTFGAAGVRVR--SSQLCAGGE-KAKDSC------------------- 224

Query: 324 HRSGVHWDPPLQADSGGPLMLLGAEST-QVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
                        DSGGPL+   A     + GLVS G  C     PG+YT++ +Y  WI 
Sbjct: 225 -----------GGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIE 273

Query: 383 DTL 385
             +
Sbjct: 274 GNI 276

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score = 88.9 bits (221), Expect = 3e-20
 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           + S I QK+A+ VV  + C   + + G ++    SQ+CAG E   KD+C  DSGGPL+  
Sbjct: 179 QYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR--SSQLCAGGE-KAKDSCGGDSGGPLLAE 235

Query: 61  GAEST-QVIGLVSTGIG 76
            A     + GLVS G  
Sbjct: 236 RANQQFFLEGLVSFGAT 252

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score =  256 bits (655), Expect = 3e-84
 Identities = 78/275 (28%), Positives = 118/275 (42%), Gaps = 42/275 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG     GE PW V L  +G   CGGT+I+  W+V+AAHC     +      +   L 
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNW---RNLIAVLG 57

Query: 177 EHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EHDLS          V +++   ++   + N+DIALL L + +  +D + P CLP  +  
Sbjct: 58  EHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFS 117

Query: 235 YSE----QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                  +   V+GWG   +    G  +  L  + +  +  Q C    +  G   N+ E 
Sbjct: 118 ERTLAFVRFSLVSGWGQLLDR---GATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEY 174

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAG+  G KD+C                              + DSGGP       + 
Sbjct: 175 MFCAGYSDGSKDSC------------------------------KGDSGGPHATHYRGTW 204

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            + G+VS G GCA     G+YTR+++YI W+   +
Sbjct: 205 YLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLM 239

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 79.6 bits (197), Expect = 3e-17
 Identities = 23/74 (31%), Positives = 34/74 (45%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           +  L  + +  +  Q C    +  G   N+ E   CAG+  G KD+C  DSGGP      
Sbjct: 142 ALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYR 201

Query: 63  ESTQVIGLVSTGIG 76
            +  + G+VS G G
Sbjct: 202 GTWYLTGIVSWGQG 215

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score =  252 bits (646), Expect = 4e-83
 Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 43/273 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A  G +PW+V L       CG +++   W+V+AAHC+      L  S+    L 
Sbjct: 1   IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCV--YGRNLEPSKWTAILG 58

Query: 177 EHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H  S    P      +  I+ +P ++    +NDIA++ L   + ++D I+P  LP  + 
Sbjct: 59  LHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQ 118

Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            +   ++ ++AGWG        G  ++ILQ+  + ++SN+ CQ          N+ E+ +
Sbjct: 119 VFPPGRNCSIAGWGTVVYQ---GTTADILQEADVPLLSNERCQQQMPEY----NITENMI 171

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+E+GG D+C                              Q DSGGPLM        +
Sbjct: 172 CAGYEEGGIDSC------------------------------QGDSGGPLMCQENNRWFL 201

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+ S G  CA P  PG+Y R++R+  WI   L
Sbjct: 202 AGVTSFGYECALPNRPGVYARVSRFTEWIQSFL 234

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           ++ILQ+  + ++SN+ CQ          N+ E+ +CAG+E+GG D+C  DSGGPLM    
Sbjct: 141 ADILQEADVPLLSNERCQQQMPEY----NITENMICAGYEEGGIDSCQGDSGGPLMCQEN 196

Query: 63  ESTQVIGLVSTGIG 76
               + G+ S G  
Sbjct: 197 NRWFLAGVTSFGYE 210

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score =  255 bits (653), Expect = 4e-82
 Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 52/299 (17%)

Query: 105 CGRSLASRRTGKIVGGL-AANPGEFPWIVSLKRHG--------GHFCGGTIIHEQWIVTA 155
           CG         KI G    A  GEFPW+V++ +             CGG++I    ++T 
Sbjct: 118 CGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTG 177

Query: 156 AHCLCNGPSPLSASQINVTLKEHDLSRPSIS----TVPVLRIMFHPSHSCSSFNNDIALL 211
           AHC+ +  S  +   I +   E D              + +++ H + +  +  ND+ALL
Sbjct: 178 AHCVNSYQS--NLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALL 235

Query: 212 ELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN 271
            L R +  +D I   CLP  S  +       +GWG      S+ R SNIL+K+ L  V  
Sbjct: 236 LLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFG-SRHRYSNILKKIQLPTVDR 294

Query: 272 QVCQAWYQS--EGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVH 329
             CQA  ++   G K  + ++ +CAG E  GKD C                         
Sbjct: 295 DKCQADLRNTRLGLKFVLDQTFVCAGGE-QGKDTC------------------------- 328

Query: 330 WDPPLQADSGGPLMLLGAEST---QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
                  D G PL      +      +G+V+ GIGC    +PG+Y  +  +  WI   +
Sbjct: 329 -----TGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQEM 382

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score = 83.3 bits (206), Expect = 8e-18
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 6/79 (7%)

Query: 3   SNILQKVALSVVSNQVCQAWYQS--EGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           SNIL+K+ L  V    CQA  ++   G K  + ++ +CAG E  GKD C  D G PL   
Sbjct: 281 SNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGE-QGKDTCTGDGGSPLFCP 339

Query: 61  GAEST---QVIGLVSTGIG 76
              +      +G+V+ GIG
Sbjct: 340 DPRNPSRYMQMGIVAWGIG 358

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score =  249 bits (639), Expect = 4e-82
 Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 45/271 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKR----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           IVGG  A  GEFP+ +S +        HFCG +I +E + +TA HC   G    + S + 
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHC-VYGDDYENPSGLQ 59

Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           +   E D+S    S   + V +I+ H +   +  +NDI+LL+L+ S+ ++D + P  LP 
Sbjct: 60  IVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPE 119

Query: 231 GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                +   V V GWG T+E    G   ++LQKV + +VS++ C+A Y ++     + +S
Sbjct: 120 QG-HTATGDVIVTGWGTTSEG---GNTPDVLQKVTVPLVSDEDCRADYGAD----EILDS 171

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG  +GGKD+C                              Q DSGGPL      ST
Sbjct: 172 MICAGVPEGGKDSC------------------------------QGDSGGPLAASDTGST 201

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
            + G+VS G GCARP  PG+YT ++ ++ WI
Sbjct: 202 YLAGIVSWGYGCARPGYPGVYTEVSYHVDWI 232

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            ++LQKV + +VS++ C+A Y ++     + +S +CAG  +GGKD+C  DSGGPL     
Sbjct: 143 PDVLQKVTVPLVSDEDCRADYGAD----EILDSMICAGVPEGGKDSCQGDSGGPLAASDT 198

Query: 63  ESTQVIGLVSTGIG 76
            ST + G+VS G G
Sbjct: 199 GSTYLAGIVSWGYG 212

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score =  252 bits (646), Expect = 8e-82
 Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 48/292 (16%)

Query: 104 PCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNG 162
            CG+ +    +  +I+GG  A  G FPW V    H     GG ++ ++WI+TAAH L   
Sbjct: 76  VCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPK 133

Query: 163 PSP-LSASQINVTLKEHDLSR-PSISTVPVLRIMFHPSHSCS---SFNNDIALLELTRSI 217
                S + ++V L   ++     +   P+ R+  HP +      +F  DIALLEL  S+
Sbjct: 134 EHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSV 193

Query: 218 QWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA 276
                + P CLP     Y       V+G+G   E  +     + L+ V L V + Q C+ 
Sbjct: 194 TLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIA-----HDLRFVRLPVANPQACEN 248

Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
           W + + +     ++  CAGH    +DAC                              Q 
Sbjct: 249 WLRGKNRMDVFSQNMFCAGHPSLKQDAC------------------------------QG 278

Query: 337 DSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           DSGG   +    + +    G+VS GIGC+R    G YT++  Y+ WI   ++
Sbjct: 279 DSGGVFAVRDPNTDRWVATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEME 328

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 85.2 bits (211), Expect = 1e-18
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           ++ L+ V L V + Q C+ W + + +     ++  CAGH    +DAC  DSGG   +   
Sbjct: 230 AHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDP 289

Query: 63  ESTQ--VIGLVSTGIG 76
            + +    G+VS GIG
Sbjct: 290 NTDRWVATGIVSWGIG 305

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score =  254 bits (651), Expect = 1e-81
 Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 47/305 (15%)

Query: 89  TLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIH 148
               +   S P+    CG S A    G+I GG  A PG+FPW V +   GG    G +++
Sbjct: 135 WTSSKGEKSLPVCEPVCGLS-ARTTGGQIYGGQKAKPGDFPWQVLI--LGGTTAAGALLY 191

Query: 149 EQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSC-SSFNND 207
           + W++TAAH +        AS +++ +       P  +      +  H  ++  + F+ND
Sbjct: 192 DNWVLTAAHAV--YEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDND 249

Query: 208 IALLELTRSIQWSDLIRPACLPSGSLDY---SEQSVTVAGWGWTNENPSQGRRSNILQKV 264
           IAL++L   +  +  I P CLP    +    ++   T +GWG T      G  +  L  V
Sbjct: 250 IALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQR----GFLARNLMYV 305

Query: 265 ALSVVSNQVCQAWYQS-EGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPS 323
            + +V +Q C A Y+     + +V  + +CAG E GGKD+C                   
Sbjct: 306 DIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC------------------- 346

Query: 324 HRSGVHWDPPLQADSGGPLMLLGAESTQ--VIGLVSTG-IGCARPRLPGLYTRLTRYIGW 380
                      + DSGG L+ L +E+ +  V G+VS G + C      G+YT++  YI W
Sbjct: 347 -----------RGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPW 395

Query: 381 ISDTL 385
           I + +
Sbjct: 396 IENII 400

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 77.5 bits (191), Expect = 7e-16
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 3   SNILQKVALSVVSNQVCQAWYQS-EGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG 61
           +  L  V + +V +Q C A Y+     + +V  + +CAG E GGKD+C  DSGG L+ L 
Sbjct: 299 ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLD 358

Query: 62  AESTQ--VIGLVS 72
           +E+ +  V G+VS
Sbjct: 359 SETERWFVGGIVS 371

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score =  247 bits (633), Expect = 4e-81
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 46/277 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I GG  A PG+FPW V +   GG    G ++++ W++TAAH +        AS +++ + 
Sbjct: 1   IYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAV--YEQKHDASALDIRMG 56

Query: 177 EHDLSRPSISTVPVLRIMFHPS-HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
                 P  +      +  H      + F+NDIAL++L   +  +  I P CLP    + 
Sbjct: 57  TLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAES 116

Query: 236 ---SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK-KINVKESQ 291
              ++   T +GWG T         +  L  V + +V +Q C A Y+     + +V  + 
Sbjct: 117 FMRTDDIGTASGWGLTQRGFL----ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANM 172

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG E GGKD+C                              + DSGG L+ L +E+ +
Sbjct: 173 LCAGLESGGKDSC------------------------------RGDSGGALVFLDSETER 202

Query: 352 --VIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
             V G+VS G + C      G+YT++  YI WI + +
Sbjct: 203 WFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 239

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 76.1 bits (188), Expect = 4e-16
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGK-KINVKESQMCAGHEQGGKDACWADSGGPLMLLG 61
           +  L  V + +V +Q C A Y+     + +V  + +CAG E GGKD+C  DSGG L+ L 
Sbjct: 138 ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLD 197

Query: 62  AESTQ--VIGLVS 72
           +E+ +  V G+VS
Sbjct: 198 SETERWFVGGIVS 210

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score =  252 bits (645), Expect = 6e-81
 Identities = 81/305 (26%), Positives = 127/305 (41%), Gaps = 48/305 (15%)

Query: 91  DLEVGGSSPIAGVPCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHE 149
           + + G   P     CG+ +    +  +I+GG  A  G FPW V    H     GG ++ +
Sbjct: 131 NEQKGEKIPRCLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGD 188

Query: 150 QWIVTAAHCLCNGPSP-LSASQINVTLKEHDLSR-PSISTVPVLRIMFHPSHSCSS---F 204
           +WI+TAAH L        S + ++V L   ++     +   P+ R+  HP +       F
Sbjct: 189 RWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNF 248

Query: 205 NNDIALLELTRSIQWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQK 263
             DIALLEL  S+     + P CLP     Y       V+G+G   E  +     + L+ 
Sbjct: 249 EGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIA-----HDLRF 303

Query: 264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPS 323
           V L V + Q C+ W + + +     ++  CAGH    +DAC                   
Sbjct: 304 VRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC------------------- 344

Query: 324 HRSGVHWDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
                      Q DSGG   +    + +    G+VS GIGC+R    G YT++  Y+ WI
Sbjct: 345 -----------QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRG--YGFYTKVLNYVDWI 391

Query: 382 SDTLD 386
              ++
Sbjct: 392 KKEME 396

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 84.5 bits (209), Expect = 3e-18
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           + ++ L+ V L V + Q C+ W + + +     ++  CAGH    +DAC  DSGG   + 
Sbjct: 296 KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVR 355

Query: 61  GAESTQ--VIGLVSTGIG 76
              + +    G+VS GIG
Sbjct: 356 DPNTDRWVATGIVSWGIG 373

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score =  246 bits (631), Expect = 8e-81
 Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 51/275 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A PG+FPW V L      FCGG+I++E+WIVTAAHC+       +  +I V   
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCV------ETGVKITVVAG 54

Query: 177 EHDLSR--PSISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
           EH++     +     V+RI+ H +   + +++N+DIALLEL   +  +  + P C+    
Sbjct: 55  EHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKE 114

Query: 233 LD---YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
                    S  V+GWG        GR + +LQ + + +V    C    +       +  
Sbjct: 115 YTNIFLKFGSGYVSGWGRVFHK---GRSALVLQYLRVPLVDRATCLRSTKF-----TITN 166

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           +  CAG  +GG+D+C                              Q DSGGP +     +
Sbjct: 167 NMFCAGFHEGGRDSC------------------------------QGDSGGPHVTEVEGT 196

Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
           + + G++S G  CA     G+YT+++RY+ WI + 
Sbjct: 197 SFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 74.9 bits (185), Expect = 9e-16
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + +LQ + + +V    C    +       +  +  CAG  +GG+D+C  DSGGP +    
Sbjct: 140 ALVLQYLRVPLVDRATCLRSTKF-----TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVE 194

Query: 63  ESTQVIGLVSTGIG 76
            ++ + G++S G  
Sbjct: 195 GTSFLTGIISWGEE 208

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score =  245 bits (627), Expect = 3e-80
 Identities = 89/276 (32%), Positives = 128/276 (46%), Gaps = 46/276 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCL--CNGPSPLSASQINV 173
           +VGG  A+ GE+PW VSL   G  H CG ++I   W+V+AAHC     G      +Q   
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60

Query: 174 TLKEHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
            L  HD S+   P +    + RI+ HP  +  +F+ DIALLEL +  ++S ++RP  LP 
Sbjct: 61  FLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPD 120

Query: 231 GSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            S  +   +++ V GWG T      G  + ILQK  + V++   C+     +     +  
Sbjct: 121 ASHVFPAGKAIWVTGWGHTQYG---GTGALILQKGEIRVINQTTCENLLPQQ-----ITP 172

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
             MC G   GG D+C                              Q DSGGPL  + A+ 
Sbjct: 173 RMMCVGFLSGGVDSC------------------------------QGDSGGPLSSVEADG 202

Query: 350 T-QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
                G+VS G GCA+   PG+YTRL  +  WI + 
Sbjct: 203 RIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 76.5 bits (189), Expect = 3e-16
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + ILQK  + V++   C+     +     +    MC G   GG D+C  DSGGPL  + A
Sbjct: 146 ALILQKGEIRVINQTTCENLLPQQ-----ITPRMMCVGFLSGGVDSCQGDSGGPLSSVEA 200

Query: 63  EST-QVIGLVSTGIG 76
           +      G+VS G G
Sbjct: 201 DGRIFQAGVVSWGDG 215

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score =  245 bits (627), Expect = 3e-80
 Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 51/276 (18%)

Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW   L       FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54

Query: 176 KEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS--- 230
            + +  +         V  ++ H   +  +++ DIA+L L   I +   + PACLP    
Sbjct: 55  GDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDW 114

Query: 231 -GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
             S   ++++  V+G+G T+E    G +S  L+ + +  V    C+           + +
Sbjct: 115 AESTLMTQKTGIVSGFGRTHEK---GEQSTRLKMLEVPYVDRNSCKLSSSFI-----ITQ 166

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           +  CAG++   +DAC                              Q DSGGP +    ++
Sbjct: 167 NMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFKDT 196

Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             V G+VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 197 YFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 75.3 bits (186), Expect = 9e-16
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S  L+ + +  V    C+           + ++  CAG++   +DAC  DSGGP +    
Sbjct: 140 STRLKMLEVPYVDRNSCKLSSSFI-----ITQNMFCAGYDTKQEDACQGDSGGPHVTRFK 194

Query: 63  ESTQVIGLVSTGIG 76
           ++  V G+VS G G
Sbjct: 195 DTYFVTGIVSWGEG 208

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score =  244 bits (625), Expect = 5e-80
 Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 43/267 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG     GE+PW  SL+  G H CG T+I+  W+V+AAHC     +P   ++   +  
Sbjct: 1   IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNP---ARWTASFG 57

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
                +PS     + RI+ H  +   S + DI+L EL+  + +++ +   CLP  S ++ 
Sbjct: 58  VTI--KPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQ 115

Query: 237 E-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
               + V G+G    +   G   N L++  ++++    C            +    +CAG
Sbjct: 116 PGDVMFVTGFGALKND---GYSQNHLRQAQVTLIDATTCNEPQAYNDA---ITPRMLCAG 169

Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST-QVIG 354
             +G  DAC                              Q DSGGPL+   A     + G
Sbjct: 170 SLEGKTDAC------------------------------QGDSGGPLVSSDARDIWYLAG 199

Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWI 381
           +VS G  CA+P  PG+YTR+T    WI
Sbjct: 200 IVSWGDECAKPNKPGVYTRVTALRDWI 226

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 76.1 bits (188), Expect = 4e-16
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            N L++  ++++    C            +    +CAG  +G  DAC  DSGGPL+   A
Sbjct: 135 QNHLRQAQVTLIDATTCNEPQAYNDA---ITPRMLCAGSLEGKTDACQGDSGGPLVSSDA 191

Query: 63  EST-QVIGLVSTGIG 76
                + G+VS G  
Sbjct: 192 RDIWYLAGIVSWGDE 206

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score =  244 bits (624), Expect = 9e-80
 Identities = 77/278 (27%), Positives = 117/278 (42%), Gaps = 47/278 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
           I+GG  A  G FPW V    H     GG ++ ++WI+TAAH L        S + ++V L
Sbjct: 1   IIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58

Query: 176 KEHDLSRPS-ISTVPVLRIMFHPSHSCSS---FNNDIALLELTRSIQWSDLIRPACLPSG 231
              ++     +   P+ R+  HP +       F  DIALLEL  S+     + P CLP  
Sbjct: 59  GHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDN 118

Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
              Y       V+G+G   E  +     + L+ V L V + Q C+ W + + +     ++
Sbjct: 119 DTFYDLGLMGYVSGFGVMEEKIA-----HDLRFVRLPVANPQACENWLRGKNRMDVFSQN 173

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAGH    +DAC                              Q DSGG   +    + 
Sbjct: 174 MFCAGHPSLKQDAC------------------------------QGDSGGVFAVRDPNTD 203

Query: 351 Q--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           +    G+VS GIGC+R    G YT++  Y+ WI   ++
Sbjct: 204 RWVATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEME 239

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 83.5 bits (207), Expect = 1e-18
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           ++ L+ V L V + Q C+ W + + +     ++  CAGH    +DAC  DSGG   +   
Sbjct: 141 AHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDP 200

Query: 63  ESTQ--VIGLVSTGIG 76
            + +    G+VS GIG
Sbjct: 201 NTDRWVATGIVSWGIG 216

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score =  243 bits (623), Expect = 1e-79
 Identities = 82/276 (29%), Positives = 134/276 (48%), Gaps = 48/276 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRH--GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           IVGG+ A P EFPW VS++R     HFCGG+II+++W+V AAHC+       + + +++ 
Sbjct: 1   IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCM----QGEAPALVSLV 56

Query: 175 LKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
           + EHD S       T  V  I  + ++  ++  ND+++++   +I +   + P C P  +
Sbjct: 57  VGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPA 116

Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
            DY  +    +GWG  N          +L+ V L++ +N  C A Y S+     + +  +
Sbjct: 117 NDYVYRKSQCSGWGTINSGGVCC--PAVLRYVTLNITTNAFCDAVYTSD----TIYDDMI 170

Query: 293 CAGHEQG--GKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           CA    G   +D+C                              Q DSGGPL +      
Sbjct: 171 CATDNTGMTDRDSC------------------------------QGDSGGPLSVKDGSGI 200

Query: 351 -QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             ++G+VS GIGCA    PG+Y+R+  + GWI+DT+
Sbjct: 201 FSLVGIVSWGIGCASGY-PGVYSRVGFHAGWITDTI 235

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQG--GKDACWADSGGPLMLL 60
             +L+ V L++ +N  C A Y S+     + +  +CA    G   +D+C  DSGGPL + 
Sbjct: 140 PAVLRYVTLNITTNAFCDAVYTSD----TIYDDMICATDNTGMTDRDSCQGDSGGPLSVK 195

Query: 61  GAEST-QVIGLVSTGIG 76
                  ++G+VS GIG
Sbjct: 196 DGSGIFSLVGIVSWGIG 212

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score =  242 bits (621), Expect = 2e-79
 Identities = 87/269 (32%), Positives = 125/269 (46%), Gaps = 47/269 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG +A+ G+FP+IVS+ R+GG +CGG++++   ++TAAHC+       + S   +   
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSG----YAQSGFQIRAG 56

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
               +   I T  +  +  HPS+  S  NND+A+L+L+ SI     I  A L +   D  
Sbjct: 57  SLSRTSGGI-TSSLSSVRVHPSY--SGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPV 113

Query: 237 E-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
              S TVAGWG T+E  S       L KV + +VS   C+A Y +      +     CAG
Sbjct: 114 AGSSATVAGWGATSEGGSST--PVNLLKVTVPIVSRATCRAQYGTSA----ITNQMFCAG 167

Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
              GGKD+C                              Q DSGGP++     S  +IG 
Sbjct: 168 VSSGGKDSC------------------------------QGDSGGPIV---DSSNTLIGA 194

Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDT 384
           VS G GCARP   G+Y  +     +I   
Sbjct: 195 VSWGNGCARPNYSGVYASVGALRSFIDTY 223

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 74.1 bits (183), Expect = 2e-15
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
              L KV + +VS   C+A Y +      +     CAG   GGKD+C  DSGGP++    
Sbjct: 134 PVNLLKVTVPIVSRATCRAQYGTSA----ITNQMFCAGVSSGGKDSCQGDSGGPIV---D 186

Query: 63  ESTQVIGLVSTGIG 76
            S  +IG VS G G
Sbjct: 187 SSNTLIGAVSWGNG 200

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score =  242 bits (620), Expect = 4e-79
 Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 43/273 (15%)

Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           +I+GG   +P   P++ S++  G H CGG +I  QW++TAAHC              V L
Sbjct: 2   EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKG---QSPTVVL 58

Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             H LS+   S  T+ + + +     +    +NDI L++L  + + +  ++   + S + 
Sbjct: 59  GAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTS 118

Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
             S     V GWG T+ +    R S+ L++V ++V+S ++C +     G    + +  +C
Sbjct: 119 LRSGTKCKVTGWGATDPD--SLRPSDTLREVTVTVLSRKLCNSQSYYNGDPF-ITKDMVC 175

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG  +G KD+C                              + D+GGPL+  G       
Sbjct: 176 AGDAKGQKDSC------------------------------KGDAGGPLICKG----VFH 201

Query: 354 GLVSTGIGCARPRLPGLYTRLT-RYIGWISDTL 385
            +VS G  C     PG+YT LT +Y  WI   L
Sbjct: 202 AIVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 73.4 bits (181), Expect = 4e-15
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S+ L++V ++V+S ++C +     G    + +  +CAG  +G KD+C  D+GGPL+  G 
Sbjct: 141 SDTLREVTVTVLSRKLCNSQSYYNGDPF-ITKDMVCAGDAKGQKDSCKGDAGGPLICKG- 198

Query: 63  ESTQVIGLVSTGIG 76
                  +VS G  
Sbjct: 199 ---VFHAIVSGGHE 209

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score =  242 bits (620), Expect = 5e-79
 Identities = 83/283 (29%), Positives = 114/283 (40%), Gaps = 52/283 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCLCNGPSP---------- 165
           I  G  A  G  PWI  L    G  FCGG+++   WIVTAAHCL     P          
Sbjct: 1   IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDL 60

Query: 166 LSASQINVTLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI 223
           LS S   + L +H   R   +     V     HP +  ++F ND+AL+EL  S   +  +
Sbjct: 61  LSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFV 120

Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
            P CLP G        V V+GWG              L ++ + +V +  CQ  Y    K
Sbjct: 121 MPICLPEGPQQEG-AMVIVSGWGKQFLQRF----PETLMEIEIPIVDHSTCQKAYAPLKK 175

Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
           K+      +CAG ++GGKDAC                                DSGGP++
Sbjct: 176 KV--TRDMICAGEKEGGKDAC------------------------------AGDSGGPMV 203

Query: 344 LLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
            L  E  Q  ++G VS G  C +    G+Y+ +     WI   
Sbjct: 204 TLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRV 246

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
              L ++ + +V +  CQ  Y    KK+      +CAG ++GGKDAC  DSGGP++ L  
Sbjct: 150 PETLMEIEIPIVDHSTCQKAYAPLKKKV--TRDMICAGEKEGGKDACAGDSGGPMVTLNR 207

Query: 63  ESTQ--VIGLVSTGIG 76
           E  Q  ++G VS G  
Sbjct: 208 ERGQWYLVGTVSWGDD 223

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score =  241 bits (618), Expect = 6e-79
 Identities = 87/274 (31%), Positives = 122/274 (44%), Gaps = 46/274 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP     + V
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESP---KILRV 57

Query: 174 TLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
                + S      S   V  I+ H  +  +    DIALL+L  ++ ++D  RP  LPS 
Sbjct: 58  YSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSK 117

Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                      V GWG+        +  N LQK  + +V+N+ CQ  Y+       +   
Sbjct: 118 GERNVIYTDCWVTGWGYRKLR---DKIQNTLQKAKIPLVTNEECQKRYRGH----KITHK 170

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG+ +GGKDAC                              + DSGGPL     E  
Sbjct: 171 MICAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVW 200

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
            ++G+ S G GCA+   PG+YT +  Y+ WI + 
Sbjct: 201 HLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 234

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            N LQK  + +V+N+ CQ  Y+       +    +CAG+ +GGKDAC  DSGGPL     
Sbjct: 142 QNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDACKGDSGGPLSCKHN 197

Query: 63  ESTQVIGLVSTGIG 76
           E   ++G+ S G G
Sbjct: 198 EVWHLVGITSWGEG 211

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score =  241 bits (617), Expect = 7e-79
 Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 50/269 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A  GEFP++V L       CGG +  +  ++TAAHC+    +    + I  T  
Sbjct: 1   VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSGSGNN---TSITATGG 53

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             DL   S   V   +++  P  +  ++  D AL++L + I      +P    + +  Y+
Sbjct: 54  VVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPIN-----QPTLKIATTTAYN 108

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           + + TVAGWG   E    G +   L K  +  VS+  C++          V    +CAG+
Sbjct: 109 QGTFTVAGWGANREG---GSQQRYLLKANVPFVSDAACRSSSSFI----LVANEMICAGY 161

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST-QVIGL 355
           +   +D C                              Q DSGGP+           +G+
Sbjct: 162 DTKQEDTC------------------------------QGDSGGPMFRKDNADEWVQVGI 191

Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDT 384
           VS G GCAR    G+YT ++ +   I+  
Sbjct: 192 VSWGEGCARKGKYGVYTEVSTFASAIASA 220

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
              L K  +  VS+  C++          V    +CAG++   +D C  DSGGP+     
Sbjct: 127 QRYLLKANVPFVSDAACRSSSSFI----LVANEMICAGYDTKQEDTCQGDSGGPMFRKDN 182

Query: 63  EST-QVIGLVSTGIG 76
                 +G+VS G G
Sbjct: 183 ADEWVQVGIVSWGEG 197

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score =  246 bits (629), Expect = 1e-78
 Identities = 83/295 (28%), Positives = 133/295 (45%), Gaps = 51/295 (17%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS 164
           CGR        +IVGG   + G +PW VSL+  G H CGG+++   W++TAAHC      
Sbjct: 108 CGRR--KLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPE--R 163

Query: 165 PLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS------HSCSSFNNDIALLELTRSIQ 218
               S+  V       + P    + V  +++H         +    +NDIAL+ L+  + 
Sbjct: 164 NRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLP 223

Query: 219 WSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAW 277
            ++ I+P CLP+      + +  TV GWG T      G+++ +LQ+  + ++SN VC   
Sbjct: 224 LTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYY---GQQAGVLQEARVPIISNDVCNGA 280

Query: 278 YQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
                +   +K    CAG+ +GG DAC                              Q D
Sbjct: 281 DFYGNQ---IKPKMFCAGYPEGGIDAC------------------------------QGD 307

Query: 338 SGGPLMLLGAEST----QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
           SGGP +   + S     ++ G+VS G GCA  + PG+YT+++ +  WI   +  H
Sbjct: 308 SGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTH 362

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score = 74.0 bits (182), Expect = 1e-14
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + +LQ+  + ++SN VC        +   +K    CAG+ +GG DAC  DSGGP +   +
Sbjct: 261 AGVLQEARVPIISNDVCNGADFYGNQ---IKPKMFCAGYPEGGIDACQGDSGGPFVCEDS 317

Query: 63  EST----QVIGLVSTGIG 76
            S     ++ G+VS G G
Sbjct: 318 ISRTPRWRLCGIVSWGTG 335

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score =  241 bits (617), Expect = 1e-78
 Identities = 87/275 (31%), Positives = 136/275 (49%), Gaps = 46/275 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  ++ GE+PW VSL+       H CGG++I  QW++TAAHC    P         +
Sbjct: 1   IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQ---DVWRI 57

Query: 174 TLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
                +LS  +  T    +  I+ H ++  S  N+DIAL++L   +++++  +P  LPS 
Sbjct: 58  YSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSK 117

Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
               +   +  V GWG++ E    G   NILQKV + +V+N+ CQ  YQ       + + 
Sbjct: 118 GDTSTIYTNCWVTGWGFSKEK---GEIQNILQKVNIPLVTNEECQKRYQDY----KITQR 170

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG+++GGKDAC                              + DSGGPL+       
Sbjct: 171 MVCAGYKEGGKDAC------------------------------KGDSGGPLVCKHNGMW 200

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +++G+ S G GCAR   PG+YT++  Y+ WI +  
Sbjct: 201 RLVGITSWGEGCARREQPGVYTKVAEYMDWILEKT 235

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 75.7 bits (187), Expect = 7e-16
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            NILQKV + +V+N+ CQ  YQ       + +  +CAG+++GGKDAC  DSGGPL+    
Sbjct: 142 QNILQKVNIPLVTNEECQKRYQDY----KITQRMVCAGYKEGGKDACKGDSGGPLVCKHN 197

Query: 63  ESTQVIGLVSTGIG 76
              +++G+ S G G
Sbjct: 198 GMWRLVGITSWGEG 211

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score =  241 bits (616), Expect = 3e-78
 Identities = 88/275 (32%), Positives = 124/275 (45%), Gaps = 40/275 (14%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I GG +A  G++PW VS+   G H CGG+++ EQW+++AAHC    PS        V L 
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCF---PSEHHKEAYEVKLG 57

Query: 177 EHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H L   S       +  I+ HPS+       DIALL+L+R I +S  IRP  LP+    
Sbjct: 58  AHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQAS 117

Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN---VKES 290
           +      TV GWG    + S       LQ++ + ++S + C + Y  + K      V+E 
Sbjct: 118 FPNGLHCTVTGWGHVAPSVS-LLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQED 176

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +CAG+ +GGKDAC                              Q DSGGPL        
Sbjct: 177 MVCAGYVEGGKDAC------------------------------QGDSGGPLSCPVEGLW 206

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            + G+VS G  C     PG+YT  + Y  WI   +
Sbjct: 207 YLTGIVSWGDACGARNRPGVYTLASSYASWIQSKV 241

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 75.8 bits (187), Expect = 8e-16
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKIN---VKESQMCAGHEQGGKDACWADSGGPLML 59
              LQ++ + ++S + C + Y  + K      V+E  +CAG+ +GGKDAC  DSGGPL  
Sbjct: 141 PKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSC 200

Query: 60  LGAESTQVIGLVSTGIG 76
                  + G+VS G  
Sbjct: 201 PVEGLWYLTGIVSWGDA 217

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score =  239 bits (613), Expect = 4e-78
 Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 50/278 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           ++GG  A+PGEFPW +S +R  G   H CG +++     ++A+HC+      +  + I V
Sbjct: 1   VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCV----DGVLPNNIRV 56

Query: 174 TLKEHDLSRPS-ISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACLP- 229
                  S  S   T  V     H +     +S++NDIA+L L  SI     I+ A LP 
Sbjct: 57  IAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPA 116

Query: 230 SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
           + + DY+  +  ++GWG T+         +ILQK ++ V++   C A     G   N+ +
Sbjct: 117 NNNNDYAGTTCVISGWGRTDGT---NNLPDILQKSSIPVITTAQCTAAMVGVGGA-NIWD 172

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           + +C     G   AC                                DSGGPL       
Sbjct: 173 NHICVQDPAGNTGAC------------------------------NGDSGGPLNCPDG-G 201

Query: 350 TQVIGLVS----TGIGCARPRLPGLYTRLTRYIGWISD 383
           T+V+G+ S    +G+G   P  P +YTR++ Y+GWI D
Sbjct: 202 TRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 74.6 bits (184), Expect = 1e-15
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            +ILQK ++ V++   C A     G   N+ ++ +C     G   AC  DSGGPL     
Sbjct: 142 PDILQKSSIPVITTAQCTAAMVGVGGA-NIWDNHICVQDPAGNTGACNGDSGGPLNCPDG 200

Query: 63  ESTQVIGLVS 72
             T+V+G+ S
Sbjct: 201 -GTRVVGVTS 209

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score =  239 bits (613), Expect = 5e-78
 Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 51/279 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           ++ G     G+ PW V L        CG  +IH  W++TAAHC+        + ++ V L
Sbjct: 1   LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCM------DESKKLLVRL 54

Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            E+DL R       + +  +  HP++S S+ +NDIALL L +    S  I P CLP   L
Sbjct: 55  GEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGL 114

Query: 234 DYSE-----QSVTVAGWGWTNEN--PSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN 286
              E     Q   V GWG+ +     ++  R+ +L  + + VV +  C     +      
Sbjct: 115 AERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSN-----M 169

Query: 287 VKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG 346
           V E+ +CAG     +DAC                              + DSGGP++   
Sbjct: 170 VSENMLCAGILGDRQDAC------------------------------EGDSGGPMVASF 199

Query: 347 AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             +  ++GLVS G GC      G+YT+++RY+ WI   +
Sbjct: 200 HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHI 238

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 73.1 bits (180), Expect = 5e-15
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + +L  + + VV +  C     +      V E+ +CAG     +DAC  DSGGP++    
Sbjct: 146 TFVLNFIKIPVVPHNECSEVMSN-----MVSENMLCAGILGDRQDACEGDSGGPMVASFH 200

Query: 63  ESTQVIGLVSTGIG 76
            +  ++GLVS G G
Sbjct: 201 GTWFLVGLVSWGEG 214

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score =  238 bits (610), Expect = 6e-78
 Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 49/269 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A  G++P+ VSL+  G H CG +I+    ++TAAHC+    +    +++ V + 
Sbjct: 1   IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNL---NRLKVHVG 57

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
            + LS        V   + + ++      ND+AL+ LT  I+++DL++P  L +   D  
Sbjct: 58  TNYLSESG-DVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLE 116

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
               T+ GWG T      G   N LQ++ L V   + C+           V +S +C   
Sbjct: 117 SNPCTLTGWGSTRLG---GNTPNALQEIELIVHPQKQCERDQW------RVIDSHICTLT 167

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
           +  G+ AC                                DSGGPL+  G      IG+V
Sbjct: 168 K-RGEGAC------------------------------HGDSGGPLVANG----AQIGIV 192

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G  CA    P +YTR++ ++ WI+  L
Sbjct: 193 SFGSPCALGE-PDVYTRVSSFVSWINANL 220

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 70.3 bits (173), Expect = 3e-14
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            N LQ++ L V   + C+           V +S +C   +  G+ AC  DSGGPL+  G 
Sbjct: 135 PNALQEIELIVHPQKQCERDQW------RVIDSHICTLTK-RGEGACHGDSGGPLVANG- 186

Query: 63  ESTQVIGLVSTGIG 76
                IG+VS G  
Sbjct: 187 ---AQIGIVSFGSP 197

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score =  240 bits (615), Expect = 1e-77
 Identities = 83/317 (26%), Positives = 128/317 (40%), Gaps = 58/317 (18%)

Query: 92  LEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG--GHFCGGTIIHE 149
            E              S    R   IV G  A  G  PW V L R       CG ++I +
Sbjct: 9   FEKKSLEDKTERELLESYIDGR---IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISD 65

Query: 150 QWIVTAAHCLCNGPSP--LSASQINVTLKEHDLSRPSIST---VPVLRIMFHPSHSCS-S 203
           +W++TAAHCL   P     + + + V + +H  +R   +      + +I  HP ++   +
Sbjct: 66  RWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWREN 125

Query: 204 FNNDIALLELTRSIQWSDLIRPACLP----SGSLDYSEQSVTVAGWGWTNENPSQ---GR 256
            + DIAL++L + + +SD I P CLP    + SL  +     V GWG   E  +      
Sbjct: 126 LDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKG 185

Query: 257 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG---HEQGGKDACWVSRQWWTP 313
           + ++LQ V L +V   VC+   +     I + ++  CAG    E    DAC         
Sbjct: 186 QPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDAC--------- 231

Query: 314 HVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLY 371
                                + DSGGP ++    + +   +G+VS G GC R    G Y
Sbjct: 232 ---------------------EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY 270

Query: 372 TRLTRYIGWISDTLDIH 388
           T + R   WI   +D  
Sbjct: 271 THVFRLKKWIQKVIDQF 287

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score = 67.8 bits (166), Expect = 5e-13
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG---HEQGGKDACWADSGGPLML 59
            ++LQ V L +V   VC+   +     I + ++  CAG    E    DAC  DSGGP ++
Sbjct: 187 PSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 241

Query: 60  LGAESTQ--VIGLVSTGIG 76
               + +   +G+VS G G
Sbjct: 242 KSPFNNRWYQMGIVSWGEG 260

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score =  250 bits (640), Expect = 1e-77
 Identities = 88/286 (30%), Positives = 126/286 (44%), Gaps = 46/286 (16%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCN 161
                 ++   +IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC   
Sbjct: 376 MDNECTTKIKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYG 435

Query: 162 GPSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQW 219
             SP     + V     + S      S   V  I+ H  +  +    DIALL+L  ++ +
Sbjct: 436 VESP---KILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 492

Query: 220 SDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
           +D  RP CLPS            V GWG+        +  N LQK  + +V+N+ CQ  Y
Sbjct: 493 TDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLR---DKIQNTLQKAKIPLVTNEECQKRY 549

Query: 279 QSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
           +       +    +CAG+ +GGKDAC                              + DS
Sbjct: 550 RGH----KITHKMICAGYREGGKDAC------------------------------KGDS 575

Query: 339 GGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
           GGPL     E   ++G+ S G GCA+   PG+YT +  Y+ WI + 
Sbjct: 576 GGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 621

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 77.6 bits (191), Expect = 1e-15
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            N LQK  + +V+N+ CQ  Y+       +    +CAG+ +GGKDAC  DSGGPL     
Sbjct: 529 QNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDACKGDSGGPLSCKHN 584

Query: 63  ESTQVIGLVSTGIG 76
           E   ++G+ S G G
Sbjct: 585 EVWHLVGITSWGEG 598

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score =  238 bits (609), Expect = 1e-77
 Identities = 56/271 (20%), Positives = 101/271 (37%), Gaps = 45/271 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  ++  + PW V +      FCGG+I+   +++TAA C+         S I++   
Sbjct: 1   IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDG----TKPSDISIHYG 56

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSD-LIRPACLPSGSLD- 234
               +     T  + + ++   +   +  N+ A++E    I+  D   +   LPS   D 
Sbjct: 57  SSYRTTK--GTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDP 114

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
             + SV V+GWG TN    +   S  L +   +VV  + C+  Y+       + +   CA
Sbjct: 115 EPDTSVLVSGWGSTNFKSLE--YSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCA 172

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G E                                       D+G P +  G     ++G
Sbjct: 173 GGEYDETYIG------------------------------YGDAGDPAVQNG----TLVG 198

Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           + S          P ++ R+  Y+  I D +
Sbjct: 199 VASYISSMP-SEFPSVFLRVGYYVLDIKDII 228

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score = 81.9 bits (203), Expect = 4e-18
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S  L +   +VV  + C+  Y+       + +   CAG E       + D+G P +  G 
Sbjct: 136 SGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNG- 194

Query: 63  ESTQVIGLVSTGIG 76
               ++G+ S    
Sbjct: 195 ---TLVGVASYISS 205

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score =  238 bits (609), Expect = 7e-77
 Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 49/291 (16%)

Query: 104 PCGRSLASRR--TGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCN 161
            CGR    R     +I+GG ++ PG  PW+ ++   G  FC G+++H  W+V+AAHC  +
Sbjct: 21  ACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSH 79

Query: 162 GPSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPS-HSCSSFNNDIALLELT---- 214
            P       ++V L +H  +R      T  + + + +      +  ++D+ L+ L     
Sbjct: 80  SPPR---DSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGD 136

Query: 215 RSIQWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV 273
           R    S  ++P CLP     +       +AGWG  +EN      S+ L++  + +V++  
Sbjct: 137 RCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDEN--VSGYSSSLREALVPLVADHK 194

Query: 274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPP 333
           C +          +  + +CAG+     DAC                             
Sbjct: 195 CSSPEVYGAD---ISPNMLCAGYFDCKSDAC----------------------------- 222

Query: 334 LQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
            Q DSGGPL         + G++S G GC R   PG+YTR+  Y+ WI+D 
Sbjct: 223 -QGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 272

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 70.8 bits (174), Expect = 6e-14
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S+ L++  + +V++  C +          +  + +CAG+     DAC  DSGGPL     
Sbjct: 179 SSSLREALVPLVADHKCSSPEVYGAD---ISPNMLCAGYFDCKSDACQGDSGGPLACEKN 235

Query: 63  ESTQVIGLVSTGIG 76
               + G++S G G
Sbjct: 236 GVAYLYGIISWGDG 249

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score =  236 bits (605), Expect = 1e-76
 Identities = 80/292 (27%), Positives = 126/292 (43%), Gaps = 55/292 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG--HFCGGTIIHEQWIVTAAHCLCNGPSP--LSASQIN 172
           IV G  A  G  PW V L R       CG ++I ++W++TAAHCL   P     + + + 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60

Query: 173 VTLKEHDLSRPSIST---VPVLRIMFHPSHSCS-SFNNDIALLELTRSIQWSDLIRPACL 228
           V + +H  +R   +      + +I  HP ++   + + DIAL++L + + +SD I P CL
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120

Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQ---GRRSNILQKVALSVVSNQVCQAWYQSE 281
           P    + SL  +     V GWG   E  +      + ++LQ V L +V   VC+   +  
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTR-- 178

Query: 282 GKKINVKESQMCAGH---EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
              I + ++  CAG+   E    DAC                              + DS
Sbjct: 179 ---IRITDNMFCAGYKPDEGKRGDAC------------------------------EGDS 205

Query: 339 GGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
           GGP ++    + +   +G+VS G GC R    G YT + R   WI   +D  
Sbjct: 206 GGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQF 257

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 68.1 bits (167), Expect = 3e-13
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 10/79 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH---EQGGKDACWADSGGPLML 59
            ++LQ V L +V   VC+   +     I + ++  CAG+   E    DAC  DSGGP ++
Sbjct: 157 PSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 211

Query: 60  LGAESTQ--VIGLVSTGIG 76
               + +   +G+VS G G
Sbjct: 212 KSPFNNRWYQMGIVSWGEG 230

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score =  236 bits (604), Expect = 1e-76
 Identities = 93/287 (32%), Positives = 141/287 (49%), Gaps = 52/287 (18%)

Query: 105 CGRSLAS--RRTGKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCN 161
           CG+      +  G++VGG  A+P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL  
Sbjct: 4   CGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEK 63

Query: 162 GPSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQW 219
            P P   S   V L  H      P +  + V R+   P+        DIALL+L+     
Sbjct: 64  SPRP---SSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVI 114

Query: 220 SDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
           +D + PACLPS +   ++     + GWG T         + +L++  L V+ N+VC  + 
Sbjct: 115 TDKVIPACLPSPNYVVADRTECFITGWGETQGTFG----AGLLKEAQLPVIENKVCNRYE 170

Query: 279 QSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
              G+   V+ +++CAGH  GG D+C                              Q D+
Sbjct: 171 FLNGR---VQSTELCAGHLAGGTDSC------------------------------QGDA 197

Query: 339 GGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           GGPL+    +   + G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 198 GGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + +L++  L V+ N+VC  +    G+   V+ +++CAGH  GG D+C  D+GGPL+    
Sbjct: 150 AGLLKEAQLPVIENKVCNRYEFLNGR---VQSTELCAGHLAGGTDSCQGDAGGPLVCFEK 206

Query: 63  ESTQVIGLVSTGIG 76
           +   + G+ S G+G
Sbjct: 207 DKYILQGVTSWGLG 220

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score =  239 bits (612), Expect = 7e-76
 Identities = 79/310 (25%), Positives = 119/310 (38%), Gaps = 77/310 (24%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLC 160
           CG  L+ R    +  G        PW+  L           CGG +I E++I+TAAHC+ 
Sbjct: 111 CGNFLSQR----VSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVH 166

Query: 161 NGPSPLSASQINVTLKEHDLSR--------------PSISTVPVLRIMFHPSHSCSSFNN 206
              + L      + L EH +S               P +  V + + + H  +      +
Sbjct: 167 GLQNDL----YEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMH 222

Query: 207 DIALLELTRSIQWSDLIRPACLPSG----SLDYSEQSVTVAGWGWTNENPSQGRRSNILQ 262
           DIALL+L RS+ +   I+P CLP             +  V GWG T      G  S++L 
Sbjct: 223 DIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTT----ENGSSSDVLL 278

Query: 263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYP 322
           +  + +     C   Y+       V  SQ+C G     +D+C                  
Sbjct: 279 QANVPLQPRSACSQAYRR-----AVPLSQLCVGGG-DLQDSC------------------ 314

Query: 323 SHRSGVHWDPPLQADSGGPLMLLGAESTQ------VIGLVSTG-IGCARPRLPGLYTRLT 375
                       + DSGGPL        +        G+VS G + C +  LPGLYT + 
Sbjct: 315 ------------KGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVG 362

Query: 376 RYIGWISDTL 385
            Y+ WI+DT+
Sbjct: 363 EYVQWITDTM 372

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score = 80.7 bits (199), Expect = 6e-17
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 12/80 (15%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
             S++L +  + +     C   Y+       V  SQ+C G     +D+C  DSGGPL   
Sbjct: 272 SSSDVLLQANVPLQPRSACSQAYRR-----AVPLSQLCVGGG-DLQDSCKGDSGGPLQAP 325

Query: 61  GAESTQ------VIGLVSTG 74
                +        G+VS G
Sbjct: 326 AQYLGEYAPKMVEFGIVSQG 345

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score =  234 bits (598), Expect = 1e-75
 Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)

Query: 105 CGRSLAS---RRTGKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLC 160
           CG            +IV G  A PG +PW VSL+ + G HFCGG++I+E W+VTAAHC  
Sbjct: 1   CGVPAIQPVLSGLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCG- 59

Query: 161 NGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ 218
                   +   V   E D       I  + + ++  +  ++  + NNDI LL+L+ +  
Sbjct: 60  ------VTTSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAAS 113

Query: 219 WSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAW 277
           +S  +   CLPS S D++   +    GWG T          + LQ+ +L ++SN  C+ +
Sbjct: 114 FSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTN--ANTPDRLQQASLPLLSNTNCKKY 171

Query: 278 YQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
           + ++     +K++ +CAG    G  +C                                D
Sbjct: 172 WGTK-----IKDAMICAG--ASGVSSC------------------------------MGD 194

Query: 338 SGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           SGGPL+     +  ++G+VS G        PG+Y R+T  + W+  TL
Sbjct: 195 SGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 242

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 7/74 (9%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + LQ+ +L ++SN  C+ ++ ++     +K++ +CAG    G  +C  DSGGPL+    
Sbjct: 152 PDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSCMGDSGGPLVCKKN 204

Query: 63  ESTQVIGLVSTGIG 76
            +  ++G+VS G  
Sbjct: 205 GAWTLVGIVSWGSS 218

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score =  234 bits (599), Expect = 3e-75
 Identities = 81/286 (28%), Positives = 128/286 (44%), Gaps = 55/286 (19%)

Query: 117 IVGGLAANPGEFPWIVSL------KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
           I+GG  A  G +PW+VSL           H CGG++++ QW++TAAHC          + 
Sbjct: 1   IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKV---TD 57

Query: 171 INVTLKEHDLSRPSISTV-------PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI 223
             +     ++   +   V        V +I+ H  +S SS  NDIAL+++T  +     I
Sbjct: 58  WRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFI 117

Query: 224 RPACLPSGSLDYSE--QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSE 281
            P CLP          Q+  VAGWG+  EN  +   S +LQ+  + ++   +C +     
Sbjct: 118 GPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRT--SPMLQEARVDLIDLGLCNSTRWYN 175

Query: 282 GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
           G+   ++ + +CAG+ +G  D C                              Q DSGGP
Sbjct: 176 GR---IRSTNVCAGYPEGKIDTC------------------------------QGDSGGP 202

Query: 342 LMLLGAEST--QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           LM   +      V+G+ S G+GCAR + PG+YT    Y+ WI+  +
Sbjct: 203 LMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKI 248

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 73.9 bits (182), Expect = 5e-15
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S +LQ+  + ++   +C +     G+   ++ + +CAG+ +G  D C  DSGGPLM   +
Sbjct: 152 SPMLQEARVDLIDLGLCNSTRWYNGR---IRSTNVCAGYPEGKIDTCQGDSGGPLMCKDS 208

Query: 63  EST--QVIGLVSTGIG 76
                 V+G+ S G+G
Sbjct: 209 AENSYVVVGITSWGVG 224

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score =  232 bits (595), Expect = 3e-75
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 47/276 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG ++ PG  PW+ ++   G  FC G+++H  W+V+AAHC  + P       ++V L 
Sbjct: 1   IIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSHSPPR---DSVSVVLG 56

Query: 177 EHDLSR--PSISTVPVLRIMFHPS-HSCSSFNNDIALLELT----RSIQWSDLIRPACLP 229
           +H  +R      T  + + + +      +  ++D+ L+ L     R    S  ++P CLP
Sbjct: 57  QHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLP 116

Query: 230 SGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
                +       +AGWG  +EN      S+ L++  + +V++  C +          + 
Sbjct: 117 EPGSTFPAGHKCQIAGWGHLDEN--VSGYSSSLREALVPLVADHKCSSPEVYGAD---IS 171

Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
            + +CAG+     DAC                              Q DSGGPL      
Sbjct: 172 PNMLCAGYFDCKSDAC------------------------------QGDSGGPLACEKNG 201

Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
              + G++S G GC R   PG+YTR+  Y+ WI+D 
Sbjct: 202 VAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 237

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 70.0 bits (172), Expect = 6e-14
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S+ L++  + +V++  C +          +  + +CAG+     DAC  DSGGPL     
Sbjct: 144 SSSLREALVPLVADHKCSSPEVYGAD---ISPNMLCAGYFDCKSDACQGDSGGPLACEKN 200

Query: 63  ESTQVIGLVSTGIG 76
               + G++S G G
Sbjct: 201 GVAYLYGIISWGDG 214

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score =  231 bits (592), Expect = 6e-75
 Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 47/272 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG    P   P++ SL+R+G H CGG ++H +W++TAAHCL         +Q+ + L 
Sbjct: 1   IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRM-----AQLRLVLG 55

Query: 177 EHDLSRPSISTVPVLRIMFHPS-HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
            H L  P + T  +   + HP      +  ND+ALL+L   ++ S  IRP  LPS     
Sbjct: 56  LHTLDSPGL-TFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVV 114

Query: 236 SE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
           +     ++AGWG T++    GR S +L+++ L V+  ++C       G   ++  S +C 
Sbjct: 115 AAGTRCSMAGWGLTHQG---GRLSRVLRELDLQVLDTRMCNNSRFWNG---SLSPSMVCL 168

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
             +   +  C                              + DSGGPL+        + G
Sbjct: 169 AADSKDQAPC------------------------------KGDSGGPLVCGK--GRVLAG 196

Query: 355 LVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           ++S     C     P + T +  Y+ WI    
Sbjct: 197 VLSFSSRVCTDIFKPPVATAVAPYVSWIRKVT 228

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 69.9 bits (172), Expect = 6e-14
 Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S +L+++ L V+  ++C       G   ++  S +C   +   +  C  DSGGPL+    
Sbjct: 135 SRVLRELDLQVLDTRMCNNSRFWNG---SLSPSMVCLAADSKDQAPCKGDSGGPLVCGK- 190

Query: 63  ESTQVIGLVSTGIG 76
               + G++S    
Sbjct: 191 -GRVLAGVLSFSSR 203

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score =  231 bits (591), Expect = 6e-75
 Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 54/274 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P  VSL   G HFCGG++++E W+V+AAHC          S++ V L 
Sbjct: 1   IVGGYECKAYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCY--------KSRVEVRLG 51

Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EH++     S   +   R++ HP++S  + +NDI L++L++    +  ++P  LP+ S  
Sbjct: 52  EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SCA 110

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +    TV+GWG T  +      SN LQ + + ++S   C   Y        +  +  CA
Sbjct: 111 PAGTMCTVSGWGNTMSS---TADSNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCA 162

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188

Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
           +VS G GCA P  PG+Y ++  +  W++ T+  +
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMASY 222

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 72.2 bits (178), Expect = 8e-15
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 9/74 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           SN LQ + + ++S   C   Y        +  +  CAG+ +GGKD+C  DSGGP++  G 
Sbjct: 131 SNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCAGYLEGGKDSCQGDSGGPVVCNG- 184

Query: 63  ESTQVIGLVSTGIG 76
              ++ G+VS G G
Sbjct: 185 ---ELQGVVSWGYG 195

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score =  231 bits (591), Expect = 6e-75
 Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 53/273 (19%)

Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW   L       FCGGTI+ E +I+TAAHCL        A +  V +
Sbjct: 1   IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ------AKRFKVRV 54

Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            + +  +     +   V  ++ H   +  +++ DIA+L L   I +   + PA LP+   
Sbjct: 55  GDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTA-- 112

Query: 234 DYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
             +  +   ++GWG T    S     + LQ +   V+S   C+A Y  +     +  +  
Sbjct: 113 PPATGTKCLISGWGNTAS--SGADYPDELQCLDAPVLSQAKCEASYPGK-----ITSNMF 165

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           C G  +GGKD+C                              Q DSGGP++  G    Q+
Sbjct: 166 CVGFLEGGKDSC------------------------------QGDSGGPVVCNG----QL 191

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+VS G GCA+   PG+YT++  Y+ WI +T+
Sbjct: 192 QGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 224

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 72.2 bits (178), Expect = 8e-15
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 9/74 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + LQ +   V+S   C+A Y  +     +  +  C G  +GGKD+C  DSGGP++  G 
Sbjct: 136 PDELQCLDAPVLSQAKCEASYPGK-----ITSNMFCVGFLEGGKDSCQGDSGGPVVCNG- 189

Query: 63  ESTQVIGLVSTGIG 76
              Q+ G+VS G G
Sbjct: 190 ---QLQGVVSWGDG 200

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score =  230 bits (590), Expect = 7e-75
 Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 51/270 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+ G     G  PW V+L       CGG +++E+W++TAAHC          ++  V L 
Sbjct: 1   IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHC--------KMNEYTVHLG 52

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
              L       +   +   HP +S  +  ND+ L++L    + S +++   LPS   +  
Sbjct: 53  SDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPS-RCEPP 111

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
             + TV+GWG T          + L  V + ++S Q C   Y+       ++ S +CAG 
Sbjct: 112 GTTCTVSGWGTTTS--PDVTFPSDLMCVDVKLISPQDCTKVYKDL-----LENSMLCAGI 164

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
               K+AC                                DSGGPL+  G     + GLV
Sbjct: 165 PDSKKNAC------------------------------NGDSGGPLVCRG----TLQGLV 190

Query: 357 STG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           S G   C +P  PG+YT++ ++  WI+DT+
Sbjct: 191 SWGTFPCGQPNDPGVYTQVCKFTKWINDTM 220

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score = 70.6 bits (174), Expect = 2e-14
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 9/72 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + L  V + ++S Q C   Y+       ++ S +CAG     K+AC  DSGGPL+  G 
Sbjct: 131 PSDLMCVDVKLISPQDCTKVYKDL-----LENSMLCAGIPDSKKNACNGDSGGPLVCRG- 184

Query: 63  ESTQVIGLVSTG 74
               + GLVS G
Sbjct: 185 ---TLQGLVSWG 193

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score =  236 bits (603), Expect = 2e-74
 Identities = 82/318 (25%), Positives = 125/318 (39%), Gaps = 58/318 (18%)

Query: 91  DLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG--GHFCGGTIIH 148
             E              S    R   IV G  A  G  PW V L R       CG ++I 
Sbjct: 143 LFEKKSLEDKTERELLESYIDGR---IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLIS 199

Query: 149 EQWIVTAAHCLCNGPSP--LSASQINVTLKEHDLSRPSISTV---PVLRIMFHPSHSCS- 202
           ++W++TAAHCL   P     + + + V + +H  +R   +      + +I  HP ++   
Sbjct: 200 DRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRE 259

Query: 203 SFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSE----QSVTVAGWGWTNENPSQ---G 255
           + + DIAL++L + + +SD I P CLP      S         V GWG   E  +     
Sbjct: 260 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGK 319

Query: 256 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH---EQGGKDACWVSRQWWT 312
            + ++LQ V L +V   VC+        +I + ++  CAG+   E    DAC        
Sbjct: 320 GQPSVLQVVNLPIVERPVCKDST-----RIRITDNMFCAGYKPDEGKRGDAC-------- 366

Query: 313 PHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST--QVIGLVSTGIGCARPRLPGL 370
                                 + DSGGP ++    +     +G+VS G GC R    G 
Sbjct: 367 ----------------------EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF 404

Query: 371 YTRLTRYIGWISDTLDIH 388
           YT + R   WI   +D  
Sbjct: 405 YTHVFRLKKWIQKVIDQF 422

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 66.8 bits (163), Expect = 3e-12
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH---EQGGKDACWADSGGPLML 59
            ++LQ V L +V   VC+        +I + ++  CAG+   E    DAC  DSGGP ++
Sbjct: 322 PSVLQVVNLPIVERPVCKDST-----RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 376

Query: 60  LGAEST--QVIGLVSTGIG 76
               +     +G+VS G G
Sbjct: 377 KSPFNNRWYQMGIVSWGEG 395

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score =  229 bits (587), Expect = 2e-74
 Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 53/271 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC          S I V L 
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCY--------KSGIQVRLG 51

Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           E +++    +   +   + + HPS++ ++ NNDI L++L  +   +  +    LP+ S  
Sbjct: 52  EDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPT-SCA 110

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +     ++GWG T    S     ++L+ +   ++S+  C++ Y  +     +  +  CA
Sbjct: 111 SAGTQCLISGWGNTKS--SGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCA 163

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+ +GGKD+C                              Q DSGGP++  G    ++ G
Sbjct: 164 GYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG 189

Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCA+   PG+YT++  Y+ WI  T+
Sbjct: 190 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 71.8 bits (177), Expect = 9e-15
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 9/74 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            ++L+ +   ++S+  C++ Y  +     +  +  CAG+ +GGKD+C  DSGGP++  G 
Sbjct: 132 PDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAGYLEGGKDSCQGDSGGPVVCSG- 185

Query: 63  ESTQVIGLVSTGIG 76
              ++ G+VS G G
Sbjct: 186 ---KLQGIVSWGSG 196

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score =  228 bits (584), Expect = 1e-73
 Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 53/274 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +V G+        W+VSL+    H CGG++I E W++TA  C                L 
Sbjct: 1   VVNGIPT-RTNIGWMVSLRYRNKHICGGSLIKESWVLTARQCF----PSRDLKDYEAWLG 55

Query: 177 EHDLSRPSIS----TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
            HD+           + V ++++ P        +D+ L++L R     D +    LP+  
Sbjct: 56  IHDVHGRGDEKCKQVLNVSQLVYGPE------GSDLVLMKLARPAVLDDFVSTIDLPNYG 109

Query: 233 LDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
               E  S +V GWG+T           +L+   L ++ N+ C   ++ +     + ES+
Sbjct: 110 STIPEKTSCSVYGWGYTGLINY----DGLLRVAHLYIMGNEKCSQHHRGKV---TLNESE 162

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG E+ G   C                              + D GGPL+    +   
Sbjct: 163 ICAGAEKIGSGPC------------------------------EGDYGGPLVCEQHKMRM 192

Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           V+G++  G GCA P  PG++ R+  Y  WI   +
Sbjct: 193 VLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKII 226

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
             +L+   L ++ N+ C   ++ +     + ES++CAG E+ G   C  D GGPL+    
Sbjct: 132 DGLLRVAHLYIMGNEKCSQHHRGKV---TLNESEICAGAEKIGSGPCEGDYGGPLVCEQH 188

Query: 63  ESTQVIGLVSTGIG 76
           +   V+G++  G G
Sbjct: 189 KMRMVLGVIVPGRG 202

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score =  228 bits (584), Expect = 2e-73
 Identities = 83/294 (28%), Positives = 118/294 (40%), Gaps = 54/294 (18%)

Query: 105 CG-RSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCL 159
           CG        + ++VGG  A P  +PW +SL         H CGGT+I    ++TAAHC+
Sbjct: 1   CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60

Query: 160 CNGPSPLSASQINVTLKEHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS 216
            N           V L +++L          V V  I  H   +     NDIAL++L  +
Sbjct: 61  SN------TLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAET 114

Query: 217 IQWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ 275
           ++  D I+ ACLPS      +     V GWG    N   G  +  LQ+    VV    C 
Sbjct: 115 VELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTN---GPIAAELQQGLQPVVDYATCS 171

Query: 276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ 335
                      VKE+ +CAG + G   AC                               
Sbjct: 172 QRDWWGTT---VKETMVCAGGD-GVISAC------------------------------N 197

Query: 336 ADSGGPLMLLGAESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
            DSGGPL         V G+VS  +G+ C   + P ++TR++ YI WI+  L +
Sbjct: 198 GDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKLQL 251

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 70.3 bits (173), Expect = 5e-14
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           +  LQ+    VV    C            VKE+ +CAG + G   AC  DSGGPL     
Sbjct: 154 AAELQQGLQPVVDYATCSQRDWWGTT---VKETMVCAGGD-GVISACNGDSGGPLNCQAD 209

Query: 63  ESTQVIGLVSTGIG 76
               V G+VS G G
Sbjct: 210 GQWDVRGIVSFGSG 223

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score =  227 bits (582), Expect = 2e-73
 Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 61/279 (21%)

Query: 117 IVGGLAANPGEFPWIVSL--KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           I+GG   N  E  ++V+L   R    FCGGT+I+++W++TAAHC              + 
Sbjct: 1   IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHC--------DRKNFRIK 52

Query: 175 LKEHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           L  H    P+      VP  +     S + + ++ DI L+ L   ++ S  I P  LPS 
Sbjct: 53  LGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPS- 111

Query: 232 SLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
               S  SV     + GWG  +   ++G   ++   V ++++  ++C+A Y         
Sbjct: 112 ----SPPSVGSVCRIMGWGRISP--TEGTYPDVPHCVNINLLEYEMCRAPYPEFELPA-- 163

Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
               +CAG  +GGKD C                              + DSGGPL+  G 
Sbjct: 164 TSRTLCAGILEGGKDTC------------------------------KGDSGGPLICNG- 192

Query: 348 ESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
              Q  G+ S G   CA+P  P  YT++  ++ WI + +
Sbjct: 193 ---QFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENII 228

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 76.5 bits (189), Expect = 3e-16
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            ++   V ++++  ++C+A Y             +CAG  +GGKD C  DSGGPL+  G 
Sbjct: 136 PDVPHCVNINLLEYEMCRAPYPEFELPA--TSRTLCAGILEGGKDTCKGDSGGPLICNG- 192

Query: 63  ESTQVIGLVSTGIG 76
              Q  G+ S G  
Sbjct: 193 ---QFQGIASWGDD 203

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score =  227 bits (581), Expect = 2e-73
 Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 64/277 (23%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG   N  E  ++  +    G  CGGT+I+++W++TA HC            + + L 
Sbjct: 1   VIGGDECNINEHRFLALV-YANGSLCGGTLINQEWVLTARHCD--------RGNMRIYLG 51

Query: 177 EHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H+L   +       P  +     + + + ++ DI L+ L R ++ S  I P  LPS   
Sbjct: 52  MHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPS--- 108

Query: 234 DYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
             +  SV     + GWG            ++     ++++   VCQA Y+       +  
Sbjct: 109 --NPPSVGSVCRIMGWGTITS--PNATLPDVPHCANINILDYAVCQAAYK------GLAA 158

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           + +CAG  +GGKD C                              + DSGGPL+  G   
Sbjct: 159 TTLCAGILEGGKDTC------------------------------KGDSGGPLICNG--- 185

Query: 350 TQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
            Q  G++S G   CA+PR PG+YT++  Y  WI   +
Sbjct: 186 -QFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSII 221

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 71.4 bits (176), Expect = 2e-14
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 10/73 (13%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            ++     ++++   VCQA Y+       +  + +CAG  +GGKD C  DSGGPL+  G 
Sbjct: 133 PDVPHCANINILDYAVCQAAYK------GLAATTLCAGILEGGKDTCKGDSGGPLICNG- 185

Query: 63  ESTQVIGLVSTGI 75
              Q  G++S G 
Sbjct: 186 ---QFQGILSVGG 195

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score =  227 bits (580), Expect = 3e-73
 Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 50/273 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  A     P++ S++ +G H CGG ++ EQW+++AAHCL       +  ++ V L 
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCL----EDAADGKVQVLLG 56

Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H LS+  PS     VLR + HP     + ++D+ LL+L+        +RP        D
Sbjct: 57  AHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRD 116

Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
            +      VAGWG  N     GRR + LQ V L V+    C      +G    + E  MC
Sbjct: 117 VAPGTLCDVAGWGIVNHA---GRRPDSLQHVLLPVLDRATCNRRTHHDGA---ITERLMC 170

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           A      +D+C                              + D+GGPL+  G     + 
Sbjct: 171 AE--SNRRDSC------------------------------KGDAGGPLVCGG----VLE 194

Query: 354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           G+V++G   C   + PG+YTR+  Y  WI   L
Sbjct: 195 GVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 63.3 bits (155), Expect = 8e-12
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           RR + LQ V L V+    C      +G    + E  MCA      +D+C  D+GGPL+  
Sbjct: 136 RRPDSLQHVLLPVLDRATCNRRTHHDGA---ITERLMCAE--SNRRDSCKGDAGGPLVCG 190

Query: 61  GAESTQVIGLVSTGIG 76
           G     + G+V++G  
Sbjct: 191 G----VLEGVVTSGSR 202

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score =  226 bits (578), Expect = 8e-73
 Identities = 87/277 (31%), Positives = 127/277 (45%), Gaps = 44/277 (15%)

Query: 117 IVGGLAANPGEFPWIVSL---KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A   ++PW VSL    R+  HFCGG++IH QW++TAAHC+  GP     + + V
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCV--GPDVKDLATLRV 58

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            L+E  L       +PV RI+ HP         DIALLEL   +  S  +    LP  S 
Sbjct: 59  QLREQHLYYQD-QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASE 117

Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN----VK 288
            +       V GWG  + +         L++V + ++ N +C A Y       +    ++
Sbjct: 118 TFPPGMPCWVTGWGDVDNDEPLP-PPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIR 176

Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           +  +CAG+    +D+C                              Q DSGGPL+     
Sbjct: 177 DDMLCAGN--SQRDSC------------------------------QGDSGGPLVCKVNG 204

Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +    G+VS G GCA+P  PG+YTR+T Y+ WI   +
Sbjct: 205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 67.3 bits (165), Expect = 5e-13
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 6/78 (7%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKIN----VKESQMCAGHEQGGKDACWADSGGPLM 58
              L++V + ++ N +C A Y       +    +++  +CAG+    +D+C  DSGGPL+
Sbjct: 142 PFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSCQGDSGGPLV 199

Query: 59  LLGAESTQVIGLVSTGIG 76
                +    G+VS G G
Sbjct: 200 CKVNGTWLQAGVVSWGEG 217

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score =  226 bits (579), Expect = 9e-73
 Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 57/288 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHG------GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
           I GGL A+    PW  ++             CGG +I   WI++AAHC      P     
Sbjct: 1   IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPP---HH 57

Query: 171 INVTLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLEL----TRSIQWSDLIR 224
           + V L       P        V + + H      +++NDIALL+L    +R  Q S ++R
Sbjct: 58  LTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVR 117

Query: 225 PACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
             CLP   L   +     ++G+G           S  L++  + +  +  C + +     
Sbjct: 118 TVCLPPADLQLPDWTECELSGYGKHEAL--SPFYSERLKEAHVRLYPSSRCTSQHLLNRT 175

Query: 284 KINVKESQMCAGHEQGG------KDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
              V ++ +CAG  + G       DAC                              Q D
Sbjct: 176 ---VTDNMLCAGDTRSGGPQANLHDAC------------------------------QGD 202

Query: 338 SGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           SGGPL+ L      ++G++S G+GC +  +PG+YT++T Y+ WI D +
Sbjct: 203 SGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNM 250

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGG------KDACWADSGGP 56
           S  L++  + +  +  C + +        V ++ +CAG  + G       DAC  DSGGP
Sbjct: 150 SERLKEAHVRLYPSSRCTSQHLLNRT---VTDNMLCAGDTRSGGPQANLHDACQGDSGGP 206

Query: 57  LMLLGAESTQVIGLVSTGIG 76
           L+ L      ++G++S G+G
Sbjct: 207 LVCLNDGRMTLVGIISWGLG 226

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score =  223 bits (572), Expect = 4e-72
 Identities = 79/271 (29%), Positives = 118/271 (43%), Gaps = 55/271 (20%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +V G   +    P+  +L   G   CGG +IH  W++TAAHC            + V L 
Sbjct: 1   LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCK--------KPNLQVFLG 52

Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           +H+L +   S     V+R + HP +  +S + DI LL L R  + S+LI+P  L      
Sbjct: 53  KHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCS- 111

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +  S  + GWG T +    G   + +Q   + +VS + C+  Y  +     + ++ +CA
Sbjct: 112 ANTTSCHILGWGKTAD----GDFPDTIQCAYIHLVSREECEHAYPGQ-----ITQNMLCA 162

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G E+ GKD+C                              Q DSGGPL+        + G
Sbjct: 163 GDEKYGKDSC------------------------------QGDSGGPLVCGD----HLRG 188

Query: 355 LVSTG-IGCARPRLPGLYTRLTRYIGWISDT 384
           LVS G I C     PG+YT + RY  WI  T
Sbjct: 189 LVSWGNIPCGSKEKPGVYTNVCRYTNWIQKT 219

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score = 68.3 bits (168), Expect = 1e-13
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 9/72 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + +Q   + +VS + C+  Y  +     + ++ +CAG E+ GKD+C  DSGGPL+    
Sbjct: 131 PDTIQCAYIHLVSREECEHAYPGQ-----ITQNMLCAGDEKYGKDSCQGDSGGPLVCGD- 184

Query: 63  ESTQVIGLVSTG 74
               + GLVS G
Sbjct: 185 ---HLRGLVSWG 193

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score =  227 bits (581), Expect = 5e-72
 Identities = 72/319 (22%), Positives = 117/319 (36%), Gaps = 69/319 (21%)

Query: 88  WTLDLEVGGSSPIAGVPCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTI 146
           W  +  +G   P     CG          +I+GG  A+   FPW V        + GG +
Sbjct: 54  WV-NEVLGPELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDNP---WAGGAL 109

Query: 147 IHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSIST---VPVLRIMFHPS----- 198
           I+E W++TAAH +          +  + +    +    ++    +    +  HP      
Sbjct: 110 INEYWVLTAAHVV------EGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLA 163

Query: 199 --HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQS---VTVAGWGWTNENPS 253
                ++F+NDIAL+ L   ++    + P CLP  S DY+        ++GWG T +   
Sbjct: 164 VPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDR 223

Query: 254 QGRRSNILQKVALSVVSNQVCQAWYQ----SEGKKINVKESQMCAGHEQGGKDACWVSRQ 309
               +  L+   L V   + C+        ++ +      + +CAG E  G D+C     
Sbjct: 224 ----AVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGE-KGMDSC----- 273

Query: 310 WWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ---VIGLVSTGIGCARPR 366
                                    + DSGG   +            GLVS G  C    
Sbjct: 274 -------------------------KGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-- 306

Query: 367 LPGLYTRLTRYIGWISDTL 385
             GLYTR+  Y+ WI  T+
Sbjct: 307 -YGLYTRVKNYVDWIMKTM 324

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 72.5 bits (178), Expect = 2e-14
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 8/83 (9%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQ----SEGKKINVKESQMCAGHEQGGKDACWADSGGP 56
            R+  L+   L V   + C+        ++ +      + +CAG E  G D+C  DSGG 
Sbjct: 222 DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGE-KGMDSCKGDSGGA 280

Query: 57  LMLLGAESTQ---VIGLVSTGIG 76
             +            GLVS G  
Sbjct: 281 FAVQDPNDKTKFYAAGLVSWGPQ 303

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score =  223 bits (571), Expect = 6e-72
 Identities = 78/272 (28%), Positives = 110/272 (40%), Gaps = 56/272 (20%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+ G   +P   PW  +L      FC G ++H QW+++AAHC          +   + L 
Sbjct: 1   IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCF--------QNSYTIGLG 52

Query: 177 EHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H L          V     + HP ++     ND+ L++L  S+  SD IR   + S   
Sbjct: 53  LHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIAS-QC 111

Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
             +  S  V+GWG      + GR   +LQ V +SVVS +VC   Y           S  C
Sbjct: 112 PTAGNSCLVSGWGLL----ANGRMPTVLQCVNVSVVSEEVCSKLYDPL-----YHPSMFC 162

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG  Q  KD+C                                DSGGPL+  G     + 
Sbjct: 163 AGGGQDQKDSC------------------------------NGDSGGPLICNG----YLQ 188

Query: 354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDT 384
           GLVS G   C +  +PG+YT L ++  WI  T
Sbjct: 189 GLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKT 220

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 72.9 bits (180), Expect = 4e-15
 Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 9/76 (11%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           R   +LQ V +SVVS +VC   Y           S  CAG  Q  KD+C  DSGGPL+  
Sbjct: 130 RMPTVLQCVNVSVVSEEVCSKLYDPL-----YHPSMFCAGGGQDQKDSCNGDSGGPLICN 184

Query: 61  GAESTQVIGLVSTGIG 76
           G     + GLVS G  
Sbjct: 185 G----YLQGLVSFGKA 196

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score =  224 bits (572), Expect = 7e-72
 Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 52/282 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKR-----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQI 171
           I+GG        PW  ++ R        + CGG++I   W+++A HC  + P        
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKK---EDY 57

Query: 172 NVTLKEHDLSRPSISTV--PVLRIMFHP--SHSCSSFNNDIALLEL----TRSIQWSDLI 223
            V L    L+  +   +   V  ++ H   S    + +NDIALL++     R  Q S  I
Sbjct: 58  IVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTI 117

Query: 224 RPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG 282
           +   LPS   D     S  + G+G  N           L+   + ++S++ CQ  +    
Sbjct: 118 QTISLPSMYNDPQFGTSCEITGFGKENSTDYLY--PEQLKMTVVKLISHRECQQPHYYGS 175

Query: 283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL 342
           +   V    +CA   Q   D+C                              Q DSGGPL
Sbjct: 176 E---VTTKMLCAADPQWKTDSC------------------------------QGDSGGPL 202

Query: 343 MLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
           +        + G+VS G GCA    PG+YTR++ ++ WI   
Sbjct: 203 VCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 244

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
              L+   + ++S++ CQ  +    +   V    +CA   Q   D+C  DSGGPL+    
Sbjct: 151 PEQLKMTVVKLISHRECQQPHYYGSE---VTTKMLCAADPQWKTDSCQGDSGGPLVCSLQ 207

Query: 63  ESTQVIGLVSTGIG 76
               + G+VS G G
Sbjct: 208 GRMTLTGIVSWGRG 221

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score =  222 bits (569), Expect = 2e-71
 Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 51/275 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG    P   P++V L       C G +I + W++TAAHC  N        +  V L 
Sbjct: 1   IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN-------KRSQVILG 53

Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H ++R   +   + V +   +P +  ++   D+ LL+LT   + +  +    LP    D
Sbjct: 54  AHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDD 113

Query: 235 YSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
               ++  VAGWG T+ +      S+ L++V ++++  +VC          + +  + +C
Sbjct: 114 VKPGTMCQVAGWGRTHNS---ASWSDTLREVEITIIDRKVCNDRNHYNFNPV-IGMNMVC 169

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           AG  +GG+D+C                                DSG PL+  G       
Sbjct: 170 AGSLRGGRDSC------------------------------NGDSGSPLLCEG----VFR 195

Query: 354 GLVSTGI--GCARPRLPGLYTRLT-RYIGWISDTL 385
           G+ S G+   C  PR PG+Y  L+ +++ WI  T+
Sbjct: 196 GVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 70.7 bits (174), Expect = 3e-14
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
             S+ L++V ++++  +VC          + +  + +CAG  +GG+D+C  DSG PL+  
Sbjct: 133 SWSDTLREVEITIIDRKVCNDRNHYNFNPV-IGMNMVCAGSLRGGRDSCNGDSGSPLLCE 191

Query: 61  GAESTQVIGLVSTGIGSP 78
           G       G+ S G+ + 
Sbjct: 192 G----VFRGVTSFGLENK 205

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score =  222 bits (568), Expect = 2e-71
 Identities = 71/277 (25%), Positives = 108/277 (38%), Gaps = 61/277 (22%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG   N  E   +V+     G FC GT+I+E+W++TAAHC          +   + L 
Sbjct: 1   VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCD--------NTNFQMKLG 52

Query: 177 EHDLSR--PSISTVPVLRIMFHPSH-SCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            H          T         P+  +    + DI L++L   +  S+ I P  LPS   
Sbjct: 53  VHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPS--- 109

Query: 234 DYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
             S  SV     + GWG       +    ++     ++++ + VCQA Y         + 
Sbjct: 110 --SPPSVGSVCHIMGWGSITP--IKVTYPDVPYCAYINLLDDAVCQAGYPEL----LTEY 161

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
             +CAG  +GGKD C                                DSGGPL+  G   
Sbjct: 162 RTLCAGILEGGKDTC------------------------------GGDSGGPLICNG--- 188

Query: 350 TQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
            Q  G+VS G   C +   PG+YT++  Y  WI   +
Sbjct: 189 -QFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSII 224

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 70.3 bits (173), Expect = 3e-14
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 8/73 (10%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            ++     ++++ + VCQA Y         +   +CAG  +GGKD C  DSGGPL+  G 
Sbjct: 134 PDVPYCAYINLLDDAVCQAGYPEL----LTEYRTLCAGILEGGKDTCGGDSGGPLICNG- 188

Query: 63  ESTQVIGLVSTGI 75
              Q  G+VS G 
Sbjct: 189 ---QFQGIVSFGA 198

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score =  222 bits (567), Expect = 3e-71
 Identities = 77/275 (28%), Positives = 117/275 (42%), Gaps = 56/275 (20%)

Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           +VGG   +PG  PW VSL+ R G HFCGG+++ EQWI+TA  C  +   P   +   V L
Sbjct: 1   VVGG---HPGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMP--LTGYEVWL 55

Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
                +     PS+  VPV +++  PS       + + LL+L RS+  +  +   CLP  
Sbjct: 56  GTLFQNPQHGEPSLQRVPVAKMVCGPS------GSQLVLLKLERSVTLNQRVALICLPPE 109

Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                      +AGWG T    +      +L    L+V+SNQ C   ++       V+ES
Sbjct: 110 WYVVPPGTKCEIAGWGETKGTGN----DTVLNVALLNVISNQECNIKHRGR-----VRES 160

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           +MC         AC                              + D GGPL      S 
Sbjct: 161 EMCTEGLLAPVGAC------------------------------EGDYGGPLACFTHNSW 190

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            + G++     CAR R P ++TR++ ++ WI   +
Sbjct: 191 VLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM 225

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 76.5 bits (189), Expect = 3e-16
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
             +L    L+V+SNQ C   ++       V+ES+MC         AC  D GGPL     
Sbjct: 133 DTVLNVALLNVISNQECNIKHRGR-----VRESEMCTEGLLAPVGACEGDYGGPLACFTH 187

Query: 63  ESTQVIGLVSTGIG 76
            S  + G++     
Sbjct: 188 NSWVLEGIIIPNRV 201

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score =  221 bits (565), Expect = 4e-71
 Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 57/275 (20%)

Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  A P   P++  L    +     CGG +I + +++TAAHC          S INV
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCW--------GSSINV 52

Query: 174 TLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           TL  H++    P+   +PV R + HP+++  +F+NDI LL+L R  + +  ++P  LPS 
Sbjct: 53  TLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSN 112

Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                     +VAGWG T      G+ S+ LQ+V ++V  ++ C++  +           
Sbjct: 113 KAQVKPGQTCSVAGWGQTAPL---GKHSHTLQEVKMTVQEDRKCESDLRHY----YDSTI 165

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           ++C G  +  K +                               + DSGGPL+       
Sbjct: 166 ELCVGDPEIKKTSF------------------------------KGDSGGPLVCNK---- 191

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              G+VS G     P  P   T+++ ++ WI  T+
Sbjct: 192 VAQGIVSYGRNNGMP--PRACTKVSSFVHWIKKTM 224

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 69.8 bits (172), Expect = 5e-14
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           + S+ LQ+V ++V  ++ C++  +           ++C G  +  K +   DSGGPL+  
Sbjct: 135 KHSHTLQEVKMTVQEDRKCESDLRHY----YDSTIELCVGDPEIKKTSFKGDSGGPLVCN 190

Query: 61  GAESTQVIGLVSTGIGSPT 79
                   G+VS G  +  
Sbjct: 191 K----VAQGIVSYGRNNGM 205

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score =  221 bits (565), Expect = 7e-71
 Identities = 64/279 (22%), Positives = 106/279 (37%), Gaps = 65/279 (23%)

Query: 117 IVGGLAANPGEFPWIVSL--KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           +VGG   N  E P++V+L         C G +I+ +W++TAAHC            I + 
Sbjct: 1   VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCD--------RRNIRIK 52

Query: 175 LKEHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           L  H  +  +      VP  +     +   +  + DI L+ L R + +S  I P  LPS 
Sbjct: 53  LGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPS- 111

Query: 232 SLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
                 + V     + GWG  +         ++     + +V ++ C+  Y         
Sbjct: 112 ----RSRGVGSRCRIMGWGKISTTTY----PDVPHCTNIFIVKHKWCEPLYPWV----PA 159

Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
               +CAG  +GG+D C                                DSGGPL+  G 
Sbjct: 160 DSRTLCAGILKGGRDTC------------------------------HGDSGGPLICNG- 188

Query: 348 ESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
              ++ G+V+ G   C +   P +YT++  Y  WI   +
Sbjct: 189 ---EMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSII 224

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 8/73 (10%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            ++     + +V ++ C+  Y             +CAG  +GG+D C  DSGGPL+  G 
Sbjct: 134 PDVPHCTNIFIVKHKWCEPLYPWV----PADSRTLCAGILKGGRDTCHGDSGGPLICNG- 188

Query: 63  ESTQVIGLVSTGI 75
              ++ G+V+ G 
Sbjct: 189 ---EMHGIVAGGS 198

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score =  221 bits (565), Expect = 7e-71
 Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 54/280 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A    +P  +SL+   G    H CGGT+I + W++TAAHC+             
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV------DRELTFR 54

Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACL 228
           V + EH+L++   +   V V +I+ HP       +   DIALL L +S+  +  ++   L
Sbjct: 55  VVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 114

Query: 229 PSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
           P      +  S   + GWG T  N   G+ +  LQ+  L  V   +C +          V
Sbjct: 115 PRAGTILANNSPCYITGWGLTRTN---GQLAQTLQQAYLPTVDYAICSSSSYWGST---V 168

Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
           K S +CAG + G +  C                              Q DSGGPL  L  
Sbjct: 169 KNSMVCAGGD-GVRSGC------------------------------QGDSGGPLHCLVN 197

Query: 348 ESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
               V G+ S  + +GC   R P ++TR++ YI WI++ +
Sbjct: 198 GQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           +  LQ+  L  V   +C +          VK S +CAG + G +  C  DSGGPL  L  
Sbjct: 142 AQTLQQAYLPTVDYAICSSSSYWGST---VKNSMVCAGGD-GVRSGCQGDSGGPLHCLVN 197

Query: 63  ESTQVIGLVS 72
               V G+ S
Sbjct: 198 GQYAVHGVTS 207

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score =  220 bits (563), Expect = 8e-71
 Identities = 55/272 (20%), Positives = 103/272 (37%), Gaps = 53/272 (19%)

Query: 119 GGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           GG   +  + PW V+++ + G     CGG I+ + +++TAAHC+ +         I +  
Sbjct: 2   GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFD----QKPETIVIQY 57

Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDL-IRPACLPSGSLD 234
           +  +L      + P +  ++   +   +  NDIA+LEL+R ++   L  +PA LP     
Sbjct: 58  ESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFR 117

Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
                 V V+G+G          + + L+   L+VV    C+  Y      I +     C
Sbjct: 118 PKTGSDVLVSGYGDGQTM---DPKDHDLKSAQLTVVDLDECRTKYGP----IFLSLQVFC 170

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
           A   + G                                    D+G P +        ++
Sbjct: 171 AQ--KVGVSLE------------------------------SGDAGDPTVQQD----TLV 194

Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+ +          P ++T++  Y+ WI D +
Sbjct: 195 GVAAYFPKRP-EGAPEVFTKVGSYVSWIQDII 225

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 69.5 bits (171), Expect = 7e-14
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 10/74 (13%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + L+   L+VV    C+  Y      I +     CA   + G      D+G P +    
Sbjct: 139 DHDLKSAQLTVVDLDECRTKYGP----IFLSLQVFCAQ--KVGVSLESGDAGDPTVQQD- 191

Query: 63  ESTQVIGLVSTGIG 76
               ++G+ +    
Sbjct: 192 ---TLVGVAAYFPK 202

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score =  220 bits (563), Expect = 1e-70
 Identities = 71/274 (25%), Positives = 112/274 (40%), Gaps = 53/274 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG+ A P  +P   +L     +FCGG++I  +WI+TAAHC+        A  ++V L 
Sbjct: 1   IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCM------DGAGFVDVVLG 54

Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H++     +  T+       H +++    +NDIA++ L   +  +  I    LPS  + 
Sbjct: 55  AHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDV- 113

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
                VT  GWG  +++      S++L++V + ++SN  C A Y        V +  +C 
Sbjct: 114 GVGTVVTPTGWGLPSDS--ALGISDVLRQVDVPIMSNADCDAVYGI------VTDGNICI 165

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
               GGK  C                                DSGGPL   G       G
Sbjct: 166 DST-GGKGTC------------------------------NGDSGGPLNYNG----LTYG 190

Query: 355 LVSTGIG-CARPRLPGLYTRLTRYIGWISDTLDI 387
           + S G         P  +TR+T ++ WI     I
Sbjct: 191 ITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQTGI 224

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score = 69.1 bits (170), Expect = 9e-14
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S++L++V + ++SN  C A Y        V +  +C     GGK  C  DSGGPL   G 
Sbjct: 135 SDVLRQVDVPIMSNADCDAVYGI------VTDGNICIDST-GGKGTCNGDSGGPLNYNG- 186

Query: 63  ESTQVIGLVSTGIG 76
                 G+ S G  
Sbjct: 187 ---LTYGITSFGAA 197

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score =  220 bits (564), Expect = 1e-70
 Identities = 74/280 (26%), Positives = 112/280 (40%), Gaps = 55/280 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A P  +PW +SL+   G    H CGG++I + W++TAAHC+       SA    
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCV------DSARTWR 54

Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACL 228
           V L EH+L+        + V  +  H        +   DIALL L      +  ++ A L
Sbjct: 55  VVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAAL 114

Query: 229 PSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
           P  +          + GWG T+     G  S+ L++  L  V +  C +          V
Sbjct: 115 PPSNQILPNNNPCYITGWGKTSTG---GPLSDSLKQAWLPSVDHATCSSSGWWGST---V 168

Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
           K + +CAG   G    C                                DSGGPL     
Sbjct: 169 KTTMVCAG--GGANSGC------------------------------NGDSGGPLNCQVN 196

Query: 348 ESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
            S  V G+ S  +  GC   + P ++TR++ YI W++  +
Sbjct: 197 GSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM 236

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 66.1 bits (162), Expect = 1e-12
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S+ L++  L  V +  C +          VK + +CAG   G    C  DSGGPL     
Sbjct: 142 SDSLKQAWLPSVDHATCSSSGWWGST---VKTTMVCAG--GGANSGCNGDSGGPLNCQVN 196

Query: 63  ESTQVIGLVS--TGIG 76
            S  V G+ S  +  G
Sbjct: 197 GSYYVHGVTSFVSSSG 212

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score =  218 bits (558), Expect = 4e-70
 Identities = 71/275 (25%), Positives = 117/275 (42%), Gaps = 59/275 (21%)

Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  + P   P++  L+     G   CGG ++ E +++TAAHC          S INV
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW--------GSNINV 52

Query: 174 TLKEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           TL  H++ R   +   +   R + HP ++  +  NDI LL+L+R ++ +  + P  LP  
Sbjct: 53  TLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRA 112

Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                  ++ TVAGWG  +        ++ L++V L V  ++ C   + S          
Sbjct: 113 QEGLRPGTLCTVAGWGRVSMRRG----TDTLREVQLRVQRDRQCLRIFGS-----YDPRR 163

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           Q+C G  +  K A                               + DSGGPL+       
Sbjct: 164 QICVGDRRERKAAF------------------------------KGDSGGPLLCNN---- 189

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              G+VS G     P  P ++TR++ ++ WI  T+
Sbjct: 190 VAHGIVSYGKSSGVP--PEVFTRVSSFLPWIRTTM 222

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 71.4 bits (176), Expect = 1e-14
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           R ++ L++V L V  ++ C   + S          Q+C G  +  K A   DSGGPL+  
Sbjct: 134 RGTDTLREVQLRVQRDRQCLRIFGS-----YDPRRQICVGDRRERKAAFKGDSGGPLLCN 188

Query: 61  GAESTQVIGLVSTGIGS 77
                   G+VS G  S
Sbjct: 189 N----VAHGIVSYGKSS 201

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score =  219 bits (560), Expect = 5e-70
 Identities = 86/281 (30%), Positives = 120/281 (42%), Gaps = 55/281 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A P  +PW VSL+        H CGGT++ + W++TAAHC+       S+    
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCI------SSSRTYR 54

Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACL 228
           V L  H LS   P    V V +++ H     +  S  NDIALL+L   +  +D I+  CL
Sbjct: 55  VVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCL 114

Query: 229 PSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
           P+            V GWG    N   G   +ILQ+  L VV    C            V
Sbjct: 115 PAAGTILPNNYVCYVTGWGRLQTN---GASPDILQQGQLLVVDYATCSKPGWWGST---V 168

Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
           K + +CAG + G   +C                                DSGGPL   GA
Sbjct: 169 KTNMICAGGD-GIISSC------------------------------NGDSGGPLNCQGA 197

Query: 348 EST-QVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
               QV G+VS  + +GC     P ++TR++ YI WI+  +
Sbjct: 198 NGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            +ILQ+  L VV    C            VK + +CAG + G   +C  DSGGPL   GA
Sbjct: 142 PDILQQGQLLVVDYATCSKPGWWGST---VKTNMICAGGD-GIISSCNGDSGGPLNCQGA 197

Query: 63  EST-QVIGLVS 72
               QV G+VS
Sbjct: 198 NGQWQVHGIVS 208

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score =  218 bits (558), Expect = 5e-70
 Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 56/274 (20%)

Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           I+ G   +    PW  +L  R    +CG  ++H QW++TAAHC              V L
Sbjct: 1   IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCR--------KKVFRVRL 52

Query: 176 KEHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
             + LS    S       ++ + HP +S    +ND+ L++L R I+ +  +RP  + S  
Sbjct: 53  GHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSS-H 111

Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
              +     V+GWG T           +LQ + +SV+S + C+  Y        + ++  
Sbjct: 112 CPSAGTKCLVSGWGTTKSPQVHF--PKVLQCLNISVLSQKRCEDAYPR-----QIDDTMF 164

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG +  G+D+C                              Q DSGGP++  G     +
Sbjct: 165 CAGDK-AGRDSC------------------------------QGDSGGPVVCNG----SL 189

Query: 353 IGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
            GLVS G   CARP  PG+YT L ++  WI +T+
Sbjct: 190 QGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETI 223

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 66.0 bits (162), Expect = 1e-12
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
             +LQ + +SV+S + C+  Y        + ++  CAG +  G+D+C  DSGGP++  G 
Sbjct: 135 PKVLQCLNISVLSQKRCEDAYPR-----QIDDTMFCAGDK-AGRDSCQGDSGGPVVCNG- 187

Query: 63  ESTQVIGLVSTG 74
               + GLVS G
Sbjct: 188 ---SLQGLVSWG 196

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score =  218 bits (557), Expect = 8e-70
 Identities = 63/272 (23%), Positives = 95/272 (34%), Gaps = 58/272 (21%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P +FP++ S++  G HFCGG +IH ++++TAA C        +     V L 
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCF----QSQNPGVSTVVLG 56

Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            +DL R          +  M    +      ND+ LL+L R    +  +    LP  +  
Sbjct: 57  AYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNAT 116

Query: 235 YSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
               +   VAGWG        GR S   + V ++V     C             + + +C
Sbjct: 117 VEAGTRCQVAGWGSQRSG---GRLSRFPRFVNVTVTPEDQC-------------RPNNVC 160

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
            G        C                                D G PL+  G       
Sbjct: 161 TGVLTRRGGIC------------------------------NGDGGTPLVCEG----LAH 186

Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+ S  +G      P  +TR+  +  WI   L
Sbjct: 187 GVASFSLGPCGRG-PDFFTRVALFRDWIDGVL 217

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 62.9 bits (154), Expect = 1e-11
 Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 17/76 (22%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           R S   + V ++V     C             + + +C G        C  D G PL+  
Sbjct: 136 RLSRFPRFVNVTVTPEDQC-------------RPNNVCTGVLTRRGGICNGDGGTPLVCE 182

Query: 61  GAESTQVIGLVSTGIG 76
           G       G+ S  +G
Sbjct: 183 G----LAHGVASFSLG 194

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score =  218 bits (558), Expect = 8e-70
 Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 64/283 (22%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG        PW V++     H CGG ++   W++TAAHC           Q  V L 
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCY--------VDQYEVWLG 52

Query: 177 EHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRSIQWSDLI 223
           ++ L +  PS     V +   HP               + F++D+ LL L++    +D++
Sbjct: 53  KNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVV 112

Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
           +P  LP+            +GWG     P++ ++ + LQ V ++++ N+ C   Y     
Sbjct: 113 KPIALPT-KEPKPGSKCLASGWGSI--TPTRWQKPDDLQCVFITLLPNENCAKVYLQ--- 166

Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
              V +  +CAG   GGKD C                              + DSGGPL+
Sbjct: 167 --KVTDVMLCAGEMGGGKDTC------------------------------RDDSGGPLI 194

Query: 344 LLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
             G     + G  S G + C +P +P +YT L ++  WI DT+
Sbjct: 195 CDG----ILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTM 233

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 9/72 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + LQ V ++++ N+ C   Y        V +  +CAG   GGKD C  DSGGPL+  G 
Sbjct: 144 PDDLQCVFITLLPNENCAKVYLQ-----KVTDVMLCAGEMGGGKDTCRDDSGGPLICDG- 197

Query: 63  ESTQVIGLVSTG 74
               + G  S G
Sbjct: 198 ---ILQGTTSYG 206

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score =  216 bits (553), Expect = 2e-69
 Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 60/273 (21%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P  +P++VSL+  GGHFCG T+I   ++++AAHC+    + ++   + V L 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCV----ANVNVRAVRVVLG 56

Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H+LSR  P+     V RI F   +   +  NDI +L+L  S   +  ++ A LP+    
Sbjct: 57  AHNLSRREPTRQVFAVQRI-FENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRR 115

Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
                     GWG    N      +++LQ++ ++VV++                + S +C
Sbjct: 116 LGNGVQCLAMGWGLLGRN---RGIASVLQELNVTVVTSL--------------CRRSNVC 158

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
                     C                                DSG PL+  G     + 
Sbjct: 159 TLVRGRQAGVC------------------------------FGDSGSPLVCNG----LIH 184

Query: 354 GLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           G+ S    GCA    P  +  + +++ WI   +
Sbjct: 185 GIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 55.2 bits (134), Expect = 4e-09
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 18/72 (25%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
             +++LQ++ ++VV++                + S +C          C+ DSG PL+  
Sbjct: 135 GIASVLQELNVTVVTSLC--------------RRSNVCTLVRGRQAGVCFGDSGSPLVCN 180

Query: 61  GAESTQVIGLVS 72
           G     + G+ S
Sbjct: 181 G----LIHGIAS 188

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score =  216 bits (552), Expect = 3e-69
 Identities = 70/276 (25%), Positives = 109/276 (39%), Gaps = 57/276 (20%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+ G    P   PW  +L +     CGG ++ ++W++TAAHC           + +V L 
Sbjct: 1   ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCK--------KQKYSVRLG 52

Query: 177 EHDLSR--PSISTVPVLRIMFHP---SHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           +H L         + V + + HP   + +    ++DI L+ L  S    D ++P  L + 
Sbjct: 53  DHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLAN- 111

Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                 Q   ++GWG       Q    N L    + + S   C+  Y  +     + E  
Sbjct: 112 LCPKVGQKCIISGWGTVTSP--QENFPNTLNCAEVKIYSQNKCERAYPGK-----ITEGM 164

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG    G D C                              Q DSGGPL+  G     
Sbjct: 165 VCAGSS-NGADTC------------------------------QGDSGGPLVCDG----M 189

Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLD 386
           + G+ S G   C +P  PG+YT++ RY  WI  T+D
Sbjct: 190 LQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTMD 225

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 66.4 bits (163), Expect = 7e-13
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 10/74 (13%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            N L    + + S   C+  Y  +     + E  +CAG    G D C  DSGGPL+  G 
Sbjct: 136 PNTLNCAEVKIYSQNKCERAYPGK-----ITEGMVCAGSS-NGADTCQGDSGGPLVCDG- 188

Query: 63  ESTQVIGLVSTGIG 76
               + G+ S G  
Sbjct: 189 ---MLQGITSWGSD 199

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score =  216 bits (553), Expect = 4e-69
 Identities = 69/294 (23%), Positives = 116/294 (39%), Gaps = 76/294 (25%)

Query: 110 ASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSAS 169
           A+      V          PW V++ R   + CGG ++   W++TAAHC           
Sbjct: 1   AAP----PVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCY--------ND 48

Query: 170 QINVTLKEHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRS 216
           +  V L +++     PS     V + + HP                 ++ND+ LL L++ 
Sbjct: 49  KYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKP 108

Query: 217 IQWSDLIRPACLPSGSLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQ 272
              +D+++P  LP+      E  +      +GWG T   P + +  + LQ V L ++ N+
Sbjct: 109 ADITDVVKPITLPT-----EEPKLGSTCLASGWGST--TPIKFKYPDDLQCVNLKLLPNE 161

Query: 273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDP 332
            C   ++       V ++ +CAG   GG   C                            
Sbjct: 162 DCDKAHEM-----KVTDAMLCAGEMDGGSYTC---------------------------- 188

Query: 333 PLQADSGGPLMLLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
             + DSGGPL+  G     + G+ S G   C  P  P +YT+L ++  WI +T+
Sbjct: 189 --EHDSGGPLICDG----ILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETM 236

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + LQ V L ++ N+ C   ++       V ++ +CAG   GG   C  DSGGPL+  G 
Sbjct: 147 PDDLQCVNLKLLPNEDCDKAHEM-----KVTDAMLCAGEMDGGSYTCEHDSGGPLICDG- 200

Query: 63  ESTQVIGLVSTGI 75
               + G+ S G 
Sbjct: 201 ---ILQGITSWGP 210

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score =  215 bits (551), Expect = 6e-69
 Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 58/275 (21%)

Query: 117 IVGGLAANPGEFPWIVSL---KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  A P   P++  L        H CGG ++ E +++TAAHCL         S INV
Sbjct: 1   IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCL--------GSSINV 52

Query: 174 TLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           TL  H++     +   +PV R + HP ++  +  NDI LL+LTR    +D + P  LP  
Sbjct: 53  TLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRS 112

Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
             +     + +VAGWG    N      ++ LQ+V L V S + C A +++      +  +
Sbjct: 113 LAEVKPGMMCSVAGWGRLGVN---MPSTDKLQEVDLEVQSEEKCIARFKN-----YIPFT 164

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
           Q+CAG     K++                                 DSGGPL+  G    
Sbjct: 165 QICAGDPSKRKNSF------------------------------SGDSGGPLVCNG---- 190

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              G+VS G        P +YTR++ ++ WI  T+
Sbjct: 191 VAQGIVSYGRNDGTT--PDVYTRISSFLSWIHSTM 223

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 74.1 bits (183), Expect = 1e-15
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
             ++ LQ+V L V S + C A +++      +  +Q+CAG     K++   DSGGPL+  
Sbjct: 135 PSTDKLQEVDLEVQSEEKCIARFKN-----YIPFTQICAGDPSKRKNSFSGDSGGPLVCN 189

Query: 61  GAESTQVIGLVSTGIGSPT 79
           G       G+VS G    T
Sbjct: 190 G----VAQGIVSYGRNDGT 204

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score =  214 bits (548), Expect = 2e-68
 Identities = 65/284 (22%), Positives = 103/284 (36%), Gaps = 66/284 (23%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG        PW V++   G   CGG ++H QW++TAAHC+        +    + L 
Sbjct: 1   IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCM--------SDDYQIWLG 52

Query: 177 EHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRSIQWSDLI 223
            H+LS+   +     V      P                  ++D+ LL L +  + +D +
Sbjct: 53  RHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAV 112

Query: 224 RPACLPSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG 282
           +   LP+   +    S    +GWG    +    R S  LQ V L + SN+ C   Y    
Sbjct: 113 KILDLPTQ--EPKLGSTCYTSGWGLI--STFTNRGSGTLQCVELRLQSNEKCARAYPE-- 166

Query: 283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL 342
               + E  +CA H       C                                DSGG L
Sbjct: 167 ---KMTEFVLCATHRDDSGSIC------------------------------LGDSGGAL 193

Query: 343 MLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           +  G       G+ S G   CA      ++T++  +  WI +T+
Sbjct: 194 ICDG----VFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETI 233

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 9/76 (11%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           R S  LQ V L + SN+ C   Y        + E  +CA H       C  DSGG L+  
Sbjct: 142 RGSGTLQCVELRLQSNEKCARAYPE-----KMTEFVLCATHRDDSGSICLGDSGGALICD 196

Query: 61  GAESTQVIGLVSTGIG 76
           G       G+ S G  
Sbjct: 197 G----VFQGITSWGYS 208

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score =  214 bits (548), Expect = 2e-68
 Identities = 74/288 (25%), Positives = 109/288 (37%), Gaps = 73/288 (25%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        PW  +L       CGG ++H QW++TAAHC+        +    + L 
Sbjct: 1   IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCI--------SDNYQLWLG 52

Query: 177 EHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRSIQW-SDL 222
            H+L     +   V V     HP             +   +++D+ LL LT      +D 
Sbjct: 53  RHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDA 112

Query: 223 IRPACLPSGSLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
           ++   LP+      E  V      +GWG     P      + LQ V L ++ N  C+  +
Sbjct: 113 VKVVELPT-----EEPEVGSTCLASGWGSI--EPENFSFPDDLQCVDLKILPNDECKKAH 165

Query: 279 QSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
                   V +  +C GH +GGKD C                                DS
Sbjct: 166 VQ-----KVTDFMLCVGHLEGGKDTC------------------------------VGDS 190

Query: 339 GGPLMLLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           GGPLM  G     + G+ S G + C  P  P +  R+  Y+ WI DT+
Sbjct: 191 GGPLMCDG----VLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTI 234

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 72.6 bits (179), Expect = 6e-15
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 9/72 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + LQ V L ++ N  C+  +        V +  +C GH +GGKD C  DSGGPLM  G 
Sbjct: 145 PDDLQCVDLKILPNDECKKAHVQ-----KVTDFMLCVGHLEGGKDTCVGDSGGPLMCDG- 198

Query: 63  ESTQVIGLVSTG 74
               + G+ S G
Sbjct: 199 ---VLQGVTSWG 207

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score =  214 bits (546), Expect = 4e-68
 Identities = 79/287 (27%), Positives = 111/287 (38%), Gaps = 72/287 (25%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        PW V +   G   CGG ++H QW++TAAHC+         ++  + L 
Sbjct: 1   IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCI--------RNKSVILLG 52

Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNN-----------DIALLELTRSIQWSDLI 223
            H L  P  +     V     HP +  S   N           D+ LL L+   + +D +
Sbjct: 53  RHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAV 112

Query: 224 RPACLPSGSLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
           +   LP+      E ++      +GWG     P +      LQ V L V+SN VC   + 
Sbjct: 113 KVMDLPT-----QEPALGTTCYASGWGSI--EPEEFLTPKKLQCVDLHVISNDVCAQVHP 165

Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
                  V +  +CAG   GGK  C                                DSG
Sbjct: 166 Q-----KVTKFMLCAGRWTGGKSTC------------------------------SGDSG 190

Query: 340 GPLMLLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
           GPL+  G     + G+ S G   CA P  P LYT++  Y  WI DT+
Sbjct: 191 GPLVCNG----VLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTI 233

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
              LQ V L V+SN VC   +        V +  +CAG   GGK  C  DSGGPL+  G 
Sbjct: 144 PKKLQCVDLHVISNDVCAQVHPQ-----KVTKFMLCAGRWTGGKSTCSGDSGGPLVCNG- 197

Query: 63  ESTQVIGLVSTGI 75
               + G+ S G 
Sbjct: 198 ---VLQGITSWGS 207

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score =  224 bits (571), Expect = 4e-68
 Identities = 85/297 (28%), Positives = 128/297 (43%), Gaps = 54/297 (18%)

Query: 98  SPIAGVPCG-RSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAA 156
           S +  + CG ++    R  +IVGG  A  G+ PW V++K   G  CGG  I   WI+TAA
Sbjct: 302 SLLPKLSCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAA 361

Query: 157 HCLCNGPSPLSASQINVTLKEHDLSRPSIS---TVPVLRIMFHPSHSCSSFNNDIALLEL 213
           HCL    +     +  +     D   P +       V RI+FH +++  ++ NDIAL+E+
Sbjct: 362 HCLRASKTH----RYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEM 417

Query: 214 TRSIQWSDL----IRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSV 268
            +     D       PAC+P     +    +  V+GWG   +N         LQ   + +
Sbjct: 418 KKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNER----VFSLQWGEVKL 473

Query: 269 VSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGV 328
           +SN  C  +Y +       ++   CAG   G  DAC                        
Sbjct: 474 ISN--CSKFYGNR----FYEKEMECAGTYDGSIDAC------------------------ 503

Query: 329 HWDPPLQADSGGPLMLLGAEST-QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
                 + DSGGPL+ + A +   V G+VS G  C +P  PG+YT++  Y  WIS  
Sbjct: 504 ------KGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYH 554

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 65.7 bits (160), Expect = 8e-12
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 2   RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG 61
           R   LQ   + ++SN  C  +Y +       ++   CAG   G  DAC  DSGGPL+ + 
Sbjct: 462 RVFSLQWGEVKLISN--CSKFYGNR----FYEKEMECAGTYDGSIDACKGDSGGPLVCMD 515

Query: 62  AEST-QVIGLVSTGIG 76
           A +   V G+VS G  
Sbjct: 516 ANNVTYVWGVVSWGEN 531

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score =  212 bits (543), Expect = 8e-68
 Identities = 70/276 (25%), Positives = 111/276 (40%), Gaps = 60/276 (21%)

Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG    P   P++  L+         FCGG +I   +++TAAHC            I 
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA--------GRSIT 52

Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H+++    +   + V++   HP ++ S+ ++DI LL+L      +  +     PS
Sbjct: 53  VTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPS 112

Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
                    +  VAGWG T         S+ LQ+V L ++  Q C  +            
Sbjct: 113 QFNFVPPGRMCRVAGWGRTGVL---KPGSDTLQEVKLRLMDPQACSHFRDF------DHN 163

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
            Q+C G+ +  K A                               + DSGGPL+  G   
Sbjct: 164 LQLCVGNPRKTKSAF------------------------------KGDSGGPLLCAG--- 190

Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
               G+VS G   A+P  P ++TR++ Y  WI+  L
Sbjct: 191 -VAQGIVSYGRSDAKP--PAVFTRISHYRPWINQIL 223

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 69.5 bits (171), Expect = 7e-14
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 10/79 (12%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
             S+ LQ+V L ++  Q C  +             Q+C G+ +  K A   DSGGPL+  
Sbjct: 136 PGSDTLQEVKLRLMDPQACSHFRDF------DHNLQLCVGNPRKTKSAFKGDSGGPLLCA 189

Query: 61  GAESTQVIGLVSTGIGSPT 79
           G       G+VS G     
Sbjct: 190 G----VAQGIVSYGRSDAK 204

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score =  212 bits (543), Expect = 1e-67
 Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 60/277 (21%)

Query: 117 IVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG+ + P   P++  L    ++     CGG +I  Q+++TAAHC           +I 
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK--------GREIT 52

Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           V L  HD+ +   +   + V + + H S++     +DI LL+L + ++ +  +    LPS
Sbjct: 53  VILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPS 112

Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            S      ++   AGWG T         S  L++V L ++  + C  +           +
Sbjct: 113 PSDFIHPGAMCWAAGWGKTGVR---DPTSYTLREVELRIMDEKACVDYRY------YEYK 163

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
            Q+C G     + A                                 DSGGPL+  G   
Sbjct: 164 FQVCVGSPTTLRAAF------------------------------MGDSGGPLLCAG--- 190

Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
               G+VS G   A+P  P ++TR++ Y+ WI+  ++
Sbjct: 191 -VAHGIVSYGHPDAKP--PAIFTRVSTYVPWINAVIN 224

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 66.0 bits (162), Expect = 1e-12
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 10/79 (12%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
             S  L++V L ++  + C  +           + Q+C G     + A   DSGGPL+  
Sbjct: 136 PTSYTLREVELRIMDEKACVDYRY------YEYKFQVCVGSPTTLRAAFMGDSGGPLLCA 189

Query: 61  GAESTQVIGLVSTGIGSPT 79
           G       G+VS G     
Sbjct: 190 G----VAHGIVSYGHPDAK 204

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score =  211 bits (541), Expect = 2e-67
 Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 58/276 (21%)

Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG   +P   P++   +         FCGG ++ +++++TAAHC            + 
Sbjct: 1   IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK--------GRSMT 52

Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
           VTL  H++     +   +PV + + HP ++    +NDI LL+L R+ + +  +RP  LP 
Sbjct: 53  VTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPR 112

Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
            +          VAGWG    +   G     L +V L+V  +QVC++ +QS       + 
Sbjct: 113 RNAHVKPGDECYVAGWGKVTPD---GEFPKTLHEVKLTVQKDQVCESQFQSS----YNRA 165

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           +++C G  +    +                               + DSGGPL+      
Sbjct: 166 NEICVGDSKIKGASF------------------------------EEDSGGPLVCKR--- 192

Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
               G+VS G        P ++TR+  ++ WI  T+
Sbjct: 193 -AAAGIVSYGQTDGSA--PQVFTRVLSFVSWIKKTM 225

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 70.6 bits (174), Expect = 3e-14
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
                L +V L+V  +QVC++ +QS       + +++C G  +    +   DSGGPL+  
Sbjct: 136 EFPKTLHEVKLTVQKDQVCESQFQSS----YNRANEICVGDSKIKGASFEEDSGGPLVCK 191

Query: 61  GAESTQVIGLVSTGIGSPT 79
                   G+VS G    +
Sbjct: 192 R----AAAGIVSYGQTDGS 206

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score =  212 bits (541), Expect = 3e-67
 Identities = 76/287 (26%), Positives = 116/287 (40%), Gaps = 74/287 (25%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        PW V++     + CGG +I   W++TAAHC         ++   V L 
Sbjct: 1   IVGGYKCEKNSQPWQVAV--INEYLCGGVLIDPSWVITAAHCY--------SNNYQVLLG 50

Query: 177 EHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRSIQWSDLI 223
            ++L +  P      V +   HP                  +ND+ LL L+     +  +
Sbjct: 51  RNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGV 110

Query: 224 RPACLPSGSLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
           +   LP+      E  V      +GWG T  NPS+   S+ LQ V + ++SN+ C   Y+
Sbjct: 111 KVIDLPT-----KEPKVGSTCLASGWGST--NPSEMVVSHDLQCVNIHLLSNEKCIETYK 163

Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
                 NV +  +CAG  +GGKD C                                DSG
Sbjct: 164 D-----NVTDVMLCAGEMEGGKDTC------------------------------AGDSG 188

Query: 340 GPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           GPL+  G     + G+ S G   CA+P+ P +Y +L ++  WI   +
Sbjct: 189 GPLICDG----VLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVM 231

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 72.6 bits (179), Expect = 5e-15
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 9/74 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S+ LQ V + ++SN+ C   Y+      NV +  +CAG  +GGKD C  DSGGPL+  G 
Sbjct: 142 SHDLQCVNIHLLSNEKCIETYKD-----NVTDVMLCAGEMEGGKDTCAGDSGGPLICDG- 195

Query: 63  ESTQVIGLVSTGIG 76
               + G+ S G  
Sbjct: 196 ---VLQGITSGGAT 206

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score =  211 bits (540), Expect = 4e-67
 Identities = 76/280 (27%), Positives = 115/280 (41%), Gaps = 58/280 (20%)

Query: 120 GLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           G  A P  + W VSL+        H CGG++I   W+VTA HC+       ++    V L
Sbjct: 2   GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCI------STSRTYQVVL 55

Query: 176 KEHDLSRPSIS----TVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACLP 229
            E+D S    S     +    +  HP    +C +  NDIAL++L+RS Q  D ++ A LP
Sbjct: 56  GEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLP 115

Query: 230 SGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
                        ++GWG        G   + LQ+  L  V  + C  W         VK
Sbjct: 116 PAGDILPNEAPCYISGWGRLYTG---GPLPDKLQQALLPTVDYEHCSQWDWWGIT---VK 169

Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           ++ +CAG     +  C                                DSGGPL    A+
Sbjct: 170 KTMVCAGG--DTRSGC------------------------------NGDSGGPLNCPAAD 197

Query: 349 ST-QVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
            + QV G+ S  +  GC   + P ++TR++ +I WI +T+
Sbjct: 198 GSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETI 237

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + LQ+  L  V  + C  W         VK++ +CAG     +  C  DSGGPL    A
Sbjct: 142 PDKLQQALLPTVDYEHCSQWDWWGIT---VKKTMVCAGG--DTRSGCNGDSGGPLNCPAA 196

Query: 63  EST-QVIGLVSTGIG 76
           + + QV G+ S    
Sbjct: 197 DGSWQVHGVTSFVSA 211

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score =  208 bits (533), Expect = 3e-66
 Identities = 75/280 (26%), Positives = 114/280 (40%), Gaps = 61/280 (21%)

Query: 117 IVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+ G  A  G FP+   L    +     +CGG++I  +WI+TAAHC+        A  + 
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCV------HDAVSVV 54

Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
           V L            V   RI+ H   +  ++ ND+AL+++   ++++D I+P  LPSG 
Sbjct: 55  VYLGSAVQYEGEA-VVNSERIISHSMFNPDTYLNDVALIKI-PHVEYTDNIQPIRLPSGE 112

Query: 233 L---DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
                +     TV+GWG +N +      + ILQ     V+ N  C   Y        + E
Sbjct: 113 ELNNKFENIWATVSGWGQSNTD------TVILQYTYNLVIDNDRCAQEYPPGI----IVE 162

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
           S +C      GK  C                                DSGGP +L     
Sbjct: 163 STICGDTS-DGKSPC------------------------------FGDSGGPFVLSD--K 189

Query: 350 TQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
             +IG+VS  +G GC     P  ++R+T Y+ WI     I
Sbjct: 190 NLLIGVVSFVSGAGCE-SGKPVGFSRVTSYMDWIQQNTGI 228

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score = 67.6 bits (166), Expect = 3e-13
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + ILQ     V+ N  C   Y        + ES +C      GK  C+ DSGGP +L   
Sbjct: 135 TVILQYTYNLVIDNDRCAQEYPPGI----IVESTICGDTS-DGKSPCFGDSGGPFVLSD- 188

Query: 63  ESTQVIGLVSTGIG 76
               +IG+VS   G
Sbjct: 189 -KNLLIGVVSFVSG 201

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score =  209 bits (535), Expect = 8e-66
 Identities = 52/289 (17%), Positives = 83/289 (28%), Gaps = 56/289 (19%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGP 163
           C                A +  + PW V L    G  FCGG II E +++T A C     
Sbjct: 41  CVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCS---- 96

Query: 164 SPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI 223
             L    I V    +  S+  +  + +  +  H  +   +  ND++LLEL   IQ     
Sbjct: 97  --LLHRNITVKTYFNRTSQDPL-MIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAG 153

Query: 224 RPACLPS----GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
            P C P       L        ++GW             N L    +++V  + C     
Sbjct: 154 LPVCTPEKDFAEHLLIPRTRGLLSGWARNG-----TDLGNSLTTRPVTLVEGEECGQVLN 208

Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
                  V     C         A                                   G
Sbjct: 209 V-----TVTTRTYCER---SSVAAM------------------------------HWMDG 230

Query: 340 GPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
             +      S  + G++ +           L T+++RY  W    ++ H
Sbjct: 231 SVVTREHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQIMNAH 278

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 8/70 (11%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            N L    +++V  + C            V     C         A     G  +     
Sbjct: 187 GNSLTTRPVTLVEGEECGQVLNV-----TVTTRTYCER---SSVAAMHWMDGSVVTREHR 238

Query: 63  ESTQVIGLVS 72
            S  + G++ 
Sbjct: 239 GSWFLTGVLG 248

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score =  203 bits (520), Expect = 2e-64
 Identities = 68/276 (24%), Positives = 107/276 (38%), Gaps = 63/276 (22%)

Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A P   P++ SL+     G HFCGGT+IH  +++TAAHCL      +    +NV
Sbjct: 1   IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCL----RDIPQRLVNV 56

Query: 174 TLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
            L  H++    P+     V ++  +   +  +  NDI L++L+     S  +    LP  
Sbjct: 57  VLGAHNVRTQEPTQQHFSVAQVFLNNYDA-ENKLNDILLIQLSSPANLSASVATVQLPQQ 115

Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
                  +     GWG    +      + +LQ++ ++VV+                 +  
Sbjct: 116 DQPVPHGTQCLAMGWGRVGAH---DPPAQVLQELNVTVVTFF--------------CRPH 158

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            +C    +     C                                DSGGPL+  G    
Sbjct: 159 NICTFVPRRKAGIC------------------------------FGDSGGPLICDG---- 184

Query: 351 QVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
            + G+ S  I GCA    P  +TR+  Y+ WI  TL
Sbjct: 185 IIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 18/70 (25%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + +LQ++ ++VV+                 +   +C    +     C+ DSGGPL+  G 
Sbjct: 140 AQVLQELNVTVVTFFC--------------RPHNICTFVPRRKAGICFGDSGGPLICDG- 184

Query: 63  ESTQVIGLVS 72
               + G+ S
Sbjct: 185 ---IIQGIDS 191

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score =  206 bits (527), Expect = 3e-64
 Identities = 52/297 (17%), Positives = 84/297 (28%), Gaps = 56/297 (18%)

Query: 95  GGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIV 153
           G         C                A +  + PW V L    G  FCGG II E +++
Sbjct: 72  GYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVL 131

Query: 154 TAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLEL 213
           T A C       L    I V    +  S+  +  + +  +  H  +   +  ND++LLEL
Sbjct: 132 TTAKCS------LLHRNITVKTYFNRTSQDPL-MIKITHVHVHMRYDADAGENDLSLLEL 184

Query: 214 TRSIQWSDLIRPACLP----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV 269
              IQ      P C P    +  L        ++GW             N L    +++V
Sbjct: 185 EWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG-----TDLGNSLTTRPVTLV 239

Query: 270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVH 329
             + C            V     C         A                          
Sbjct: 240 EGEECGQVLNV-----TVTTRTYCER---SSVAAM------------------------- 266

Query: 330 WDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
                    G  +      S  + G++ +           L T+++RY  W    ++
Sbjct: 267 -----HWMDGSVVTREHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQIMN 317

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 8/70 (11%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            N L    +++V  + C            V     C         A     G  +     
Sbjct: 228 GNSLTTRPVTLVEGEECGQVLNV-----TVTTRTYCER---SSVAAMHWMDGSVVTREHR 279

Query: 63  ESTQVIGLVS 72
            S  + G++ 
Sbjct: 280 GSWFLTGVLG 289

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score =  200 bits (509), Expect = 1e-59
 Identities = 60/334 (17%), Positives = 98/334 (29%), Gaps = 90/334 (26%)

Query: 97  SSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAA 156
            S +    CG           +   A++    PW V++K      C G +I +QW++TAA
Sbjct: 212 VSKLTDTICGVG--------NMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAA 263

Query: 157 HCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS---------HSCSSFNND 207
           HC  +G      S   V + +            + + +  P               + +D
Sbjct: 264 HCFRDGNDH---SLWRVNVGDPKSQ--WGKEFLIEKAVISPGFDVFAKKNQGILEFYGDD 318

Query: 208 IALLELTRSIQWSDLIRPACLPSGSLDYSE------QSVTVAGWGWTNENPSQGRRSNIL 261
           IALL+L + ++ S   RP CLP               +         N+          L
Sbjct: 319 IALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPA-HFVAL 377

Query: 262 QKVALSV-----VSNQVCQAWYQSEGKKIN--------VKESQMCAGHEQGGKDACWVSR 308
               L++     V    C      E             V +  +C+G +   +  C    
Sbjct: 378 NGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQ-EDESPC---- 432

Query: 309 QWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI-----GCA 363
                                     + +SGG + L        +GLVS G+     G A
Sbjct: 433 --------------------------KGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSA 466

Query: 364 R------------PRLPGLYTRLTRYIGWISDTL 385
                        P     +  L R   W+   L
Sbjct: 467 DKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHL 500

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 14/87 (16%)

Query: 5   ILQKVALSV-----VSNQVCQAWYQSEGKKIN--------VKESQMCAGHEQGGKDACWA 51
            L    L++     V    C      E             V +  +C+G +   +  C  
Sbjct: 376 ALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQ-EDESPCKG 434

Query: 52  DSGGPLMLLGAESTQVIGLVSTGIGSP 78
           +SGG + L        +GLVS G+ +P
Sbjct: 435 ESGGAVFLERRFRFFQVGLVSWGLYNP 461

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score =  204 bits (520), Expect = 3e-59
 Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 50/286 (17%)

Query: 104 PCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCLCNG 162
              +    +  G++VGG  A+P  +PW VSL+   G HFCGGT+I  +W++TAAHCL   
Sbjct: 549 GKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKS 608

Query: 163 PSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWS 220
           P P   S   V L  H      P +  + V R+   P+        DIALL+L+     +
Sbjct: 609 PRP---SSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVIT 659

Query: 221 DLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
           D + PACLPS +   ++     + GWG T         + +L++  L V+ N+VC  +  
Sbjct: 660 DKVIPACLPSPNYVVADRTECFITGWGETQGTFG----AGLLKEAQLPVIENKVCNRYEF 715

Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
             G+   V+ +++CAGH  GG D+C                              Q DSG
Sbjct: 716 LNGR---VQSTELCAGHLAGGTDSC------------------------------QGDSG 742

Query: 340 GPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           GPL+    +   + G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 743 GPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 788

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 72.0 bits (176), Expect = 9e-14
 Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + +L++  L V+ N+VC  +    G+   V+ +++CAGH  GG D+C  DSGGPL+    
Sbjct: 694 AGLLKEAQLPVIENKVCNRYEFLNGR---VQSTELCAGHLAGGTDSCQGDSGGPLVCFEK 750

Query: 63  ESTQVIGLVSTGIG 76
           +   + G+ S G+G
Sbjct: 751 DKYILQGVTSWGLG 764

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score =  191 bits (487), Expect = 2e-56
 Identities = 50/326 (15%), Positives = 93/326 (28%), Gaps = 92/326 (28%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLC 160
           CG     R+          +  + PW   +       G   C G ++ E +++TAAHC  
Sbjct: 211 CGMVWEHRK--------GTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFT 262

Query: 161 NGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS---------HSCSSFNNDIALL 211
                     I V++              +  ++FHP+              ++ D+AL+
Sbjct: 263 VDDKE---HSIKVSVGGEKRDL------EIEVVLFHPNYNINGKKEAGIPEFYDYDVALI 313

Query: 212 ELTRSIQWSDLIRPACLPSGSLDYSEQSV-TVAGWGWTNE---------NPSQGRRSNIL 261
           +L   +++   IRP CLP          +          E                   L
Sbjct: 314 KLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKL 373

Query: 262 QKVALSVVSNQ---VCQAWYQSEGKKIN-------VKESQMCAGHEQG--GKDACWVSRQ 309
            +  + + +      C+   Q              V    +C G        + C     
Sbjct: 374 TRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTC----- 428

Query: 310 WWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI--GCARP-- 365
                                    + DSGGPL++        +G++S G+   C     
Sbjct: 429 -------------------------RGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKR 463

Query: 366 ------RLPGLYTRLTRYIGWISDTL 385
                      +  L + + W+ + L
Sbjct: 464 QKQVPAHARDFHINLFQVLPWLKEKL 489

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 59.2 bits (143), Expect = 8e-10
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 12/86 (13%)

Query: 3   SNILQKVALSVVSNQ---VCQAWYQSEGKKIN-------VKESQMCAGHEQG--GKDACW 50
              L +  + + +      C+   Q              V    +C G        + C 
Sbjct: 370 EKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCR 429

Query: 51  ADSGGPLMLLGAESTQVIGLVSTGIG 76
            DSGGPL++        +G++S G+ 
Sbjct: 430 GDSGGPLIVHKRSRFIQVGVISWGVV 455

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score =  171 bits (435), Expect = 1e-47
 Identities = 49/327 (14%), Positives = 92/327 (28%), Gaps = 92/327 (28%)

Query: 104 PCGRSLASRRTGKIVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCL 159
            CG     R+             + PW   +       G   C G ++ E +++TAAHC 
Sbjct: 452 LCGMVWEHRKGTD--------YHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCF 503

Query: 160 CNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS---------HSCSSFNNDIAL 210
                      I V++              +  ++FHP+              ++ D+AL
Sbjct: 504 TVDDKE---HSIKVSVGGEKRDL------EIEVVLFHPNYNINGKKEAGIPEFYDYDVAL 554

Query: 211 LELTRSIQWSDLIRPACLPSGSLDYSEQSVT------VAGWG----WTNENPSQGRRSNI 260
           ++L   +++   IRP CLP          +                   +          
Sbjct: 555 IKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKK 614

Query: 261 LQKVALSVVSN---QVCQAWYQSEGKKIN-------VKESQMCAGHEQG--GKDACWVSR 308
           L +  + + +      C+   Q              V    +C G        + C    
Sbjct: 615 LTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTC---- 670

Query: 309 QWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI--GCARP- 365
                                     + DSGGPL++        +G++S G+   C    
Sbjct: 671 --------------------------RGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQK 704

Query: 366 -------RLPGLYTRLTRYIGWISDTL 385
                       +  L + + W+ + L
Sbjct: 705 RQKQVPAHARDFHINLFQVLPWLKEKL 731

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 12/86 (13%)

Query: 3   SNILQKVALSVVSN---QVCQAWYQSEGKKIN-------VKESQMCAGHEQG--GKDACW 50
              L +  + + +      C+   Q              V    +C G        + C 
Sbjct: 612 EKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCR 671

Query: 51  ADSGGPLMLLGAESTQVIGLVSTGIG 76
            DSGGPL++        +G++S G+ 
Sbjct: 672 GDSGGPLIVHKRSRFIQVGVISWGVV 697

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ... Length = 131

 Score =  141 bits (358), Expect = 2e-41
 Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 11/136 (8%)

Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IV G  A PG +PW VSL+ + G HFCGG++I+E W+VTAAHC          +   V  
Sbjct: 1   IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCG-------VTTSDVVVA 53

Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            E D       I  + + ++  +  ++  + NNDI LL+L+ +  +S  +   CLPS S 
Sbjct: 54  GEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASD 113

Query: 234 DYSE-QSVTVAGWGWT 248
           D++   +    GWG T
Sbjct: 114 DFAAGTTCVTTGWGLT 129

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score =  138 bits (349), Expect = 8e-40
 Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 41/184 (22%)

Query: 203 SFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQ 262
            +++D+ LL L    + +D ++   LP+        +   +GWG     P      + +Q
Sbjct: 5   DYSHDLMLLRLQSPAKITDAVKVLELPT-QEPELGSTCEASGWGSIEPGPDDFEFPDEIQ 63

Query: 263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYP 322
            V L+++ N  C   +  +     V ES +CAG+  GGKD C                  
Sbjct: 64  CVQLTLLQNTFCADAHPDK-----VTESMLCAGYLPGGKDTC------------------ 100

Query: 323 SHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWI 381
                         DSGGPL+  G       G+ S G   C     P +YT+L  Y+ WI
Sbjct: 101 ------------MGDSGGPLICNG----MWQGITSWGHTPCGSANKPSIYTKLIFYLDWI 144

Query: 382 SDTL 385
            DT+
Sbjct: 145 DDTI 148

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score = 70.3 bits (173), Expect = 7e-15
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 9/74 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + +Q V L+++ N  C   +  +     V ES +CAG+  GGKD C  DSGGPL+  G 
Sbjct: 59  PDEIQCVQLTLLQNTFCADAHPDK-----VTESMLCAGYLPGGKDTCMGDSGGPLICNG- 112

Query: 63  ESTQVIGLVSTGIG 76
                 G+ S G  
Sbjct: 113 ---MWQGITSWGHT 123

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ... Length = 97

 Score =  100 bits (251), Expect = 3e-26
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 37/131 (28%)

Query: 255 GRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPH 314
               + LQ+ +L ++SN  C+ ++ ++     +K++ +CAG    G  +C          
Sbjct: 1   ANTPDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSC---------- 43

Query: 315 VARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRL 374
                                 DSGGPL+     +  ++G+VS G        PG+Y R+
Sbjct: 44  --------------------MGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARV 83

Query: 375 TRYIGWISDTL 385
           T  + W+  TL
Sbjct: 84  TALVNWVQQTL 94

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ... Length = 97

 Score = 74.5 bits (184), Expect = 7e-17
 Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 7/74 (9%)

Query: 3  SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           + LQ+ +L ++SN  C+ ++ ++     +K++ +CAG    G  +C  DSGGPL+    
Sbjct: 4  PDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSCMGDSGGPLVCKKN 56

Query: 63 ESTQVIGLVSTGIG 76
           +  ++G+VS G  
Sbjct: 57 GAWTLVGIVSWGSS 70

>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A Length = 80

 Score = 93.3 bits (233), Expect = 6e-24
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG        PW V++  +    CGG +++ +W++TAAHC              V L 
Sbjct: 1   IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCK--------NDNYEVWLG 52

Query: 177 EHDLSR--PSISTVPVLRIMFHPS 198
            H+L     +     V     HP 
Sbjct: 53  RHNLFENENTAQFFGVTADFPHPG 76

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A Length = 215

 Score = 68.5 bits (167), Expect = 1e-13
 Identities = 34/261 (13%), Positives = 84/261 (32%), Gaps = 65/261 (24%)

Query: 123 ANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS 181
           AN    P+        GG  C GT+I    I+T  HC+ N  S   +++ +V    +D +
Sbjct: 12  ANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDST 71

Query: 182 RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVT 241
             + S       +     +  +   D A+++   +I   + +    +   + + +  ++ 
Sbjct: 72  AVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI--GNTVGYRSIRQVT-NLTGTTIK 128

Query: 242 VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGK 301
           ++G+     +  +        +++ SV       A+Y  +            +G      
Sbjct: 129 ISGYPG---DKMRSTGKVSQWEMSGSVTREDTNLAYYTID----------TFSG------ 169

Query: 302 DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG 361
                                              +SG  ++    ++ Q++G+ + G  
Sbjct: 170 -----------------------------------NSGSAML---DQNQQIVGVHNAGYS 191

Query: 362 CARPRLPGLYTRLT-RYIGWI 381
                      + T  ++ +I
Sbjct: 192 NGT---INGGPKATAAFVEFI 209

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A Length = 274

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 20/206 (9%), Positives = 59/206 (28%), Gaps = 25/206 (12%)

Query: 124 NPGEFPW-----IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
           +     +     I      G     G ++ +  ++T  H +           +       
Sbjct: 13  DTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGD--PHALKAFPSAI 70

Query: 179 DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ---WSDLIRPACLPSGSLDY 235
           +            +I  +          D+A+++ + + Q     ++++PA + + +   
Sbjct: 71  NQDNYPNGGFTAEQITKYSG------EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQ 124

Query: 236 SEQSVTVAGWG--------WTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
           + Q++TV G+         W ++      +   +Q    +   N     +   + + I +
Sbjct: 125 TNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFN-EKNEVIGI 183

Query: 288 KESQMCAGHEQGGKDACWVSRQWWTP 313
               +             V       
Sbjct: 184 HWGGVPNEFNGAVFINENVRNFLKQN 209

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1 Length = 268

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 17/155 (10%), Positives = 49/155 (31%), Gaps = 24/155 (15%)

Query: 124 NPGEFPW-----IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
           +     +     I      G     G ++ +  ++T  H +           +       
Sbjct: 13  DTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHG--DPHALKAFPSAI 70

Query: 179 DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ---WSDLIRPACLPSGSLDY 235
           +            +I  +          D+A+++ + + Q     ++++PA + + +   
Sbjct: 71  NQDNYPNGGFTAEQITKYSG------EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQ 124

Query: 236 SEQSVTVAGW--------GWTNENPSQGRRSNILQ 262
             Q++TV G+         W ++      +   +Q
Sbjct: 125 VNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQ 159

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica} Length = 218

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 4/123 (3%)

Query: 138 GGHFCGGTII---HEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIM 194
           G   C   I+   ++  + TA HCL +G     A                        + 
Sbjct: 19  GDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVT 78

Query: 195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQ 254
                +   F +D A   L      +   +       + +   +    + +G+    P  
Sbjct: 79  SAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQP-RGQYYSAYGYPAAAPFN 137

Query: 255 GRR 257
           G+ 
Sbjct: 138 GQE 140

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	388
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	100.0
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	100.0
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	100.0
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	100.0
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	100.0
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	100.0
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	100.0
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	100.0
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	100.0
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	100.0
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	100.0
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	100.0
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	100.0
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	100.0
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	100.0
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	100.0
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	100.0
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	100.0
1aut_C	250	Activated protein C; serine proteinase, plasma cal	100.0
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	100.0
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	100.0
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	100.0
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	100.0
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	100.0
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	100.0
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	100.0
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	100.0
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	100.0
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	100.0
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	100.0
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	100.0
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	100.0
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	100.0
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	100.0
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	100.0
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	100.0
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	100.0
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	100.0
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	100.0
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	100.0
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	100.0
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	100.0
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	100.0
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	100.0
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	100.0
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	100.0
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	100.0
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	100.0
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	100.0
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	100.0
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	100.0
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	100.0
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	100.0
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	100.0
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	100.0
1md8_A	329	C1R complement serine protease; innate immunity, a	100.0
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	100.0
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	100.0
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	100.0
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	100.0
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	100.0
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	100.0
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	100.0
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	100.0
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	100.0
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	100.0
2aiq_A	231	Protein C activator; snake venom serine proteinase	100.0
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	100.0
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	100.0
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	100.0
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	100.0
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	100.0
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	100.0
1elv_A	333	Complement C1S component; trypsin-like serin prote	100.0
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	100.0
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	100.0
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	100.0
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	100.0
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	100.0
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	100.0
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	100.0
1a7s_A	225	Heparin binding protein; serine protease homolog,	100.0
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	100.0
1gpz_A	399	Complement C1R component; hydrolase, activation, i	100.0
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	100.0
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	100.0
2xrc_A	565	Human complement factor I; immune system, hydrolas	100.0
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	100.0
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	100.0
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	100.0
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	100.0
3hrz_D	741	Complement factor B; serine protease, glycosilated	100.0
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	100.0
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	100.0
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	100.0
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	99.97
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	99.96
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	99.96
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	99.95
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	99.95
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	99.95
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	99.94
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	99.91
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	99.91
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	99.9
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	99.88
2pka_A	80	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.84
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	99.79
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	99.79
3k6y_A	237	Serine protease, possible membrane-associated seri	99.75
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	99.71
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	99.67
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	99.67
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	99.65
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	99.64
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.62
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	99.62
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	99.61
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	99.6
1aut_C	250	Activated protein C; serine proteinase, plasma cal	99.6
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	99.6
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	99.59
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	99.59
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	99.59
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	99.59
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	99.59
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	99.58
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	99.58
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	99.57
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	99.57
1md8_A	329	C1R complement serine protease; innate immunity, a	99.57
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	99.56
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	99.56
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	99.56
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	99.56
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	99.54
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	99.54
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	99.54
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	99.54
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	99.54
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	99.54
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	99.54
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	99.54
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	99.54
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	99.53
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	99.53
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	99.53
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	99.53
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	99.53
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	99.53
3sti_A	245	Protease DEGQ; serine protease, PDZ domain, chaper	99.52
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	99.52
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	99.52
1gpz_A	399	Complement C1R component; hydrolase, activation, i	99.52
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	99.51
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	99.51
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	99.51
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	99.51
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	99.51
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	99.51
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	99.5
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	99.5
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	99.5
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	99.5
1elv_A	333	Complement C1S component; trypsin-like serin prote	99.49
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	99.49
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	99.49
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	99.49
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	99.49
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	99.48
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	99.48
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	99.48
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	99.48
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	99.47
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	99.47
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	99.47
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	99.47
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	99.46
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	99.46
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	99.46
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	99.45
2ea3_A	189	Chymotrypsin; celloulomonas, protease, hydrolase;	99.45
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	99.45
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	99.45
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	99.45
2aiq_A	231	Protein C activator; snake venom serine proteinase	99.44
1hpg_A	187	Glutamic acid specific protease; serine protease,	99.44
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	99.44
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	99.44
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	99.44
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	99.44
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	99.43
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	99.42
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	99.42
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	99.42
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	99.41
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	99.39
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	99.39
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	99.38
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	99.38
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	99.37
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	99.37
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	99.36
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	99.36
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	99.35
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	99.34
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.33
3stj_A	345	Protease DEGQ; serine protease, PDZ domain, protea	99.32
2xrc_A	565	Human complement factor I; immune system, hydrolas	99.3
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	99.29
1a7s_A	225	Heparin binding protein; serine protease homolog,	99.26
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	99.21
3hrz_D	741	Complement factor B; serine protease, glycosilated	99.19
4a8c_A	436	Periplasmic PH-dependent serine endoprotease DEGQ;	99.17
2pfe_A	186	Protease A, alkaline serine protease, TFPA; beta-b	99.16
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	99.14
3pv2_A	451	DEGQ; trypsin fold, PDZ domain, chaperone protease	99.06
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	99.05
2oua_A	188	Serine protease, protein NAPA; kinetic stability,	98.94
1ky9_A	448	Protease DO, DEGP, HTRA; protein quality control,	98.77
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	98.58
2h5c_A	198	Alpha-lytic protease; serine protease, acylation t	98.55
2w5e_A	163	Putative serine protease; coiled coil, transmembra	98.41
4fln_A	539	Protease DO-like 2, chloroplastic; protease, DEG,	98.29
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	98.24
1wxr_A	1048	Haemoglobin protease; hemoglobine protease, autotr	98.22
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	98.19
1zyo_A	191	Serine protease; beta-barrel, glutamyl endopeptida	98.14
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	97.9
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	97.56
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	97.5
1mbm_A	198	NSP4 proteinase, chymotrypsin-like serine protease	97.41
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	97.38
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	97.36
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	96.52
3fan_A	213	Non-structural protein; chymotrypsin-like, N-termi	96.37
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	96.21
1hpg_A	187	Glutamic acid specific protease; serine protease,	96.17
1lvm_A	229	Catalytic domain of the nuclear inclusion protein	96.05
3mmg_A	241	Nuclear inclusion protein A; 3C-type protease, TEV	95.99
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	95.95
2pfe_A	186	Protease A, alkaline serine protease, TFPA; beta-b	95.55
2ea3_A	189	Chymotrypsin; celloulomonas, protease, hydrolase;	95.25
3syj_A	1011	Adhesion and penetration protein autotransporter;	95.06
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	94.81
2oua_A	188	Serine protease, protein NAPA; kinetic stability,	94.55
3k6y_A	237	Serine protease, possible membrane-associated seri	92.77
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	92.6
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	91.04
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	90.05
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	88.55
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	88.29
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	86.59
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	83.73
4ash_A	185	NS6 protease; hydrolase, trypsin-like, calicivirus	81.83
3sti_A	245	Protease DEGQ; serine protease, PDZ domain, chaper	80.7
2h5c_A	198	Alpha-lytic protease; serine protease, acylation t	80.66
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	80.08

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=100.00  E-value=8.2e-53  Score=375.43  Aligned_cols=231  Identities=34%  Similarity=0.661  Sum_probs=204.5

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC---CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS---RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|...+.++|+||||+++||||||||+.+.  ......+.|.+|.....   ....+.+.|.++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~--~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i   78 (235)
T 4dgj_A            1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGR--NLEPSKWTAILGLHMKSNLTSPQTVPRLIDEI   78 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTS--CSSGGGEEEEESCCBTTCCSCTTCEEEEEEEE
T ss_pred             CCCCccCCCCCCCcEEEEeeCCCeEEEEEEeeCCEEEECHHhcCCC--CCCCccEEEEEeeecccccCCCceeEEeEEEE
Confidence            6899999999999999999888999999999999999999999652  23456788999976553   334566789999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      +.||+|+.....||||||+|++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..+++++.+
T Consensus        79 ~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~~~  155 (235)
T 4dgj_A           79 VINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTT---ADILQEADVPLLSNE  155 (235)
T ss_dssp             EECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCB---CSBCEEEEEEEECHH
T ss_pred             EECCCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCcc---chhheEeEeeecCHH
Confidence            99999999999999999999999999999999999987654 57889999999987765443   788999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      +|+..+..    ..+.++||||+...+..+.|                              +|||||||++..+++|+|
T Consensus       156 ~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~~~~~~l  201 (235)
T 4dgj_A          156 RCQQQMPE----YNITENMICAGYEEGGIDSC------------------------------QGDSGGPLMCQENNRWFL  201 (235)
T ss_dssp             HHHHHCTT----SCCCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEEEETTEEEE
T ss_pred             HhhhhccC----ccCCCCeEeecCCCCCCccC------------------------------CCCCCCeEEEEECCcEEE
Confidence            99998752    35789999999877788899                              999999999999999999


Q ss_pred             EEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       353 ~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +||+|||.+|..++.|++||||+.|++||+++|+
T Consensus       202 ~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~i~  235 (235)
T 4dgj_A          202 AGVTSFGYECALPNRPGVYARVSRFTEWIQSFLH  235 (235)
T ss_dssp             EEEEEECSSSSCTTCCEEEEEGGGTHHHHHTTCC
T ss_pred             EEEEEEcCCCCCCCCCEEEeeHHHHHHHHHHHhC
Confidence            9999999999988999999999999999999875

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=100.00  E-value=2.4e-52  Score=374.45  Aligned_cols=228  Identities=34%  Similarity=0.685  Sum_probs=197.2

Q ss_pred             CCeEecceecCCCCcceEEEEcc-CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--Cceeeece
Q psy13815        114 TGKIVGGLAANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPV  190 (388)
Q Consensus       114 ~~~i~~g~~~~~~~~Pw~v~i~~-~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v  190 (388)
                      ..||+||.++.+++|||+|+|+. .+.++|+||||+++||||||||+..       ..+.|++|..+...  ...+.+.|
T Consensus        13 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~-------~~~~v~~G~~~~~~~~~~~~~~~v   85 (245)
T 1t8o_A           13 LSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT-------TSDVVVAGEFDQGSSSEKIQKLKI   85 (245)
T ss_dssp             ---CBTCEECCTTSSTTEEEEECTTCCEEEEEEEEETTEEEECGGGCCC-------TTSEEEESCSBTTCSSSCCEEEEE
T ss_pred             CCceECCEECCCCCCCceEEEEcCCCCeEEEEEEeeCCEEEEcHHhCcC-------CCcEEEEeeeecCCCCCCcEEEEE
Confidence            35899999999999999999986 4578999999999999999999865       34578889877653  44577899


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .+++.||+|+.....||||||+|++|+.|++.++|||||..... ..+..++++|||.+......  .+..|++..++++
T Consensus        86 ~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~--~~~~L~~~~~~~~  163 (245)
T 1t8o_A           86 AKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNAN--TPDRLQQASLPLL  163 (245)
T ss_dssp             EEEEECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CC--CCSBCEEEEEEEE
T ss_pred             EEEEeCCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCC--CcchheEEEEeeE
Confidence            99999999999889999999999999999999999999986643 57889999999988764331  2678999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|+..+..     .+.+.||||+  ..+.+.|                              .|||||||++..+++
T Consensus       164 ~~~~C~~~~~~-----~~~~~~~Ca~--~~~~~~C------------------------------~GDSGgPL~~~~~~~  206 (245)
T 1t8o_A          164 SNTNCKKYWGT-----KIKDAMICAG--ASGVSSC------------------------------MGDSGGPLVCKKNGA  206 (245)
T ss_dssp             CHHHHHHHHGG-----GCCTTEEEEE--CSSCBCC------------------------------TTCTTCEEEEEETTE
T ss_pred             cchhhhHhhcC-----cCCCceEEcc--CCCCccC------------------------------cccCcCCEEEEECCE
Confidence            99999998752     4788999998  3467889                              999999999998999


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|+||+|||.+|...+.|++||||+.|++||+++|+.
T Consensus       207 ~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~~  244 (245)
T 1t8o_A          207 WTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAA  244 (245)
T ss_dssp             EEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHHHT
T ss_pred             EEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcc
Confidence            99999999999998888999999999999999999875

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=100.00  E-value=2.4e-52  Score=372.71  Aligned_cols=230  Identities=39%  Similarity=0.715  Sum_probs=200.1

Q ss_pred             EecceecCCCCcceEEEEccC--Cc--eeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--GG--HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~~--~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|+..  ..  .+|+||||+++||||||||+.... ......+.|++|..+..  ....+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~-~~~~~~~~v~~G~~~~~~~~~~~~~~~v   79 (237)
T 2f91_A            1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDD-YENPSGLQIVAGELDMSVNEGSEQIITV   79 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSC-TTSCCSEEEEESCSBTTSCCSCCEEEEE
T ss_pred             CCCccCCCCCCCCcEEEEEEecCCCCcceEEEEEeeCCEEEEcHHhCCCCc-cCCcccEEEEECCeeccCCCCccEEEEE
Confidence            689999999999999999753  22  459999999999999999997631 12456789999988775  233478899


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      ++++.||+|+.....||||||||++|+.|++.++|||||.... ..+..++++|||.+......   +..|++..+++++
T Consensus        80 ~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~-~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~  155 (237)
T 2f91_A           80 SKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGH-TATGDVIVTGWGTTSEGGNT---PDVLQKVTVPLVS  155 (237)
T ss_dssp             EEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTC-CCCSEEEEEESCCSSTTCCC---CSBCEEEEEEEEC
T ss_pred             EEEEECCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCCCC-CCCCcEEEEECCcCCCCCCc---cceeeEEEEeEcC
Confidence            9999999999988899999999999999999999999998765 67889999999998765433   7789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|+..+..    ..+.+.||||+...++.+.|                              .|||||||++..+++|
T Consensus       156 ~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~~~~~  201 (237)
T 2f91_A          156 DEDCRADYGA----DEILDSMICAGVPEGGKDSC------------------------------QGDSGGPLAASDTGST  201 (237)
T ss_dssp             HHHHHHHHCT----TTSCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEECTTSSC
T ss_pred             HHHhhhhhCC----CCcCCCeEEEecCCCCCCCC------------------------------CCcCCCCeEEecCCCE
Confidence            9999987751    24678999998776778899                              9999999999999999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhh
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL  385 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i  385 (388)
                      +|+||+|||.+|..++.|++||||+.|++||+++|
T Consensus       202 ~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~  236 (237)
T 2f91_A          202 YLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANA  236 (237)
T ss_dssp             EEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred             EEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHHhc
Confidence            99999999999998889999999999999999876

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=100.00  E-value=7e-53  Score=376.43  Aligned_cols=230  Identities=37%  Similarity=0.674  Sum_probs=201.2

Q ss_pred             EecceecCCCCcceEEEEcc---CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKR---HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~---~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|+|+.   ...++|+||||+++||||||||+...   .....+.|++|..+..  ....+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~~~~~~~~~~v~   77 (238)
T 3bg8_A            1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGV---ESPKILRVYSGILNQSEIKEDTSFFGVQ   77 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEECSSSCEEEEEEEEEETTEEEECGGGGTTC---CCGGGEEEECSCSBGGGCCTTSCCEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEeecCCCcEEEEEEEeeCCEEEECHHHCCCC---CCCceEEEEEeeccCCcCCCCceEEeeE
Confidence            68999999999999999986   35789999999999999999999762   2346788999987764  3345678999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.||+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..+++++
T Consensus        78 ~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~  154 (238)
T 3bg8_A           78 EIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKI---QNTLQKAKIPLVT  154 (238)
T ss_dssp             EEEECTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCC---CSBCEEEECCEEC
T ss_pred             EEEECCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCCh---hhhhcEeeEEEEC
Confidence            9999999998888899999999999999999999999976532 56788999999988765443   6789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|+..+..    ..+.+.||||+...+..+.|                              .|||||||++..+++|
T Consensus       155 ~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~~~~~  200 (238)
T 3bg8_A          155 NEECQKRYRG----HKITHKMICAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVW  200 (238)
T ss_dssp             HHHHHHHCTT----SCCCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEEEETTEE
T ss_pred             HHHhhhhhcC----CCCCCCeEeecCCCCCCCcC------------------------------CCCCCcceEEEECCeE
Confidence            9999987752    24788999998776778899                              9999999999988999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +|+||+|||.+|..++.|++||||+.|++||+++++
T Consensus       201 ~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~  236 (238)
T 3bg8_A          201 HLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ  236 (238)
T ss_dssp             EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred             EEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence            999999999999988899999999999999999886

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=100.00  E-value=9.3e-53  Score=384.34  Aligned_cols=244  Identities=34%  Similarity=0.640  Sum_probs=204.3

Q ss_pred             CCCCCCccCCCCCeEecceecCCCCcceEEEEccCC-----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEecc
Q psy13815        103 VPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG-----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKE  177 (388)
Q Consensus       103 ~~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~~~-----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~  177 (388)
                      ..||...   ...||+||.++.+++|||+|+|....     .++|+||||+++||||||||+.+.........+.|++|.
T Consensus        12 ~~CG~~~---~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~   88 (278)
T 2olg_A           12 NDCGYQV---EADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGE   88 (278)
T ss_dssp             SSCSCCC---CCCCSCCSSBCCTTSSTTEEEEEEECTTCCEEEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESC
T ss_pred             hHhCCCC---CCCceECCEECCCCCCCceEEEEEecCCCCcceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCc
Confidence            4799764   46799999999999999999997542     578999999999999999999651101123467899998


Q ss_pred             ccCCCC-------------ceeeeceEEEEECCCCCCCCC--CCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEE
Q psy13815        178 HDLSRP-------------SISTVPVLRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVT  241 (388)
Q Consensus       178 ~~~~~~-------------~~~~~~v~~i~~hp~y~~~~~--~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~  241 (388)
                      ++....             ..+.+.|.+++.||+|+....  .||||||||++|+.|+++++|||||..... ..+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~  168 (278)
T 2olg_A           89 WNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLT  168 (278)
T ss_dssp             SBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEE
T ss_pred             ccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEE
Confidence            776432             346789999999999987654  799999999999999999999999987643 6788999


Q ss_pred             EEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCccccccccc
Q psy13815        242 VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVY  321 (388)
Q Consensus       242 ~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~  321 (388)
                      ++|||.+..+.    .+..|+++.+++++.++|+..+...  ...+.++||||+... +.+.|                 
T Consensus       169 v~GWG~t~~~~----~~~~l~~~~~~i~~~~~C~~~~~~~--~~~~~~~~~Ca~~~~-~~~~C-----------------  224 (278)
T 2olg_A          169 VVGWGRTETGQ----YSTIKQKLAVPVVHAEQCAKTFGAA--GVRVRSSQLCAGGEK-AKDSC-----------------  224 (278)
T ss_dssp             EEESCCSSSCC----CCSBCEEEEEEBCCGGGGGGGGSST--TCCCCTTEEEECCTT-CTTCC-----------------
T ss_pred             EEcCCcCCCCC----ccchhhcccccccCHHHHHHHhccc--cccCCCceEeeecCC-CCeeC-----------------
Confidence            99999987543    2778999999999999999877532  124788999998653 57889                 


Q ss_pred             CCCCCCCCCCCCCCCcCCCceEEe-cCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        322 PSHRSGVHWDPPLQADSGGPLMLL-GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       322 ~~~~~~~~~~~~~~gdsGgPL~~~-~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                                   +|||||||++. .+++|+|+||+|||.+|+..+.|+|||||+.|++||+++|+
T Consensus       225 -------------~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i~  277 (278)
T 2olg_A          225 -------------GGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIEGNIR  277 (278)
T ss_dssp             -------------CCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGGGGHHHHHTTCC
T ss_pred             -------------CCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHHHHHHHHHHhhC
Confidence                         99999999997 56789999999999999988899999999999999999875

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=100.00  E-value=3.5e-52  Score=370.50  Aligned_cols=230  Identities=32%  Similarity=0.605  Sum_probs=199.9

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+...   .....+.|.+|....  ...+.+.|.++++|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~---~~~~~~~v~~G~~~~--~~~~~~~v~~i~~h   75 (232)
T 2oq5_A            1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTY---KNPARWTASFGVTIK--PSKMKRGLRRIIVH   75 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSC---CCGGGEEEEESSBST--TCSEEEEEEEEEEC
T ss_pred             CCCCEECCCCCCCeeEEEEeCCCeeEEEEEEcCCEEEECHHHcCCC---CCCceEEEEEeeEEC--CCceEEeEEEEEeC
Confidence            6899999999999999999888899999999999999999999762   234678899997653  23467889999999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ  275 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~  275 (388)
                      |+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|+++.+++++.++|+
T Consensus        76 p~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~~~~C~  152 (232)
T 2oq5_A           76 EKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYS---QNHLRQAQVTLIDATTCN  152 (232)
T ss_dssp             TTCCTTCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCC---CSBCEEEEEEEECHHHHT
T ss_pred             CCCCCCCCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCC---CceeeEeEEEEeCHHHcC
Confidence            99999889999999999999999999999999986643 56889999999998765433   678999999999999998


Q ss_pred             hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec-CCccEEEE
Q psy13815        276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG-AESTQVIG  354 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~-~~~~~l~G  354 (388)
                      ..+.   ....+.+.||||+...+..+.|                              .|||||||++.. +++|+|+|
T Consensus       153 ~~~~---~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPL~~~~~~~~~~l~G  199 (232)
T 2oq5_A          153 EPQA---YNDAITPRMLCAGSLEGKTDAC------------------------------QGDSGGPLVSSDARDIWYLAG  199 (232)
T ss_dssp             STTT---TTTCCCTTEEEEECTTCSSBCC------------------------------TTCTTCEEEEECTTSCEEEEE
T ss_pred             Cccc---cCCccCCCEEeecCCCCCCccC------------------------------CCCCCCcEEEECCCCCEEEEE
Confidence            7543   1235788999999876678899                              999999999975 67899999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|||.+|..++.|++||||+.|++||++++++
T Consensus       200 I~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~i  232 (232)
T 2oq5_A          200 IVSWGDECAKPNKPGVYTRVTALRDWITSKTGI  232 (232)
T ss_dssp             EEEECSSSSBTTBCEEEEETGGGHHHHHHHHCC
T ss_pred             EEEeCCCCCCCCCCeEEEEhHHhHHHHHHHhCC
Confidence            999999998888999999999999999999864

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=100.00  E-value=4e-52  Score=372.30  Aligned_cols=231  Identities=36%  Similarity=0.682  Sum_probs=201.0

Q ss_pred             EecceecCCCCcceEEEEcc---CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKR---HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~---~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|+|+.   ...++|+||||+++||||||||+...   .....+.|++|..+..  ....+.+.|+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~~~~~~~~~~v~   77 (241)
T 2any_A            1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGL---PLQDVWRIYSGILELSDITKDTPFSQIK   77 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGSSC---CCSTTEEEECSCSBGGGCCTTSCCBCEE
T ss_pred             CCCCEECCCCCCCcEEEEEEEcCCCceEEEEEEecCCEEEECHHHcCCC---CCCccEEEEeeeeeccccccCceEEeeE
Confidence            68999999999999999976   34689999999999999999999762   2235678999987764  2345678899


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      ++++||+|+.....||||||+|++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..+++++
T Consensus        78 ~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~  154 (241)
T 2any_A           78 EIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEI---QNILQKVNIPLVT  154 (241)
T ss_dssp             EEEECTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCC---CSBCEEEEEEEEC
T ss_pred             EEEECCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCc---CchhheeEeEEeC
Confidence            9999999999888999999999999999999999999986643 57889999999998765433   6789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|+..+..    ..+.+.||||+...+..+.|                              .|||||||++..+++|
T Consensus       155 ~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~~~~~  200 (241)
T 2any_A          155 NEECQKRYQD----YKITQRMVCAGYKEGGKDAC------------------------------KGDSGGPLVCKHNGMW  200 (241)
T ss_dssp             HHHHHTTSCT----TCSCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEEEETTEE
T ss_pred             HHHhhhHhcc----CCCCcCcEeecCCCCCCccC------------------------------CCCCCCcEEEEECCEE
Confidence            9999987652    24788999998776678899                              9999999999988999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+||+|||.+|...+.|++||||+.|++||+++++.
T Consensus       201 ~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~~  237 (241)
T 2any_A          201 RLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQS  237 (241)
T ss_dssp             EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHSC
T ss_pred             EEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHhhc
Confidence            9999999999998888999999999999999999864

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=100.00  E-value=3.8e-52  Score=394.47  Aligned_cols=244  Identities=33%  Similarity=0.650  Sum_probs=207.2

Q ss_pred             CCCCCccCCCCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCC
Q psy13815        104 PCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRP  183 (388)
Q Consensus       104 ~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~  183 (388)
                      .||.+.  ....||+||.++.+++|||+|+|+..+.++|+||||+++||||||||+...  ......+.|++|..+....
T Consensus       107 ~Cg~~~--~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHCv~~~--~~~~~~~~V~~G~~~~~~~  182 (372)
T 1z8g_A          107 DCGRRK--LPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPER--NRVLSRWRVFAGAVAQASP  182 (372)
T ss_dssp             CCSCCC--CC---CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGCCGG--GCCGGGEEEEESCSBTTCT
T ss_pred             ccCCcC--CCCCceECCEECCCCCCCcEEEEEeCCceEEEEEEecCCEEEEChhhcCCC--CCccceEEEEEeeEeccCC
Confidence            477653  245799999999999999999999888899999999999999999999531  1235678999998877655


Q ss_pred             ceeeeceEEEEECCCC------CCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCC
Q psy13815        184 SISTVPVLRIMFHPSH------SCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGR  256 (388)
Q Consensus       184 ~~~~~~v~~i~~hp~y------~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~  256 (388)
                      ..+.+.|+++++||+|      +.....||||||||++|+.|+++++|||||..... ..+..++++|||.+......  
T Consensus       183 ~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~--  260 (372)
T 1z8g_A          183 HGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQ--  260 (372)
T ss_dssp             TSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCB--
T ss_pred             CCcEEEEEEEEECCCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCC--
Confidence            5567899999999999      67778899999999999999999999999986543 56889999999998765433  


Q ss_pred             CCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCC
Q psy13815        257 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA  336 (388)
Q Consensus       257 ~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  336 (388)
                       +..|+++.+++++.++|+....   ....++++||||+...++.+.|                              +|
T Consensus       261 -~~~L~~~~v~ii~~~~C~~~~~---~~~~i~~~~iCag~~~~~~d~C------------------------------~G  306 (372)
T 1z8g_A          261 -AGVLQEARVPIISNDVCNGADF---YGNQIKPKMFCAGYPEGGIDAC------------------------------QG  306 (372)
T ss_dssp             -CSBCEEEEEEEECHHHHTSTTT---TTTCCCTTEEEESCTTCSCBCC------------------------------TT
T ss_pred             -CceeeEEEEEecChHHhCcchh---cCCcCCCCeEeeecCCCCCcCC------------------------------CC
Confidence             7789999999999999986421   1225788999999877778999                              99


Q ss_pred             cCCCceEEecC----CccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        337 DSGGPLMLLGA----ESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       337 dsGgPL~~~~~----~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ||||||++..+    ++|+|+||+|||.+|..++.|+|||||+.|++||+++|+.
T Consensus       307 DSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~WI~~~i~~  361 (372)
T 1z8g_A          307 DSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKT  361 (372)
T ss_dssp             CTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred             CCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence            99999999864    8899999999999999888999999999999999999864

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=100.00  E-value=1.9e-52  Score=377.29  Aligned_cols=235  Identities=33%  Similarity=0.572  Sum_probs=204.1

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+.++.++|+||||+++||||||||+...   .....+.|++|.++...  ...+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~   77 (254)
T 2bz6_H            1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKI---KNWRNLIAVLGEHDLSEHDGDEQSRRVAQVI   77 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGGTTC---SCGGGEEEEESCCBTTCCCSCCEEEEEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEeCCCcEEEEEEecCCEEEECHHHcCCC---CCcceEEEEECCcccCCCCCCcEEEEEEEEE
Confidence            6899999999999999999888899999999999999999999762   23456899999987753  345778999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC----CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD----YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~----~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      .||+|+.....||||||+|++|+.|++.++|||||.....    ..+..++++|||.+......   +..|++..+++++
T Consensus        78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~~  154 (254)
T 2bz6_H           78 IPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGAT---ALELMVLNVPRLM  154 (254)
T ss_dssp             EETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCB---CSBCEEEEEEEEC
T ss_pred             ECCCCCCCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCC---Chhheeeeeeeec
Confidence            9999999889999999999999999999999999975421    35788999999998765432   6789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|...+........+.+.||||+...+..+.|                              .|||||||++..+++|
T Consensus       155 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPl~~~~~g~~  204 (254)
T 2bz6_H          155 TQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSC------------------------------KGDSGGPHATHYRGTW  204 (254)
T ss_dssp             HHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCC------------------------------GGGTTCEEEEEETTEE
T ss_pred             HHHHhhhhhccccCCccCCCEEeecCCCCCCccc------------------------------cccCCCceEEeECCEE
Confidence            9999988764322335789999998776678899                              9999999999988999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+||+|||.+|...+.|++||||+.|++||+++++.
T Consensus       205 ~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~  241 (254)
T 2bz6_H          205 YLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRS  241 (254)
T ss_dssp             EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHTS
T ss_pred             EEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence            9999999999999888999999999999999999864

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=100.00  E-value=2.7e-52  Score=375.52  Aligned_cols=232  Identities=34%  Similarity=0.569  Sum_probs=199.6

Q ss_pred             CCCeEecceecCCCCcceEEEEccC----CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC---CCce
Q psy13815        113 RTGKIVGGLAANPGEFPWIVSLKRH----GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS---RPSI  185 (388)
Q Consensus       113 ~~~~i~~g~~~~~~~~Pw~v~i~~~----~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~---~~~~  185 (388)
                      ...||+||.++.+++|||+|+|...    ..++|+||||+++||||||||+.+      ...+.|++|.++..   ....
T Consensus        10 ~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~------~~~~~V~~G~~~~~~~~~~~~   83 (251)
T 1pyt_D           10 LSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISN------TLTYRVALGKNNLEVEDEAGS   83 (251)
T ss_dssp             SSSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT------TCCEEEEESCSBTTCSCCSSC
T ss_pred             cCCccCCCEECCCCCCCceEEEEEEcCCCcceEEEeEEecCCEEEECHHHhCC------CceEEEEEcccccccCCCCCc
Confidence            3569999999999999999999742    357899999999999999999964      45688999988764   2344


Q ss_pred             eeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEE
Q psy13815        186 STVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKV  264 (388)
Q Consensus       186 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~  264 (388)
                      +.+.|++++.||+|+.....||||||+|++|+.|++.++|||||..... ..+..++++|||.+......   +..|++.
T Consensus        84 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~  160 (251)
T 1pyt_D           84 LYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPI---AAELQQG  160 (251)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCC---CSBCBCC
T ss_pred             EEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCc---ccchhee
Confidence            6788999999999999888999999999999999999999999987643 56788999999998765433   6789999


Q ss_pred             EEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEE
Q psy13815        265 ALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLML  344 (388)
Q Consensus       265 ~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~  344 (388)
                      .+++++.++|+..+.   ....+.+.||||+. .+..+.|                              .|||||||++
T Consensus       161 ~~~~~~~~~C~~~~~---~~~~~~~~~~Ca~~-~~~~~~C------------------------------~GDSGgPL~~  206 (251)
T 1pyt_D          161 LQPVVDYATCSQRDW---WGTTVKETMVCAGG-DGVISAC------------------------------NGDSGGPLNC  206 (251)
T ss_dssp             EEECBCHHHHTSTTT---TTTTCCTTEEEECC-SCSSCCC------------------------------CSCTTCEEEE
T ss_pred             EeEeeCHHHcchhhc---cCCCcCCCeEEecC-CCCCccC------------------------------CCCCCCceEE
Confidence            999999999987543   12257889999986 4567889                              9999999999


Q ss_pred             ecCCccEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        345 LGAESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       345 ~~~~~~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ..+++|+|+||+|||.  +|...+.|+|||||+.|++||+++++.
T Consensus       207 ~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~l  251 (251)
T 1pyt_D          207 QADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKLQL  251 (251)
T ss_dssp             ESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHTTC
T ss_pred             EECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHHhcC
Confidence            9889999999999996  798778899999999999999999863

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=100.00  E-value=1.4e-51  Score=368.78  Aligned_cols=233  Identities=37%  Similarity=0.703  Sum_probs=203.7

Q ss_pred             EecceecCCCCcceEEEEccCC-ceeEEEEEeeCCEEEecCcCCCCCC--CCCccceEEEEeccccCCC---Cceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCNGP--SPLSASQINVTLKEHDLSR---PSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~-~~~C~GtLI~~~~VLTAAhCv~~~~--~~~~~~~~~v~~g~~~~~~---~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|...+ .++|+||||+++||||||||+.+..  .......+.|++|..+...   ...+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v   80 (241)
T 3ncl_A            1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRL   80 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEE
T ss_pred             CCCCeECCCCCCCcEEEEEcCCCceEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEE
Confidence            6899999999999999998655 5899999999999999999997632  1134577899999887653   34578899


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .+++.||+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..++++
T Consensus        81 ~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~  157 (241)
T 3ncl_A           81 KRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTG---ALILQKGEIRVI  157 (241)
T ss_dssp             EEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCB---CSBCEEEEEEEC
T ss_pred             EEEEECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCc---CceeeEEeEEEE
Confidence            99999999999989999999999999999999999999986654 57889999999998765443   678999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEe-cCC
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-GAE  348 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~-~~~  348 (388)
                      +.++|+..+..     .+.+.|||++...+..+.|                              +|||||||++. .++
T Consensus       158 ~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~~~g  202 (241)
T 3ncl_A          158 NQTTCENLLPQ-----QITPRMMCVGFLSGGVDSC------------------------------QGDSGGPLSSVEADG  202 (241)
T ss_dssp             CHHHHHHHSTT-----TCCTTEEEEECTTCSSBCC------------------------------TTCTTCEEEEECTTS
T ss_pred             CHHHhhhhccc-----CCCCCeEEeCCCCCCCccC------------------------------CCcCCCCEEEEcCCC
Confidence            99999988752     5788999999877788899                              99999999975 478


Q ss_pred             ccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       349 ~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+|+||+|||.+|..++.|++||+|+.|++||++++++
T Consensus       203 ~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~~~i  241 (241)
T 3ncl_A          203 RIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENTGV  241 (241)
T ss_dssp             CEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHHHCC
T ss_pred             cEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHhCC
Confidence            999999999999999888999999999999999999874

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=100.00  E-value=1.7e-51  Score=376.79  Aligned_cols=247  Identities=30%  Similarity=0.612  Sum_probs=205.7

Q ss_pred             CCCCCCCccCC--CCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEecccc
Q psy13815        102 GVPCGRSLASR--RTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHD  179 (388)
Q Consensus       102 ~~~cg~~~~~~--~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~  179 (388)
                      ...||......  ...||+||.++.+++|||+|+|+.. .++|+||||+++||||||||+.+.   .....+.|++|..+
T Consensus        19 ~~~CG~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~-~~~CgGsLIs~~~VLTAAHC~~~~---~~~~~~~V~~G~~~   94 (283)
T 1yc0_A           19 RQACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYIG-DSFCAGSLVHTCWVVSAAHCFSHS---PPRDSVSVVLGQHF   94 (283)
T ss_dssp             --CCSCCSCC-------CBSCEECCTTSSTTEEEEEET-TEEEEEEEEETTEEEECGGGGTTC---CCGGGEEEEESCCB
T ss_pred             CCCcCCcccccccCcCceECCeECCCCCCCeEEEEEcC-CcEEEEEEeeCCEEEECHHHcCCC---CCCceEEEEEeeee
Confidence            34699876432  2369999999999999999999865 689999999999999999999762   23467899999887


Q ss_pred             CCC--CceeeeceEEEEECCCCCC-CCCCCcEEEEEeCCC----CCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCC
Q psy13815        180 LSR--PSISTVPVLRIMFHPSHSC-SSFNNDIALLELTRS----IQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNEN  251 (388)
Q Consensus       180 ~~~--~~~~~~~v~~i~~hp~y~~-~~~~~DIALl~L~~~----v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~  251 (388)
                      ...  ...+.+.|.+++.||+|+. ....||||||+|+++    +.|+++++|||||..... ..+..++++|||.+...
T Consensus        95 ~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~  174 (283)
T 1yc0_A           95 FNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDEN  174 (283)
T ss_dssp             TTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTT
T ss_pred             cccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCC
Confidence            753  3457889999999999998 778899999999999    889999999999986543 57889999999998754


Q ss_pred             CCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCC
Q psy13815        252 PSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWD  331 (388)
Q Consensus       252 ~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (388)
                      ...  .+..|++..+++++.++|+..+.   ....+.+.||||+...+..+.|                           
T Consensus       175 ~~~--~~~~L~~~~v~i~~~~~C~~~~~---~~~~~~~~~iCa~~~~~~~~~C---------------------------  222 (283)
T 1yc0_A          175 VSG--YSSSLREALVPLVADHKCSSPEV---YGADISPNMLCAGYFDCKSDAC---------------------------  222 (283)
T ss_dssp             BCS--CCSBCEEEEEEBCCHHHHTSTTT---TGGGCCTTEEEESCSSSCCBCC---------------------------
T ss_pred             CCc--cCchheEeEEEEECHHHhcCccc---cCCcCCCCEEeeCCCCCCCccC---------------------------
Confidence            321  26789999999999999986432   1235788999998776678899                           


Q ss_pred             CCCCCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        332 PPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       332 ~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                         .|||||||++..+++|+|+||+|||.+|+..+.|+|||||+.|++||+++|+.
T Consensus       223 ---~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~  275 (283)
T 1yc0_A          223 ---QGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIRP  275 (283)
T ss_dssp             ---TTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHCC-
T ss_pred             ---CCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHHHhcC
Confidence               99999999999889999999999999999888999999999999999999864

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=100.00  E-value=4.1e-53  Score=396.10  Aligned_cols=247  Identities=26%  Similarity=0.491  Sum_probs=199.5

Q ss_pred             CCCCCCCCCCCccC-CCCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEec
Q psy13815         98 SPIAGVPCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK  176 (388)
Q Consensus        98 ~~~~~~~cg~~~~~-~~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g  176 (388)
                      .|...+.||++... ....||+||.+|.+++|||+|+|...+.++|+||||+++||||||||+.....    ....+..+
T Consensus        83 lp~C~p~CG~p~~~~~~~~RIvGG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~----~~~~~~~~  158 (347)
T 4f4o_C           83 LPECEAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHK----NDTKAKDI  158 (347)
T ss_dssp             CCEEEECCSCCSSCC-----CCSCCBCCSCCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHTTTSC----TTCCHHHH
T ss_pred             CCCccCCCCCCCCCCCCCCeEECCEECCCCCCCcEEEEEeCCCEEEEEEEEcCCEEEeCcccccCCCC----CcceEEee
Confidence            34446779976532 34579999999999999999999998899999999999999999999965221    11112222


Q ss_pred             ccc--CCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCC
Q psy13815        177 EHD--LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQ  254 (388)
Q Consensus       177 ~~~--~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~  254 (388)
                      ...  ......+.+.|+++++||+|+    .||||||||++|+.|+++++|||||.......+..++++|||.+....  
T Consensus       159 ~~~~~~~~~~~~~~~V~~i~~HP~y~----~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~--  232 (347)
T 4f4o_C          159 APTLRLYVGKKQEVEIEKVIFHPDNS----TVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLN--  232 (347)
T ss_dssp             GGGCEEEETTTEEECEEEEEECSCTT----TCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSS--
T ss_pred             eeeeeecCCCeEEEEEEEEEECcCCC----CCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCC--
Confidence            111  123345678999999999986    489999999999999999999999987766778899999999876543  


Q ss_pred             CCCCccceEEEEEeechhhhhhHhhcCC------------CccccCCCeEEeccCCCCcCcccCCcccCCcccccccccC
Q psy13815        255 GRRSNILQKVALSVVSNQVCQAWYQSEG------------KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYP  322 (388)
Q Consensus       255 ~~~~~~l~~~~~~i~~~~~C~~~~~~~~------------~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~  322 (388)
                        .+..|+++.+++++.++|.+.|....            ....++++||||+...++.++|                  
T Consensus       233 --~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C------------------  292 (347)
T 4f4o_C          233 --FTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTC------------------  292 (347)
T ss_dssp             --BCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCC------------------
T ss_pred             --CCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEecCCCCCCCCC------------------
Confidence              37889999999999999999886321            2234788999999888889999                  


Q ss_pred             CCCCCCCCCCCCCCcCCCceEEe--cCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        323 SHRSGVHWDPPLQADSGGPLMLL--GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       323 ~~~~~~~~~~~~~gdsGgPL~~~--~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                                  +|||||||++.  .+++|+|+||+|||.+|+. +.|+|||||+.|++||+++|..
T Consensus       293 ------------~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~~-~~pgVYTrVs~y~~WI~~~i~~  346 (347)
T 4f4o_C          293 ------------YGDAGSAFAVHDKDDDTWYAAGILSFDKSCRT-AEYGVYVRVTSILDWIQTTIAD  346 (347)
T ss_dssp             ------------TTCTTCEEEEEETTTTEEEEEEEEEECCCTTT-SSCEEEEEHHHHHHHHHHHHTC
T ss_pred             ------------CCCCCcceEEEeCCCCEEEEEEEEEeCCCCCC-CCCeEEEEHHHHHHHHHHHHHc
Confidence                        99999999985  4679999999999999975 5699999999999999999975

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=100.00  E-value=3e-51  Score=368.94  Aligned_cols=234  Identities=34%  Similarity=0.626  Sum_probs=205.0

Q ss_pred             EecceecCCCCcceEEEEcc-CCceeEEEEEeeCCEEEecCcCCCCCCC----------CCccceEEEEeccccCC--CC
Q psy13815        117 IVGGLAANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIVTAAHCLCNGPS----------PLSASQINVTLKEHDLS--RP  183 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~-~~~~~C~GtLI~~~~VLTAAhCv~~~~~----------~~~~~~~~v~~g~~~~~--~~  183 (388)
                      |+||.++.+++|||+|+|.. .+.++|+||||+++||||||||+.....          ......+.|++|..+..  ..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~   80 (251)
T 3gov_B            1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDE   80 (251)
T ss_dssp             CBTCEECCTTSCTTEEEEEETTCCEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCS
T ss_pred             CCCCEECCCCCcCeEEEEeccCCCeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCC
Confidence            68999999999999999976 5688999999999999999999965211          13456789999988764  34


Q ss_pred             ceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceE
Q psy13815        184 SISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK  263 (388)
Q Consensus       184 ~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~  263 (388)
                      ..+.+.|.+++.||+|+.....||||||+|++|+.|++.++|||||.... ..+..++++|||.+....    .+..|++
T Consensus        81 ~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~~~-~~~~~~~v~GwG~~~~~~----~~~~L~~  155 (251)
T 3gov_B           81 NEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQ-QEGAMVIVSGWGKQFLQR----FPETLME  155 (251)
T ss_dssp             SCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSSCC-CTTCEEEEEECSCCTTSC----CCSBCEE
T ss_pred             cceEeeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCCCC-CCCCEEEEEcCCCCCCCC----CCccceE
Confidence            56788999999999999988999999999999999999999999998776 678999999999876543    3778999


Q ss_pred             EEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceE
Q psy13815        264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM  343 (388)
Q Consensus       264 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~  343 (388)
                      ..+++++.++|+..+...  ...+++.||||+...+..+.|                              +|||||||+
T Consensus       156 ~~~~~~~~~~C~~~~~~~--~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~  203 (251)
T 3gov_B          156 IEIPIVDHSTCQKAYAPL--KKKVTRDMICAGEKEGGKDAC------------------------------AGDSGGPMV  203 (251)
T ss_dssp             EEEEEECHHHHHHHTTTT--TCCCCTTEEEESCTTCCCBCC------------------------------TTCTTCEEE
T ss_pred             EeeEEECHHHhhhhhhhc--cCCCCCCcEEecCCCCCCccC------------------------------CCCCCCeEE
Confidence            999999999999987632  235788999999877778999                              999999999


Q ss_pred             Ee--cCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        344 LL--GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       344 ~~--~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +.  .+++|+|+||+|||.+|...+.|++||+|+.|++||++++++
T Consensus       204 ~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~  249 (251)
T 3gov_B          204 TLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRVTGV  249 (251)
T ss_dssp             EECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHHHHCC
T ss_pred             eeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHHhcc
Confidence            97  568999999999999999888999999999999999999875

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=100.00  E-value=2.3e-51  Score=371.84  Aligned_cols=236  Identities=36%  Similarity=0.649  Sum_probs=205.5

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|...+.++|+||||+++||||||||+.+   ......+.|++|..+..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAhC~~~---~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~   77 (261)
T 3gyl_B            1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPS---EHHKEAYEVKLGAHQLDSYSEDAKVSTLKDII   77 (261)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGSCT---TSCGGGEEEEESCSBTTSCCSSCEEECEEEEE
T ss_pred             CCCCcCCCCCCCCcEEEEeeCCceEEEEEEEcCCEEEECHHHCCC---CCCcccEEEEeCceeccCCCCCceEEEEEEEE
Confidence            689999999999999999988899999999999999999999965   23456788999988775  3345678999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      .||+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+...... ..+..|++..+++++.++
T Consensus        78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~-~~~~~l~~~~~~~~~~~~  156 (261)
T 3gyl_B           78 PHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSL-LTPKPLQQLEVPLISRET  156 (261)
T ss_dssp             ECTTCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCC-CTTCBCEEEEEEEECHHH
T ss_pred             ECCCcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCc-cCCccceEEEEEEECHHH
Confidence            9999999889999999999999999999999999986654 57889999999988754321 126789999999999999


Q ss_pred             hhhHhhcCC---CccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        274 CQAWYQSEG---KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       274 C~~~~~~~~---~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      |+..+....   ....+.++||||+...+..+.|                              .|||||||++..+++|
T Consensus       157 C~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~~~~~  206 (261)
T 3gyl_B          157 CNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDAC------------------------------QGDSGGPLSCPVEGLW  206 (261)
T ss_dssp             HHHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCC------------------------------TTTTTCEEEEEETTEE
T ss_pred             hhhhhcccccccccccccCCeEeeCCCCCCCccC------------------------------CCCCCCeeEEEeCCEE
Confidence            999876321   1235789999998777778899                              9999999999999999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +|+||+|||.+|+..+.|++||+|+.|++||+++|+
T Consensus       207 ~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~  242 (261)
T 3gyl_B          207 YLTGIVSWGDACGARNRPGVYTLASSYASWIQSKVT  242 (261)
T ss_dssp             EEEEEECCCCCSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             EEEEEEecCCCCCCCCCCCEEEEHHHhHHHHHHHHh
Confidence            999999999999988899999999999999999985

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=100.00  E-value=1e-51  Score=369.02  Aligned_cols=231  Identities=35%  Similarity=0.706  Sum_probs=201.3

Q ss_pred             EecceecCCCCcceEEEEccCC--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCC--ceeeeceEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRP--SISTVPVLR  192 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~--~~~~~~v~~  192 (388)
                      |+||.++.+++|||+|+|+..+  .++|+||||+++||||||||+..    .....+.|++|..+....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~~~~~~~~~~~v~~   76 (238)
T 1ym0_A            1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQG----EAPALVSLVVGEHDSSAASTVRQTHDVDS   76 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEEGGGTEEEEEEEEEETTEEEECHHHHTT----CCGGGEEEEESCSBTTSCCSSCEEEEEEE
T ss_pred             CCCCEECCCCccCCEEEEEeCCCCceEEEEEEeeCCEEEECHHhCCC----CCCceEEEEEcccccCCCCCCceEEEEEE
Confidence            6899999999999999998765  78999999999999999999976    245678999998877533  457889999


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      ++.||+|+.....||||||||++|+.|++.++|||||.......+..++++|||.+......  .+..|++..+++++.+
T Consensus        77 i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~--~~~~l~~~~~~~~~~~  154 (238)
T 1ym0_A           77 IFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVC--CPAVLRYVTLNITTNA  154 (238)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCS--CCSBCEEEEEEECCHH
T ss_pred             EEECCCCCCCCCcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCc--CCccceEEEEEeeCHH
Confidence            99999999988899999999999999999999999998765457889999999988764321  2678999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCC--cCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec-CCc
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGG--KDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG-AES  349 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~--~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~-~~~  349 (388)
                      +|+..+..    ..+.+.||||+...+.  .+.|                              .|||||||++.. +++
T Consensus       155 ~C~~~~~~----~~~~~~~~Ca~~~~~~~~~~~C------------------------------~GDsGgPL~~~~~~~~  200 (238)
T 1ym0_A          155 FCDAVYTS----DTIYDDMICATDNTGMTDRDSC------------------------------QGDSGGPLSVKDGSGI  200 (238)
T ss_dssp             HHHHHCTT----SCCCTTEEEEECSSCSSSCBCC------------------------------TTTTTCEEEEECTTCC
T ss_pred             HHhHhhcc----cccCCCeEEecCCCCCCcCccC------------------------------CCccCCeeEEECCCCC
Confidence            99987752    2578899999876554  7889                              999999999987 789


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      |+|+||+|||.+|. .+.|++||||+.|++||+++|+.+
T Consensus       201 ~~l~Gi~S~g~~C~-~~~p~vyt~v~~~~~WI~~~i~~n  238 (238)
T 1ym0_A          201 FSLVGIVSWGIGCA-SGYPGVYSRVGFHAGWITDTITNN  238 (238)
T ss_dssp             EEEEEEEEECSSSS-SSSCEEEEEHHHHHHHHHHHHHCC
T ss_pred             EEEEEEEeECCCCC-CCCCcEEEEHHHhHHHHHHHhcCC
Confidence            99999999999998 788999999999999999999754

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=100.00  E-value=2.3e-51  Score=367.17  Aligned_cols=228  Identities=37%  Similarity=0.672  Sum_probs=196.2

Q ss_pred             EecceecCCCCcceEEEEccC--C--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--Cceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--G--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|...  +  .++|+||||+++||||||||+..      ...+.|++|..+...  ...+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~------~~~~~V~~G~~~~~~~~~~~~~~~v   74 (241)
T 1bru_P            1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS------SRTYRVVLGRHSLSTNEPGSLAVKV   74 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT------TSCEEEEESCSBSSSCCTTCEEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEEecCCceeeEEEeEEeeCCEEEEcHHhccc------CCceEEEEEcccccCCCCccEEEEE
Confidence            689999999999999999863  3  47999999999999999999963      256889999887653  34578899


Q ss_pred             EEEEECCCCCCCCCC--CcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEE
Q psy13815        191 LRIMFHPSHSCSSFN--NDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALS  267 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~--~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~  267 (388)
                      +++++||+|+.....  ||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..++
T Consensus        75 ~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~  151 (241)
T 1bru_P           75 SKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGAS---PDILQQGQLL  151 (241)
T ss_dssp             EEEEECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCC---CSBCEEEEEE
T ss_pred             EEEEECCCCCCCCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCC---CccceeCEEE
Confidence            999999999987766  99999999999999999999999987643 56789999999998765433   7789999999


Q ss_pred             eechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec-
Q psy13815        268 VVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG-  346 (388)
Q Consensus       268 i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~-  346 (388)
                      +++.++|+..+.   ....+.+.||||+. .+..+.|                              +|||||||++.. 
T Consensus       152 i~~~~~C~~~~~---~~~~~~~~~~Ca~~-~~~~~~C------------------------------~GDSGgPL~~~~~  197 (241)
T 1bru_P          152 VVDYATCSKPGW---WGSTVKTNMICAGG-DGIISSC------------------------------NGDSGGPLNCQGA  197 (241)
T ss_dssp             EECHHHHTSTTT---TGGGCCTTEEEECC-SSSSBCC------------------------------TTCTTCEEEEECT
T ss_pred             EecHHHhCcccc---cCCcCCCceEeecC-CCCCccC------------------------------CCCCCCcEEEECC
Confidence            999999987532   12257889999984 4567889                              999999999986 


Q ss_pred             CCccEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        347 AESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       347 ~~~~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +++|+|+||+|||.  +|..++.|+|||||+.|++||+++|+.
T Consensus       198 ~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~~  240 (241)
T 1bru_P          198 NGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIAN  240 (241)
T ss_dssp             TSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHHH
T ss_pred             CCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHHhc
Confidence            78999999999997  898888999999999999999999864

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=100.00  E-value=6.8e-52  Score=380.47  Aligned_cols=239  Identities=33%  Similarity=0.637  Sum_probs=195.6

Q ss_pred             CCeEecceecCCCCcceEEEEccC--CceeEEEEEeeCCEEEecCcCCCCCC--CCCccceEEEEeccccCCC---Ccee
Q psy13815        114 TGKIVGGLAANPGEFPWIVSLKRH--GGHFCGGTIIHEQWIVTAAHCLCNGP--SPLSASQINVTLKEHDLSR---PSIS  186 (388)
Q Consensus       114 ~~~i~~g~~~~~~~~Pw~v~i~~~--~~~~C~GtLI~~~~VLTAAhCv~~~~--~~~~~~~~~v~~g~~~~~~---~~~~  186 (388)
                      ..||+||.++.+++|||+|+|+..  +.++|+||||+++||||||||+....  .......+.|++|.++...   ...+
T Consensus        28 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~  107 (289)
T 2bdy_A           28 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEK  107 (289)
T ss_dssp             ---CBSCEECCTTSCTTEEEEEETTTTEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCE
T ss_pred             CCeEECCEECCCCCCCCeEEEEECCCCCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcce
Confidence            469999999999999999999653  46899999999999999999995311  1133567899999887642   2245


Q ss_pred             eeceEEEEECCCCCC-CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC----CCCCCeEEEEEccccCCCCCC--CC-CC
Q psy13815        187 TVPVLRIMFHPSHSC-SSFNNDIALLELTRSIQWSDLIRPACLPSGSL----DYSEQSVTVAGWGWTNENPSQ--GR-RS  258 (388)
Q Consensus       187 ~~~v~~i~~hp~y~~-~~~~~DIALl~L~~~v~~~~~v~picLp~~~~----~~~~~~~~~~GwG~~~~~~~~--~~-~~  258 (388)
                      .+.|.++++||+|+. ....||||||||++|+.|+++++|||||....    ...+..++++|||.+......  +. .+
T Consensus       108 ~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~  187 (289)
T 2bdy_A          108 ISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQP  187 (289)
T ss_dssp             EEEEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCC
T ss_pred             eeeeEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCcccccc
Confidence            678999999999985 56789999999999999999999999997542    146788999999988654211  01 15


Q ss_pred             ccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCC---CCcCcccCCcccCCcccccccccCCCCCCCCCCCCCC
Q psy13815        259 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ---GGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ  335 (388)
Q Consensus       259 ~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~---~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (388)
                      ..|+++.+++++.++|+..+.     ..+.++||||+...   ...+.|                              +
T Consensus       188 ~~L~~~~v~i~~~~~C~~~~~-----~~i~~~~iCag~~~~~~~~~~~C------------------------------~  232 (289)
T 2bdy_A          188 SVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDAC------------------------------E  232 (289)
T ss_dssp             SBCEEEEEEBCCHHHHHHTCS-----SCCCTTEEEECCCGGGCCCCBCC------------------------------T
T ss_pred             ccceEEEEEEECHHHhhcccc-----CcCCCCEEeccCCCCCCCCCccC------------------------------C
Confidence            689999999999999998663     24788999998643   256889                              9


Q ss_pred             CcCCCceEEec--CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        336 ADSGGPLMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       336 gdsGgPL~~~~--~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |||||||++..  +++|+|+||+|||.+|+.++.|+|||||+.|++||+++|+.
T Consensus       233 GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~  286 (289)
T 2bdy_A          233 GDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ  286 (289)
T ss_dssp             TCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHHHC
T ss_pred             CCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHh
Confidence            99999999987  78999999999999999888999999999999999999864

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=100.00  E-value=1.1e-51  Score=371.21  Aligned_cols=230  Identities=33%  Similarity=0.622  Sum_probs=197.7

Q ss_pred             EecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|+.. ..++|+||||+++||||||||+.+      ...+.|++|.++..  ....+.+.|.++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLI~~~~VLTAAHC~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i   74 (250)
T 1aut_C            1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDE------SKKLLVRLGEYDLRRWEKWELDLDIKEV   74 (250)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTSCEEEEEEEEETTEEEECGGGSSS------CSCCEEEESCCBTTCCCTTCEEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEecCCCceEEEEEEeeCCEEEEChHHcCC------CCceEEEEcccccCCCCCccEEEEEEEE
Confidence            689999999999999999864 468999999999999999999965      34568999988765  334567899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC-----CCCCCeEEEEEccccCCCCCCC--CCCccceEEEE
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL-----DYSEQSVTVAGWGWTNENPSQG--RRSNILQKVAL  266 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~-----~~~~~~~~~~GwG~~~~~~~~~--~~~~~l~~~~~  266 (388)
                      +.||+|+.....||||||+|++|+.|++.++|||||....     ...+..++++|||.+.......  ..+..|+++.+
T Consensus        75 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~  154 (250)
T 1aut_C           75 FVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKI  154 (250)
T ss_dssp             EECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEE
T ss_pred             EECCCCCCCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEE
Confidence            9999999988899999999999999999999999997532     2467899999999887643321  11347999999


Q ss_pred             EeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec
Q psy13815        267 SVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG  346 (388)
Q Consensus       267 ~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~  346 (388)
                      ++++.++|+..+..     .+.++||||+...+..+.|                              .|||||||++..
T Consensus       155 ~i~~~~~C~~~~~~-----~~~~~~~Cag~~~~~~~~C------------------------------~GDSGGPL~~~~  199 (250)
T 1aut_C          155 PVVPHNECSEVMSN-----MVSENMLCAGILGDRQDAC------------------------------EGDSGGPMVASF  199 (250)
T ss_dssp             EEECHHHHHHHCSS-----CCCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEEEE
T ss_pred             EEecHHHhhHHhcc-----CCCCCEEEeCCCCCCCCCC------------------------------CCCCchheEEEE
Confidence            99999999987642     4688999998766678899                              999999999988


Q ss_pred             CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        347 AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       347 ~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +++|+|+||+|||.+|...+.|+|||||+.|++||+++++.
T Consensus       200 ~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~  240 (250)
T 1aut_C          200 HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIRD  240 (250)
T ss_dssp             TTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC-
T ss_pred             CCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhhc
Confidence            89999999999999999888999999999999999999864

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=100.00  E-value=1.3e-51  Score=392.17  Aligned_cols=252  Identities=30%  Similarity=0.555  Sum_probs=209.9

Q ss_pred             CCCCCCCccCCCCCeEecc-eecCCCCcceEEEEccC--------CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEE
Q psy13815        102 GVPCGRSLASRRTGKIVGG-LAANPGEFPWIVSLKRH--------GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN  172 (388)
Q Consensus       102 ~~~cg~~~~~~~~~~i~~g-~~~~~~~~Pw~v~i~~~--------~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~  172 (388)
                      ...||.+.......||+|| .++..++|||||+|...        ..++|+||||+++||||||||+....  .....+.
T Consensus       115 ~~~CG~~~~~~~~~rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~--~~~~~~~  192 (394)
T 2b9l_A          115 PSFCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQ--SNLDAIK  192 (394)
T ss_dssp             CCCTTBCCTTCSSCEEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGT--TCGGGEE
T ss_pred             CCCCCCCCCCCCCceeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCC--CCcccEE
Confidence            4579987644345699999 89999999999999753        25899999999999999999997521  1236789


Q ss_pred             EEeccccCCCC----ceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEcccc
Q psy13815        173 VTLKEHDLSRP----SISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWT  248 (388)
Q Consensus       173 v~~g~~~~~~~----~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~  248 (388)
                      |++|.++....    ..+.+.|+++++||+|+.....||||||+|++|+.|+++|+|||||.......+..++++|||.+
T Consensus       193 V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t  272 (394)
T 2b9l_A          193 IRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKK  272 (394)
T ss_dssp             EEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTT
T ss_pred             EEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCc
Confidence            99999877532    24678999999999999988899999999999999999999999998665456788999999988


Q ss_pred             CCCCCCCCCCccceEEEEEeechhhhhhHhhcC--CCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCC
Q psy13815        249 NENPSQGRRSNILQKVALSVVSNQVCQAWYQSE--GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRS  326 (388)
Q Consensus       249 ~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~--~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~  326 (388)
                      ..... +..+..|+++.+++++.++|+..+...  +....+.++||||+.. .+.+.|                      
T Consensus       273 ~~~~~-~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~-~g~d~C----------------------  328 (394)
T 2b9l_A          273 EFGSR-HRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGE-QGKDTC----------------------  328 (394)
T ss_dssp             TTTCT-TSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCB-SSCSCC----------------------
T ss_pred             cCCCC-CcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEeeCC-CCCcCC----------------------
Confidence            65422 123678999999999999999987632  1223578999999864 357889                      


Q ss_pred             CCCCCCCCCCcCCCceEEec---CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        327 GVHWDPPLQADSGGPLMLLG---AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       327 ~~~~~~~~~gdsGgPL~~~~---~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                              +|||||||++..   +++|+|+||+|||.+|+..+.|+|||||+.|++||+++|+.
T Consensus       329 --------~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVYT~V~~y~~WI~~~i~~  384 (394)
T 2b9l_A          329 --------TGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQEMQA  384 (394)
T ss_dssp             --------SSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEEEEGGGGHHHHHHHHHH
T ss_pred             --------CCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHHh
Confidence                    999999999963   46899999999999999888999999999999999999863

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=100.00  E-value=1.5e-51  Score=377.94  Aligned_cols=233  Identities=35%  Similarity=0.681  Sum_probs=197.6

Q ss_pred             EecceecCCCCcceEEEEccC----C--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC-------C
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH----G--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR-------P  183 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~----~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~-------~  183 (388)
                      |+||.++.+++|||||+|...    +  .++|+||||+++||||||||+...   .....+.|++|..+...       .
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~~~~~~~~~   77 (290)
T 1fiw_A            1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIK---KKVTDWRLIFGAKEVEWGTNKPVKP   77 (290)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSSC---CSGGGEEEEESCSBCCTTCCSCCCT
T ss_pred             CCCCEECCCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCCC---CCCcceEEEecceEEeccCCCcCCC
Confidence            689999999999999999752    2  578999999999999999999752   23457889999876642       2


Q ss_pred             ceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC--CCCCeEEEEEccccCCCCCCCCCCccc
Q psy13815        184 SISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD--YSEQSVTVAGWGWTNENPSQGRRSNIL  261 (388)
Q Consensus       184 ~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~--~~~~~~~~~GwG~~~~~~~~~~~~~~l  261 (388)
                      ..+.+.|+++++||+|+.....||||||||++|+.|+++++|||||.....  ..+..++++|||.+......  .+..|
T Consensus        78 ~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~--~~~~L  155 (290)
T 1fiw_A           78 PLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARR--TSPML  155 (290)
T ss_dssp             TCEEEEEEEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSS--CCSBC
T ss_pred             CceEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCC--CCcee
Confidence            356788999999999999888999999999999999999999999975432  35789999999988764321  25689


Q ss_pred             eEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCc
Q psy13815        262 QKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP  341 (388)
Q Consensus       262 ~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgP  341 (388)
                      +++.+++++.++|+..+.   ....+.+.||||+...+..+.|                              +||||||
T Consensus       156 ~~~~v~i~~~~~C~~~~~---~~~~i~~~~iCag~~~~~~~~C------------------------------~GDSGGP  202 (290)
T 1fiw_A          156 QEARVDLIDLGLCNSTRW---YNGRIRSTNVCAGYPEGKIDTC------------------------------QGDSGGP  202 (290)
T ss_dssp             EEEEEEEECHHHHTSTTT---TTTCCCTTEEEEECTTCSSBCC------------------------------TTCTTCE
T ss_pred             eEEEEEEecHHHhccccc---cCCcCCCCEEEEecCCCCCeeC------------------------------CCCCchh
Confidence            999999999999986432   1225788999999777778999                              9999999


Q ss_pred             eEEec--CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        342 LMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       342 L~~~~--~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |++..  +++|+|+||+|||.+|...+.|+|||||+.|++||+++++.
T Consensus       203 Lv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~  250 (290)
T 1fiw_A          203 LMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKIGS  250 (290)
T ss_dssp             EEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHHHHHHCH
T ss_pred             eEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHhCc
Confidence            99986  68999999999999999888999999999999999998863

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=100.00  E-value=5.8e-52  Score=369.86  Aligned_cols=227  Identities=34%  Similarity=0.693  Sum_probs=198.7

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|.....++|+||||+++||||||||+..      ...+.|++|..+...  ...+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i~   74 (235)
T 2wph_S            1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVET------GVKITVVAGEHNIEETEHTEQKRNVIRII   74 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEESSSTTCEEEEEEETTEEEECGGGCCT------TSCCEEEESCCBTTSCCSCCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEccCCCeeEEEEEEeCCEEEECHHHCcC------CCCEEEEEcccccCCCCCCcEEeeeEEEE
Confidence            689999999999999999887788999999999999999999965      235789999887653  345678999999


Q ss_pred             ECCCCCC--CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC---CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        195 FHPSHSC--SSFNNDIALLELTRSIQWSDLIRPACLPSGSLD---YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       195 ~hp~y~~--~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~---~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .||+|+.  ....||||||||++|+.|++.++|||||.....   ..+..++++|||.+......   +..|++..++++
T Consensus        75 ~Hp~y~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~  151 (235)
T 2wph_S           75 PHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRS---ALVLQYLRVPLV  151 (235)
T ss_dssp             ECTTTTSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCB---CSBCEEEEEEEE
T ss_pred             eCCCCcccCCcCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCc---cchheEeeeeee
Confidence            9999998  678899999999999999999999999975431   24678999999998765433   778999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|...+.     ..+.+.||||+...+..+.|                              .|||||||++..+++
T Consensus       152 ~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~~~~  196 (235)
T 2wph_S          152 DRATCLRSTK-----FTITNNMFCAGFHEGGRDSC------------------------------QGDSGGPHVTEVEGT  196 (235)
T ss_dssp             CHHHHHHTCS-----SCCCTTEEEESCTTCSCBCC------------------------------TTCTTCEEEEEETTE
T ss_pred             CHHHhcCccc-----CCCCCCEEEeCCCCCCCccC------------------------------CCCCCCceEEeECCe
Confidence            9999988664     25788999998766678899                              999999999998899


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|+||+|||.+|..++.|+|||||+.|++||+++++.
T Consensus       197 ~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~  234 (235)
T 2wph_S          197 SFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKL  234 (235)
T ss_dssp             EEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHCCC
T ss_pred             EEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHhc
Confidence            99999999999999888999999999999999999864

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=100.00  E-value=3.4e-51  Score=367.44  Aligned_cols=239  Identities=37%  Similarity=0.778  Sum_probs=200.8

Q ss_pred             CCCCCccCC--CCCeEecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccC
Q psy13815        104 PCGRSLASR--RTGKIVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL  180 (388)
Q Consensus       104 ~cg~~~~~~--~~~~i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~  180 (388)
                      .||.+....  ...||+||.++.+++|||+|+|+.. +.++|+||||+++||||||||+...   .....+.|++|.++.
T Consensus         3 ~cg~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~   79 (247)
T 1ddj_A            3 DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKS---PRPSSYKVILGAHQE   79 (247)
T ss_dssp             CTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGTTC---SCGGGCEEEESCSBS
T ss_pred             ccCCCCCCCcccCCCcCCCEECCCCCCCcEEEEEcCCCCeEEEEEEeeCCEEEEcHHHcCCC---CCCccEEEEEccccc
Confidence            477654321  2469999999999999999999864 5789999999999999999999762   234667899998776


Q ss_pred             C--CCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCC
Q psy13815        181 S--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRR  257 (388)
Q Consensus       181 ~--~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~  257 (388)
                      .  ....+.+.|.+++.||.      .||||||||++|+.|++.++|||||..... ..+..++++|||.+....    .
T Consensus        80 ~~~~~~~~~~~v~~~~~hp~------~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~----~  149 (247)
T 1ddj_A           80 VNLEPHVQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTF----G  149 (247)
T ss_dssp             SSCCTTCEEEEEEEEEECTT------SCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSST----T
T ss_pred             CccCCceEEEEeeeEEcCCC------CCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCC----C
Confidence            4  33456788999999996      479999999999999999999999986643 567899999999886432    2


Q ss_pred             CccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCc
Q psy13815        258 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD  337 (388)
Q Consensus       258 ~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd  337 (388)
                      +..|+++.+++++.++|+....   ....+.+.||||+...++.+.|                              +||
T Consensus       150 ~~~L~~~~~~i~~~~~C~~~~~---~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GD  196 (247)
T 1ddj_A          150 AGLLKEAQLPVIENKVCNRYEF---LNGRVQSTELCAGHLAGGTDSC------------------------------QGD  196 (247)
T ss_dssp             TTBCEEEEEEEECHHHHTSTTT---TTTCCCTTEEEESCSSSCCCBC------------------------------CSC
T ss_pred             CccceEEeeeecCHHHhcchhc---cCCCCcCCeEeecCCCCCCccc------------------------------cCc
Confidence            6789999999999999986432   1235788999998766678899                              999


Q ss_pred             CCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        338 SGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       338 sGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      |||||++..+++|+|+||+|||.+|..++.|+|||||+.|++||+++|+.+
T Consensus       197 SGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~n  247 (247)
T 1ddj_A          197 AGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRNN  247 (247)
T ss_dssp             TTCEEEEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHHHTC
T ss_pred             CcCcEEEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHhhcC
Confidence            999999998899999999999999998889999999999999999998753

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=100.00  E-value=3.3e-51  Score=366.09  Aligned_cols=231  Identities=32%  Similarity=0.603  Sum_probs=198.6

Q ss_pred             CeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEE
Q psy13815        115 GKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLR  192 (388)
Q Consensus       115 ~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~  192 (388)
                      .||+||.++.+++|||+|+|...+.++|+||||+++||||||||+...   .....+.|++|..+...  ...+.+.|.+
T Consensus         1 ~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~~~~~~~~~~v~~   77 (240)
T 1mza_A            1 MEIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRF---TKGQSPTVVLGAHSLSKNEASKQTLEIKK   77 (240)
T ss_dssp             CCCCCCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGSCTT---CSCSCEEEEESCSBSSSCCTTCEEEEEEE
T ss_pred             CceECCEECCCCCCCeEEEEeeCCceEEEEEEecCCEEEECHHhCCCC---CCCCCeEEEeCceecCCCCCceEEEEEEE
Confidence            379999999999999999999888899999999999999999998652   23456889999887653  3357889999


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      ++.||+|+.....||||||+|++|+.|++.++|||||.......+..++++|||.+.....  ..+..|+++.+++++.+
T Consensus        78 i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~--~~~~~L~~~~~~i~~~~  155 (240)
T 1mza_A           78 FIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSL--RPSDTLREVTVTVLSRK  155 (240)
T ss_dssp             EEECCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCS--SCCSBCEEEEEEECCHH
T ss_pred             EEeCCCccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCC--CccccceEeEEEEeCHH
Confidence            9999999998889999999999999999999999999843336788999999999876543  12678999999999999


Q ss_pred             hhh--hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        273 VCQ--AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       273 ~C~--~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      +|+  ..+.   ....+.+.||||+...+..+.|                              +|||||||++..    
T Consensus       156 ~C~~~~~~~---~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGGPL~~~~----  198 (240)
T 1mza_A          156 LCNSQSYYN---GDPFITKDMVCAGDAKGQKDSC------------------------------KGDAGGPLICKG----  198 (240)
T ss_dssp             HHTSTTTTT---TTTCCCTTEEEEECTTSCCCCC------------------------------TTCTTCEEEETT----
T ss_pred             HcCCcceeC---CCCcCCCCeEeecCCCCCCccC------------------------------CCCCCCeeEECC----
Confidence            998  4443   1124688999999766678899                              999999999953    


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCC-chhHHhhhhcc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTR-YIGWISDTLDI  387 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~-~~~WI~~~i~~  387 (388)
                      +|+||+|||.+|+.++.|++||+|+. |++||+++++.
T Consensus       199 ~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~~~~  236 (240)
T 1mza_A          199 VFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNLVP  236 (240)
T ss_dssp             EEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHHTCC
T ss_pred             EEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHhccC
Confidence            79999999999998889999999999 99999999863

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=100.00  E-value=1.9e-51  Score=367.83  Aligned_cols=227  Identities=33%  Similarity=0.599  Sum_probs=197.9

Q ss_pred             EecceecCCCCcceEEEEcc-CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~-~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|.. .+.++|+||||+++||||||||+..      ...+.|++|..+..  ....+.+.|.++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAhC~~~------~~~~~V~~G~~~~~~~~~~~~~~~v~~i   74 (241)
T 2jkh_A            1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ------AKRFKVRVGDRNTEQEEGGEAVHEVEVV   74 (241)
T ss_dssp             CBSSEECCTTSSTTEEEEECTTSCEEEEEEECSSSEEEECGGGGGS------CSSCEEEESCSBTTCCCSCCEEECEEEE
T ss_pred             CCCCEECCCCCcCcEEEEEcCCCCcEEEEEEeeCCEEEEcHHHcCC------CCcEEEEECCccCCCCCCCcEEEEeEEE
Confidence            68999999999999999974 4578999999999999999999965      23578999987765  234567899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC----CCCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL----DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~----~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      +.||+|+.....||||||+|++|+.|++.++|||||....    ...+..++++|||.+......   +..|++..++++
T Consensus        75 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~  151 (241)
T 2jkh_A           75 IKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQ---STRLKMLEVPYV  151 (241)
T ss_dssp             EECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCB---CSBCEEEEEEEE
T ss_pred             EeCCCCCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCc---CccccEeeeccc
Confidence            9999999988899999999999999999999999997542    146788999999998765432   678999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|+..+.     ..+.+.||||+...+..+.|                              .|||||||++..+++
T Consensus       152 ~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~~~~  196 (241)
T 2jkh_A          152 DRNSCKLSSS-----FIITQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFKDT  196 (241)
T ss_dssp             CHHHHHHHCS-----SCCCTTEEEESCSSSSCBCC------------------------------TTTTTCEEEEEETTE
T ss_pred             cHHHhccccc-----CcCCCCeEEeeCCCCCCccC------------------------------cCcCCCeeEEEECCE
Confidence            9999988664     25788999998766677889                              999999999998899


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|+||+|||.+|...+.|++||||+.|++||+++++.
T Consensus       197 ~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~  234 (241)
T 2jkh_A          197 YFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT  234 (241)
T ss_dssp             EEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred             EEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhcc
Confidence            99999999999999888999999999999999999864

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=100.00  E-value=2.2e-51  Score=367.19  Aligned_cols=228  Identities=34%  Similarity=0.611  Sum_probs=196.7

Q ss_pred             EecceecCCCCcceEEEEccC-C---ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--Cceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-G---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~---~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|... +   .++|+||||+++||||||||+..      ...+.|++|..+...  ...+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~------~~~~~v~~G~~~~~~~~~~~~~~~v   74 (240)
T 1gvk_B            1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR------ELTFRVVVGEHNLNQNNGTEQYVGV   74 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCS------CCCEEEEESCSBTTSCCSCCEEEEE
T ss_pred             CCCCeECCCCCcCEEEEEEecCCCccCceEEEEEeeCCEEEECHHHCCC------CcceEEEECCeecccCCCcceEEEE
Confidence            689999999999999999852 3   48999999999999999999965      356889999987753  34567899


Q ss_pred             EEEEECCCCCCCCC--CCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEE
Q psy13815        191 LRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALS  267 (388)
Q Consensus       191 ~~i~~hp~y~~~~~--~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~  267 (388)
                      ++++.||+|+....  .||||||+|++|+.|++.++|+|||..... ..+..++++|||.+......   +..|++..++
T Consensus        75 ~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~  151 (240)
T 1gvk_B           75 QKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQL---AQTLQQAYLP  151 (240)
T ss_dssp             EEEEECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCB---CSBCEEEECC
T ss_pred             EEEEECCCCCCCCCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCc---chhccEEEEE
Confidence            99999999998777  899999999999999999999999987643 56889999999998765433   7789999999


Q ss_pred             eechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecC
Q psy13815        268 VVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA  347 (388)
Q Consensus       268 i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~  347 (388)
                      +++.++|+..+.   ....+.+.||||+. .+..+.|                              +|||||||++..+
T Consensus       152 ~~~~~~C~~~~~---~~~~~~~~~~Ca~~-~~~~~~C------------------------------~GDSGgPL~~~~~  197 (240)
T 1gvk_B          152 TVDYAICSSSSY---WGSTVKNSMVCAGG-DGVRSGC------------------------------QGDSGGPLHCLVN  197 (240)
T ss_dssp             EECHHHHTSTTT---TGGGCCTTEEEECC-SSSCBCC------------------------------TTCTTCEEEEEET
T ss_pred             EEcHHHhccccc---cCccCCcceEeecC-CCCCccc------------------------------CCCCcCceEEEEC
Confidence            999999987532   12247889999984 4567889                              9999999999888


Q ss_pred             CccEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        348 ESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       348 ~~~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ++|+|+||+|||.  +|..++.|+|||||+.|++||+++|+.
T Consensus       198 g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~~  239 (240)
T 1gvk_B          198 GQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIAS  239 (240)
T ss_dssp             TEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHHH
T ss_pred             CcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHhc
Confidence            9999999999995  798888999999999999999999875

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=100.00  E-value=4.8e-51  Score=366.21  Aligned_cols=235  Identities=36%  Similarity=0.651  Sum_probs=198.7

Q ss_pred             EecceecCCCCcceEEEEccC-C--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-G--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|+.. +  .++|+||||+++||||||||+...  ......+.|.+|..+... ..+.+.|+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~--~~~~~~~~v~~g~~~~~~-~~~~~~v~~i   77 (245)
T 2f9n_A            1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPD--VKDLATLRVQLREQHLYY-QDQLLPVSRI   77 (245)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGCSS--CCCGGGEEEECSCSBTTT-TCCCBCEEEE
T ss_pred             CCCCeECCCCCCCcEEEEEEcCCCcceEEEEEEeeCCEEEECHHhCCCC--CCCcceEEEEeCCccccc-CceEEEEEEE
Confidence            689999999999999999863 3  579999999999999999999642  134567889999877653 3457899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      +.||+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+...... ..+..|+++.+++++.+
T Consensus        78 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~-~~~~~L~~~~~~~~~~~  156 (245)
T 2f9n_A           78 IVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPL-PPPFPLKQVKVPIMENH  156 (245)
T ss_dssp             EECTTCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCC-CTTCBCEEEECCEECHH
T ss_pred             EECCCccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCC-CccccceEEEEEEcCHH
Confidence            99999999888999999999999999999999999976543 57889999999988754321 11357999999999999


Q ss_pred             hhhhHhhcCCC----ccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCC
Q psy13815        273 VCQAWYQSEGK----KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE  348 (388)
Q Consensus       273 ~C~~~~~~~~~----~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~  348 (388)
                      +|+..+.....    ...+.+.||||+.  .+.+.|                              .|||||||++..++
T Consensus       157 ~C~~~~~~~~~~~~~~~~~~~~~~Ca~~--~~~~~C------------------------------~GDSGgPL~~~~~g  204 (245)
T 2f9n_A          157 ICDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSC------------------------------QGDSGGPLVCKVNG  204 (245)
T ss_dssp             HHHHHHHTTCCSCTTSCCSCTTEEEECC--SSSBCC------------------------------TTCTTCEEEEEETT
T ss_pred             HhhhhhcccccccccccccccccEeecC--CCCCcC------------------------------CCCCCCceEEEECC
Confidence            99988753211    1246889999973  457889                              99999999999889


Q ss_pred             ccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       349 ~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+|+||+|||.+|..++.|++||||+.|++||+++++.
T Consensus       205 ~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~  243 (245)
T 2f9n_A          205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPK  243 (245)
T ss_dssp             EEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHSCC
T ss_pred             EEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHhhc
Confidence            999999999999998888999999999999999999865

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=100.00  E-value=4.4e-51  Score=364.92  Aligned_cols=225  Identities=31%  Similarity=0.608  Sum_probs=196.0

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|+.++.++|+||||+++||||||||+...     ...+.|++|..+..... +.+.|.+++.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~-----~~~~~v~~G~~~~~~~~-~~~~v~~i~~H   74 (240)
T 2zgc_A            1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQR-----MAQLRLVLGLHTLDSPG-LTFHIKAAIQH   74 (240)
T ss_dssp             CBTCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGCSC-----GGGEEEEESCSBSSSCC-EEEEEEEEEEC
T ss_pred             CCCCEECCCCCcCcEEEEEeCCCeEEEEEEEcCCEEEEcHHhcCCC-----CCCEEEEecccccCCCC-eEEEEEEEEEC
Confidence            6899999999999999999888899999999999999999999751     23688999988776543 67899999999


Q ss_pred             CCCCCCC-CCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        197 PSHSCSS-FNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       197 p~y~~~~-~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      |+|+... ..||||||||++|+.|++.++|||||..... ..+..++++|||.+.....   .+..|+++.+++++.++|
T Consensus        75 p~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~---~~~~L~~~~~~~~~~~~C  151 (240)
T 2zgc_A           75 PRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGR---LSRVLRELDLQVLDTRMC  151 (240)
T ss_dssp             TTCBCTTSCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCC---BCSBCEEEEEEECCHHHH
T ss_pred             CCCCCCCCCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCC---cCceeeeeeeeecCHHHh
Confidence            9999876 8899999999999999999999999986643 5788999999999875443   377899999999999999


Q ss_pred             hh--HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        275 QA--WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       275 ~~--~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      +.  .+.     ..+.+.|||++...+..+.|                              .|||||||++..  .|+|
T Consensus       152 ~~~~~~~-----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~--~~~l  194 (240)
T 2zgc_A          152 NNSRFWN-----GSLSPSMVCLAADSKDQAPC------------------------------KGDSGGPLVCGK--GRVL  194 (240)
T ss_dssp             TSTTTTT-----TCCCTTEEEEECSSTTCBCC------------------------------TTCTTCEEEETT--TTEE
T ss_pred             CCccccC-----CCCCCceEeeccCCCCCccC------------------------------CCCccCeeEECC--CCEE
Confidence            87  333     24678999998766678889                              999999999954  4899


Q ss_pred             EEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        353 IGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       353 ~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +||+||| ..|...+.|+|||||+.|++||+++++.
T Consensus       195 ~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~  230 (240)
T 2zgc_A          195 AGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGR  230 (240)
T ss_dssp             EEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCC
T ss_pred             EEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhh
Confidence            9999999 6898888899999999999999999864

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=100.00  E-value=4.1e-51  Score=373.27  Aligned_cols=248  Identities=29%  Similarity=0.488  Sum_probs=206.3

Q ss_pred             CCCCCCCccCCCCCeEecceecCCCCcceEEEEccCC-----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEec
Q psy13815        102 GVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG-----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK  176 (388)
Q Consensus       102 ~~~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~~~-----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g  176 (388)
                      ...||.+... ...||+||.++.+++|||||+|+.+.     .++|+||||+++||||||||+.+   ......+.|.+|
T Consensus        10 ~~~CG~~~~~-~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~~---~~~~~~~~v~~g   85 (276)
T 2vnt_A           10 KFQCGQKTLR-PRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFID---YPKKEDYIVYLG   85 (276)
T ss_dssp             CCCTTCCCC------CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTTT---CCCGGGEEEEES
T ss_pred             CCCCCCcCCC-CCCcEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECcccccC---CCCCccEEEEee
Confidence            3579987643 45799999999999999999997543     47899999999999999999976   234566788888


Q ss_pred             cccCC--CCceeeeceEEEEECCCCCCCC--CCCcEEEEEeCCCC----CCCCCeeeeeCCCCCCC-CCCCeEEEEEccc
Q psy13815        177 EHDLS--RPSISTVPVLRIMFHPSHSCSS--FNNDIALLELTRSI----QWSDLIRPACLPSGSLD-YSEQSVTVAGWGW  247 (388)
Q Consensus       177 ~~~~~--~~~~~~~~v~~i~~hp~y~~~~--~~~DIALl~L~~~v----~~~~~v~picLp~~~~~-~~~~~~~~~GwG~  247 (388)
                      ..+..  ....+.+.|.+++.||+|+...  .++|||||+|+.++    .+++.++|||||..... ..+..+.++|||.
T Consensus        86 ~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~  165 (276)
T 2vnt_A           86 RSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGK  165 (276)
T ss_dssp             CCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCC
T ss_pred             eeeccCCCCceEEEEEEEEEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeec
Confidence            87765  4456788999999999998654  45899999998765    57899999999987654 6688999999998


Q ss_pred             cCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCC
Q psy13815        248 TNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSG  327 (388)
Q Consensus       248 ~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~  327 (388)
                      +......  .+..++.+.+++++.++|...+.   ........++|++...+..+.|                       
T Consensus       166 ~~~~~~~--~~~~l~~~~~~i~~~~~C~~~~~---~~~~~~~~~~~~~~~~~~~~~C-----------------------  217 (276)
T 2vnt_A          166 ENSTDYL--YPEQLKMTVVKLISHRECQQPHY---YGSEVTTKMLCAADPQWKTDSC-----------------------  217 (276)
T ss_dssp             SSTTCSC--CCSBCEEEEEEEECHHHHTSTTT---TGGGSCTTEEEEECTTSCCCCC-----------------------
T ss_pred             cccCCCC--cchhheeeeeeEecHHHhhhhhc---cCcccCccceeeccCCCCCCCC-----------------------
Confidence            8765432  36789999999999999988765   2335677899998887888999                       


Q ss_pred             CCCCCCCCCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        328 VHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       328 ~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                             .|||||||++..+++|+|+||+|||.+|+.++.|+|||||+.|++||+++|+.+
T Consensus       218 -------~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~WI~~~~~~~  271 (276)
T 2vnt_A          218 -------QGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTKEE  271 (276)
T ss_dssp             -------TTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHSCC
T ss_pred             -------CCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhhhh
Confidence                   999999999999999999999999999998899999999999999999999753

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=100.00  E-value=4.4e-51  Score=368.04  Aligned_cols=232  Identities=30%  Similarity=0.614  Sum_probs=197.8

Q ss_pred             EecceecCCCCcceEEEEccC------CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeee
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH------GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTV  188 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~------~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~  188 (388)
                      |+||.++.+++|||+|+|+..      ..++|+||||+++||||||||+..   ......+.|++|..+..  ....+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~---~~~~~~~~V~~G~~~~~~~~~~~~~~   77 (252)
T 1rtf_B            1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQE---RFPPHHLTVILGRTYRVVPGEEEQKF   77 (252)
T ss_dssp             CBSSEECCGGGSTTEEEEEEEC----CEEEEEEEEECSSSEEEECGGGGTT---CCCGGGEEEEESCSBSSSCCTTCEEE
T ss_pred             CCCCeECCCCCcCCEEEEEEecCCCCCCCEEEEEEEEeCCEEEECHHHCCC---CCCcccEEEEeCcccccCCCCcceEE
Confidence            689999999999999999742      357999999999999999999976   23456789999987764  2345788


Q ss_pred             ceEEEEECCCCCCCCCCCcEEEEEeCCC----CCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceE
Q psy13815        189 PVLRIMFHPSHSCSSFNNDIALLELTRS----IQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQK  263 (388)
Q Consensus       189 ~v~~i~~hp~y~~~~~~~DIALl~L~~~----v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~  263 (388)
                      .|.+++.||+|+.....||||||+|++|    +.|++.++|||||..... ..+..++++|||.+.....  ..+..|++
T Consensus        78 ~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~--~~~~~L~~  155 (252)
T 1rtf_B           78 EVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSP--FYSERLKE  155 (252)
T ss_dssp             EEEEEEECTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCS--SCCSBCEE
T ss_pred             EEEEEEeCCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCc--cccchheE
Confidence            9999999999999889999999999999    889999999999987643 5678999999998875432  12678999


Q ss_pred             EEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCC------cCcccCCcccCCcccccccccCCCCCCCCCCCCCCCc
Q psy13815        264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGG------KDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD  337 (388)
Q Consensus       264 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~------~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd  337 (388)
                      ..+++++.++|+..+..   ...+.++||||+...++      .+.|                              .||
T Consensus       156 ~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~~~~~~~C------------------------------~GD  202 (252)
T 1rtf_B          156 AHVRLYPSSRCTSQHLL---NRTVTDNMLCAGDTRSGGPQANLHDAC------------------------------QGD  202 (252)
T ss_dssp             EEEEECCGGGSSTTTTT---TCCCCTTEEEEECCC------CCCBCC------------------------------TTC
T ss_pred             eeeEEecHHHhhhhhcc---CCCCCCCEEEecCCCCCCccCCCCccc------------------------------cCC
Confidence            99999999999876531   23578899999876544      6788                              999


Q ss_pred             CCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        338 SGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       338 sGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |||||++..+++|+|+||+|||.+|...+.|++||||+.|++||+++|+
T Consensus       203 sGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~  251 (252)
T 1rtf_B          203 SGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNMR  251 (252)
T ss_dssp             TTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred             CcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHHHHHHHHhcC
Confidence            9999999988999999999999999988899999999999999999885

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=100.00  E-value=4.4e-51  Score=362.30  Aligned_cols=223  Identities=35%  Similarity=0.668  Sum_probs=195.3

Q ss_pred             EecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|+.. +.++|+||||+++||||||||+..      ...+.|++|..+..  ....+.+.|.++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~------~~~~~V~~G~~~~~~~~~~~~~~~v~~i   74 (228)
T 1fxy_A            1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ------AKRFKVRVGDRNTEQEEGGEAVHEVEVV   74 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGTTS------CSSCEEEEECSCTTTCCCCEEEEEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEEcCCCCeeEEEEEeeCCEEEECHHHCCC------CCcEEEEECccCccccCCCcEEEEEEEE
Confidence            689999999999999999865 578999999999999999999954      25678899987765  334567899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      +.||+|+.....||||||||++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++..+++++.++
T Consensus        75 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~l~~~~~~~~~~~~  151 (228)
T 1fxy_A           75 IKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPP-ATGTKCLISGWGNTASSGA--DYPDELQCLDAPVLSQAK  151 (228)
T ss_dssp             EECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCCCSSSC--CCCSSCEEEEEEBCCHHH
T ss_pred             EECCCCCCCCCcCcEEEEEECCcccCCCceeccCCCCCCC-CCCCEEEEEecCccCCCCC--CCCccceEEEEEEeCHHH
Confidence            9999999988999999999999999999999999998765 6788999999998865433  126789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |+..+..     .+.+.|||++...++.+.|                              +|||||||++..    +|+
T Consensus       152 C~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----~l~  192 (228)
T 1fxy_A          152 CEASYPG-----KITSNMFCVGFLEGGKDSC------------------------------QGDSGGPVVCNG----QLQ  192 (228)
T ss_dssp             HHHHSTT-----TCCTTEEEESCTTCSCBCC------------------------------TTCTTCEEEETT----EEE
T ss_pred             hHhhcCC-----CCCCCEEEeccCCCCCccc------------------------------cCccccceEECC----EEE
Confidence            9987752     4688999998766778899                              999999999964    799


Q ss_pred             EEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       354 Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ||+|||.+|...+.|++||||+.|++||+++|+.
T Consensus       193 Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~  226 (228)
T 1fxy_A          193 GVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAA  226 (228)
T ss_dssp             EEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCCEEEEEhHHHHHHHHHHHhc
Confidence            9999999998888999999999999999999864

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=100.00  E-value=1.1e-50  Score=364.60  Aligned_cols=232  Identities=30%  Similarity=0.621  Sum_probs=199.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+.. .++|+||||+++||||||||+...   .....+.|++|..+...  ...+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~CgGsLIs~~~VLTAAHC~~~~---~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~   76 (248)
T 2r0l_A            1 IIGGSSSLPGSHPWLAAIYIG-DSFCAGSLVHTCWVVSAAHCFSHS---PPRDSVSVVLGQHFFNRTTDVTQTFGIEKYI   76 (248)
T ss_dssp             CBSCEECCTTSSTTEEEEEET-TEEEEEEEEETTEEEECGGGGTTC---CCGGGEEEEESCCBTTCCCSSCEEECEEEEE
T ss_pred             CCCCccCCCCCCCeEEEEEcC-CceEEEEEEcCCEEEECHHHcCCC---CCcCcEEEEEEeEEcCCCCCccEEEeeeEEE
Confidence            689999999999999999865 689999999999999999999762   22467899999887753  345788999999


Q ss_pred             ECCCCCC-CCCCCcEEEEEeCCC----CCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEe
Q psy13815        195 FHPSHSC-SSFNNDIALLELTRS----IQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSV  268 (388)
Q Consensus       195 ~hp~y~~-~~~~~DIALl~L~~~----v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i  268 (388)
                      .||.|+. ....||||||+|++|    +.|++.++|||||..... ..+..++++|||.+......  .+..|++..+++
T Consensus        77 ~hp~y~~~~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~--~~~~L~~~~~~~  154 (248)
T 2r0l_A           77 PYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSG--YSSSLREALVPL  154 (248)
T ss_dssp             ECTTCCTTSTTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCS--CCSBCEEEEEEB
T ss_pred             eCCccCcCCCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCC--CCchheEEEEee
Confidence            9999998 778899999999999    889999999999986543 57889999999988764321  267899999999


Q ss_pred             echhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCC
Q psy13815        269 VSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE  348 (388)
Q Consensus       269 ~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~  348 (388)
                      ++.++|+....   ....+.+.|||++...+..+.|                              .|||||||++..++
T Consensus       155 ~~~~~C~~~~~---~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~~g  201 (248)
T 2r0l_A          155 VADHKCSSPEV---YGADISPNMLCAGYFDCKSDAC------------------------------QGDSGGPLACEKNG  201 (248)
T ss_dssp             CCHHHHTSTTT---TGGGCCTTEEEESCSSSCCBCC------------------------------TTCTTCEEEEEETT
T ss_pred             eCHHHhCCccc---cCCcCCCCEEeECCCCCCCcCC------------------------------CCccCCeEEEEECC
Confidence            99999986432   1235788999998766678889                              99999999999889


Q ss_pred             ccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       349 ~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+|+||+|||.+|...+.|++||||+.|++||+++++.
T Consensus       202 ~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~  240 (248)
T 2r0l_A          202 VAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIRP  240 (248)
T ss_dssp             EEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHHC-
T ss_pred             cEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHHhcC
Confidence            999999999999999888999999999999999999864

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=100.00  E-value=1.2e-50  Score=358.27  Aligned_cols=218  Identities=36%  Similarity=0.658  Sum_probs=192.8

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC---CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS---RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+.+        .+.|.+|.....   ....+.+.|.++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~--------~~~v~~g~~~~~~~~~~~~~~~~v~~~   72 (223)
T 2bdg_A            1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQN--------SYTIGLGLHSLEADQEPGSQMVEASLS   72 (223)
T ss_dssp             CBTCEECCTTSSTTEEEEECSSCEEEEEEEEETTEEEECGGGCCS--------SEEEEESCSBSCGGGCTTCEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEeeCCCEEEEEEEecCCEEEEhHHhCCC--------CeEEEEeeeecCCCCCCCcEEEEEEEE
Confidence            689999999999999999988889999999999999999999953        467889987664   334567899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      +.||+|+.....||||||||++|+.|++.++|||||.... ..+..++++|||.+....    .+..|++..+++++.++
T Consensus        73 ~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~~~----~~~~L~~~~~~~~~~~~  147 (223)
T 2bdg_A           73 VRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQCP-TAGNSCLVSGWGLLANGR----MPTVLQCVNVSVVSEEV  147 (223)
T ss_dssp             EECTTTTSSTTCSCCEEEEESSCCCCCSSCCCCCBCSSCC-CTTCEEEEEESCCCTTSC----CCSBCEEEEEEBCCHHH
T ss_pred             EeCCCCCCCCCcCcEEEEEECCcccCCCceecccCCCCCC-CCCCEEEEEeCcccCCCC----CCCcceEEEEEEeCHHH
Confidence            9999999988999999999999999999999999998665 678899999999887542    27789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |+..+..     .+.+.||||+...+..+.|                              +|||||||++..    +|+
T Consensus       148 C~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPL~~~~----~l~  188 (223)
T 2bdg_A          148 CSKLYDP-----LYHPSMFCAGGGQDQKDSC------------------------------NGDSGGPLICNG----YLQ  188 (223)
T ss_dssp             HHHHSTT-----TCCTTEEEECCSTTCCBCC------------------------------TTCTTCEEEETT----EEE
T ss_pred             hhhhhCC-----CCCCCeEeccCCCCCCCcC------------------------------CCCCCchheEcc----EEE
Confidence            9987752     4688999998766678889                              999999999964    799


Q ss_pred             EEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        354 GLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       354 Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ||+|||. .|+.++.|++||||+.|++||+++|+
T Consensus       189 Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~  222 (223)
T 2bdg_A          189 GLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQ  222 (223)
T ss_dssp             EEEEECCSSTTCTTCCEEEECGGGTHHHHHHHHH
T ss_pred             EEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence            9999997 79988899999999999999999885

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=100.00  E-value=1e-50  Score=358.38  Aligned_cols=219  Identities=36%  Similarity=0.720  Sum_probs=193.0

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+. +.++|+||||+++||||||||+.+        .+.|++|..+..  ....+.+.|++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-~~~~CgGsLIs~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~~i~   71 (222)
T 1hj8_A            1 IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCYKS--------RVEVRLGEHNIKVTEGSEQFISSSRVI   71 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEES-SSEEEEEEEEETTEEEECGGGCCS--------SCEEEESCSBTTSCCSCCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCEEEEEEc-CCcEEEeEEecCCEEEECHHhcCC--------CeEEEEcccccccCCCCcEEEEEEEEE
Confidence            68999999999999999974 678999999999999999999852        457889987765  3445778999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .||+|+.....||||||||++|+.|++.++|||||.... ..+..++++|||.+......   +..|++..+++++.++|
T Consensus        72 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~~~~C  147 (222)
T 1hj8_A           72 RHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCA-PAGTMCTVSGWGNTMSSTAD---SNKLQCLNIPILSYSDC  147 (222)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSSCC-CTTCEEEEEESSCCCCSSCC---TTBCEEEEEEBCCHHHH
T ss_pred             ECCCCCCCCCCCcEEEEEECCcccCCCceeccCCCCCCC-CCCCEEEEEECCCCCCCCCC---CceeEEEEEEEcCHHHh
Confidence            999999988899999999999999999999999998765 67889999999988765433   77899999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+..     .+.+.||||+...+..+.|                              .|||||||+++.    +|+|
T Consensus       148 ~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----~l~G  188 (222)
T 1hj8_A          148 NNSYPG-----MITNAMFCAGYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG  188 (222)
T ss_dssp             HHHSTT-----CCCTTEEEESCTTSSCBCC------------------------------TTCTTCEEEETT----EEEE
T ss_pred             hhhccC-----CCCCCeEEeccCCCCCccC------------------------------CCCcccceEECC----EEEE
Confidence            987752     4688999998766678889                              999999999953    6999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|||.+|..++.|++||||+.|++||+++|+.
T Consensus       189 i~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~~~  221 (222)
T 1hj8_A          189 VVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMAS  221 (222)
T ss_dssp             EEEECSSSSCTTCCEEEEEGGGGHHHHHHHHHC
T ss_pred             EEeecCCCCCCCcCcEEEEhHHhHHHHHHHhhc
Confidence            999999999888999999999999999999864

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=100.00  E-value=2.3e-50  Score=356.67  Aligned_cols=222  Identities=33%  Similarity=0.632  Sum_probs=194.0

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|+....++|+||||+++||||||||+.        ..+.|++|..+......+.+.|.+++.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~--------~~~~v~~G~~~~~~~~~~~~~v~~~~~H   72 (224)
T 2qxi_A            1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKM--------NEYTVHLGSDTLGDRRAQRIKASKSFRH   72 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--------SCEEEEESCSBTTCTTSEEEEECEEEEC
T ss_pred             CCCCeECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEhHHcCC--------CCcEEEEeeeecCCCccEEEEEEEEEEC
Confidence            68999999999999999965444499999999999999999983        3578999998876556678899999999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA  276 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~  276 (388)
                      |+|+.....||||||+|++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++..+++++.++|+.
T Consensus        73 p~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~~~~~~~~~~~~C~~  149 (224)
T 2qxi_A           73 PGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCE-PPGTTCTVSGWGTTTSPDV--TFPSDLMCVDVKLISPQDCTK  149 (224)
T ss_dssp             TTCCTTTCTTCCEEEECSSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCSSSSSC--CCCSBCEEEEEEEECHHHHHH
T ss_pred             CCCCCCCCcCcEEEEEeCCCCcCCCceeeEECCCCCC-CCCCEEEEEeCCccCCCCC--CCChhheEEEeeecCHHHhhH
Confidence            9999988899999999999999999999999998765 6788999999998864321  126789999999999999998


Q ss_pred             HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEE
Q psy13815        277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV  356 (388)
Q Consensus       277 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~  356 (388)
                      .+..     .+.+.||||+...+..+.|                              .|||||||+++.    +|+||+
T Consensus       150 ~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----~l~Gi~  190 (224)
T 2qxi_A          150 VYKD-----LLENSMLCAGIPDSKKNAC------------------------------NGDSGGPLVCRG----TLQGLV  190 (224)
T ss_dssp             HHGG-----GCCTTEEEEECTTCCCBCC------------------------------TTCTTCEEEETT----EEEEEE
T ss_pred             HhcC-----cCCCCeEEecCCCCCCccC------------------------------CCCccccEEECC----EEEEEE
Confidence            8752     4688999999766678899                              999999999943    699999


Q ss_pred             Eec-CCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        357 STG-IGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       357 s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      ||| ..|..++.|++||||+.|++||+++++.+
T Consensus       191 S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~~  223 (224)
T 2qxi_A          191 SWGTFPCGQPNDPGVYTQVCKFTKWINDTMKKH  223 (224)
T ss_dssp             EECCSSSCCTTCCEEEEEGGGSHHHHHHHHHHT
T ss_pred             EeCCCCCCCCCCCeEEEEHHHHHHHHHHHHhcc
Confidence            999 68988889999999999999999998754

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=100.00  E-value=1.9e-50  Score=356.93  Aligned_cols=219  Identities=36%  Similarity=0.667  Sum_probs=193.2

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+..        .+.|++|..+..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~~i~   72 (223)
T 1lo6_A            1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKKP--------NLQVFLGKHNLRQRESSQEQSSVVRAV   72 (223)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCT--------TCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEecCCCEEEEeEEecCCEEEECccCCCC--------CeEEEEcceecCCCCCCcEEEEEEEEE
Confidence            689999999999999999887889999999999999999999852        467899988765  2345778999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .||+|+.....||||||+|++|+.|++.++|||||.... ..+..++++|||.+. ...   .+..|++..+++++.++|
T Consensus        73 ~Hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~-~~~---~~~~l~~~~~~~~~~~~C  147 (223)
T 1lo6_A           73 IHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCS-ANTTSCHILGWGKTA-DGD---FPDTIQCAYIHLVSREEC  147 (223)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCCTT-CCCCEEEEEESSCCT-TSS---CCSBCEEEEEEEECHHHH
T ss_pred             ECCCCCCCCCcCeEEEEEECCcccCCCceeecccCCCCC-CCCCEEEEEEECCCC-CCC---cCceeeEEEEEEeCHHHh
Confidence            999999988999999999999999999999999998766 678899999999886 222   377899999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+..     .+.++||||+...++.+.|                              .|||||||++..    +|+|
T Consensus       148 ~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPL~~~~----~l~G  188 (223)
T 1lo6_A          148 EHAYPG-----QITQNMLCAGDEKYGKDSC------------------------------QGDSGGPLVCGD----HLRG  188 (223)
T ss_dssp             HHHSTT-----TCCTTEEEEECTTTCCBCC------------------------------TTTTTCEEEETT----EEEE
T ss_pred             hhhhCC-----CCCCCeEEeecCCCCCeec------------------------------cccCCCcEEeCC----EEEE
Confidence            987752     4688999999876678899                              999999999954    6999


Q ss_pred             EEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        355 LVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       355 i~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+||| ..|...+.|++||||+.|++||+++|+.
T Consensus       189 i~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~  222 (223)
T 1lo6_A          189 LVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQA  222 (223)
T ss_dssp             EEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC-
T ss_pred             EEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhcc
Confidence            99999 6898888999999999999999999864

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=100.00  E-value=1.1e-50  Score=358.17  Aligned_cols=222  Identities=34%  Similarity=0.587  Sum_probs=192.7

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+...   .....+.|++|..+... ..+.+.|++++.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~-~~~~~~v~~~~~h   76 (222)
T 1eq9_A            1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGL---SNLNRLKVHVGTNYLSE-SGDVYDVEDAVVN   76 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTC---SCGGGEEEEESCSBTTS-CCEEEEEEEEEEC
T ss_pred             CCCCEECCCCCcceEEEEEeCCCeEEEEEEeeCCEEEEhhhcCCCC---CCCceEEEEECceecCC-CCeEEEEEEEEEC
Confidence            6899999999999999999888899999999999999999999752   22567899999887643 3467899999999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA  276 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~  276 (388)
                      |+|+.....||||||+|++|+.|++.++|||||.......+..++++|||.+......   +..|++..+++++.++|++
T Consensus        77 p~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~~~~C~~  153 (222)
T 1eq9_A           77 KNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNT---PNALQEIELIVHPQKQCER  153 (222)
T ss_dssp             TTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCC---CSBCEEEEEEEECHHHHHH
T ss_pred             CCCCCCCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcc---cchheEeEEEEeCHHHhCc
Confidence            9999988899999999999999999999999998765467788999999998765433   7789999999999999984


Q ss_pred             HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEE
Q psy13815        277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV  356 (388)
Q Consensus       277 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~  356 (388)
                      ...      .+.+.|+|++. ..+.+.|                              .|||||||+++.    +|+||+
T Consensus       154 ~~~------~~~~~~~Ca~~-~~~~~~C------------------------------~GDSGgPL~~~~----~l~GI~  192 (222)
T 1eq9_A          154 DQW------RVIDSHICTLT-KRGEGAC------------------------------HGDSGGPLVANG----AQIGIV  192 (222)
T ss_dssp             HSS------SCCTTEEEECC-CTTCBCC------------------------------TTCTTCEEEETT----EEEEEE
T ss_pred             ccC------CCCccEEeecC-CCCCeee------------------------------eCCccceEEECC----EEEEEE
Confidence            321      26789999986 3467889                              999999999953    799999


Q ss_pred             EecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        357 STGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       357 s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |||.+|.. +.|++||||+.|++||+++|++
T Consensus       193 S~g~~C~~-~~p~vyt~V~~~~~WI~~~~~~  222 (222)
T 1eq9_A          193 SFGSPCAL-GEPDVYTRVSSFVSWINANLKK  222 (222)
T ss_dssp             EECSTTTS-SSCEEEEEGGGGHHHHHHTSCC
T ss_pred             EECCCcCC-CCCCEEEEHHHHHHHHHHHhhC
Confidence            99999986 7899999999999999999863

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=100.00  E-value=1.8e-50  Score=361.61  Aligned_cols=230  Identities=33%  Similarity=0.656  Sum_probs=197.3

Q ss_pred             EecceecCCCCcceEEEEccCC---ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC-CceeeeceEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR-PSISTVPVLR  192 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~---~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~-~~~~~~~v~~  192 (388)
                      |+||.++.+++|||+|+|....   .++|+||||+++||||||||+..    .....+.|++|..+... ...+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~~~~~~~~~~v~~   76 (241)
T 1m9u_A            1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDG----VLPNNIRVIAGLWQQSDTSGTQTANVDS   76 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEEESSSEEEEEEEEECSSSEEEECHHHHTT----CCGGGEEEEESCSBTTCCTTCEEEEEEE
T ss_pred             CCCCeECCCCCcCeEEEEEecCCceeeeeEEEEEeCCEEEecHHhCCC----CCcceEEEEEEeecCCCCCCceEEEEEE
Confidence            6899999999999999998643   48999999999999999999976    24567899999887753 3457889999


Q ss_pred             EEECCCC--CCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCC-CCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        193 IMFHPSH--SCSSFNNDIALLELTRSIQWSDLIRPACLPSG-SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       193 i~~hp~y--~~~~~~~DIALl~L~~~v~~~~~v~picLp~~-~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      +++||+|  +.....||||||+|++|+.|++.++|||||.. .....+..++++|||.+......   +..|++..++++
T Consensus        77 i~~hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~  153 (241)
T 1m9u_A           77 YTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNL---PDILQKSSIPVI  153 (241)
T ss_dssp             EEECTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCC---CSBCEEEEEEBC
T ss_pred             EEeCCCcCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCc---ccceeEeeEEEE
Confidence            9999999  77778899999999999999999999999987 33357889999999998765433   788999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|+..+.... ...+.++||||+...+..+.|                              .|||||||++.. ++
T Consensus       154 ~~~~C~~~~~~~~-~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~-~~  201 (241)
T 1m9u_A          154 TTAQCTAAMVGVG-GANIWDNHICVQDPAGNTGAC------------------------------NGDSGGPLNCPD-GG  201 (241)
T ss_dssp             CHHHHHHHHTTST-TCCCCTTEEEECCTTSCCBCC------------------------------TTCTTCEEEEES-SS
T ss_pred             cHHHhhhhhcccC-CCcccCCcEEECcCCCCCeee------------------------------cCcCCccEEEeC-CC
Confidence            9999998765211 113788999998766678899                              999999999986 88


Q ss_pred             cEEEEEEEe----cCCCCCCCCCeEEEeCCCchhHHhhhh
Q psy13815        350 TQVIGLVST----GIGCARPRLPGLYTRLTRYIGWISDTL  385 (388)
Q Consensus       350 ~~l~Gi~s~----g~~c~~~~~p~v~t~V~~~~~WI~~~i  385 (388)
                      |+|+||+||    +.+|..++.|++||||+.|++||+++|
T Consensus       202 ~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~~~  241 (241)
T 1m9u_A          202 TRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDNS  241 (241)
T ss_dssp             EEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHHHC
T ss_pred             EEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhhhC
Confidence            999999999    467988889999999999999999875

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=100.00  E-value=2e-50  Score=356.71  Aligned_cols=220  Identities=35%  Similarity=0.725  Sum_probs=192.3

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+ .+.++|+||||+++||||||||+.        ..+.|++|..+..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~-~~~~~CgGsLIs~~~VLTAAHC~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~   71 (223)
T 3mfj_A            1 IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYK--------SGIQVRLGEDNINVVEGNEQFISASKSI   71 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-SSSEEEEEEEEETTEEEECGGGCC--------SSCEEEESCSSTTSCCSCCEEEEEEEEE
T ss_pred             CCCCEECCCCcCCEEEEEE-cCCeEEEEEEecCCEEEEhHHhcC--------CCcEEEECCceecccCCCcEEEEeeEEE
Confidence            6899999999999999994 567899999999999999999983        3467899988764  3445778999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .||+|+.....||||||||++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++..+++++.++|
T Consensus        72 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~~~~~~~~~~~~C  148 (223)
T 3mfj_A           72 VHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCA-SAGTQCLISGWGNTKSSGT--SYPDVLKCLKAPILSDSSC  148 (223)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCC-CTTCEEEEEESSCCCSSSC--CCCSSCEEEEEEBCCHHHH
T ss_pred             ECCCCCCCCCCCCEEEEEeCCCcccCCcEeeeECCCCCC-CCCCEEEEEeeeccCCCCC--cccchheEEEEEEeCHHHh
Confidence            999999988899999999999999999999999998765 6788999999998864321  1267899999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+..     .+.++||||+...++.+.|                              .|||||||++..    +|+|
T Consensus       149 ~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----~l~G  189 (223)
T 3mfj_A          149 KSAYPG-----QITSNMFCAGYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG  189 (223)
T ss_dssp             HHHSTT-----TCCTTEEEESCTTSSCBCC------------------------------TTCTTCEEEETT----EEEE
T ss_pred             hhhhcC-----cCCCCEEEccCCCCCCCcC------------------------------CCCcccceEECC----EEEE
Confidence            987752     4688999998766778899                              999999999953    6999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|||.+|...+.|++||||+.|++||+++|+.
T Consensus       190 I~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~~  222 (223)
T 3mfj_A          190 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIAS  222 (223)
T ss_dssp             EEEECSSSSBTTBCEEEEEGGGGHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCeEEEEHHHhHHHHHHHHhc
Confidence            999999998878999999999999999999864

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=100.00  E-value=1.8e-50  Score=357.52  Aligned_cols=223  Identities=38%  Similarity=0.653  Sum_probs=193.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|..++.++|+||||+++||||||||+.+    .....+.|++|..+... ..+.+.|.+++.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~~-~~~~~~v~~i~~h   75 (224)
T 1pq7_A            1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSG----YAQSGFQIRAGSLSRTS-GGITSSLSSVRVH   75 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTT----SCGGGEEEEESCSBSSS-SSEEECEEEEEEC
T ss_pred             CCCCEECCCCCcCeEEEEEECCCeEEEEEEecCCEEEEcHHccCC----CCCCceEEEeCcceecC-CCEEEEEEEEEEC
Confidence            689999999999999999988889999999999999999999975    34567899999887643 4567899999999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ  275 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~  275 (388)
                      |+|+..  .||||||||++|+.+++.++|||||..... ..+..++++|||.+.....  ..+..|++..+++++.++|+
T Consensus        76 p~y~~~--~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~--~~~~~l~~~~~~~~~~~~C~  151 (224)
T 1pq7_A           76 PSYSGN--NNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGS--STPVNLLKVTVPIVSRATCR  151 (224)
T ss_dssp             TTCBTT--BTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCS--CCCSBCEEEEEEEECHHHHH
T ss_pred             CCCCCC--CCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCC--cccceeeEeEEEEEcHHHhh
Confidence            999876  799999999999999999999999953322 6788999999999876541  12678999999999999999


Q ss_pred             hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEE
Q psy13815        276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL  355 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi  355 (388)
                      ..+..    ..+.+.||||+...+..+.|                              +|||||||++.. +  +|+||
T Consensus       152 ~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~-g--~l~Gi  194 (224)
T 1pq7_A          152 AQYGT----SAITNQMFCAGVSSGGKDSC------------------------------QGDSGGPIVDSS-N--TLIGA  194 (224)
T ss_dssp             HHHCT----TTSCTTEEEECCTTCCCBCC------------------------------TTCTTCEEECTT-C--CEEEE
T ss_pred             HhhcC----CCCCCCeEEeecCCCCCCCC------------------------------cCCCCcceECcC-C--eEEEE
Confidence            88751    24688999998766778899                              999999999863 2  79999


Q ss_pred             EEecCCCCCCCCCeEEEeCCCchhHHhhhh
Q psy13815        356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL  385 (388)
Q Consensus       356 ~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i  385 (388)
                      +|||.+|..++.|++||||+.|++||+++|
T Consensus       195 ~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i  224 (224)
T 1pq7_A          195 VSWGNGCARPNYSGVYASVGALRSFIDTYA  224 (224)
T ss_dssp             EEECSSSSCTTCCEEEEETTTSHHHHHHHC
T ss_pred             EEeCCCCCCCCCCeEEEEHHHHHHHHHhhC
Confidence            999999998889999999999999999875

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=100.00  E-value=1.7e-50  Score=361.94  Aligned_cols=233  Identities=33%  Similarity=0.621  Sum_probs=202.0

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|.  +.++|+||||+++||||||||+.+.  ......+.|++|.........+.+.+.++++|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~--~~~~CgGtLI~~~~VLTAAhC~~~~--~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h   76 (242)
T 3tvj_B            1 IYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTAAHAVYEQ--KHDASALDIRMGTLKRLSPHYTQAWSEAVFIH   76 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEE--SSEEEEEEEETTTEEEECHHHHSTT--TTCSSCCEEEESCSBTTCSCCEEEEEEEEEEC
T ss_pred             CcCCeeCCCCCCCCEEEEe--cCCcEEEEEecCCEEEECHHHCCCC--CCCcceEEEEeccccccCcccceeeEEEEEeC
Confidence            6899999999999999998  5789999999999999999999752  13456778999998877666678899999999


Q ss_pred             CCCCC-CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC---CCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        197 PSHSC-SSFNNDIALLELTRSIQWSDLIRPACLPSGSL---DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       197 p~y~~-~~~~~DIALl~L~~~v~~~~~v~picLp~~~~---~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      |+|+. ....||||||||++|+.|++.++|||||....   ...+..++++|||.+...    ..+..|++..+++++.+
T Consensus        77 p~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~----~~~~~l~~~~~~i~~~~  152 (242)
T 3tvj_B           77 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG----FLARNLMYVDIPIVDHQ  152 (242)
T ss_dssp             TTCCTTSCSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTS----SCCSBCEEEEEEBCCHH
T ss_pred             CCCCCCCCCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCC----CcCccceEEeeeEEcHH
Confidence            99997 66789999999999999999999999998764   267889999999988753    23788999999999999


Q ss_pred             hhhhHhhcCC-CccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEe--cCCc
Q psy13815        273 VCQAWYQSEG-KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL--GAES  349 (388)
Q Consensus       273 ~C~~~~~~~~-~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~--~~~~  349 (388)
                      +|+..+.... ....+.++||||+...++.+.|                              .|||||||++.  .+++
T Consensus       153 ~C~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPL~~~~~~~~~  202 (242)
T 3tvj_B          153 KCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC------------------------------RGDSGGALVFLDSETER  202 (242)
T ss_dssp             HHHHHHHSTTSCTTCCCTTEEEESCTTCCSBCC------------------------------TTCTTCEEEEEETTTTE
T ss_pred             HHHHhhccCCcccccccCCeEEECCCCCCCccc------------------------------cCCCCCeEEEEeCCCCc
Confidence            9999886321 1224788999999877788999                              99999999996  4678


Q ss_pred             cEEEEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        350 TQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       350 ~~l~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|+||+||| .+|...+.|++||||+.|++||+++|+.
T Consensus       203 ~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~  241 (242)
T 3tvj_B          203 WFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIISD  241 (242)
T ss_dssp             EEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred             EEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence            9999999999 7999888999999999999999999863

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=100.00  E-value=3.3e-50  Score=358.18  Aligned_cols=224  Identities=32%  Similarity=0.608  Sum_probs=193.4

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|..++.++|+||||+++||||||||+.+       ..+.|++|..+...  ...+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~-------~~~~v~~G~~~~~~~~~~~~~~~v~~~~   73 (234)
T 1orf_A            1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN-------KRSQVILGAHSITREEPTKQIMLVKKEF   73 (234)
T ss_dssp             CBSCEECCTTSSTTEEEEECSSSCEEEEEEEETTEEEECTTCCCC-------TTCEEEESCSBSSSCCTTCEEECEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEccCCceEEEEEEeeCCEEEEchhcCCC-------CCceEEEeccccCcCCCceEEEEEEEEE
Confidence            689999999999999999988889999999999999999999864       34578999887653  345788999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      .||+|+.....||||||+|++|+.|+++++|||||..... ..+..++++|||.+......   +..|++..+++++.++
T Consensus        74 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~~~~  150 (234)
T 1orf_A           74 PYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASW---SDTLREVEITIIDRKV  150 (234)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCC---CSBCEEEEEEEECHHH
T ss_pred             cCCCCCCCCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCc---cccceEeEEEeeCHHH
Confidence            9999999889999999999999999999999999987654 57889999999998765433   7789999999999999


Q ss_pred             hhh--HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        274 CQA--WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       274 C~~--~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      |+.  .+.   ....+.++||||+...+..+.|                              +|||||||+++.    +
T Consensus       151 C~~~~~~~---~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----~  193 (234)
T 1orf_A          151 CNDRNHYN---FNPVIGMNMVCAGSLRGGRDSC------------------------------NGDSGSPLLCEG----V  193 (234)
T ss_dssp             HTSTTTTT---TTTCCCTTEEEEECSSCCCBCC------------------------------TTCTTCEEEETT----E
T ss_pred             cCCccccc---cCCccCCCEEEecCCCCCCcCC------------------------------CCCCCCeEEECC----E
Confidence            984  332   1223445999999766678899                              999999999953    7


Q ss_pred             EEEEEEecC--CCCCCCCCeEEEeCC-CchhHHhhhhcc
Q psy13815        352 VIGLVSTGI--GCARPRLPGLYTRLT-RYIGWISDTLDI  387 (388)
Q Consensus       352 l~Gi~s~g~--~c~~~~~p~v~t~V~-~~~~WI~~~i~~  387 (388)
                      |+||+|||.  +|+.++.|++||||+ .|++||+++++.
T Consensus       194 l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~~~  232 (234)
T 1orf_A          194 FRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIKG  232 (234)
T ss_dssp             EEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHCC
T ss_pred             EEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHHHh
Confidence            999999998  899888999999999 999999999864

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=100.00  E-value=1.5e-50  Score=363.56  Aligned_cols=233  Identities=29%  Similarity=0.487  Sum_probs=199.3

Q ss_pred             EecceecCCCCcceEEEEccCC-----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--Cceeeec
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG-----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVP  189 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~-----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~  189 (388)
                      |+||.++.+++|||+|+|+...     .++|+||||+++||||||||+.+.   .....+.|++|..+...  ...+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~---~~~~~~~v~~g~~~~~~~~~~~~~~~   77 (247)
T 3mhw_U            1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDY---PKKEDYIVYLGRSRLNSNTQGEMKFE   77 (247)
T ss_dssp             CBSSEECCGGGSTTEEEEEEECTTSCEEEEEEEEEEETTEEEECGGGTTTS---CCGGGEEEEESCCBSSSCCTTCEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEecCCCccceEEEEEEEeCCEEEEcHHhCcCC---CCCccEEEEeccccccCCCCCCEEEE
Confidence            6899999999999999997532     578999999999999999999762   23567889999887753  3456789


Q ss_pred             eEEEEECCCCCCCC--CCCcEEEEEeCCC----CCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccce
Q psy13815        190 VLRIMFHPSHSCSS--FNNDIALLELTRS----IQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQ  262 (388)
Q Consensus       190 v~~i~~hp~y~~~~--~~~DIALl~L~~~----v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~  262 (388)
                      |.++++||+|+...  ..||||||+|++|    +.+++.++|||||..... ..+..++++|||.+.....  ..+..|+
T Consensus        78 v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~--~~~~~l~  155 (247)
T 3mhw_U           78 VENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDY--LYPEQLK  155 (247)
T ss_dssp             EEEEEECTTCEEC-CCEESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCS--SCCSBCE
T ss_pred             EEEEEECCCCCCCcCCCCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCc--ccchhhe
Confidence            99999999998766  5689999999999    788999999999986543 5688999999998876542  1377899


Q ss_pred             EEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCce
Q psy13815        263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL  342 (388)
Q Consensus       263 ~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL  342 (388)
                      +..+++++.++|+..+.   ....+.++||||+...+..+.|                              +|||||||
T Consensus       156 ~~~~~~~~~~~C~~~~~---~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPl  202 (247)
T 3mhw_U          156 MTVVKLISHRECQQPHY---YGSEVTTKMLCAADPQWKTDSC------------------------------QGDSGGPL  202 (247)
T ss_dssp             EEEEEEECHHHHTSTTT---TGGGCCTTEEEEECTTSCCBCC------------------------------TTCTTCEE
T ss_pred             eeEEEEEChHHhcCccc---cCCcCCCCeEecCCCCCCCccC------------------------------CCCCCCeE
Confidence            99999999999987532   2336789999999877778999                              99999999


Q ss_pred             EEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        343 MLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       343 ~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ++..+++|+|+||+|||.+|..++.|++||||+.|++||+++++.
T Consensus       203 ~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~e  247 (247)
T 3mhw_U          203 VCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTKE  247 (247)
T ss_dssp             EEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHHHHTTC
T ss_pred             EEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHhcC
Confidence            999999999999999999999888999999999999999999863

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=100.00  E-value=5.3e-50  Score=355.22  Aligned_cols=221  Identities=32%  Similarity=0.561  Sum_probs=190.5

Q ss_pred             EecceecCCCCcceEEEEcc--CC-ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKR--HG-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~--~~-~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|+|..  .+ .++|+||||+++||||||||+.+        .+.|++|..+...  ...+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~   72 (227)
T 1iau_A            1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCWGS--------SINVTLGAHNIKEQEPTQQFIPVK   72 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECSSCEEEEEEEEEETTEEEECGGGCCS--------EEEEEESCSBTTSCCTTCEEEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEEECCCCceEEEEEEEcCCEEEECHHhCCC--------ceEEEEccccccCCCCccEEEEEE
Confidence            68999999999999999975  33 48999999999999999999953        4789999887653  346788999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.||+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..+++++
T Consensus        73 ~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~---~~~L~~~~~~i~~  149 (227)
T 1iau_A           73 RPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKH---SHTLQEVKMTVQE  149 (227)
T ss_dssp             EEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCC---CSBCEEEEEEBCC
T ss_pred             EEECCCCCCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCc---CceeeEeeeeeec
Confidence            9999999999889999999999999999999999999987653 57889999999998754433   7789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|+..+..    ......|||++...+..+.|                              +|||||||+++.    
T Consensus       150 ~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----  191 (227)
T 1iau_A          150 DRKCESDLRH----YYDSTIELCVGDPEIKKTSF------------------------------KGDSGGPLVCNK----  191 (227)
T ss_dssp             HHHHHHHTTT----TCCTTTEEEESCTTSCCBCC------------------------------TTCTTSEEEETT----
T ss_pred             hHHhhhHhcc----ccCCCcEEEeECCCCCCeee------------------------------ecCCCchheEee----
Confidence            9999987752    13345699999876678899                              999999999953    


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      +|+||+|||  |...+.|++||||+.|++||+++|+.+
T Consensus       192 ~l~Gi~S~g--c~~~~~p~vyt~v~~~~~WI~~~~~~~  227 (227)
T 1iau_A          192 VAQGIVSYG--RNNGMPPRACTKVSSFVHWIKKTMKRY  227 (227)
T ss_dssp             EEEEEEEEE--CTTSCSCEEEEEGGGGHHHHHHHHHC-
T ss_pred             EEEEEEeEe--cCCCCCCeEEEEHHHHHHHHHHHHhhC
Confidence            799999998  876678999999999999999999753

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=100.00  E-value=3.8e-50  Score=356.04  Aligned_cols=220  Identities=33%  Similarity=0.649  Sum_probs=191.8

Q ss_pred             EecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC---CCceeeeceEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS---RPSISTVPVLR  192 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~v~~  192 (388)
                      |+||.++.+++|||+|+|+.. +.++|+||||+++||||||||+.+        .+.|++|.++..   ....+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~~v~~   72 (227)
T 2psx_A            1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRKK--------VFRVRLGHYSLSPVYESGQQMFQGVK   72 (227)
T ss_dssp             CBTCEECCTTSCTTEEEEEETTTEEEEEEEEEETTEEEECGGGCCS--------SCEEEESCCBSSCCCCTTCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEecCCCceEEEEEEcCCEEEEhHHcCCC--------CcEEEEeeeecccCCCCCcEEEEEEE
Confidence            689999999999999999865 578999999999999999999853        457899988765   33456789999


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      ++.||+|+.....||||||||++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++..+++++.+
T Consensus        73 ~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~~~~~~i~~~~  149 (227)
T 2psx_A           73 SIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCP-SAGTKCLVSGWGTTKSPQV--HFPKVLQCLNISVLSQK  149 (227)
T ss_dssp             EEECTTCCSSSCTTCCEEEEESSCCCCCSSSCCCCBCSSCC-CTTCEEEEEESSCSSSSSC--CCCSBCEEEEEEBCCHH
T ss_pred             EEeCCCCCCCCCCCCEEEEEeCCCCCCCCceeeeECCCCCC-CCCCEEEEEeCcccCCCCC--CCCchheEEEEEecCHh
Confidence            99999999988899999999999999999999999997554 6788999999999876531  12678999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      +|+..+..     .+.+.||||+. ..+.+.|                              .|||||||++..    +|
T Consensus       150 ~C~~~~~~-----~~~~~~~Ca~~-~~~~~~C------------------------------~GDSGgPL~~~~----~l  189 (227)
T 2psx_A          150 RCEDAYPR-----QIDDTMFCAGD-KAGRDSC------------------------------QGDSGGPVVCNG----SL  189 (227)
T ss_dssp             HHHHHSTT-----TCCTTEEEECC-STTCBCC------------------------------TTCTTCEEEETT----EE
T ss_pred             HhhhhcCC-----CCCCCEEcccC-CCCCccC------------------------------CCCCCcceeeCC----EE
Confidence            99987752     46889999985 4567889                              999999999964    79


Q ss_pred             EEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        353 IGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       353 ~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +||+||| .+|..++.|++||||+.|++||+++|+.
T Consensus       190 ~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~  225 (227)
T 2psx_A          190 QGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQA  225 (227)
T ss_dssp             EEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHHH
T ss_pred             EEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHhc
Confidence            9999999 6898888999999999999999999864

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=100.00  E-value=3.3e-50  Score=358.93  Aligned_cols=221  Identities=33%  Similarity=0.672  Sum_probs=192.4

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+.        ..+.|++|..+..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~~~   72 (237)
T 1ao5_A            1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYV--------DQYEVWLGKNKLFQEEPSAQHRLVSKSF   72 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECTTCCC--------SSCEEEESCCBSSSCCSSCEECCEEEEE
T ss_pred             CCCCeECCCCCcCCEEEEeeCCCeEEEEEEeeCCEEEECHHHCC--------CCCEEEecccccccCCCCcEEEEEEEEE
Confidence            68999999999999999998888999999999999999999994        2467899988764  3345678999999


Q ss_pred             ECCCCCCCCC-----------CCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceE
Q psy13815        195 FHPSHSCSSF-----------NNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK  263 (388)
Q Consensus       195 ~hp~y~~~~~-----------~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~  263 (388)
                      .||+|+....           .||||||+|++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++
T Consensus        73 ~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~~  149 (237)
T 1ao5_A           73 PHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEP-KPGSKCLASGWGSITPTRW--QKPDDLQC  149 (237)
T ss_dssp             ECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCC-CTTCEEEEEESCCSSCC-C--CCCSBCEE
T ss_pred             cCCCcCcccccccccccccCCCCCEEEEEeCCccccCCceeCCCcCCCCC-CCCCEEEEEECCccCCCCC--CCCCcccE
Confidence            9999987554           89999999999999999999999998765 6788999999998876521  23778999


Q ss_pred             EEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceE
Q psy13815        264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM  343 (388)
Q Consensus       264 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~  343 (388)
                      ..+++++.++|+..+.     ..+.+.||||+...++.+.|                              .|||||||+
T Consensus       150 ~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~  194 (237)
T 1ao5_A          150 VFITLLPNENCAKVYL-----QKVTDVMLCAGEMGGGKDTC------------------------------RDDSGGPLI  194 (237)
T ss_dssp             EEEEEECHHHHHHHCS-----SCCCTTEEEEECTTCSCBCC------------------------------TTCTTCEEE
T ss_pred             EEEEecChhHhhhhhc-----ccCCCCEEEEccCCCCCCCC------------------------------CCCCcceEE
Confidence            9999999999998774     24788999998545667889                              999999999


Q ss_pred             EecCCccEEEEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        344 LLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       344 ~~~~~~~~l~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ++.    +|+||+||| .+|..++.|++||||+.|++||+++|+.
T Consensus       195 ~~~----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~  235 (237)
T 1ao5_A          195 CDG----ILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMMK  235 (237)
T ss_dssp             ETT----EEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHHH
T ss_pred             ECC----EEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHhh
Confidence            943    799999999 6899888999999999999999999864

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=100.00  E-value=5.6e-50  Score=354.22  Aligned_cols=221  Identities=34%  Similarity=0.722  Sum_probs=195.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|. .+.++|+||||+++||||||||+.+        .+.|++|..+..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~-~~~~~C~GtLI~~~~VLTAAhC~~~--------~~~v~~g~~~~~~~~~~~~~~~v~~~~   71 (223)
T 4i8h_A            1 IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKS--------GIQVRLGEDNINVVEGNEQFISASKSI   71 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-SSSEEEEEEECSSSEEEECGGGCCS--------SCEEEESCSSTTSCCSCCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEec-CCCcEEEEEEEcCCEEEecHHhCCC--------CcEEEEccccccccCCCcEEEEEeEEE
Confidence            6899999999999999998 4568899999999999999999853        467889987765  4455678999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .||+|+.....||||||+|++|+.|++.++|||||.... ..+..++++|||.+......  .+..|++..+++++.++|
T Consensus        72 ~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~~~~~--~~~~l~~~~~~~~~~~~C  148 (223)
T 4i8h_A           72 VHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCA-SAGTQCLISGWGNTKSSGTS--YPDVLKCLKAPILSDSSC  148 (223)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCC-CTTCEEEEEESSCCCSSSCC--CCSSCEEEEEEBCCHHHH
T ss_pred             ECcCCCCCCCcCCEEEEEECCcCcCCCceeceECCCCCC-CCCCEEEEEecccccCCCCC--ccccceEEEeeecCHHHH
Confidence            999999999999999999999999999999999998775 78899999999988764321  267899999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+..     .+.++||||+...+..+.|                              .|||||||++..    +|+|
T Consensus       149 ~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~----~l~G  189 (223)
T 4i8h_A          149 KSAYPG-----QITSNMFCAGYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG  189 (223)
T ss_dssp             HHHSTT-----TCCTTEEEESCTTSSCBCC------------------------------TTCTTCEEEETT----EEEE
T ss_pred             HHhhCC-----CCCCCeEeccCCCCCCccC------------------------------CCCCCCcEEECC----EEEE
Confidence            988752     5788999998777788899                              999999999965    6999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      |+|||.+|...+.|++||||+.|++||+++|+.+
T Consensus       190 i~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~~~  223 (223)
T 4i8h_A          190 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN  223 (223)
T ss_dssp             EEEECSSSSCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred             EEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHhcC
Confidence            9999999998889999999999999999999764

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.6e-50  Score=356.85  Aligned_cols=221  Identities=32%  Similarity=0.615  Sum_probs=193.2

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+.+        .+.|++|.++..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~~~~   72 (238)
T 1spj_A            1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISD--------NYQLWLGRHNLFDDENTAQFVHVSESF   72 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS--------SEEEEESCSBTTSCCTTCEEECEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEeCCCeeEEEEEecCCEEEEcHHhCCC--------CceEEEEeccccCCCCCceEEEEEEEE
Confidence            689999999999999999988889999999999999999999953        467899988765  3345778999999


Q ss_pred             ECCCCC-----------CCCCCCcEEEEEeCCCCC-CCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccce
Q psy13815        195 FHPSHS-----------CSSFNNDIALLELTRSIQ-WSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQ  262 (388)
Q Consensus       195 ~hp~y~-----------~~~~~~DIALl~L~~~v~-~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~  262 (388)
                      .||+|+           .....||||||+|++|+. +++.++|||||.... ..+..++++|||.+.....  ..+..|+
T Consensus        73 ~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~  149 (238)
T 1spj_A           73 PHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEP-EVGSTCLASGWGSIEPENF--SFPDDLQ  149 (238)
T ss_dssp             ECTTSCGGGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCSSCC-CTTCEEEEEESSCSSSSSC--CCCSBCE
T ss_pred             cCCCccccccccccccccccCCCCeEEEEECccccccCCceeeccCCCCCC-CCCCEEEEEecCCCCCCCC--CCcCccc
Confidence            999998           456789999999999998 999999999997665 6788999999999876432  1267899


Q ss_pred             EEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCce
Q psy13815        263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL  342 (388)
Q Consensus       263 ~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL  342 (388)
                      ++.+++++.++|+..+..     .+.+.||||+...++.+.|                              .|||||||
T Consensus       150 ~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL  194 (238)
T 1spj_A          150 CVDLKILPNDECKKAHVQ-----KVTDFMLCVGHLEGGKDTC------------------------------VGDSGGPL  194 (238)
T ss_dssp             EEEEEEECHHHHHHHCSS-----CCCTTEEEEECTTCSSBCC------------------------------TTCTTCEE
T ss_pred             EEEEeecCHHHhhhhccC-----CCCCCeEEeeCCCCCCCCC------------------------------CCCCCCcE
Confidence            999999999999987642     4688999999766778899                              99999999


Q ss_pred             EEecCCccEEEEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        343 MLLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       343 ~~~~~~~~~l~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ++..    +|+||+||| .+|+.++.|++||||+.|++||+++|+.
T Consensus       195 ~~~~----~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~  236 (238)
T 1spj_A          195 MCDG----VLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIAE  236 (238)
T ss_dssp             EETT----EEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred             EEcC----EEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHhhc
Confidence            9953    899999999 6899888999999999999999999864

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=100.00  E-value=4.7e-50  Score=357.72  Aligned_cols=225  Identities=31%  Similarity=0.581  Sum_probs=193.7

Q ss_pred             EecceecCCCCcceEEEEccC--Cc--eeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--Cceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--GG--HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~~--~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|+..  +.  ++|+||||+++||||||||+..      ...+.|++|..+...  ...+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~------~~~~~V~~G~~~~~~~~~~~~~~~v   74 (236)
T 1elt_A            1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS------ARTWRVVLGEHNLNTNEGKEQIMTV   74 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSS------CCCEEEEESCSBTTSCCSCCEEECE
T ss_pred             CCCCEECCCCCCCCEEEEEEecCCceeeEEEEEEEeCCEEEECHHhhCC------cCceEEEEccccCCCCCCCcEEEEE
Confidence            689999999999999999863  32  7899999999999999999965      357889999987753  24577899


Q ss_pred             EEEEECCCCCCCCC--CCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEE
Q psy13815        191 LRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALS  267 (388)
Q Consensus       191 ~~i~~hp~y~~~~~--~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~  267 (388)
                      .+++.||+|+....  .||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..++
T Consensus        75 ~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~  151 (236)
T 1elt_A           75 NSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPL---SDSLKQAWLP  151 (236)
T ss_dssp             EEEEECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCC---CSBCEEEECC
T ss_pred             EEEEECCCCCCCCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCc---ChhheEeEee
Confidence            99999999998776  899999999999999999999999987643 56888999999998765433   7789999999


Q ss_pred             eechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecC
Q psy13815        268 VVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA  347 (388)
Q Consensus       268 i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~  347 (388)
                      +++.++|+..+.   ....+.+.||||+..  +.+.|                              .|||||||++..+
T Consensus       152 ~~~~~~C~~~~~---~~~~~~~~~~Ca~~~--~~~~C------------------------------~GDSGgPL~~~~~  196 (236)
T 1elt_A          152 SVDHATCSSSGW---WGSTVKTTMVCAGGG--ANSGC------------------------------NGDSGGPLNCQVN  196 (236)
T ss_dssp             EECHHHHTSTTT---TGGGSCTTEEEECCS--SCBCC------------------------------TTCTTCEEEEEET
T ss_pred             ecCHHHhccccc---cCCcCCcceEEecCC--CCccC------------------------------CCCCCCeeEEEEC
Confidence            999999987532   122578899999842  37889                              9999999999888


Q ss_pred             CccEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhh
Q psy13815        348 ESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTL  385 (388)
Q Consensus       348 ~~~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i  385 (388)
                      ++|+|+||+||+.  +|...+.|++||||+.|++||+++|
T Consensus       197 g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i  236 (236)
T 1elt_A          197 GSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM  236 (236)
T ss_dssp             TEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHHC
T ss_pred             CEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHhhC
Confidence            9999999999985  8988889999999999999999875

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=100.00  E-value=2.1e-50  Score=385.46  Aligned_cols=236  Identities=33%  Similarity=0.656  Sum_probs=201.6

Q ss_pred             CCCCCccCCCCCeEecceecCCCCcceEEEEccC--C--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEecccc
Q psy13815        104 PCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRH--G--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHD  179 (388)
Q Consensus       104 ~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~~--~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~  179 (388)
                      .||. .   ...||+||.++..++|||||.|...  +  .++|+||||+++||||||||+..    .....+.|++|.++
T Consensus       110 ~CG~-~---~~~rIvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~----~~~~~~~V~lG~~~  181 (408)
T 2xxl_A          110 DCGN-F---LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHG----LQNDLYEIRLGEHR  181 (408)
T ss_dssp             CCSC-C---CCCCCCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTT----CTTTEEEEEESCSB
T ss_pred             ccCC-C---CCCceECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCC----CCCceEEEEeeeeE
Confidence            7993 2   4679999999999999999999752  2  57899999999999999999976    22467899999887


Q ss_pred             CCCC--------------ceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC----CCCCCeEE
Q psy13815        180 LSRP--------------SISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL----DYSEQSVT  241 (388)
Q Consensus       180 ~~~~--------------~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~----~~~~~~~~  241 (388)
                      ....              ..+.+.|+++++||+|+.....||||||||++|+.|+++++|||||....    ...+..++
T Consensus       182 ~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~  261 (408)
T 2xxl_A          182 ISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYF  261 (408)
T ss_dssp             TTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEE
T ss_pred             CCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEE
Confidence            7532              34678899999999999988899999999999999999999999997642    25678999


Q ss_pred             EEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCccccccccc
Q psy13815        242 VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVY  321 (388)
Q Consensus       242 ~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~  321 (388)
                      ++|||.+....    .+..|+++.+++++.++|+..+..     .+..+||||+... +.+.|                 
T Consensus       262 v~GWG~t~~~~----~s~~L~~~~v~iv~~~~C~~~~~~-----~~~~~~iCAg~~~-g~d~C-----------------  314 (408)
T 2xxl_A          262 VTGWGTTENGS----SSDVLLQANVPLQPRSACSQAYRR-----AVPLSQLCVGGGD-LQDSC-----------------  314 (408)
T ss_dssp             EEECCCBTTBC----SCSBCEEEEEEEECHHHHHHHHTS-----CCCTTEEEECCSC-SSSGG-----------------
T ss_pred             EEEeCcCCCCC----CCchheEeeeeecCHHHHHHHhcc-----cCCCceEeecCCC-CCccC-----------------
Confidence            99999987643    278899999999999999998863     1455999998754 67899                 


Q ss_pred             CCCCCCCCCCCCCCCcCCCce------EEecCCccEEEEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        322 PSHRSGVHWDPPLQADSGGPL------MLLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       322 ~~~~~~~~~~~~~~gdsGgPL------~~~~~~~~~l~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                                   +|||||||      ++..+++|+|+||+||| .+|+..+.|+|||||+.|++||+++++.
T Consensus       315 -------------~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~~  374 (408)
T 2xxl_A          315 -------------KGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTMAS  374 (408)
T ss_dssp             -------------GSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHHHHHH
T ss_pred             -------------CCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence                         99999999      55556789999999999 6999888999999999999999998863

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=100.00  E-value=7.6e-50  Score=356.18  Aligned_cols=228  Identities=25%  Similarity=0.410  Sum_probs=201.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|...+.++|+||||+++||||||||+..    .....+.|++|..+..... +.+.|.+++.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~~~~-~~~~v~~i~~h   75 (235)
T 3h7t_A            1 IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDG----TKPSDISIHYGSSYRTTKG-TSVMAKKIYIV   75 (235)
T ss_dssp             CBTCEECCTTTSTTEEEEEETTSCCEEEEESSSSEEEECHHHHTT----CCGGGEEEEESCSBSSSSS-EEEEEEEEEEC
T ss_pred             CCCCEECCCCCCCcEEEEecCCCceEeEEEeeCCEEEECHHHCCC----CCCCeeEEEcCccccccCC-ceeeeeeEEee
Confidence            689999999999999999988889999999999999999999975    4567889999998876443 67899999999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCC-CeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSD-LIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~-~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                       +|+.....||||||+|++|+.|++ .++|||||..... ..+..++++|||.+.....  ..+..|++..+++++.++|
T Consensus        76 -~y~~~~~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~--~~~~~l~~~~~~~~~~~~C  152 (235)
T 3h7t_A           76 -RYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSL--EYSGDLMEANFTVVDRKSC  152 (235)
T ss_dssp             -SCBTTTTBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCC--CCCSBCEEEEEEEECHHHH
T ss_pred             -ecCCCCCCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCC--chhHHHhhCCCceeCHHHH
Confidence             999988999999999999999998 9999999987743 7788999999999876541  1378899999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+........+.++||||+...+..+.|                              +|||||||++..    .|+|
T Consensus       153 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~----~l~G  198 (235)
T 3h7t_A          153 EEQYKQIEADKYIYDGVFCAGGEYDETYIG------------------------------YGDAGDPAVQNG----TLVG  198 (235)
T ss_dssp             HHHHHTTTCGGGCSTTEEEECBTTTTBBCC------------------------------TTCTTCEEEETT----EEEE
T ss_pred             HHHhhhcccCccccCCeEecCCCCCCCccc------------------------------cCCCCCceeeCC----eEEE
Confidence            999875433345889999999877788999                              999999999944    4999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|||.+|.. +.|++||||+.|++||+++|+.
T Consensus       199 i~S~g~~C~~-~~p~vyt~v~~~~~WI~~~i~~  230 (235)
T 3h7t_A          199 VASYISSMPS-EFPSVFLRVGYYVLDIKDIISG  230 (235)
T ss_dssp             EECCCTTCCT-TSCEEEEEGGGGHHHHHHHHTT
T ss_pred             EEEecCCCCC-CCCceEEEHHHHHHHHHHHHhC
Confidence            9999999987 8899999999999999999875

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=100.00  E-value=1.5e-49  Score=355.36  Aligned_cols=223  Identities=29%  Similarity=0.627  Sum_probs=192.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC----CceeeeceEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR----PSISTVPVLR  192 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~----~~~~~~~v~~  192 (388)
                      |+||.++.+ +|||+|+|+..+.++|+||||+++||||||||+..    .....+.|++|..+...    ...+.+.|.+
T Consensus         1 IvgG~~a~~-~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~   75 (240)
T 1si5_H            1 VVNGIPTRT-NIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPS----RDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQ   75 (240)
T ss_dssp             CBSCEECSS-CCTTEEEEEESSSEEEEEEEEETTEEEEEGGGCSS----SCGGGEEEEESCSBSSCSTTTTTCEEEEEEE
T ss_pred             CCCCeeCCC-CCCeEEEEEeCCCeEEEEEEeeCCEEEEhHHhcCC----CCCccEEEEEeeeecCCCCCCCcceEEEEEE
Confidence            689999999 99999999988889999999999999999999976    23567899999887753    3456789999


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeech
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN  271 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~  271 (388)
                      ++.||.      .||||||+|++|+.|++.++|||||..... ..+..++++|||.+....    .+..|++..+++++.
T Consensus        76 ~~~~p~------~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~----~~~~L~~~~~~~~~~  145 (240)
T 1si5_H           76 LVYGPE------GSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLIN----YDGLLRVAHLYIMGN  145 (240)
T ss_dssp             EEECSS------TTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSS----CCCBCEEEEEEEECG
T ss_pred             EEcCCC------CCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCC----CCCeeEEEEEeecCH
Confidence            999986      689999999999999999999999986543 578899999999887543    267899999999999


Q ss_pred             hhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       272 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      ++|...+..   ...+.+.||||+...++.+.|                              .|||||||++..+++|+
T Consensus       146 ~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~~~~~~  192 (240)
T 1si5_H          146 EKCSQHHRG---KVTLNESEICAGAEKIGSGPC------------------------------EGDYGGPLVCEQHKMRM  192 (240)
T ss_dssp             GGTCC----------CCTTEEEEECSSSCCBCC------------------------------TTCTTCEEEEECSSSEE
T ss_pred             HHhhhhhcC---CccCCCCEEeecCCCCCCEec------------------------------cCCCCCcEEEEECCcEE
Confidence            999887641   223788999999876678899                              99999999999999999


Q ss_pred             EEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       352 l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+||+|||.+|..++.|++||||+.|++||+++|+.
T Consensus       193 l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~  228 (240)
T 1si5_H          193 VLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILT  228 (240)
T ss_dssp             EEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSS
T ss_pred             EEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence            999999999999888999999999999999999864

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=100.00  E-value=6.9e-50  Score=354.79  Aligned_cols=224  Identities=33%  Similarity=0.653  Sum_probs=193.0

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|...+.++|+||||+++||||||||+.+    .....+.|++|..+...  ...+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~   76 (228)
T 2xw9_A            1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLED----AADGKVQVLLGAHSLSQPEPSKRLYDVLRAV   76 (228)
T ss_dssp             CBCC-CCCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGGSS----CTTCCEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred             CCCCeECCCCCCCcEEEEEECCCeEEEEEEEeCCEEEEcHHhCCC----CCCCceEEEEcccccCCCCCcceEEEEEEEE
Confidence            689999999999999999988889999999999999999999975    23457899999887753  335678999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      .||+|+.....||||||+|++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..+++++.++
T Consensus        77 ~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~~~~~  153 (228)
T 2xw9_A           77 PHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRR---PDSLQHVLLPVLDRAT  153 (228)
T ss_dssp             ECTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCC---CSBCEEEECCEECHHH
T ss_pred             eCCCCCCCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCC---CchheEEEEEEcChhH
Confidence            9999999889999999999999999999999999986443 57888999999998765433   7789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |+..+..   ...+.+.|||++.  ...+.|                              .|||||||++..    +|+
T Consensus       154 C~~~~~~---~~~~~~~~~Ca~~--~~~~~C------------------------------~GDsGgPL~~~~----~l~  194 (228)
T 2xw9_A          154 CNRRTHH---DGAITERLMCAES--NRRDSC------------------------------KGDAGGPLVCGG----VLE  194 (228)
T ss_dssp             HTSTTTT---TTCCCTTEEEECC--SSCBCC------------------------------TTCTTCEEEETT----EEE
T ss_pred             hcCcccc---CCcccCCEEecCC--CCCccC------------------------------CCCCcccEEECC----EEE
Confidence            9876642   1257889999975  467889                              999999999953    799


Q ss_pred             EEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        354 GLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       354 Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ||+|++. .|..++.|++||||+.|++||+++|+
T Consensus       195 Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~  228 (228)
T 2xw9_A          195 GVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVLA  228 (228)
T ss_dssp             EEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHHC
T ss_pred             EEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHhC
Confidence            9999998 89888899999999999999999874

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=100.00  E-value=9.5e-50  Score=355.96  Aligned_cols=221  Identities=34%  Similarity=0.608  Sum_probs=192.0

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|...+.++|+||||+++||||||||+.+        ...|++|..+..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~~~~   72 (237)
T 2zch_P            1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRN--------KSVILLGRHSLFHPEDTGQVFQVSHSF   72 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEESSSSEEEEEEEEETTEEEECGGGCCS--------SCEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEcHHhcCC--------CceEEEecccccCCCCCcEEEEEEEEe
Confidence            689999999999999999988889999999999999999999965        135888887664  3345788999999


Q ss_pred             ECCCCCCCCC-----------CCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceE
Q psy13815        195 FHPSHSCSSF-----------NNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK  263 (388)
Q Consensus       195 ~hp~y~~~~~-----------~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~  263 (388)
                      .||+|+....           .||||||+|++|+.|++.++|||||.... ..+..++++|||.+......  .+..|++
T Consensus        73 ~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~~~~-~~~~~~~v~GwG~~~~~~~~--~~~~L~~  149 (237)
T 2zch_P           73 PHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEP-ALGTTCYASGWGSIEPEEFL--TPKKLQC  149 (237)
T ss_dssp             ECTTSCGGGGTSSSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCSSCC-CTTCEEEEEESCCSSSSSCC--CCSBCEE
T ss_pred             cCCCcchhhhcccccccCCCCCcceEEEEeCCCCccCCcEeeeECCCCCC-CCCCEEEEEeCCccCCCCCc--CCcccEE
Confidence            9999987544           78999999999999999999999998765 67889999999998764321  2678999


Q ss_pred             EEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceE
Q psy13815        264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM  343 (388)
Q Consensus       264 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~  343 (388)
                      +.+++++.++|+..+.     ..+.+.||||+...++.+.|                              +|||||||+
T Consensus       150 ~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~  194 (237)
T 2zch_P          150 VDLHVISNDVCAQVHP-----QKVTKFMLCAGRWTGGKSTC------------------------------SGDSGGPLV  194 (237)
T ss_dssp             EEEEEECHHHHHHHCS-----SBCCTTEEEEECTTCSCBCC------------------------------TTCTTCEEE
T ss_pred             eEEEEeCHHHhccccc-----CCCCceEEeecCCCCCCccc------------------------------CCCccCeEE
Confidence            9999999999998764     24688999999876778899                              999999999


Q ss_pred             EecCCccEEEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        344 LLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       344 ~~~~~~~~l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +..    +|+||+|||. .|..++.|++||||+.|++||+++|+.
T Consensus       195 ~~~----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~  235 (237)
T 2zch_P          195 CNG----VLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIVA  235 (237)
T ss_dssp             SSS----SEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred             ECC----EEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence            964    6999999998 798888999999999999999999864

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=100.00  E-value=2.3e-50  Score=376.08  Aligned_cols=247  Identities=32%  Similarity=0.584  Sum_probs=198.4

Q ss_pred             CCCCCCCcc-CCCCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCC-CCccceEEEEecccc
Q psy13815        102 GVPCGRSLA-SRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVTLKEHD  179 (388)
Q Consensus       102 ~~~cg~~~~-~~~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~-~~~~~~~~v~~g~~~  179 (388)
                      .+.||.... .....||+||.++.+++|||+|.|...  +.|+||||+++||||||||+..... ......+.|++|..+
T Consensus        74 ~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~--~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~  151 (329)
T 1md8_A           74 LPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTN  151 (329)
T ss_dssp             EECCSCCSSCCCCC--CBSCCBCCTTSCTTEEEEESS--SEEEEEEETTTEEEECGGGTSCTTC-----CCCCEEESCSB
T ss_pred             CCCCCCCCCcccccccccCCEECCCCCCCCeEeeccC--CCcceEEecCCEEEecCCEEEeCCcccCCCceEEEEecccc
Confidence            356887542 124579999999999999999999753  4799999999999999999974211 123455678999776


Q ss_pred             CCCC-ceeeeceEEEEECCCCCCC---CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCC
Q psy13815        180 LSRP-SISTVPVLRIMFHPSHSCS---SFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQ  254 (388)
Q Consensus       180 ~~~~-~~~~~~v~~i~~hp~y~~~---~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~  254 (388)
                      .... ..+.+.|+++++||+|+..   ...||||||||++|+.|+++++|||||..... ..+..++++|||.+...   
T Consensus       152 ~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~---  228 (329)
T 1md8_A          152 VEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK---  228 (329)
T ss_dssp             HHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSS---
T ss_pred             ccccccccceeeEEEEECCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCC---
Confidence            4321 2245789999999999864   67899999999999999999999999976543 46788999999988653   


Q ss_pred             CCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCC
Q psy13815        255 GRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPL  334 (388)
Q Consensus       255 ~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (388)
                        .+..|+++.+++++.++|+..+........++++||||+...+..+.|                              
T Consensus       229 --~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C------------------------------  276 (329)
T 1md8_A          229 --IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC------------------------------  276 (329)
T ss_dssp             --BCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCSCBCC------------------------------
T ss_pred             --CCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecCCCCCcCC------------------------------
Confidence              267899999999999999988764322235788999999776678999                              


Q ss_pred             CCcCCCceEEe--cCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        335 QADSGGPLMLL--GAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       335 ~gdsGgPL~~~--~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|||||||++.  .+++|+|+||+|||.+|+.  .|+|||||+.|++||+++|+.
T Consensus       277 ~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~--~~gvyT~V~~y~~WI~~~i~~  329 (329)
T 1md8_A          277 QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVDWIKKEMEE  329 (329)
T ss_dssp             TTTTTCEEEEEETTTTEEEEEEEEEECSSSSS--SCEEEEEGGGTHHHHHHHHHC
T ss_pred             CCccccceEEEECCCCcEEEEEEEEECCCcCC--CCcEEEEHHHHHHHHHHHHhC
Confidence            99999999995  4578999999999999984  489999999999999999863

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=100.00  E-value=8e-50  Score=353.50  Aligned_cols=219  Identities=32%  Similarity=0.635  Sum_probs=189.3

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+.        ..+.|++|..+...  ...+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLI~~~~VLTAAHC~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~   72 (225)
T 1npm_A            1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKK--------QKYSVRLGDHSLQSRDQPEQEIQVAQSI   72 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--------SSCEEEESCSBTTC--CCCEEECEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEeeCCceEEEEEEECCCEEEEhHHcCC--------CCceEEEeeeEcCCCCCCcEEEEEEEEE
Confidence            68999999999999999988778999999999999999999984        24678999887652  345788999999


Q ss_pred             ECCCC-CC--CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeech
Q psy13815        195 FHPSH-SC--SSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN  271 (388)
Q Consensus       195 ~hp~y-~~--~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~  271 (388)
                      .||+| +.  ....||||||||++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++..+++++.
T Consensus        73 ~Hp~y~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~~~~~~~~~~  149 (225)
T 1npm_A           73 QHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCP-KVGQKCIISGWGTVTSPQE--NFPNTLNCAEVKIYSQ  149 (225)
T ss_dssp             ECTTCCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECSSCC-CTTCEEEEEESSCSSSSSC--CCCSBCEEEEEEECCH
T ss_pred             ECCCCCCCCccCccccEEEEeeCCcccCCCceeceECCCCCC-CCCCEEEEEeCCcccCCCC--CCCccceEeEEeeecH
Confidence            99999 55  66789999999999999999999999998765 6788999999998743211  1367899999999999


Q ss_pred             hhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       272 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      ++|+..+..     .+.+.||||+... +.+.|                              .|||||||+++.    +
T Consensus       150 ~~C~~~~~~-----~~~~~~~Ca~~~~-~~~~C------------------------------~GDSGgPL~~~~----~  189 (225)
T 1npm_A          150 NKCERAYPG-----KITEGMVCAGSSN-GADTC------------------------------QGDSGGPLVCDG----M  189 (225)
T ss_dssp             HHHHHHSTT-----TCCTTEEEEECTT-CCBCC------------------------------TTCTTCEEEETT----E
T ss_pred             HHhhHHhCC-----CCCCCEEeecCCC-CCeec------------------------------CCCCCchheECC----E
Confidence            999988752     4688999998654 67889                              999999999953    6


Q ss_pred             EEEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        352 VIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       352 l~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+||+||| ..|..++.|++||||+.|++||+++|+
T Consensus       190 l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~  225 (225)
T 1npm_A          190 LQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTMD  225 (225)
T ss_dssp             EEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHHC
T ss_pred             EEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHhC
Confidence            99999999 589888899999999999999999874

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=100.00  E-value=1.9e-49  Score=353.23  Aligned_cols=221  Identities=34%  Similarity=0.661  Sum_probs=190.2

Q ss_pred             EecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC----CceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR----PSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~----~~~~~~~v~  191 (388)
                      |+||.   +++|||+|+|+.. +.++|+||||+++||||||||+....  .....+.|++|..+...    ...+.+.|.
T Consensus         1 IvgG~---~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~--~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~   75 (234)
T 2asu_B            1 VVGGH---PGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCH--MPLTGYEVWLGTLFQNPQHGEPSLQRVPVA   75 (234)
T ss_dssp             CBSCE---ECCCTTEEEEECTTSCEEEEEEEEETTEEEEEGGGSSCTT--CCCTTCEEEESCSBSSCCTTCTTCEEEEEE
T ss_pred             CCCcc---cCCCcceEEeeccCCCEEEEEEEEeCCEEEECHHHcCCCC--CCcccEEEEEeeeeccCCCCCCceEEEEEE
Confidence            57887   5789999999875 67899999999999999999996521  23466789999887653    345788999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.||.      .+|||||+|++|+.|++.++|||||..... ..+..++++|||.+.....    +..|++..+++++
T Consensus        76 ~i~~hp~------~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~----~~~L~~~~~~~~~  145 (234)
T 2asu_B           76 KMVCGPS------GSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGN----DTVLNVALLNVIS  145 (234)
T ss_dssp             EEEECST------TCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSC----TTBCEEEEEEEEC
T ss_pred             EEecCCC------CCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCC----CccceEEEeeEEc
Confidence            9999997      579999999999999999999999986643 5788999999999875432    6789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|+..+.     ..+.+.||||+...+..+.|                              +|||||||++..+++|
T Consensus       146 ~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~~~~~  190 (234)
T 2asu_B          146 NQECNIKHR-----GRVRESEMCTEGLLAPVGAC------------------------------EGDYGGPLACFTHNSW  190 (234)
T ss_dssp             HHHHHHHTT-----TCCCTTEEEECCCSSCCBCC------------------------------TTCTTCEEEEEETTEE
T ss_pred             HHHcccccC-----CccCcceEeecCCCCCCeec------------------------------cCCCCCceEEEECCeE
Confidence            999998774     24688999998876678899                              9999999999999999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+||+|||.+|..++.|++||||+.|++||+++++.
T Consensus       191 ~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~  227 (234)
T 2asu_B          191 VLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVMRL  227 (234)
T ss_dssp             EEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC--
T ss_pred             EEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHhhc
Confidence            9999999999999888999999999999999999864

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=100.00  E-value=2.5e-50  Score=360.31  Aligned_cols=224  Identities=30%  Similarity=0.596  Sum_probs=169.7

Q ss_pred             CeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEE
Q psy13815        115 GKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLR  192 (388)
Q Consensus       115 ~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~  192 (388)
                      .||+||.++..++|||+|+|+..+.++|+||||+++||||||||+.+        .+.|++|..+..  ....+.+.|.+
T Consensus         2 arIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~~   73 (240)
T 1sgf_A            2 APPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYND--------KYQVWLGKNNFLEDEPSDQHRLVSK   73 (240)
T ss_dssp             -----------CCCTTEEEEECTTSCCEEEEECSSSEEEECGGGCCS--------CCEEEECC----C-CTTCEEEEEEE
T ss_pred             CcccCCeECCCCCcCCEEEEEeCCCeEEEEEEecCCEEEECHHhCCC--------CceEEeCCcccccCCCCceEEEEEE
Confidence            58999999999999999999654678999999999999999999953        457889987764  33457789999


Q ss_pred             EEECCCCCCC-----------CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccc
Q psy13815        193 IMFHPSHSCS-----------SFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNIL  261 (388)
Q Consensus       193 i~~hp~y~~~-----------~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l  261 (388)
                      ++.||+|+..           ...||||||+|++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|
T Consensus        74 ~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L  150 (240)
T 1sgf_A           74 AIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEP-KLGSTCLASGWGSTTPIKF--KYPDDL  150 (240)
T ss_dssp             EEECTTSCGGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCC-CTTCEEEEC-------C----------
T ss_pred             EEcCCCCcccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCCCCC-CCCCEEEEEecCCCCCCCC--CCCccc
Confidence            9999999865           6789999999999999999999999998765 6788999999998865321  126789


Q ss_pred             eEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCc
Q psy13815        262 QKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP  341 (388)
Q Consensus       262 ~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgP  341 (388)
                      ++..+++++.++|+..+.     ..+.+.||||+...++.+.|                              +||||||
T Consensus       151 ~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgP  195 (240)
T 1sgf_A          151 QCVNLKLLPNEDCDKAHE-----MKVTDAMLCAGEMDGGSYTC------------------------------EHDSGGP  195 (240)
T ss_dssp             -CEEEEEECTHHHHTTCS-----SBCCTTEEEEEECSSSEEEC------------------------------CCCTTCE
T ss_pred             cEEeeeEeCHHHhhhhhC-----CCcCCCeEeEccCCCCCCCC------------------------------CCCCcCc
Confidence            999999999999988654     24688999999766678899                              9999999


Q ss_pred             eEEecCCccEEEEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        342 LMLLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       342 L~~~~~~~~~l~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      |+++.    +|+||+||| .+|..++.|+|||||+.|++||+++|+.+
T Consensus       196 L~~~~----~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~~  239 (240)
T 1sgf_A          196 LICDG----ILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANN  239 (240)
T ss_dssp             EEETT----EEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHHSC
T ss_pred             EEEcc----EEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHhcC
Confidence            99943    799999999 57998889999999999999999998753

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=100.00  E-value=2.8e-49  Score=350.48  Aligned_cols=219  Identities=36%  Similarity=0.646  Sum_probs=188.6

Q ss_pred             EecceecCCCCcceEEEEccC--C-ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--G-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~-~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|+|...  + .++|+||||+++||||||||+..        .+.|++|..+...  ...+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~   72 (227)
T 1euf_A            1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGS--------SINVTLGAHNIMERERTQQVIPVR   72 (227)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESSSSEEEEEEEEEETTEEEECGGGCCE--------EEEEEESCSBTTSCCTTCEEEEEE
T ss_pred             CCCCeECCCCCcCCEEEEEEeCCCCceEEEEEEeeCCEEEECHHHCCC--------CcEEEEcccccCCCCCccEEEEEE
Confidence            689999999999999999753  3 68999999999999999999853        5789999887653  345788999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.||+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..+++++
T Consensus        73 ~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~i~~  149 (227)
T 1euf_A           73 RPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPS---TDKLQEVDLEVQS  149 (227)
T ss_dssp             EEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCB---CSBCEEEEEEBCC
T ss_pred             EEEeCCCCCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCC---chhheEeEecccc
Confidence            9999999999889999999999999999999999999986543 57889999999998755432   6789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|...+..     .+.++||||+...+....|                              +|||||||++..    
T Consensus       150 ~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~~------------------------------~GDsGgPL~~~~----  190 (227)
T 1euf_A          150 EEKCIARFKN-----YIPFTQICAGDPSKRKNSF------------------------------SGDSGGPLVCNG----  190 (227)
T ss_dssp             THHHHTTCTT-----CCTTTEEEESCTTSCCBCC------------------------------TTCTTCEEEETT----
T ss_pred             HHHhhHhhcC-----cCCCcEEEccCCCCCCccc------------------------------ccCCCCceEECC----
Confidence            9999986642     4678999998765446677                              999999999954    


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+||+|||  |...+.|+|||||+.|++||+++|+.
T Consensus       191 ~l~Gi~S~g--c~~~~~p~vyt~V~~y~~WI~~~~~~  225 (227)
T 1euf_A          191 VAQGIVSYG--RNDGTTPDVYTRISSFLSWIHSTMRR  225 (227)
T ss_dssp             EEEEEEEEC--CTTCCSCEEEEEGGGTHHHHHHHTC-
T ss_pred             EEEEEEEEe--CCCCCCCeEEEEHHHhHHHHHHHHhh
Confidence            799999998  87667899999999999999999864

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=100.00  E-value=1.8e-49  Score=353.70  Aligned_cols=220  Identities=33%  Similarity=0.635  Sum_probs=191.2

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+. + ++|+||||+++||||||||+.        ..+.|++|..+..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-~-~~CgGsLIs~~~VLTAAHC~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~i~   70 (235)
T 1ton_A            1 IVGGYKCEKNSQPWQVAVIN-E-YLCGGVLIDPSWVITAAHCYS--------NNYQVLLGRNNLFKDEPFAQRRLVRQSF   70 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEES-S-SEEEEEEEETTEEEECGGGCC--------SCCEEEESCSBTTSCCTTCEEECEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEcc-C-CeEEEEEecCCEEEEcHHhCC--------CCcEEEeCcccccCCCCcceEEEEEEEE
Confidence            68999999999999999986 3 899999999999999999994        3467899988765  3345778999999


Q ss_pred             ECCCCCC-----------CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceE
Q psy13815        195 FHPSHSC-----------SSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK  263 (388)
Q Consensus       195 ~hp~y~~-----------~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~  263 (388)
                      .||+|+.           ....||||||+|++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++
T Consensus        71 ~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~~  147 (235)
T 1ton_A           71 RHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEP-KVGSTCLASGWGSTNPSEM--VVSHDLQC  147 (235)
T ss_dssp             ECTTCCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCC-CTTCEEEEEESSCSSSSSC--CCCSBCEE
T ss_pred             eCCCCcccccccccccccCCCcCCEEEEEcCCccccCCcceeeeCCCCCC-CCCCEEEEEecCCCCCCCC--ccCccceE
Confidence            9999987           67789999999999999999999999998765 6788999999999865421  12678999


Q ss_pred             EEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceE
Q psy13815        264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM  343 (388)
Q Consensus       264 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~  343 (388)
                      ..+++++.++|...+..     .+.+.||||+...+..+.|                              .|||||||+
T Consensus       148 ~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~  192 (235)
T 1ton_A          148 VNIHLLSNEKCIETYKD-----NVTDVMLCAGEMEGGKDTC------------------------------AGDSGGPLI  192 (235)
T ss_dssp             EEEEEECGGGCGGGGST-----TGGGGEEEEECTTCSCBCC------------------------------TTCTTCEEE
T ss_pred             EEEEEeCHHHHHHHhcC-----cCCCCeEeeccCCCCCcCC------------------------------CCCCccccE
Confidence            99999999999987752     4678999999766678899                              999999999


Q ss_pred             EecCCccEEEEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        344 LLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       344 ~~~~~~~~l~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      ++.    +|+||+||| ..|..++.|++||||+.|++||+++++.+
T Consensus       193 ~~~----~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~~  234 (235)
T 1ton_A          193 CDG----VLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKEN  234 (235)
T ss_dssp             ETT----EEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHHHC
T ss_pred             ECC----EEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHccC
Confidence            943    799999999 57998889999999999999999998753

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=100.00  E-value=4.5e-50  Score=359.28  Aligned_cols=232  Identities=33%  Similarity=0.598  Sum_probs=191.5

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCC-CCCccceEEEEeccccCCCC-ceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGP-SPLSASQINVTLKEHDLSRP-SISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~-~~~~~~~~~v~~g~~~~~~~-~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|...  +.|+||||+++||||||||+.... .......+.|++|..+.... ..+.+.|++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~--~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~   78 (242)
T 2qy0_B            1 IIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVS   78 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEESS--SEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEccC--CCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEE
Confidence            689999999999999999763  579999999999999999997421 11234567899997765321 22467899999


Q ss_pred             ECCCCCCC---CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        195 FHPSHSCS---SFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       195 ~hp~y~~~---~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +||+|+..   ...||||||||++|+.|++.++|||||..... ..+..++++|||.+...     .+..|+++.+++++
T Consensus        79 ~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~-----~~~~L~~~~~~~~~  153 (242)
T 2qy0_B           79 VHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK-----IAHDLRFVRLPVAN  153 (242)
T ss_dssp             ECTTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSS-----CCSBCEEEEEEBCC
T ss_pred             ECCCCccCcCCCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCc-----CCccceEEEEEEeC
Confidence            99999865   67899999999999999999999999976543 56788999999988653     26789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEe--cCC
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL--GAE  348 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~--~~~  348 (388)
                      .++|+..+........+.++||||+...+..+.|                              +|||||||++.  .++
T Consensus       154 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPl~~~~~~~~  203 (242)
T 2qy0_B          154 PQACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC------------------------------QGDSGGVFAVRDPNTD  203 (242)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCC------------------------------TTCTTCEEEEECTTTC
T ss_pred             HHHHHHHhccccccccCCCCEEeccCCCCCCccc------------------------------cCCCCCcEEEEECCCC
Confidence            9999987764322235788999998766678899                              99999999995  467


Q ss_pred             ccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       349 ~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+|+||+|||.+|..  .|++||||+.|++||+++++.
T Consensus       204 ~~~l~Gi~S~g~~C~~--~~~vyt~V~~y~~WI~~~~~~  240 (242)
T 2qy0_B          204 RWVATGIVSWGIGCSR--GYGFYTKVLNYVDWIKKEMEE  240 (242)
T ss_dssp             CEEEEEEEEECSSSSS--SCEEEEEGGGGHHHHHHHTTC
T ss_pred             eEEEEEEEEECCCcCC--CCcEEEEHHHHHHHHHHHhhc
Confidence            8999999999999984  489999999999999999875

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=100.00  E-value=1.1e-49  Score=382.57  Aligned_cols=247  Identities=32%  Similarity=0.603  Sum_probs=208.1

Q ss_pred             CCCCCCCccCCCCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC
Q psy13815        102 GVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS  181 (388)
Q Consensus       102 ~~~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~  181 (388)
                      .+.||..... ...||+||.++.+++|||+|+|..  .++|+||||+++||||||||+....  .....+.|++|.++..
T Consensus       148 ~~~CG~~~~~-~~~rIvgG~~a~~~~~Pw~v~l~~--~~~CgGsLIs~~~VLTAAHC~~~~~--~~~~~~~V~~G~~~~~  222 (403)
T 1zjk_A          148 EPVCGLSART-TGGQIYGGQKAKPGDFPWQVLILG--GTTAAGALLYDNWVLTAAHAVYEQK--HDASALDIRMGTLKRL  222 (403)
T ss_dssp             EECCCCCSSC-CSCCCSSCEECCTTSSTTEEEEEE--SCCEEEEEETTTEEEECHHHHGGGT--TCSTTEEEEESCSBTT
T ss_pred             CCCCCCCCCC-CCccccCCcCCCCCCcCCEeEecc--CCceEEEEecCCEEEEcHHhCCCCC--CCcceEEEEccccccC
Confidence            3579876532 457999999999999999999986  4689999999999999999997521  2246788999998765


Q ss_pred             CCceeeeceEEEEECCCCCCC-CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC---CCCCCeEEEEEccccCCCCCCCCC
Q psy13815        182 RPSISTVPVLRIMFHPSHSCS-SFNNDIALLELTRSIQWSDLIRPACLPSGSL---DYSEQSVTVAGWGWTNENPSQGRR  257 (388)
Q Consensus       182 ~~~~~~~~v~~i~~hp~y~~~-~~~~DIALl~L~~~v~~~~~v~picLp~~~~---~~~~~~~~~~GwG~~~~~~~~~~~  257 (388)
                      ....+.+.|+++++||+|+.. ...||||||||++|+.|++.++|||||....   ...+..++++|||.+....    .
T Consensus       223 ~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~----~  298 (403)
T 1zjk_A          223 SPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGF----L  298 (403)
T ss_dssp             CSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSC----C
T ss_pred             CCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCc----c
Confidence            556678899999999999987 7889999999999999999999999997653   2467889999999887642    2


Q ss_pred             CccceEEEEEeechhhhhhHhhcCC-CccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCC
Q psy13815        258 SNILQKVALSVVSNQVCQAWYQSEG-KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA  336 (388)
Q Consensus       258 ~~~l~~~~~~i~~~~~C~~~~~~~~-~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  336 (388)
                      +..|+++.+++++.++|+..+.... ....+.++||||+...++.+.|                              +|
T Consensus       299 ~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C------------------------------~G  348 (403)
T 1zjk_A          299 ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC------------------------------RG  348 (403)
T ss_dssp             CSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSC------------------------------SC
T ss_pred             CcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCCCCCC------------------------------cC
Confidence            7789999999999999998875321 1125789999999877788999                              99


Q ss_pred             cCCCceEEec--CCccEEEEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        337 DSGGPLMLLG--AESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       337 dsGgPL~~~~--~~~~~l~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ||||||++..  +++|+|+||+||| .+|+.++.|+|||||+.|++||+++|+.
T Consensus       349 DSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~  402 (403)
T 1zjk_A          349 DSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIISD  402 (403)
T ss_dssp             STTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHHTT
T ss_pred             CCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence            9999999974  5799999999999 7999888899999999999999999864

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=100.00  E-value=1.1e-49  Score=352.76  Aligned_cols=220  Identities=33%  Similarity=0.635  Sum_probs=192.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCC--ceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRP--SISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~--~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+.++.++|+||||+++||||||||+..      ...+.|++|..+....  ..+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~------~~~~~v~~G~~~~~~~~~~~~~~~v~~i~   74 (226)
T 1azz_A            1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDG------AGFVDVVLGAHNIREDEATQVTIQSTDFT   74 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTTEEEEEEEEETTEEEECHHHHTT------CSCEEEEESCSBSSSCCTTCEEEEECCEE
T ss_pred             CCCCEECCCCCcCCEEEEEECCcEEEEEEEecCCEEEEhHHhcCC------CCceEEEEcceEcCCCCCccEEEEEEEEE
Confidence            689999999999999999987789999999999999999999965      4567899998877533  45678999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .||+|+.....||||||||++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++..+++++.++|
T Consensus        75 ~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~~~~~~i~~~~~C  151 (226)
T 1azz_A           75 VHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDV-GVGTVVTPTGWGLPSDSAL--GISDVLRQVDVPIMSNADC  151 (226)
T ss_dssp             ECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSCC-CTTCEEEEEESSCSSTTCS--SSCSBCEECCEEEECHHHH
T ss_pred             ECCCCCCCCCCCceEEEEECCccccCCCcccccCCCCCC-CCCCEEEEEeCCccCCCCC--CCCchhEEeeEEEEChhHh
Confidence            999999988899999999999999999999999998775 6788999999998876431  1367899999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+.      .+.+.|||++. .++.+.|                              +|||||||+++.    +|+|
T Consensus       152 ~~~~~------~~~~~~~Ca~~-~~~~~~C------------------------------~GDSGgPL~~~~----~l~G  190 (226)
T 1azz_A          152 DAVYG------IVTDGNICIDS-TGGKGTC------------------------------NGDSGGPLNYNG----LTYG  190 (226)
T ss_dssp             HHHHS------CCCTTEEEECC-TTTCBCC------------------------------TTCTTCEEEETT----EEEE
T ss_pred             hhhhC------cCCCceEeecC-CCCCccC------------------------------CCCCCcceEECC----EEEE
Confidence            98874      47889999986 4567889                              999999999632    8999


Q ss_pred             EEEecC--CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        355 LVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       355 i~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|||.  +|.. +.|++||||+.|++||++++++
T Consensus       191 i~S~g~~~~C~~-~~p~vyt~V~~~~~WI~~~~~~  224 (226)
T 1azz_A          191 ITSFGAAAGCEA-GYPDAFTRVTYFLDWIQTQTGI  224 (226)
T ss_dssp             EEEEEETTCTTS-CCCEEEEESGGGHHHHHHHHCC
T ss_pred             EEEEECCCCCCC-CCCCEEEEHHHHHHHHHHHhCC
Confidence            999997  7864 7899999999999999999875

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=100.00  E-value=5.4e-49  Score=348.83  Aligned_cols=219  Identities=30%  Similarity=0.587  Sum_probs=191.8

Q ss_pred             EecceecCCCCcceEEEEccC---C-ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH---G-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~---~-~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|...   + .++|+||||+++||||||||+.        ..+.|++|.++..  ....+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~--------~~~~v~~G~~~~~~~~~~~~~~~v   72 (227)
T 3fzz_A            1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKG--------RSMTVTLGAHNIKAKEETQQIIPV   72 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECSSSCEEEEEEEEEETTEEEECTTCCC--------EEEEEEESCSBTTSCCTTCEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEEEeCCCceeEEEEEEEeCCEEEECcccCC--------CCcEEEEcccccCCCCCCceEEEE
Confidence            689999999999999999753   2 6799999999999999999983        4678999987765  334567899


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .+++.||+|+.....||||||+|++|+.+++.++|||||..... ..+..++++|||.+......   +..|++..++++
T Consensus        73 ~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~  149 (227)
T 3fzz_A           73 AKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEF---PKTLHEVKLTVQ  149 (227)
T ss_dssp             EEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCC---CSBCEEEEEEBC
T ss_pred             EEEEECcCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCC---CCeeeEEEeeee
Confidence            99999999999889999999999999999999999999987654 67889999999988765443   788999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|+..+..    ......|+|++...+..+.|                              .|||||||++..   
T Consensus       150 ~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~gDsGgPl~~~~---  192 (227)
T 3fzz_A          150 KDQVCESQFQS----SYNRANEICVGDSKIKGASF------------------------------EEDSGGPLVCKR---  192 (227)
T ss_dssp             CHHHHHHHHTT----TCCTTTEEEECCCSSCBCCT------------------------------TTTTTCEEEETT---
T ss_pred             cHHHhhhhhcc----ccCCCceEEEeCCCCCCccc------------------------------ccCCccceEEec---
Confidence            99999987752    24578999999877778889                              999999999964   


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                       +|+||+|||..|...  |.+||||+.|++||+++|+
T Consensus       193 -~l~Gi~S~g~~c~~~--p~vyt~V~~~~~WI~~~i~  226 (227)
T 3fzz_A          193 -AAAGIVSYGQTDGSA--PQVFTRVLSFVSWIKKTMK  226 (227)
T ss_dssp             -EEEEEEEECCTTCSS--SEEEEEGGGTHHHHHHHHT
T ss_pred             -CCcEEEEECCCCCCC--CeEEEEhHHhHHHHHHHHh
Confidence             799999999998753  9999999999999999986

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=100.00  E-value=6.6e-50  Score=356.97  Aligned_cols=221  Identities=29%  Similarity=0.541  Sum_probs=192.4

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+.        ..+.|++|..+..  ....+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~--------~~~~v~~G~~~~~~~~~~~~~~~v~~~~   72 (237)
T 1gvz_A            1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMS--------DDYQIWLGRHNLSKDEDTAQFHQVSDSF   72 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--------SSCEEEESCSBTTSCCTTCEEECEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEeeCCceEEEeEEeeCCEEEEcHHhCC--------CCCeEEEeecccccCCCCceEEEeeeEe
Confidence            68999999999999999988788999999999999999999984        3467899988775  3346788999999


Q ss_pred             ECCCCCCCCC-----------CCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceE
Q psy13815        195 FHPSHSCSSF-----------NNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK  263 (388)
Q Consensus       195 ~hp~y~~~~~-----------~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~  263 (388)
                      .||+|+....           .||||||+|++|+.|++.++|||||.... ..+..++++|||.+.....  ..+..|++
T Consensus        73 ~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~L~~  149 (237)
T 1gvz_A           73 LDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEP-KLGSTCYTSGWGLISTFTN--RGSGTLQC  149 (237)
T ss_dssp             ECTTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEEEECSCTTTC--SEEEEEEE
T ss_pred             cCCccCcccccccccccccccCCceEEEEeCCCcccCCcEeeeECCCCCC-CCCCEEEEECCCcccCCCC--CCCCccEE
Confidence            9999987665           89999999999999999999999998765 6788999999998743221  13678999


Q ss_pred             EEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceE
Q psy13815        264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM  343 (388)
Q Consensus       264 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~  343 (388)
                      +.+++++.++|+..+..     .+.+.||||+...+..+.|                              +|||||||+
T Consensus       150 ~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~  194 (237)
T 1gvz_A          150 VELRLQSNEKCARAYPE-----KMTEFVLCATHRDDSGSIC------------------------------LGDSGGALI  194 (237)
T ss_dssp             EEEEEECGGGGCSSCGG-----GCCTTEEEEECSSTTCEEC------------------------------GGGTTCEEE
T ss_pred             EEEeEeChhHhhhhhhh-----cCCCceEEEeeCCCCCccC------------------------------CCCccCcEe
Confidence            99999999999987652     4688999999866677889                              999999999


Q ss_pred             EecCCccEEEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        344 LLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       344 ~~~~~~~~l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ++.    +|+||+|||. .|..++.|++||||+.|++||+++|+.
T Consensus       195 ~~~----~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~  235 (237)
T 1gvz_A          195 CDG----VFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIEK  235 (237)
T ss_dssp             ETT----EEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHHH
T ss_pred             eCC----EEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence            953    7999999998 898778999999999999999999864

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=100.00  E-value=5.2e-49  Score=349.66  Aligned_cols=219  Identities=31%  Similarity=0.656  Sum_probs=191.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC---CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS---RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|+. +.++|+||||+++||||||||+.+        .+.|++|..+..   ....+.+.|.++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-~~~~CgGsLIs~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~~v~~~   71 (231)
T 2aiq_A            1 VIGGDECNINEHRFLALVYA-NGSLCGGTLINQEWVLTARHCDRG--------NMRIYLGMHNLKVLNKDALRRFPKEKY   71 (231)
T ss_dssp             CBSCEECCTTSCTTEEEEEE-TTEEEEEEECSSSEEEECGGGCCS--------SCEEEESCSCTTSCCTTCEEECEEEEE
T ss_pred             CCCCeECCCCCCCeEEEEEc-CCCeEEEEEEeCCEEEEcHHcCCC--------CCEEEEecccccccCCCceEEEEEEEE
Confidence            68999999999999999985 468899999999999999999854        467889987765   234567889999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      +.||+|+.....||||||||++|+.+++.++|||||.... ..+..++++|||.+.....  ..+..|++..+++++.++
T Consensus        72 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~l~~~~~~~~~~~~  148 (231)
T 2aiq_A           72 FCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPP-SVGSVCRIMGWGTITSPNA--TLPDVPHCANINILDYAV  148 (231)
T ss_dssp             CCSSCCSSSTTTTCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCSSSSSC--CCCSSCEEEEEEEECHHH
T ss_pred             EECCCCCCCCCCCCEEEEEecCCCCCCCcEEeeECCCCCC-CCCCEEEEEeCCccCCCCC--ccCchhhhccceecchhh
Confidence            9999999988999999999999999999999999998776 6788999999998765322  126789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |+..+.      .+.+.||||+...+..+.|                              .|||||||++.+    +|+
T Consensus       149 C~~~~~------~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----~l~  188 (231)
T 2aiq_A          149 CQAAYK------GLAATTLCAGILEGGKDTC------------------------------KGDSGGPLICNG----QFQ  188 (231)
T ss_dssp             HHHHCT------TCCSSEEEEECTTCSCBCC------------------------------TTCTTCEEEETT----EEE
T ss_pred             hhhhhc------CCCcCcEEeccCCCCCccc------------------------------CCcCCCcEEECC----EEE
Confidence            998775      2688999998766778899                              999999999953    799


Q ss_pred             EEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        354 GLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       354 Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ||+||| ..|..++.|++||||+.|++||+++++.
T Consensus       189 Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~  223 (231)
T 2aiq_A          189 GILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG  223 (231)
T ss_dssp             EEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred             EEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence            999999 6898888999999999999999999864

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=100.00  E-value=8.4e-50  Score=356.99  Aligned_cols=225  Identities=34%  Similarity=0.593  Sum_probs=184.6

Q ss_pred             cceecCCCCcceEEEEcc--CC--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCC--ce--eeece
Q psy13815        119 GGLAANPGEFPWIVSLKR--HG--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRP--SI--STVPV  190 (388)
Q Consensus       119 ~g~~~~~~~~Pw~v~i~~--~~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~--~~--~~~~v  190 (388)
                      ||.++.+++|||+|+|+.  .+  .++|+||||+++||||||||+..      ...+.|++|..+....  ..  +.+.|
T Consensus         1 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAhC~~~------~~~~~v~~G~~~~~~~~~~~~~~~~~v   74 (240)
T 1fon_A            1 NGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST------SRTYQVVLGEYDRSVLEGSEQVIPINA   74 (240)
T ss_dssp             --------CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCT------TSCEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             CCccCCcCCcccEEEEEEecCCcEeeEEEEEEeeCCEEEECHHHCCC------CCceEEEeeeeeccccCCCceeEeeee
Confidence            688899999999999986  33  48999999999999999999965      3567899998876522  23  67889


Q ss_pred             EEEEECCCCCCCCCC--CcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEE
Q psy13815        191 LRIMFHPSHSCSSFN--NDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALS  267 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~--~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~  267 (388)
                      .++++||+|+.....  ||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..++
T Consensus        75 ~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~  151 (240)
T 1fon_A           75 GDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPL---PDKLQQALLP  151 (240)
T ss_dssp             TSEEECTTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSC---CSBCEEEECC
T ss_pred             eEEEECCCCcCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCC---ChhheEEEEe
Confidence            999999999987777  99999999999999999999999987543 56788999999988765433   7789999999


Q ss_pred             eechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec-
Q psy13815        268 VVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG-  346 (388)
Q Consensus       268 i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~-  346 (388)
                      +++.++|+..+.   ....+.+.||||+.. + .+.|                              +|||||||++.. 
T Consensus       152 ~~~~~~C~~~~~---~~~~~~~~~~Ca~~~-~-~~~C------------------------------~GDsGgPL~~~~~  196 (240)
T 1fon_A          152 TVDYEHCSQWDW---WGITVKKTMVCAGGD-T-RSGC------------------------------NGDSGGPLNCPAA  196 (240)
T ss_dssp             EECHHHHTSTTT---TGGGCCTTEEEECCS-S-SCST------------------------------TSCTTCEEEEECS
T ss_pred             eeCHHHhcccee---cCCccccceEeecCC-C-Cccc------------------------------CCCCCCeEEeEcC
Confidence            999999987532   122578899999843 3 7889                              999999999976 


Q ss_pred             CCccEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        347 AESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       347 ~~~~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +++|+|+||+||+.  +|...+.|++||||+.|++||+++|+.
T Consensus       197 ~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~~  239 (240)
T 1fon_A          197 DGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIAS  239 (240)
T ss_dssp             SSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHHH
T ss_pred             CCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHHhc
Confidence            78999999999986  898778999999999999999999875

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=100.00  E-value=3.2e-49  Score=349.62  Aligned_cols=222  Identities=32%  Similarity=0.553  Sum_probs=191.8

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|.    +.|+||||+++||||||||+...   .....+.|++|..+......+.+.|.+++.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~----~~CgGtLI~~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~h   73 (224)
T 3beu_A            1 VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSGS---GNNTSITATGGVVDLQSSSAVKVRSTKVLQA   73 (224)
T ss_dssp             CBTCEECCTTTSTTEEEET----TTEEEEEEETTEEEECGGGSCSS---EEBCCCEEEESCSBTTCTTCEEEEEEEEEEC
T ss_pred             CCCCeECCCCCCCEEEEEC----CceeEEEeeCCEEEEChhhcCCC---CCcceEEEEeeEeecCCCCceEEEEEEEEeC
Confidence            6899999999999999996    35999999999999999999762   2345678999998887666678899999999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA  276 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~  276 (388)
                      |+|+.....||||||||++|+.+    .|+||+.... ..+..++++|||.+......   +..|++..+++++.++|+.
T Consensus        74 p~y~~~~~~~DIALl~L~~~v~~----~~i~l~~~~~-~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~~~~~C~~  145 (224)
T 3beu_A           74 PGFTKETYGKDWALIKLAQPINQ----PTLKIATTTA-YNQGTFTVAGWGANREGGSQ---QRYLLKANVPFVSDAACRS  145 (224)
T ss_dssp             TTCCCGGGSCCCEEEEESSCCCS----CCCEECCSST-TSSSEEEEEESSCSSTTCCC---CSBCEEEEEEEECHHHHHH
T ss_pred             CCcCCCcCCCCEEEEEeCCCCCC----Cccccccccc-cCCCEEEEEecCccCCCCcc---cceeeEeeCcccCHHHhhh
Confidence            99998888999999999999963    6889987554 45568999999998765433   7789999999999999998


Q ss_pred             HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec-CCccEEEEE
Q psy13815        277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG-AESTQVIGL  355 (388)
Q Consensus       277 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~-~~~~~l~Gi  355 (388)
                      .+..    ..+.+.||||+...+..+.|                              .|||||||++.. +++|+|+||
T Consensus       146 ~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~~~~~~~l~Gi  191 (224)
T 3beu_A          146 SSSF----ILVANEMICAGYDTKQEDTC------------------------------QGDSGGPMFRKDNADEWVQVGI  191 (224)
T ss_dssp             HCSS----CCCGGGEEEECCSSSSCBCC------------------------------TTCTTCEEEEECTTSCEEEEEE
T ss_pred             hcCC----ccCCCCeEEeccCCCCCcCC------------------------------CCcCCCeeEEecCCCCEEEEEE
Confidence            7641    24678999998766678889                              999999999986 689999999


Q ss_pred             EEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        356 VSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       356 ~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|||.+|..++.|++||||+.|++||+++++.
T Consensus       192 ~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~  223 (224)
T 3beu_A          192 VSWGEGCARKGKYGVYTEVSTFASAIASAART  223 (224)
T ss_dssp             EEEESSSSCTTCCEEEEEHHHHHHHHHHHHTT
T ss_pred             eccCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence            99999999888999999999999999999863

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=100.00  E-value=1.1e-48  Score=345.95  Aligned_cols=217  Identities=31%  Similarity=0.590  Sum_probs=186.8

Q ss_pred             EecceecCCCCcceEEEEccC--C-ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--G-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~-~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|+|...  + .++|+||||+++||||||||+.+        .+.|++|..+...  ...+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~   72 (224)
T 1cgh_A            1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGS--------NINVTLGAHNIQRRENTQQHITAR   72 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEESTTTTSCEEEEEEEETTEEEECGGGCCS--------SEEEEESCSBTTSCCTTCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEECCCCCeEEEEEEeeCCEEEEhHHhCCC--------CCEEEEeecccCCCCCccEEEEEE
Confidence            689999999999999999763  3 48999999999999999999954        4789999887653  346788999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.||+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+... .   .+..|++..+++++
T Consensus        73 ~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~-~---~~~~l~~~~~~i~~  148 (224)
T 1cgh_A           73 RAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMR-R---GTDTLREVQLRVQR  148 (224)
T ss_dssp             EEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSS-C---CCSBCEEEEEEBCC
T ss_pred             EEEcCCCCCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCC-C---CCCcceEEEEEeeC
Confidence            9999999999889999999999999999999999999986653 57889999999998732 2   27789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|...+..     ...+.||||+...+..+.|                              .|||||||++.+    
T Consensus       149 ~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----  189 (224)
T 1cgh_A          149 DRQCLRIFGS-----YDPRRQICVGDRRERKAAF------------------------------KGDSGGPLLCNN----  189 (224)
T ss_dssp             HHHHHHHCTT-----CCTTTEEEECCTTSCCBCC------------------------------TTCTTCEEEETT----
T ss_pred             HHHHHHHhCc-----CCCcceEeeccCCCCCeEe------------------------------eCCCccceEEcc----
Confidence            9999987741     3456699998776678889                              999999999954    


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +|+||+|||. |. .+.|++||||+.|++||+++|+
T Consensus       190 ~l~Gi~S~g~-~~-~~~p~vyt~V~~~~~WI~~~~~  223 (224)
T 1cgh_A          190 VAHGIVSYGK-SS-GVPPEVFTRVSSFLPWIRTTMR  223 (224)
T ss_dssp             EEEEEEEECC-TT-CCSCEEEEEGGGGHHHHHHHHH
T ss_pred             EEEEEEEEEC-CC-CCCCeEEEEHHHhHHHHHHHhh
Confidence            7999999998 32 3569999999999999999986

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.9e-50  Score=384.76  Aligned_cols=239  Identities=33%  Similarity=0.626  Sum_probs=197.8

Q ss_pred             CCeEecceecCCCCcceEEEEccC--CceeEEEEEeeCCEEEecCcCCCCCC--CCCccceEEEEeccccCCC---Ccee
Q psy13815        114 TGKIVGGLAANPGEFPWIVSLKRH--GGHFCGGTIIHEQWIVTAAHCLCNGP--SPLSASQINVTLKEHDLSR---PSIS  186 (388)
Q Consensus       114 ~~~i~~g~~~~~~~~Pw~v~i~~~--~~~~C~GtLI~~~~VLTAAhCv~~~~--~~~~~~~~~v~~g~~~~~~---~~~~  186 (388)
                      ..||+||.++.+++|||+|+|+..  +.++|+||||+++||||||||+....  .......+.|++|.++...   ...+
T Consensus       163 ~~RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~  242 (424)
T 3nxp_A          163 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEK  242 (424)
T ss_dssp             SSCCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCE
T ss_pred             CCeeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCcee
Confidence            579999999999999999999764  46899999999999999999995311  1234567899999987753   2345


Q ss_pred             eeceEEEEECCCCC-CCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC----CCCCeEEEEEccccCCC---CCCCCCC
Q psy13815        187 TVPVLRIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD----YSEQSVTVAGWGWTNEN---PSQGRRS  258 (388)
Q Consensus       187 ~~~v~~i~~hp~y~-~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~----~~~~~~~~~GwG~~~~~---~~~~~~~  258 (388)
                      .+.|+++++||+|+ .....||||||+|++|+.|+++|+|||||.....    ..+..++++|||.+...   ......+
T Consensus       243 ~~~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~  322 (424)
T 3nxp_A          243 ISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQP  322 (424)
T ss_dssp             EECEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CC
T ss_pred             EEEEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCC
Confidence            67899999999998 4577899999999999999999999999975431    35788999999986431   0001126


Q ss_pred             ccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCC---CCcCcccCCcccCCcccccccccCCCCCCCCCCCCCC
Q psy13815        259 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ---GGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ  335 (388)
Q Consensus       259 ~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~---~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (388)
                      ..|+++.+++++.++|+..+.     ..+.++||||+...   ...+.|                              +
T Consensus       323 ~~L~~~~v~ii~~~~C~~~~~-----~~i~~~~iCAg~~~~~~~~~d~C------------------------------~  367 (424)
T 3nxp_A          323 SVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDAC------------------------------E  367 (424)
T ss_dssp             SBCEEEEEEBCCHHHHHHTCS-----SCCCTTEEEESCCCBTTBCCCTT------------------------------C
T ss_pred             ccceEEEeeEEcHHHhhhhcc-----CcCCCCeEecccCCCCCCCCccC------------------------------C
Confidence            789999999999999998654     35789999998643   235888                              9


Q ss_pred             CcCCCceEEec--CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        336 ADSGGPLMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       336 gdsGgPL~~~~--~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |||||||++..  +++|+|+||+|||.+|+..+.|+|||||+.|++||+++|+.
T Consensus       368 GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgVyT~Vs~y~~WI~~~i~~  421 (424)
T 3nxp_A          368 GDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ  421 (424)
T ss_dssp             SCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEEEEECTTCHHHHHHHHHH
T ss_pred             CcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
Confidence            99999999985  78999999999999999989999999999999999999863

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=100.00  E-value=8e-49  Score=347.52  Aligned_cols=218  Identities=32%  Similarity=0.575  Sum_probs=186.9

Q ss_pred             EecceecCCCCcceEEEEccCC----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|....    .++|+||||+++||||||||+.        ..+.|++|..+..  ....+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~--------~~~~v~~G~~~~~~~~~~~~~~~v   72 (226)
T 4ag1_A            1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG--------RSITVTLGAHNITEEEDTWQKLEV   72 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECSSSSCEEEEEEEEETTEEEECGGGCC--------SEEEEEESCSBTTSCCTTCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEEcCCCcccEEEEEEEeCCEEEECcccCC--------CCeEEEeCCcccCCCCCcceEEEE
Confidence            6899999999999999997542    6889999999999999999984        3678999988765  334467899


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .+++.||+|+.....||||||||++|+.+++.++|+|||..... ..+..++++|||.+......   +..|++..++++
T Consensus        73 ~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~  149 (226)
T 4ag1_A           73 IKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPG---SDTLQEVKLRLM  149 (226)
T ss_dssp             EEEEECTTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCB---CSBCEEEEEEEE
T ss_pred             EEEEeCCCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCC---CCEeEEEEEEEc
Confidence            99999999999999999999999999999999999999976653 57889999999998765433   788999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|.....      ...+.||||+...+..+.|                              +|||||||++..   
T Consensus       150 ~~~~C~~~~~------~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~---  190 (226)
T 4ag1_A          150 DPQACSHFRD------FDHNLQLCVGNPRKTKSAF------------------------------KGDSGGPLLCAG---  190 (226)
T ss_dssp             CGGGGTTSTT------CCTTTEEEESCTTSCCBCC------------------------------TTCTTCEEEETT---
T ss_pred             ChHHcccccC------cCccceEeeccCCCCCcCc------------------------------cCCCCCceEEcC---
Confidence            9999984322      4578999999877788899                              999999999943   


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                       +|+||+|||..|...  |++||+|+.|++||+++|+.
T Consensus       191 -~l~Gi~S~g~~c~~~--p~vyt~v~~~~~WI~~~i~~  225 (226)
T 4ag1_A          191 -VAQGIVSYGRSDAKP--PAVFTRISHYRPWINQILQA  225 (226)
T ss_dssp             -EEEEEEEECBTTCCS--CEEEEEHHHHHHHHHHHHHH
T ss_pred             -EEEEEEEECCCCCCC--CCEEEEhHHHHHHHHHHHhc
Confidence             799999999999764  99999999999999999874

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=100.00  E-value=1.5e-48  Score=347.70  Aligned_cols=222  Identities=30%  Similarity=0.561  Sum_probs=191.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC---CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS---RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+..        .+.|++|.....   ........+..+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~--------~~~v~~g~~~~~~~~~~~~~~~~~~~~   72 (234)
T 3s69_A            1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCDNT--------NFQMKLGVHSKKVLNEDEQTRNPKEKF   72 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEECSSCEEEEEEEEETTEEEECGGGCCS--------SCEEEESCCCSSSCCTTCEEECEEEEE
T ss_pred             CCCCccCCCCCCceEEEEeeCCCeEEeEEEeeCCEEEEchhhCCC--------CceEEecccccccccCCcceeeceEEE
Confidence            689999999999999999988889999999999999999999853        356888877654   223334456677


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      +.||.|+.....||||||+|++|+.+++.++|||||.... ..+..++++|||.+.....  ..+..|+...+++++.++
T Consensus        73 ~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~l~~~~~~~~~~~~  149 (234)
T 3s69_A           73 ICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSSPP-SVGSVCHIMGWGSITPIKV--TYPDVPYCAYINLLDDAV  149 (234)
T ss_dssp             ECTTCCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCSSSSSC--CCCSSCEEEEEEEECHHH
T ss_pred             ECCCccCCCCCcccEEEEeeCCcCCCCCcceeeecCCCCC-CCCCEEEEEECCCCCCCCc--CcccccceeEEeecCHHH
Confidence            7799999999999999999999999999999999998776 5689999999999876432  237789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |+..+..    ..+...||||+...+..+.|                              .|||||||++..    .|+
T Consensus       150 C~~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----~l~  191 (234)
T 3s69_A          150 CQAGYPE----LLTEYRTLCAGILEGGKDTC------------------------------GGDSGGPLICNG----QFQ  191 (234)
T ss_dssp             HHHHCTT----CCTTSCEEEEECTTCSCBCC------------------------------TTCTTCEEEETT----EEE
T ss_pred             Hhhhccc----ccCCcceEeccCCCCCCccC------------------------------CCCCccceEEcC----EEE
Confidence            9998752    35688999999877788999                              999999999965    499


Q ss_pred             EEEEecCC-CCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       354 Gi~s~g~~-c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ||+|||.. |...+.|++||||+.|++||+++|+.
T Consensus       192 Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~  226 (234)
T 3s69_A          192 GIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAG  226 (234)
T ss_dssp             EEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred             EEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcC
Confidence            99999985 99888999999999999999999864

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=100.00  E-value=4.1e-49  Score=369.06  Aligned_cols=242  Identities=29%  Similarity=0.578  Sum_probs=188.8

Q ss_pred             CCCCCCCCCCccC-CCCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEecc
Q psy13815         99 PIAGVPCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKE  177 (388)
Q Consensus        99 ~~~~~~cg~~~~~-~~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~  177 (388)
                      +...+.||..... ....||+||.++.+++|||+|+|..   .+|+||||+++||||||||+...      ....|++|.
T Consensus        64 ~~c~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~---~~CgGsLIs~~~VLTAAHC~~~~------~~~~v~~G~  134 (333)
T 1elv_A           64 PKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDN---PWAGGALINEYWVLTAAHVVEGN------REPTMYVGS  134 (333)
T ss_dssp             CCEEECCSCCSSCC-----CBTCEECCGGGSTTEEEEET---TEEEEEEEETTEEEECHHHHTTC------SSCCEECSC
T ss_pred             ccccCCcCCCCCcccccceeecCcccCCCCcCeEEEecC---CceeEEEecCCEEEehhheeCCC------CCCeEEEee
Confidence            3334579876532 1347999999999999999999952   37999999999999999999762      123788898


Q ss_pred             ccCCCCceeeece---EEEEECCCCCC-------CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC---CCCCeEEEEE
Q psy13815        178 HDLSRPSISTVPV---LRIMFHPSHSC-------SSFNNDIALLELTRSIQWSDLIRPACLPSGSLD---YSEQSVTVAG  244 (388)
Q Consensus       178 ~~~~~~~~~~~~v---~~i~~hp~y~~-------~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~---~~~~~~~~~G  244 (388)
                      ++......+.+.|   .++++||+|+.       ....||||||||++|+.|++.++|||||.....   ..+..++++|
T Consensus       135 ~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~G  214 (333)
T 1elv_A          135 TSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISG  214 (333)
T ss_dssp             SBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEE
T ss_pred             eecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEE
Confidence            8765444455566   99999999984       567899999999999999999999999976532   4578999999


Q ss_pred             ccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCC----CccccCCCeEEeccCCCCcCcccCCcccCCcccccccc
Q psy13815        245 WGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG----KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRV  320 (388)
Q Consensus       245 wG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~----~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~  320 (388)
                      ||.+....    .+..|+++.+++++.++|+..+....    ....++++||||+... +.+.|                
T Consensus       215 WG~t~~~~----~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~-~~~~C----------------  273 (333)
T 1elv_A          215 WGRTEKRD----RAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEK-GMDSC----------------  273 (333)
T ss_dssp             SCCCSSCS----SCSBCEEEEEEEECHHHHHTC----------CCCCCTTEEEEECST-TCBCC----------------
T ss_pred             CcCcCCCC----cCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeECccCCC-CCCcC----------------
Confidence            99987632    27789999999999999998664211    1125788999998755 67889                


Q ss_pred             cCCCCCCCCCCCCCCCcCCCceEEec--CC-ccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        321 YPSHRSGVHWDPPLQADSGGPLMLLG--AE-STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       321 ~~~~~~~~~~~~~~~gdsGgPL~~~~--~~-~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                                    +|||||||++..  ++ +|+|+||+|||.+|+.   |+|||||+.|++||+++|+.
T Consensus       274 --------------~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~~---~~vyt~V~~y~~WI~~~~~~  326 (333)
T 1elv_A          274 --------------KGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT---YGLYTRVKNYVDWIMKTMQE  326 (333)
T ss_dssp             --------------TTCTTCEEEEECSSCTTCEEEEEEEEECSSTTS---EEEEEEGGGGHHHHHHHHHH
T ss_pred             --------------cCcCCCceEEEECCCCcEEEEEEEEeeCCCCCC---CcEEeEHHHHHHHHHHHHhc
Confidence                          999999999974  34 8999999999999974   89999999999999999864

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.7e-49  Score=361.80  Aligned_cols=227  Identities=22%  Similarity=0.367  Sum_probs=183.5

Q ss_pred             CCCCCCCccCCCCCeEecceecCCCCcceEEEEcc-CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccC
Q psy13815        102 GVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL  180 (388)
Q Consensus       102 ~~~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~-~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~  180 (388)
                      ...||+....        |.++.+++|||+|+|.. .+.++|+||||+++||||||||+.+      ...+.|++|.++.
T Consensus        46 ~c~CG~~~~~--------g~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~------~~~~~V~~G~~~~  111 (283)
T 3f1s_B           46 QCACGVLTSE--------KRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLL------HRNITVKTYFNRT  111 (283)
T ss_dssp             TTCTTCCCC----------------CCTTEEEEECTTSCEEEEEEEEETTEEEECHHHHTS------CSSCEEEECTTC-
T ss_pred             ccccCccccC--------CccccccccCCEEEEEecCCCeeeccEEecCCEEEEcHHhcCc------cCceEEEEeeeeC
Confidence            3468876521        88999999999999986 5688999999999999999999965      3467899998765


Q ss_pred             CCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCC----CCCCCCeEEEEEccccCCCCCCCC
Q psy13815        181 SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS----LDYSEQSVTVAGWGWTNENPSQGR  256 (388)
Q Consensus       181 ~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~----~~~~~~~~~~~GwG~~~~~~~~~~  256 (388)
                      .. ..+.+.|.++++||+|+.....||||||||++|+.|+++++|||||...    ....+..++++|||..  ..   .
T Consensus       112 ~~-~~~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~--~~---~  185 (283)
T 3f1s_B          112 SQ-DPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARN--GT---D  185 (283)
T ss_dssp             CC-CCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC--------
T ss_pred             CC-CcEEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCC--CC---C
Confidence            43 5578899999999999998999999999999999999999999999865    2256888999999982  22   2


Q ss_pred             CCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCC
Q psy13815        257 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA  336 (388)
Q Consensus       257 ~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  336 (388)
                      .+..|+++.+++++.++|+..+..     .++++||||+...   ..|                              .|
T Consensus       186 ~~~~L~~~~v~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~---~~~------------------------------~g  227 (283)
T 3f1s_B          186 LGNSLTTRPVTLVEGEECGQVLNV-----TVTTRTYCERSSV---AAM------------------------------HW  227 (283)
T ss_dssp             ----CEEEEEEEECHHHHHHHHTS-----CCCTTEEEEECSS---CGG------------------------------GB
T ss_pred             CCceeeEEEEeEeCHHHHhhhhcC-----CCCCCeEcccCCC---CCC------------------------------CC
Confidence            377899999999999999998752     5789999997542   245                              78


Q ss_pred             cCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       337 dsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ||||||++..+++|+|+||+||+. |..++.|+|||||+.|++||+++|+.
T Consensus       228 DSGgPlv~~~~~~~~l~GIvS~g~-c~~~~~p~vyt~V~~y~~WI~~~~~~  277 (283)
T 3f1s_B          228 MDGSVVTREHRGSWFLTGVLGSQP-VGGQAHMVLVTKVSRYSLWFKQIMNA  277 (283)
T ss_dssp             CTTCEEEEECSSCEEEEEEECCCS-GGGCSSEEEEEEGGGGHHHHHHHHTC
T ss_pred             CCCCcEEEEECCEEEEEEEEEeCC-CCCCCcceEEEEhHHhHHHHHHHhhc
Confidence            999999999999999999999985 76678999999999999999999875

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=100.00  E-value=3e-49  Score=357.51  Aligned_cols=236  Identities=33%  Similarity=0.619  Sum_probs=194.6

Q ss_pred             EecceecCCCCcceEEEEccC--CceeEEEEEeeCCEEEecCcCCCCCC--CCCccceEEEEeccccCCC---Cceeeec
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--GGHFCGGTIIHEQWIVTAAHCLCNGP--SPLSASQINVTLKEHDLSR---PSISTVP  189 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~~~~C~GtLI~~~~VLTAAhCv~~~~--~~~~~~~~~v~~g~~~~~~---~~~~~~~  189 (388)
                      |+||.++.+++|||+|+|+..  ..++|+||||+++||||||||+....  .......+.|++|..+...   ...+...
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~   80 (259)
T 3rm2_H            1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM   80 (259)
T ss_dssp             CBSCEECCTTSSTTEEEEEEETTEEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEECCCCceEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeE
Confidence            689999999999999999654  36799999999999999999995311  1234567899999887642   2334556


Q ss_pred             eEEEEECCCCC-CCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC----CCCCeEEEEEccccCCCCCC---CCCCccc
Q psy13815        190 VLRIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD----YSEQSVTVAGWGWTNENPSQ---GRRSNIL  261 (388)
Q Consensus       190 v~~i~~hp~y~-~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~----~~~~~~~~~GwG~~~~~~~~---~~~~~~l  261 (388)
                      |+++++||+|+ .....||||||+|++|+.|++.++|||||.....    ..+..++++|||.+......   ...+..|
T Consensus        81 v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l  160 (259)
T 3rm2_H           81 LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL  160 (259)
T ss_dssp             EEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBC
T ss_pred             EEEEEECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccc
Confidence            99999999998 4677899999999999999999999999975431    46889999999987653211   1126689


Q ss_pred             eEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCC---CCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcC
Q psy13815        262 QKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ---GGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS  338 (388)
Q Consensus       262 ~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~---~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gds  338 (388)
                      +++.+++++.++|+..+.     ..+.++||||+...   ...+.|                              +|||
T Consensus       161 ~~~~~~~~~~~~C~~~~~-----~~~~~~~~Cag~~~~~~~~~~~C------------------------------~GDs  205 (259)
T 3rm2_H          161 QVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDAC------------------------------EGDS  205 (259)
T ss_dssp             EEEEEEBCCHHHHHHTCS-----SCCCTTEEEECCCGGGSCCCBCC------------------------------TTCT
T ss_pred             eEEEEEEeCHHHhhhhhc-----ccCCCceEeeeccCCCCCCCccc------------------------------CCCC
Confidence            999999999999998764     35789999998642   235788                              9999


Q ss_pred             CCceEEec--CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        339 GGPLMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       339 GgPL~~~~--~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ||||++..  +++|+|+||+|||.+|..++.|++||+|+.|++||+++|+.
T Consensus       206 GgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~~  256 (259)
T 3rm2_H          206 GGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ  256 (259)
T ss_dssp             TCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHHHH
T ss_pred             CCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHHH
Confidence            99999987  78999999999999999888999999999999999999864

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=100.00  E-value=8.7e-49  Score=346.82  Aligned_cols=217  Identities=30%  Similarity=0.533  Sum_probs=189.2

Q ss_pred             EecceecCCCCcceEEEEccCC----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|....    .++|+||||+++||||||||+.        ..+.|++|..+..  ....+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~--------~~~~v~~g~~~~~~~~~~~~~~~v   72 (224)
T 3rp2_A            1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKG--------REITVILGAHDVRKRESTQQKIKV   72 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCC--------SEEEEEESCSBTTSCCTTCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCcEEEEEeEEeeCCEEEEchhcCC--------CCcEEEEeccccCcCCCCcEEEEE
Confidence            6899999999999999997643    6799999999999999999983        3678999988764  344567899


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .+++.||+|+.....||||||||++|+.|++.++|+|||..... ..+..++++|||.+......   +..|++..++++
T Consensus        73 ~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~  149 (224)
T 3rp2_A           73 EKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPT---SYTLREVELRIM  149 (224)
T ss_dssp             EEEEECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEE---CSBCEEEEEEEE
T ss_pred             EEEEECCCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCC---CceeeEeeeeec
Confidence            99999999999889999999999999999999999999987654 67889999999998765432   678999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|....      ....+.++|++...+..+.|                              .|||||||++..   
T Consensus       150 ~~~~C~~~~------~~~~~~~~Ca~~~~~~~~~C------------------------------~GDsGgPl~~~~---  190 (224)
T 3rp2_A          150 DEKACVDYR------YYEYKFQVCVGSPTTLRAAF------------------------------MGDSGGPLLCAG---  190 (224)
T ss_dssp             CGGGTTTTT------CCCTTTEEEECCTTSCCBCC------------------------------TTTTTCEEEETT---
T ss_pred             ChHHhcccc------ccCcCCEEEecCCCCCCeec------------------------------cCCCCCeEEEcc---
Confidence            999998722      24578999999877778889                              999999999954   


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                       +|+||+|||..|...  |++||||+.|++||+++|+
T Consensus       191 -~l~Gi~S~g~~c~~~--p~vyt~v~~y~~WI~~~i~  224 (224)
T 3rp2_A          191 -VAHGIVSYGHPDAKP--PAIFTRVSTYVPWINAVIN  224 (224)
T ss_dssp             -EEEEEEEECCTTCCS--CEEEEEHHHHHHHHHHHHC
T ss_pred             -eeeEEEEECCCCCCC--CcEEEEHHHhHHHHHHHhC
Confidence             799999999998754  9999999999999999885

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=100.00  E-value=2.7e-48  Score=346.81  Aligned_cols=224  Identities=30%  Similarity=0.594  Sum_probs=192.4

Q ss_pred             EecceecCCCCcceEEEEccC--CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC---CceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR---PSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~---~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|+|+..  +.++|+||||+++||||||||+..        .+.|++|......   .....+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~--------~~~v~~g~~~~~~~~~~~~~~~~~~   72 (238)
T 4e7n_A            1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCDRK--------NFRIKLGMHSKKVPNEDEQTRVPKE   72 (238)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTTCCEEEEEEECSSSEEEECGGGCCS--------SCEEEESCSCSSSCCTTCEEECEEE
T ss_pred             CCCCeeCCCCCcCcEEEEEECCCCCEEEEEEEecCCEEEEhHHcCCC--------CCeEEeceeeccccCCCceeEeeee
Confidence            689999999999999999876  678999999999999999999853        4578888776642   233445677


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeech
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN  271 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~  271 (388)
                      .++.||.|+.....||||||+|++|+.+++.++|||||.... ..+..++++|||.+.....  ..+..|++..+++++.
T Consensus        73 ~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~~~~--~~~~~l~~~~~~~~~~  149 (238)
T 4e7n_A           73 KFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSPP-SVGSVCRIMGWGRISPTEG--TYPDVPHCVNINLLEY  149 (238)
T ss_dssp             EECSSTTCCCCSSSCCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCSSSSSC--CCCSSCEEEEEEEECG
T ss_pred             eEEcCCCCCCCCCCCcEEEEEeCCCccCCCceeeeeCCCCCC-CCCCEEEEEECCCCCCCCC--CCCccceEeeccccCH
Confidence            777899999999999999999999999999999999998776 5689999999999875432  2377899999999999


Q ss_pred             hhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       272 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      ++|+..+...  ...+.+.|||++...+..+.|                              +|||||||++..    .
T Consensus       150 ~~C~~~~~~~--~~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----~  193 (238)
T 4e7n_A          150 EMCRAPYPEF--ELPATSRTLCAGILEGGKDTC------------------------------KGDSGGPLICNG----Q  193 (238)
T ss_dssp             GGGTTTCGGG--CCCSCCSEEEEECTTCSCBCC------------------------------TTCTTCEEEETT----E
T ss_pred             HHHhhhcccc--cCCCCCCeEEeCCCCCCCccC------------------------------CCCCCcceEECC----E
Confidence            9999887632  235788999999877788999                              999999999965    4


Q ss_pred             EEEEEEecCC-CCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       352 l~Gi~s~g~~-c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+||+|||.. |..++.|++||||+.|++||+++|+.
T Consensus       194 l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~  230 (238)
T 4e7n_A          194 FQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAG  230 (238)
T ss_dssp             EEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTT
T ss_pred             EEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhc
Confidence            9999999986 98888999999999999999999864

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=100.00  E-value=1.2e-48  Score=348.15  Aligned_cols=220  Identities=29%  Similarity=0.582  Sum_probs=190.9

Q ss_pred             EecceecCCCCcceEEEEccC--CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC---CceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR---PSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~---~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|+|+..  +.++|+||||+++||||||||+..        .+.|.+|..+...   .......+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~--------~~~v~~g~~~~~~~~~~~~~~~~~~   72 (234)
T 3s9c_A            1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRR--------NIRIKLGMHSKNIRNEDEQIRVPRG   72 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT--------TEEEEESCSSSSSCCTTCEEECEEE
T ss_pred             CCCCeeCCCCCCCeEEEEEECCCCcEEEeeEEeeCCEEEEchhhcCC--------CceEEEeecccccccCCcceEEeee
Confidence            689999999999999999876  578899999999999999999853        4788899876652   233345566


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeech
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN  271 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~  271 (388)
                      .++.||.|+.....||||||+|++|+.|++.++|||||.... ..+..++++|||.+....    .+..|+...+.+++.
T Consensus        73 ~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~L~~~~~-~~~~~~~v~GwG~~~~~~----~~~~l~~~~~~~~~~  147 (234)
T 3s9c_A           73 KYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSR-GVGSRCRIMGWGKISTTT----YPDVPHCTNIFIVKH  147 (234)
T ss_dssp             EECCSSCSSTTCGGGCCEEEEESSCCCCBTTBCCCBCCSSCC-CTTCEEEEEESSCSBTTB----CCSSCEEEEEEEECG
T ss_pred             EEEeCCCCCCCCCcCceEEEEECCccccCCcccccccCCCCC-CCCCeEEEEeeCCCCCCC----CCccccccceEecCH
Confidence            777799999988899999999999999999999999998776 568999999999887652    277899999999999


Q ss_pred             hhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       272 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      ++|+..+..    ..+.+.||||+...++.+.|                              +|||||||++..    .
T Consensus       148 ~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C------------------------------~GDSGgPl~~~~----~  189 (234)
T 3s9c_A          148 KWCEPLYPW----VPADSRTLCAGILKGGRDTC------------------------------HGDSGGPLICNG----E  189 (234)
T ss_dssp             GGTTTTCTT----SCTTSSEEEEECTTSSCBCC------------------------------TTCTTCEEEETT----E
T ss_pred             HHhhhcccC----CCCCcceEEeecCCCCCccC------------------------------CCCCCCeEEEeC----C
Confidence            999987752    35788999999877788999                              999999999965    4


Q ss_pred             EEEEEEecCC-CCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       352 l~Gi~s~g~~-c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+||+|||.. |...+.|++||||+.|++||+++|+.
T Consensus       190 l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~  226 (234)
T 3s9c_A          190 MHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAG  226 (234)
T ss_dssp             EEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred             cEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcC
Confidence            9999999986 99888999999999999999999864

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=100.00  E-value=1.7e-49  Score=398.92  Aligned_cols=239  Identities=37%  Similarity=0.672  Sum_probs=190.4

Q ss_pred             CCCCCccCCCCCeEecceecCCCCcceEEEEccC---CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccC
Q psy13815        104 PCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL  180 (388)
Q Consensus       104 ~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~~---~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~  180 (388)
                      .||..    ...||+||.++.+++|||+|+|+..   ..++|+||||+++||||||||+...   .....+.|++|..+.
T Consensus       379 ~Cg~~----~~~rIvgG~~a~~~~~Pw~v~L~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~---~~~~~~~V~~G~~~~  451 (625)
T 2f83_A          379 ECTTK----IKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGV---ESPKILRVYSGILNQ  451 (625)
T ss_dssp             SSCSC----CCSCCCSSSSCCTTSSTTEEEEEECSSSSEEEEEEEECSSSEEEECGGGGSSC---CCGGGEEEEESCSBG
T ss_pred             ccCCC----CCCceECCEECCCCCCCeEEEEEEecCCCcEEEEEEEECCCEEEEcHHhCCCC---CCCceEEEEEEeccC
Confidence            57764    3579999999999999999999865   4689999999999999999999762   234678899998766


Q ss_pred             CC--CceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCC
Q psy13815        181 SR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRR  257 (388)
Q Consensus       181 ~~--~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~  257 (388)
                      ..  ...+.+.|.++++||+|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+......   
T Consensus       452 ~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~---  528 (625)
T 2f83_A          452 SEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKI---  528 (625)
T ss_dssp             GGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CC---
T ss_pred             CCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcC---
Confidence            42  2345688999999999999888999999999999999999999999976543 46788999999988765433   


Q ss_pred             CccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCc
Q psy13815        258 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD  337 (388)
Q Consensus       258 ~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd  337 (388)
                      +..|+++.+++++.++|+..+..    ..+.+.||||+...++.+.|                              +||
T Consensus       529 s~~L~~~~v~i~~~~~C~~~~~~----~~i~~~~iCag~~~~~~d~C------------------------------~GD  574 (625)
T 2f83_A          529 QNTLQKAKIPLVTNEECQKRYRG----HKITHKMICAGYREGGKDAC------------------------------KGD  574 (625)
T ss_dssp             CSBCBCCEECCCCHHHHHTTCTT----SCCCTTBCCC----------------------------------------CCC
T ss_pred             CcccEEEEEEEcCHHHHHHHhcc----CCCCCCeEEeecCCCCCcCC------------------------------CCC
Confidence            77899999999999999987652    35788999999777778899                              999


Q ss_pred             CCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        338 SGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       338 sGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |||||++..+++|+|+||+|||.+|..++.|+|||||+.|++||+++++
T Consensus       575 SGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~~~~  623 (625)
T 2f83_A          575 SGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ  623 (625)
T ss_dssp             TTCEEEEEETTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHHTC-
T ss_pred             cccceEEEECCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            9999999988999999999999999988899999999999999999885

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=100.00  E-value=2.1e-48  Score=342.74  Aligned_cols=213  Identities=32%  Similarity=0.618  Sum_probs=187.1

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+.+    .....+.|++|..+...  ...+.+.|.+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~   76 (218)
T 2z7f_E            1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVAN----VNVRAVRVVLGAHNLSRREPTRQVFAVQRIF   76 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTT----SCGGGCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCccCcEEEEEeCCCcEEEEEEccCCEEEEcHHhcCC----CCcCcEEEEEeceecCCCCCceEEEEEEEEE
Confidence            689999999999999999988889999999999999999999976    23467889999887653  345778999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      .| +|+.....||||||||++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..++++ .++
T Consensus        77 ~h-~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~-~~~  151 (218)
T 2z7f_E           77 EN-GYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGI---ASVLQELNVTVV-TSL  151 (218)
T ss_dssp             ES-CCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCB---CSBCEEEEEEEE-CTT
T ss_pred             cc-CCCCCCCCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCc---cchheEeeeEEe-hhH
Confidence            99 9998888999999999999999999999999987654 57889999999998765433   778999999999 888


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |..             .|+|++...+..+.|                              +|||||||+++.    +|+
T Consensus       152 C~~-------------~~~Ca~~~~~~~~~C------------------------------~GDSGgPl~~~~----~l~  184 (218)
T 2z7f_E          152 CRR-------------SNVCTLVRGRQAGVC------------------------------FGDSGSPLVCNG----LIH  184 (218)
T ss_dssp             CCT-------------TSEEEECTTSCCBCC------------------------------TTCTTCEEEETT----EEE
T ss_pred             cCc-------------ceeeeccCCCCCeeC------------------------------CCcCCCceEEcc----EEE
Confidence            964             299998876678889                              999999999954    799


Q ss_pred             EEEEe--cCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        354 GLVST--GIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       354 Gi~s~--g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ||+||  |. |...+.|++||||+.|++||+++|+
T Consensus       185 Gi~S~~~g~-C~~~~~p~vyt~V~~~~~WI~~~~~  218 (218)
T 2z7f_E          185 GIASFVRGG-CASGLYPDAFAPVAQFVNWIDSIIQ  218 (218)
T ss_dssp             EEEEEESSS-TTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             EEEEeCCcc-CCCCCCCeEEEEHHHhHHHHHHHhC
Confidence            99999  66 9887889999999999999999874

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=100.00  E-value=4.6e-48  Score=342.31  Aligned_cols=214  Identities=29%  Similarity=0.532  Sum_probs=186.1

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCc---eeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPS---ISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~---~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|+..+.++|+||||+++||||||||+.+    .....+.|++|.++.....   .+.+.|.++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~----~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i   76 (225)
T 1a7s_A            1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQS----QNPGVSTVVLGAYDLRRRERQSRQTFSISSM   76 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGC--------CCSEEEEESCSSTTSCCTTTCEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEecCCCcEEEEEEeeCCEEEEchhccCC----CCCCceEEEEeeeECCCCCCcceeEEeEEEE
Confidence            689999999999999999988889999999999999999999976    3346789999988775332   267899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      +.| +|+.....||||||+|++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..+++++.+
T Consensus        77 ~~h-~y~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~l~~~~~~~~~~~  152 (225)
T 1a7s_A           77 SEN-GYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRL---SRFPRFVNVTVTPED  152 (225)
T ss_dssp             ECS-SCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCC---CSSCEEEEEEECCGG
T ss_pred             ecc-cccCCCCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCc---ccccceeeeEECCHH
Confidence            999 9998888999999999999999999999999987654 57889999999998765433   788999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      +|+.             +|+|++...+..+.|                              +|||||||++.+    +|
T Consensus       153 ~C~~-------------~~~Ca~~~~~~~~~C------------------------------~GDSGgPl~~~g----~l  185 (225)
T 1a7s_A          153 QCRP-------------NNVCTGVLTRRGGIC------------------------------NGDGGTPLVCEG----LA  185 (225)
T ss_dssp             GSCT-------------TEEEEECSSSSCBCC------------------------------TTCTTCEEEETT----EE
T ss_pred             Hhcc-------------CceEEeccCCCCCcc------------------------------cCCCcchheeCC----EE
Confidence            9964             799999876678899                              999999999973    89


Q ss_pred             EEEEEec-CCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        353 IGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       353 ~Gi~s~g-~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +||+||| ..|...  |++||||+.|++||+++++.
T Consensus       186 ~Gi~S~g~~~C~~~--p~vyt~V~~~~~WI~~~~~~  219 (225)
T 1a7s_A          186 HGVASFSLGPCGRG--PDFFTRVALFRDWIDGVLNN  219 (225)
T ss_dssp             EEEEEEECSSTTSS--CEEEEEGGGGHHHHHHHHHS
T ss_pred             EEEEEEccCCcCCC--CcEEEEhHHhHHHHHHHhcC
Confidence            9999999 689764  99999999999999999864

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=100.00  E-value=3.5e-48  Score=344.23  Aligned_cols=219  Identities=34%  Similarity=0.624  Sum_probs=189.1

Q ss_pred             EecceecCCCCcceEEEEcc----CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKR----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLR  192 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~----~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~  192 (388)
                      |+||.++.+++|||+|+|+.    .+.++|+||||+++||||||||+.+      ...+.|++|........ +.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~------~~~~~v~~G~~~~~~~~-~~~~v~~   73 (230)
T 2hlc_A            1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD------AVSVVVYLGSAVQYEGE-AVVNSER   73 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTT------EEEEEEEESCSBTTCCS-EEEECSE
T ss_pred             CCCCeECCCCCCCcEEEEEEEecCCCCEEEEEEEeeCCEEEECHHHCCC------CcceEEEEeeeecCCCC-eEEEEEE
Confidence            68999999999999999976    4578999999999999999999965      45788999988776543 7789999


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC---CCCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL---DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~---~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      ++.||+|+.....||||||||+ ++.|++.++|||||....   ...+..++++|||.+...      ...|++..++++
T Consensus        74 i~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~------~~~l~~~~~~~~  146 (230)
T 2hlc_A           74 IISHSMFNPDTYLNDVALIKIP-HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTD------TVILQYTYNLVI  146 (230)
T ss_dssp             EEECTTCBTTTTBTCCEEEECS-CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSC------CCBCEEEEEEEE
T ss_pred             EEECCCCCCCCccccEEEEEec-CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCC------CceeEEEEEEEe
Confidence            9999999998899999999999 999999999999998653   256788999999987653      357999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|+..+..    ..+.+.|||++.. .+.+.|                              +|||||||++..  +
T Consensus       147 ~~~~C~~~~~~----~~~~~~~~Ca~~~-~~~~~C------------------------------~GDSGgPl~~~~--~  189 (230)
T 2hlc_A          147 DNDRCAQEYPP----GIIVESTICGDTS-DGKSPC------------------------------FGDSGGPFVLSD--K  189 (230)
T ss_dssp             CHHHHHTTSCT----TSSCTTEEEECCT-TSCBCC------------------------------TTCTTCEEEEGG--G
T ss_pred             CHHHhhhhhCC----CcccCCeEEecCC-CCCCcC------------------------------CCCCCCeeEECc--C
Confidence            99999987642    2478899999863 457888                              999999999976  3


Q ss_pred             cEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        350 TQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       350 ~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ++|+||+||+.  +|. .+.|.+||||+.|++||++++++
T Consensus       190 ~~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~~~  228 (230)
T 2hlc_A          190 NLLIGVVSFVSGAGCE-SGKPVGFSRVTSYMDWIQQNTGI  228 (230)
T ss_dssp             TEEEEEEEECCTTCTT-SCCCEEEEEGGGGHHHHHHHHCC
T ss_pred             CEEEEEEEEeCCCCCC-CCCCCEEEEhHHhHHHHHHhhCc
Confidence            58999999987  784 57899999999999999999875

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=100.00  E-value=2.2e-48  Score=373.39  Aligned_cols=247  Identities=32%  Similarity=0.584  Sum_probs=190.4

Q ss_pred             CCCCCCCccC-CCCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCC-CCccceEEEEecccc
Q psy13815        102 GVPCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS-PLSASQINVTLKEHD  179 (388)
Q Consensus       102 ~~~cg~~~~~-~~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~-~~~~~~~~v~~g~~~  179 (388)
                      .+.||..... ....||+||.++.+++|||+|.|...  ..|+||||+++||||||||+..... ......+.|++|..+
T Consensus       142 ~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~--~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~  219 (399)
T 1gpz_A          142 LPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTN  219 (399)
T ss_dssp             EECCSCCSSCCCSSCCCCSCEECCTTSSTTEEEEESS--SEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEESCSB
T ss_pred             cCCCCCcCCcccCCCEEECCEECCCCCCCCEEEECCC--CCeEEEEeCCCEEEeChhcccccccccCCcceEEEEecccc
Confidence            3469976422 23579999999999999999998653  4799999999999999999975321 112345689999876


Q ss_pred             CCCC-ceeeeceEEEEECCCCCCC---CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCC
Q psy13815        180 LSRP-SISTVPVLRIMFHPSHSCS---SFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQ  254 (388)
Q Consensus       180 ~~~~-~~~~~~v~~i~~hp~y~~~---~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~  254 (388)
                      .... ..+.+.|+++++||+|+..   ...||||||||++|+.|+++++|||||..... ..+..++++|||.+...   
T Consensus       220 ~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~---  296 (399)
T 1gpz_A          220 VEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK---  296 (399)
T ss_dssp             HHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC--------
T ss_pred             ccccccccccceEEEEECCCCCcCCCCCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCc---
Confidence            5311 1235789999999999753   56799999999999999999999999986643 46788999999987642   


Q ss_pred             CCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCC
Q psy13815        255 GRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPL  334 (388)
Q Consensus       255 ~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (388)
                        .+..|+++.+++++.++|+..+........++++||||+...+..+.|                              
T Consensus       297 --~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C------------------------------  344 (399)
T 1gpz_A          297 --IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC------------------------------  344 (399)
T ss_dssp             --CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECGGGGGGGG------------------------------
T ss_pred             --cCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccCCCCCccC------------------------------
Confidence              267899999999999999987653211224688999999766678999                              


Q ss_pred             CCcCCCceEEec--CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        335 QADSGGPLMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       335 ~gdsGgPL~~~~--~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|||||||++..  +++|+|+||+|||.+|+.  .|+|||||+.|++||+++|+.
T Consensus       345 ~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~--~~~vyt~V~~y~~WI~~~~~~  397 (399)
T 1gpz_A          345 QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVDWIKKEMEE  397 (399)
T ss_dssp             CSCSSCEEEEEETTTTEEEEEEEECCCTTTTT--TEEEEEEGGGGHHHHHHHTC-
T ss_pred             CCCCchHeEEEECCCCeEEEEEEEEeCCCcCC--CCeEEEEhHHhHHHHHHHhcc
Confidence            999999999964  578999999999999985  489999999999999999874

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=100.00  E-value=1.3e-47  Score=340.10  Aligned_cols=220  Identities=25%  Similarity=0.459  Sum_probs=191.6

Q ss_pred             cceecCCCCcceEEEEccCCc--e-eEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC-CCceeeeceEEEE
Q psy13815        119 GGLAANPGEFPWIVSLKRHGG--H-FCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS-RPSISTVPVLRIM  194 (388)
Q Consensus       119 ~g~~~~~~~~Pw~v~i~~~~~--~-~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~-~~~~~~~~v~~i~  194 (388)
                      ||.++.+++|||+|+|...+.  + +|+||||+++||||||||+.+    .....+.|++|..+.. ....+.+.|.+++
T Consensus         2 gG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~----~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~   77 (228)
T 3h7o_A            2 GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFD----QKPETIVIQYESTNLWEDPGKSDPYVSHVY   77 (228)
T ss_dssp             CCEECCGGGSTTEEEEEECGGGCCEEEEEEESSSSEEEECHHHHTT----SCGGGCEEEESCSBTTTBCCEEECCEEEEE
T ss_pred             CCccCCcCCCCeEEEEeecCCCCceEeeeEEeeCCEEEEcHHhccc----CCCCcEEEEecccccccCCCceeeeEEEEE
Confidence            789999999999999987543  4 999999999999999999975    3456788999988775 2344778899999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCC-CeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSD-LIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~-~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      .| +|+.....||||||+|++|+.+++ .++|||||..... ..+..++++|||.+......   +..|++..+++++.+
T Consensus        78 ~h-~y~~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~---~~~L~~~~~~~~~~~  153 (228)
T 3h7o_A           78 LS-FYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPK---DHDLKSAQLTVVDLD  153 (228)
T ss_dssp             ES-SCBTTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGG---GGBCEEEEEEEECHH
T ss_pred             cc-ccCCCCccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCCCc---ccccccceeEEEcHH
Confidence            99 999988999999999999999998 9999999987743 67889999999998765432   778999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      +|+..+..    ..+.+.||||+...  .+.|                              +|||||||++..    .|
T Consensus       154 ~C~~~~~~----~~~~~~~~Ca~~~~--~~~C------------------------------~GDsGgPl~~~~----~l  193 (228)
T 3h7o_A          154 ECRTKYGP----IFLSLQVFCAQKVG--VSLE------------------------------SGDAGDPTVQQD----TL  193 (228)
T ss_dssp             HHHHHHTT----SCCCSSEEEEECTT--CCCC------------------------------GGGTTCEEEETT----EE
T ss_pred             HHHHHhcC----ccCCceEEecCCCC--CcCC------------------------------CCCCCCcceecC----eE
Confidence            99998862    35788999998653  7888                              999999999954    49


Q ss_pred             EEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       353 ~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +||+||+..|.. +.|++||+|+.|++||+++|+.
T Consensus       194 ~Gi~S~g~~c~~-~~p~vyt~v~~~~~WI~~~i~~  227 (228)
T 3h7o_A          194 VGVAAYFPKRPE-GAPEVFTKVGSYVSWIQDIIKK  227 (228)
T ss_dssp             EEEECCCTTCCT-TCCEEEEEGGGTHHHHHHHHTT
T ss_pred             EEEEeecCcCCC-CCCcEEEEHHHHHHHHHHHhhc
Confidence            999999999987 8899999999999999999975

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=100.00  E-value=1e-46  Score=332.80  Aligned_cols=214  Identities=32%  Similarity=0.632  Sum_probs=185.1

Q ss_pred             EecceecCCCCcceEEEEccC---CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~---~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|+|...   +.++|+||||+++||||||||+.+    .....+.|++|..+...  ...+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~~~~~~~~~~~v~   76 (221)
T 1fuj_A            1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRD----IPQRLVNVVLGAHNVRTQEPTQQHFSVA   76 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTBTTCCCEEEEEEETTEEEECGGGGSS----SCGGGEEEEESCSBTTSCCTTCEEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEEecCCCCEEEEEEEecCCEEEEchHhcCc----CCCCceEEEEeeeeccCCCCceEEEEEE
Confidence            689999999999999999764   368999999999999999999976    33467899999887653  346788999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.| +|+.....||||||+|++|+.|++.++|||||..... ..+..++++|||.+......   +..|++..++++ 
T Consensus        77 ~i~~h-~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~---~~~l~~~~~~~~-  151 (221)
T 1fuj_A           77 QVFLN-NYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPP---AQVLQELNVTVV-  151 (221)
T ss_dssp             EEEEC-CCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCB---CSBCEEEEEEEE-
T ss_pred             EEEeC-CCCCCCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCH---HHHhhcccceEE-
Confidence            99999 9998888999999999999999999999999987654 57889999999998765433   778999999999 


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      ..+|..             .|+|++...+..+.|                              .|||||||+++.    
T Consensus       152 ~~~C~~-------------~~~Ca~~~~~~~~~C------------------------------~GDSGgPL~~~~----  184 (221)
T 1fuj_A          152 TFFCRP-------------HNICTFVPRRKAGIC------------------------------FGDSGGPLICDG----  184 (221)
T ss_dssp             CTTCCT-------------TEEEEECSSSSCBCC------------------------------TTCTTCEEEETT----
T ss_pred             eeecCC-------------ceeeeccCCCCCCCC------------------------------CCCCCCeeEECC----
Confidence            888853             399998876678889                              999999999943    


Q ss_pred             EEEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        351 QVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       351 ~l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +|+||+||+. +|...+.|++||||+.|++||+++|+
T Consensus       185 ~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i~  221 (221)
T 1fuj_A          185 IIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR  221 (221)
T ss_dssp             EEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             EEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHhC
Confidence            7999999954 59887889999999999999999885

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=100.00  E-value=5.8e-48  Score=383.57  Aligned_cols=242  Identities=35%  Similarity=0.628  Sum_probs=159.2

Q ss_pred             CCCCCCCccC-CCCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccC
Q psy13815        102 GVPCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL  180 (388)
Q Consensus       102 ~~~cg~~~~~-~~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~  180 (388)
                      ...||..... ....||+||.++.+++|||+|+|+..+.++|+||||+++||||||||+..    .....+.|++|.++.
T Consensus       306 ~~~CG~~~~~~~~~~rIvgG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~----~~~~~~~V~~G~~~~  381 (565)
T 2xrc_A          306 KLSCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRA----SKTHRYQIWTTVVDW  381 (565)
T ss_dssp             CCCCCC--------------------CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHTT----CSSCCEEEEC-----
T ss_pred             ccccCCCCCcccCCCceECCEECCCCCCCcEEEEecCCceeeeEEEEeCCEEEEChhhccc----CCCcceEEEEEEeec
Confidence            3479876532 24579999999999999999999987788999999999999999999976    234568899998776


Q ss_pred             CC---CceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCC----CeeeeeCCCCCCC-CCCCeEEEEEccccCCCC
Q psy13815        181 SR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSD----LIRPACLPSGSLD-YSEQSVTVAGWGWTNENP  252 (388)
Q Consensus       181 ~~---~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~----~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~  252 (388)
                      ..   ...+.+.|+++++||+|+...+.||||||+|++|+.+++    .++|||||..... ..+..++++|||.+....
T Consensus       382 ~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~  461 (565)
T 2xrc_A          382 IHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNE  461 (565)
T ss_dssp             --------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC--------
T ss_pred             cCCCCCccEEEEEEEEEeCCCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCC
Confidence            43   245678899999999999999999999999999998764    6899999976543 568899999999887643


Q ss_pred             CCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCC
Q psy13815        253 SQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDP  332 (388)
Q Consensus       253 ~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (388)
                          .+..|+++.+++++  .|+..+..    ......||||+...+..+.|                            
T Consensus       462 ----~~~~L~~~~v~i~~--~C~~~~~~----~~~~~~~iCAg~~~g~~d~C----------------------------  503 (565)
T 2xrc_A          462 ----RVFSLQWGEVKLIS--NCSKFYGN----RFYEKEMECAGTYDGSIDAC----------------------------  503 (565)
T ss_dssp             ---------CEEEEEECS--CTHHHHTT----SCCTTTEEEEEEC-----------------------------------
T ss_pred             ----ccceeeEEeeeehH--HhHHhhcc----CcCCCceEEeCCCCCCCccC----------------------------
Confidence                26789999999997  49988752    13345599999877778899                            


Q ss_pred             CCCCcCCCceEEec-CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        333 PLQADSGGPLMLLG-AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       333 ~~~gdsGgPL~~~~-~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                        +|||||||++.. +++|+|+||+|||.+|+.++.|+|||||+.|++||+++|+.
T Consensus       504 --~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~i~~  557 (565)
T 2xrc_A          504 --KGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHVGR  557 (565)
T ss_dssp             -----CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHHC--
T ss_pred             --CCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHHhcc
Confidence              999999999975 67999999999999999888999999999999999999864

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=100.00  E-value=1.2e-46  Score=383.31  Aligned_cols=240  Identities=38%  Similarity=0.776  Sum_probs=203.7

Q ss_pred             CCCCCCccCC--CCCeEecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEecccc
Q psy13815        103 VPCGRSLASR--RTGKIVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHD  179 (388)
Q Consensus       103 ~~cg~~~~~~--~~~~i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~  179 (388)
                      ..||......  ...||+||.++.+++|||+|+|+.. +.++|+||||+++||||||||+...   .....+.|++|.++
T Consensus       546 ~~CG~~~~~~~~~~~RIvGG~~a~~~~~PW~VsL~~~~~~~~CGGSLIs~~wVLTAAHCv~~~---~~~~~~~V~lG~~~  622 (791)
T 4dur_A          546 FDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKS---PRPSSYKVILGAHQ  622 (791)
T ss_dssp             CCTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGSSC---CCGGGCEEEESCCB
T ss_pred             cCcCCcccccccCCCceECCEECCCCCCCeEEEEEecCCCeEEEEEEEeCCEEEECHHHcCCc---CCCceEEEEecccc
Confidence            3688765432  2479999999999999999999864 6789999999999999999999752   23467889999877


Q ss_pred             CC--CCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCC
Q psy13815        180 LS--RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGR  256 (388)
Q Consensus       180 ~~--~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~  256 (388)
                      ..  ....+.+.|.+++.||.      .||||||+|++|+.|++.|+|||||..... ..+..++++|||.+....    
T Consensus       623 ~~~~~~~~q~~~V~~i~~hp~------~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~----  692 (791)
T 4dur_A          623 EVNLEPHVQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTF----  692 (791)
T ss_dssp             SSSCCTTCEEEEEEEEEECTT------CCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---C----
T ss_pred             ccCCCCccEEEEEEEEECCCC------CCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCC----
Confidence            64  34567889999999997      479999999999999999999999987654 567899999999886432    


Q ss_pred             CCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCC
Q psy13815        257 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA  336 (388)
Q Consensus       257 ~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  336 (388)
                      .+..|+++.+++++.++|.....   ....+.++||||+...++.+.|                              +|
T Consensus       693 ~s~~L~~~~v~ii~~~~C~~~~~---~~~~i~~~~iCAg~~~gg~daC------------------------------~G  739 (791)
T 4dur_A          693 GAGLLKEAQLPVIENKVCNRYEF---LNGRVQSTELCAGHLAGGTDSC------------------------------QG  739 (791)
T ss_dssp             CTTBCEEEEEEEECHHHHTSTTT---TTTCCCTTEEEESCSSSCCCBC------------------------------CS
T ss_pred             CCCeeEEEEEEEeCHHHhhcccc---cCCCCCCCeEEeccCCCCCCCC------------------------------CC
Confidence            26789999999999999987532   1235789999999877788999                              99


Q ss_pred             cCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        337 DSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       337 dsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      ||||||++..+++|+|+||+|||.+|..++.|+|||+|+.|++||+++|+.+
T Consensus       740 DSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i~~N  791 (791)
T 4dur_A          740 DSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRNN  791 (791)
T ss_dssp             CTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHHHHC
T ss_pred             CcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999998899999999999999999999754

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=100.00  E-value=5.9e-47  Score=352.24  Aligned_cols=216  Identities=23%  Similarity=0.366  Sum_probs=187.4

Q ss_pred             ceecCCCCcceEEEEcc-CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCC
Q psy13815        120 GLAANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS  198 (388)
Q Consensus       120 g~~~~~~~~Pw~v~i~~-~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~  198 (388)
                      |.++..++|||+|+|+. .+.++|+||||+++||||||||+.+      ...+.|++|...... ..+.+.|.++++||+
T Consensus        97 G~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~------~~~~~V~~G~~~~~~-~~~~~~v~~i~~Hp~  169 (317)
T 3h5c_B           97 KRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLL------HRNITVKTYFNRTSQ-DPLMIKITHVHVHMR  169 (317)
T ss_dssp             CSSCCTTCCTTEEEEECSSSCEEEEEEEEETTEEEECHHHHHS------CSSCEEEECTTSCTT-SCEEEEEEEEEECTT
T ss_pred             cccCccCCCCcEEEEeccCCceeeeeEEeeCCEEEEChHhcCc------CCceEEEEeeecCCC-CcEEEEeeEEEECCC
Confidence            88899999999999986 5688999999999999999999955      346789999876644 557789999999999


Q ss_pred             CCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCC----CCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        199 HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS----LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       199 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~----~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      |+.....||||||||++|+.|++.++|||||...    ....+..++++|||..  ..   ..+..|+++.+++++.++|
T Consensus       170 y~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~--~~---~~~~~L~~~~v~~~~~~~C  244 (317)
T 3h5c_B          170 YDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARN--GT---DLGNSLTTRPVTLVEGEEC  244 (317)
T ss_dssp             CBTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTT--CC---SSSCCCBCCEEEEECHHHH
T ss_pred             CCCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCC--CC---CCCccceEEEEEEECHHHH
Confidence            9998899999999999999999999999999865    2256889999999982  22   2377899999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+..     .+.++||||+...   ..|                              .|||||||++..+++|+|+|
T Consensus       245 ~~~~~~-----~~~~~~~Ca~~~~---~~~------------------------------~gDsGgPl~~~~~~~~~l~G  286 (317)
T 3h5c_B          245 GQVLNV-----TVTTRTYCERSSV---AAM------------------------------HWMDGSVVTREHRGSWFLTG  286 (317)
T ss_dssp             HHHHTC-----CCCTTEEEEECSC---CCC------------------------------CCCTTCEEEEEETTEEEEEE
T ss_pred             hhhhcC-----cCCCceeECCCCC---CCc------------------------------CCCCCCCEEEecCCEEEEEE
Confidence            998752     5789999997542   356                              89999999999999999999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+||+. |..++.|+|||||+.|++||+++|+
T Consensus       287 i~S~g~-~~~~~~p~vyt~V~~y~~WI~~~i~  317 (317)
T 3h5c_B          287 VLGSQP-VGGQAHMVLVTKVSRYSLWFKQIMN  317 (317)
T ss_dssp             EECCCC-SSCCTTEEEEEEGGGCHHHHHHHHC
T ss_pred             EEEECC-CCCCCcceEEEEhHHhHHHHHHHhC
Confidence            999985 6667899999999999999999875

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=100.00  E-value=2.3e-43  Score=349.12  Aligned_cols=243  Identities=23%  Similarity=0.400  Sum_probs=182.0

Q ss_pred             CCCCCCCCccCCCCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccC
Q psy13815        101 AGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL  180 (388)
Q Consensus       101 ~~~~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~  180 (388)
                      ....||...        ++|.++.+++|||+|+|...+.++|+||||+++||||||||+...   .....+.|++|.++.
T Consensus       216 ~~~~CG~~~--------~~g~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~---~~~~~~~V~~G~~~~  284 (509)
T 2odp_A          216 TDTICGVGN--------MSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDG---NDHSLWRVNVGDPKS  284 (509)
T ss_dssp             CSCCSSCCC--------CCTTSCHHHHCTTEEEEEC----CEEEEECSSSEEEECGGGC-----------CEEEECCTTC
T ss_pred             CCcccCCcC--------CCCCccccCCCCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcCCC---CCcceEEEEeCCccc
Confidence            345798764        467889999999999998877889999999999999999999752   234567899998764


Q ss_pred             CCCceeeeceEEEEECCCCCCC---------CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC------CCCCCeEEEEEc
Q psy13815        181 SRPSISTVPVLRIMFHPSHSCS---------SFNNDIALLELTRSIQWSDLIRPACLPSGSL------DYSEQSVTVAGW  245 (388)
Q Consensus       181 ~~~~~~~~~v~~i~~hp~y~~~---------~~~~DIALl~L~~~v~~~~~v~picLp~~~~------~~~~~~~~~~Gw  245 (388)
                      .  ..+.+.|+++++||+|+..         ...||||||+|++|+.|+++++|||||....      ...+..|++.||
T Consensus       285 ~--~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~  362 (509)
T 2odp_A          285 Q--WGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHEN  362 (509)
T ss_dssp             T--TCEEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHH
T ss_pred             C--CCceeeeEEEEECCCCccccccccccccccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccc
Confidence            3  3467899999999999874         5789999999999999999999999996531      145777888899


Q ss_pred             cccCCCCCCCC-CCccceEEEEEee---chhhhhhHhhcC----C----CccccCCCeEEeccCCCCcCcccCCcccCCc
Q psy13815        246 GWTNENPSQGR-RSNILQKVALSVV---SNQVCQAWYQSE----G----KKINVKESQMCAGHEQGGKDACWVSRQWWTP  313 (388)
Q Consensus       246 G~~~~~~~~~~-~~~~l~~~~~~i~---~~~~C~~~~~~~----~----~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~  313 (388)
                      |.......... .....++..+.++   +.++|...+...    .    ....+.++||||+. .++.+.|         
T Consensus       363 g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~-~~~~~~C---------  432 (509)
T 2odp_A          363 ELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGT-QEDESPC---------  432 (509)
T ss_dssp             HHSCSSEEEEEEECTTSCEEEEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECC-TTCCCCC---------
T ss_pred             cccccccceeeeecccCceeeEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCC-CCCCccc---------
Confidence            97654211000 0011245566664   689999864211    0    12357899999986 4567899         


Q ss_pred             ccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecC--CCC---------CCCCC------eEEEeCCC
Q psy13815        314 HVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI--GCA---------RPRLP------GLYTRLTR  376 (388)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~--~c~---------~~~~p------~v~t~V~~  376 (388)
                                           +|||||||++..+++|+|+||+|||.  +|+         .+..|      ++||||+.
T Consensus       433 ---------------------~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~  491 (509)
T 2odp_A          433 ---------------------KGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFR  491 (509)
T ss_dssp             ---------------------GGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCCCCCTTCSSCCCEEEEEGGG
T ss_pred             ---------------------CCCccCceEEEECCeEEEEEEEEEcCCCCCCCcccccccccCcccCCCCCCceeeeHHH
Confidence                                 99999999999999999999999997  696         34555      59999999


Q ss_pred             chhHHhhhhcc
Q psy13815        377 YIGWISDTLDI  387 (388)
Q Consensus       377 ~~~WI~~~i~~  387 (388)
                      |++||+++++.
T Consensus       492 ~~~WI~~~~~~  502 (509)
T 2odp_A          492 MQPWLRQHLGD  502 (509)
T ss_dssp             CHHHHHHHHTT
T ss_pred             HhHHHHHHhCC
Confidence            99999999864

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=100.00  E-value=6.2e-43  Score=345.16  Aligned_cols=238  Identities=21%  Similarity=0.409  Sum_probs=184.6

Q ss_pred             CCCCCCccCCCCCeEecceecCCCCcceEEEEcc----CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccc
Q psy13815        103 VPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKR----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH  178 (388)
Q Consensus       103 ~~cg~~~~~~~~~~i~~g~~~~~~~~Pw~v~i~~----~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~  178 (388)
                      ..||....        .+..+.+++|||+|+|+.    .+.++|+||||+++||||||||+...   .....+.|++|..
T Consensus       209 ~~CG~~~~--------~~~~~~~~~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~  277 (497)
T 1rrk_A          209 SLCGMVWE--------HRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVD---DKEHSIKVSVGGE  277 (497)
T ss_dssp             TCTTCCCC--------CTTCCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTT---CCGGGEEEEETTC
T ss_pred             CCCCCCCC--------CCCCCCccccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCCCC---CCceEEEEEeCCc
Confidence            46997652        134567889999999975    24689999999999999999999752   2346788999864


Q ss_pred             cCCCCceeeeceEEEEECCCCCCC---------CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC------CCCCCeEEEE
Q psy13815        179 DLSRPSISTVPVLRIMFHPSHSCS---------SFNNDIALLELTRSIQWSDLIRPACLPSGSL------DYSEQSVTVA  243 (388)
Q Consensus       179 ~~~~~~~~~~~v~~i~~hp~y~~~---------~~~~DIALl~L~~~v~~~~~v~picLp~~~~------~~~~~~~~~~  243 (388)
                            .+.+.|.++++||+|+..         ...||||||+|++|+.|+++++|||||....      ...+..|++.
T Consensus       278 ------~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~  351 (497)
T 1rrk_A          278 ------KRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQ  351 (497)
T ss_dssp             ------SSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHH
T ss_pred             ------cceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcc
Confidence                  356889999999999864         5689999999999999999999999997531      2457778888


Q ss_pred             EccccCCCCC----CCCCCccceEEEEEeec---hhhhhhHhhc---CC----CccccCCCeEEeccCCC--CcCcccCC
Q psy13815        244 GWGWTNENPS----QGRRSNILQKVALSVVS---NQVCQAWYQS---EG----KKINVKESQMCAGHEQG--GKDACWVS  307 (388)
Q Consensus       244 GwG~~~~~~~----~~~~~~~l~~~~~~i~~---~~~C~~~~~~---~~----~~~~~~~~~~Ca~~~~~--~~~~C~~~  307 (388)
                      |||.......    ....+..|++..+++++   .++|+..+..   +.    ....+.++||||+...+  +.+.|   
T Consensus       352 g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C---  428 (497)
T 1rrk_A          352 KEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTC---  428 (497)
T ss_dssp             HHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCC---
T ss_pred             cccccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCC---
Confidence            9987643210    00125679999999998   6899875321   00    01247899999987543  46889   


Q ss_pred             cccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecC--CCC----CCCCCe----EEEeCCCc
Q psy13815        308 RQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI--GCA----RPRLPG----LYTRLTRY  377 (388)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~--~c~----~~~~p~----v~t~V~~~  377 (388)
                                                 +|||||||++..+++|+|+||+|||.  +|+    ..+.|.    |||+|+.|
T Consensus       429 ---------------------------~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~~~  481 (497)
T 1rrk_A          429 ---------------------------RGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQV  481 (497)
T ss_dssp             ---------------------------GGGTTCEEEEEETTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGGGG
T ss_pred             ---------------------------CCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHHHH
Confidence                                       99999999999989999999999998  698    456785    99999999


Q ss_pred             hhHHhhhhcc
Q psy13815        378 IGWISDTLDI  387 (388)
Q Consensus       378 ~~WI~~~i~~  387 (388)
                      ++||+++++.
T Consensus       482 ~~WI~~~~~~  491 (497)
T 1rrk_A          482 LPWLKEKLQD  491 (497)
T ss_dssp             HHHHHHHTTT
T ss_pred             HHHHHHHhCc
Confidence            9999999864

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=100.00  E-value=1.7e-40  Score=343.04  Aligned_cols=230  Identities=20%  Similarity=0.398  Sum_probs=178.1

Q ss_pred             cceecCCCCcceEEEEccC----CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEE
Q psy13815        119 GGLAANPGEFPWIVSLKRH----GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIM  194 (388)
Q Consensus       119 ~g~~~~~~~~Pw~v~i~~~----~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~  194 (388)
                      .+.++.+++|||+|.|...    +.++|+||||+++||||||||+...   .....+.|++|...      +.+.|.+++
T Consensus       459 ~~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~---~~~~~~~V~~G~~~------~~~~v~~i~  529 (741)
T 3hrz_D          459 HRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVD---DKEHSIKVSVGGEK------RDLEIEVVL  529 (741)
T ss_dssp             C---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC--------CCEEEEETTCS------CCEEEEEEE
T ss_pred             cCCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhcccc---CCcceEEEEeCCCc------eEEEEEEEE
Confidence            4788999999998887652    4689999999999999999999752   33567889998643      568899999


Q ss_pred             ECCCCCCCC---------CCCcEEEEEeCCCCCCCCCeeeeeCCCCCC------CCCCCeEEEEEccccCCCCCC----C
Q psy13815        195 FHPSHSCSS---------FNNDIALLELTRSIQWSDLIRPACLPSGSL------DYSEQSVTVAGWGWTNENPSQ----G  255 (388)
Q Consensus       195 ~hp~y~~~~---------~~~DIALl~L~~~v~~~~~v~picLp~~~~------~~~~~~~~~~GwG~~~~~~~~----~  255 (388)
                      +||+|+...         +.||||||+|++|+.|++.++|||||....      ...+..|.+.|||.+......    .
T Consensus       530 ~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~  609 (741)
T 3hrz_D          530 FHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVS  609 (741)
T ss_dssp             ECTTCCTTTTGGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEE
T ss_pred             ECCCCCcccccccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceecc
Confidence            999998653         689999999999999999999999995431      256778899999987654210    0


Q ss_pred             CCCccceEEEEEeec---hhhhhhHhhcCC-------CccccCCCeEEeccCCC--CcCcccCCcccCCcccccccccCC
Q psy13815        256 RRSNILQKVALSVVS---NQVCQAWYQSEG-------KKINVKESQMCAGHEQG--GKDACWVSRQWWTPHVARGRVYPS  323 (388)
Q Consensus       256 ~~~~~l~~~~~~i~~---~~~C~~~~~~~~-------~~~~~~~~~~Ca~~~~~--~~~~C~~~~~~~~~~~~~~~~~~~  323 (388)
                      ..+..|++..+.+++   .+.|...+....       ....+.++||||+...+  +.+.|                   
T Consensus       610 ~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C-------------------  670 (741)
T 3hrz_D          610 EEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTC-------------------  670 (741)
T ss_dssp             ESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCC-------------------
T ss_pred             ccccccccceeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcC-------------------
Confidence            125679999999998   889998543211       12368999999987653  57789                   


Q ss_pred             CCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecC--CCCC---CCCC-----eEEEeCCCchhHHhhhhcc
Q psy13815        324 HRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI--GCAR---PRLP-----GLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       324 ~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~--~c~~---~~~p-----~v~t~V~~~~~WI~~~i~~  387 (388)
                                 +|||||||++..+++|+|+||+|||.  +|+.   .+.|     ++||+|+.|++||+++|+.
T Consensus       671 -----------~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~  733 (741)
T 3hrz_D          671 -----------RGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQD  733 (741)
T ss_dssp             -----------GGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTTT
T ss_pred             -----------cCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhcC
Confidence                       99999999999999999999999998  8987   6888     9999999999999999864

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=100.00  E-value=3.9e-40  Score=289.30  Aligned_cols=205  Identities=15%  Similarity=0.217  Sum_probs=162.1

Q ss_pred             CCCeEecceecCCCCcce--EEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeece
Q psy13815        113 RTGKIVGGLAANPGEFPW--IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPV  190 (388)
Q Consensus       113 ~~~~i~~g~~~~~~~~Pw--~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v  190 (388)
                      ...||++|.     ++||  ++.+. .+.++|+||||+++||||||||+.+.........+.|++|..+...... .+.|
T Consensus         7 ~~~rI~~g~-----~~P~~~~~~~~-~~~~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~-~~~v   79 (215)
T 1p3c_A            7 GRTKVANTR-----VAPYNSIAYIT-FGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNG-SANM   79 (215)
T ss_dssp             CCEECSCTT-----STTGGGEEEEE-CSSCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTC-CEEE
T ss_pred             CCEEecCCC-----cCCCeEEEEEE-cCCceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCC-eEEE
Confidence            346788775     4677  55555 4678999999999999999999975211111122389999887765443 7889


Q ss_pred             EEEEECCCCC-CCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHS-CSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~-~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .+++.||+|+ .....||||||||++|  |++.++|+|||.... ..+..++++|||.+....    .+..|++..++++
T Consensus        80 ~~i~~hp~y~~~~~~~~DiAll~L~~~--~~~~v~pi~l~~~~~-~~g~~~~~~Gwg~~~~~~----~~~~l~~~~~~~~  152 (215)
T 1p3c_A           80 TEFYVPSGYINTGASQYDFAVIKTDTN--IGNTVGYRSIRQVTN-LTGTTIKISGYPGDKMRS----TGKVSQWEMSGSV  152 (215)
T ss_dssp             EEEECCHHHHHHCCGGGCCEEEEESSC--HHHHHCCCCBCCCSC-CTTCEEEEEECCHHHHHH----HSSCCCEEEEEEC
T ss_pred             EEEEeCCccccCCCcccCEEEEEECCC--CcccceeeecCCCcc-cCCCeEEEecCCCCCccc----ccceechhccCcc
Confidence            9999999994 4667899999999996  568899999998765 678999999999765421    1567899999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|...+                    ...+.|                              .|||||||++..+  
T Consensus       153 ~~~~c~~~~--------------------~~~~~C------------------------------~GDSGgPl~~~~g--  180 (215)
T 1p3c_A          153 TREDTNLAY--------------------YTIDTF------------------------------SGNSGSAMLDQNQ--  180 (215)
T ss_dssp             CEECSSEEE--------------------ECCCCC------------------------------TTCTTCEEECTTS--
T ss_pred             Ccccchhee--------------------eccccC------------------------------CCCCCCeeEccCC--
Confidence            999886532                    135678                              9999999998532  


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                       +|+||+|||.+|.  ..|.+||+|+.|++||+++++
T Consensus       181 -~lvGi~S~g~~c~--~~p~v~t~v~~~~~WI~~~~~  214 (215)
T 1p3c_A          181 -QIVGVHNAGYSNG--TINGGPKATAAFVEFINYAKA  214 (215)
T ss_dssp             -CEEEECCEEEGGG--TEEEEEBCCHHHHHHHHHHHT
T ss_pred             -eEEEEEecccCCC--ccCceeEechHHHHHHHHHhc
Confidence             7999999999897  679999999999999999875

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=100.00  E-value=4.5e-33  Score=230.31  Aligned_cols=149  Identities=32%  Similarity=0.577  Sum_probs=128.0

Q ss_pred             CCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhh
Q psy13815        200 SCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ  279 (388)
Q Consensus       200 ~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~  279 (388)
                      +...+.||||||||++|+.|+++++|||||.... ..+..++++|||.+.........+..|+++.+++++.++|+..+.
T Consensus         2 d~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~-~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~   80 (152)
T 2pka_B            2 DGKDYSHDLMLLRLQSPAKITDAVKVLELPTQEP-ELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHP   80 (152)
T ss_dssp             CCSBCTTCCEEEEESSCCCCCSSCCCCCCCSSCC-CTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCS
T ss_pred             CCCCCCCCEEEEEECCCCcCCCCEEeEECCCCCC-CCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhc
Confidence            4456789999999999999999999999998765 568899999999987654211237789999999999999998764


Q ss_pred             cCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEec
Q psy13815        280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTG  359 (388)
Q Consensus       280 ~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g  359 (388)
                           ..+.++||||+...+..+.|                              +|||||||++.+    +|+||+|||
T Consensus        81 -----~~~~~~~iCa~~~~~~~~~C------------------------------~GDsGgPL~~~g----~l~Gi~S~g  121 (152)
T 2pka_B           81 -----DKVTESMLCAGYLPGGKDTC------------------------------MGDSGGPLICNG----MWQGITSWG  121 (152)
T ss_dssp             -----SBCCTTEEEEECTTSSCBCC------------------------------TTCTTCEEEETT----EEEEEECCC
T ss_pred             -----CCCCCCEEeeccCCCCCccc------------------------------CCccccceEECC----EEEEEEecC
Confidence                 14688999999766678899                              999999999963    599999999


Q ss_pred             -CCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        360 -IGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       360 -~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                       ..|..++.|+|||||+.|++||+++++.+
T Consensus       122 ~~~C~~~~~p~vyt~V~~y~~WI~~~~~~~  151 (152)
T 2pka_B          122 HTPCGSANKPSIYTKLIFYLDWIDDTITEN  151 (152)
T ss_dssp             CSSTTCTTCCEEEEEGGGGHHHHHHHHHHC
T ss_pred             CCCCCCCCCCeEEEEHHHHHHHHHHHhccC
Confidence             78998889999999999999999998753

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...

Probab=100.00  E-value=8.6e-33  Score=222.80  Aligned_cols=126  Identities=38%  Similarity=0.713  Sum_probs=110.8

Q ss_pred             EecceecCCCCcceEEEEcc-CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~-~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i  193 (388)
                      |+||.++.+++|||+|+|+. .+.++|+||||+++||||||||+..       ..+.|++|..+..  ....+.+.|.++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~-------~~~~v~~G~~~~~~~~~~~~~~~v~~i   73 (131)
T 1yph_C            1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT-------TSDVVVAGEFDQGSSSEKIQKLKIAKV   73 (131)
T ss_dssp             CBTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGCCC-------TTSEEEESCSBTTCSSSCCEEEEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEEeCCCCEEEEEEEeeCCEEEECHHHCCC-------CCeEEEEeEccCCCCCCceEEEEEEEE
Confidence            68999999999999999987 5678999999999999999999864       3457889988765  334577899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccC
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTN  249 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~  249 (388)
                      +.||+|+.....||||||||++|+.|++.++|||||..... ..+..|+++|||.+.
T Consensus        74 ~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~  130 (131)
T 1yph_C           74 FKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTR  130 (131)
T ss_dssp             EECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSC
T ss_pred             EeCCCCCCCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCccC
Confidence            99999999889999999999999999999999999987653 578899999999764

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=99.97  E-value=2.9e-32  Score=238.89  Aligned_cols=184  Identities=16%  Similarity=0.182  Sum_probs=134.2

Q ss_pred             CCCCcceEEEEccC---CceeEEEEEee---CCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECC
Q psy13815        124 NPGEFPWIVSLKRH---GGHFCGGTIIH---EQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHP  197 (388)
Q Consensus       124 ~~~~~Pw~v~i~~~---~~~~C~GtLI~---~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp  197 (388)
                      ++++||||+.|+..   +.++|+||||+   ++||||||||+...........+.|.+|..+..... +.+.|+++++||
T Consensus         2 ~~~~~p~~g~l~~~~~~~~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~-~~~~v~~~~~hp   80 (218)
T 3cp7_A            2 NPADSPHIGKVFFSTNQGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEH-GVWAAEELVTSA   80 (218)
T ss_dssp             -CTTCTTEEEEEEEETTEEEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTT-CCEEEEEEEECH
T ss_pred             CCCCCceEEEEEEEcCCCCeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCc-cEEEEEEEEECc
Confidence            46789999999853   35799999999   999999999996521111134678888877654332 367899999999


Q ss_pred             CCCC-CCCCCcEEEEEeCCC--CCCCCCee-eeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        198 SHSC-SSFNNDIALLELTRS--IQWSDLIR-PACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       198 ~y~~-~~~~~DIALl~L~~~--v~~~~~v~-picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      +|+. ....||||||||++|  +.|++.++ |++|+...  ..+..++++|||.+....     ...|          .+
T Consensus        81 ~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~~--~~g~~~~v~GwG~~~~~~-----~~~l----------~~  143 (218)
T 3cp7_A           81 EWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQ--PRGQYYSAYGYPAAAPFN-----GQEL----------HS  143 (218)
T ss_dssp             HHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCSC--CSSCEEEEEECCCSTTCC-----SSSC----------EE
T ss_pred             ccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeecC--CCCCEEEEEeCCCCCCCC-----Ccee----------eE
Confidence            9974 456799999999999  78888899 99998643  467889999999864311     1122          34


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |....... ........|+|+.        |                              .|||||||++..+++++|+
T Consensus       144 C~~~~~~~-~~~~~~~~~~Ca~--------~------------------------------~GDSGGPlv~~~~g~~~lv  184 (218)
T 3cp7_A          144 CHGTATND-PMGSSTQGIPCNM--------T------------------------------GGSSGGPWFLGNGTGGAQN  184 (218)
T ss_dssp             EEEECEEC-TTSSSCEEEECCC--------C------------------------------TTCTTCEEEESSSSSSCEE
T ss_pred             eeeeEEcC-CCCCceEEecCCC--------C------------------------------CCCcCCeeEEccCCCeEEE
Confidence            54321100 0001233789972        5                              8999999999877778999


Q ss_pred             EEEEecCCCCC
Q psy13815        354 GLVSTGIGCAR  364 (388)
Q Consensus       354 Gi~s~g~~c~~  364 (388)
                      ||+|||.+|..
T Consensus       185 GIvS~G~gc~~  195 (218)
T 3cp7_A          185 STNSYGYTFLP  195 (218)
T ss_dssp             EECCEEETTEE
T ss_pred             EEEccccCCCC
Confidence            99999999963

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=99.96  E-value=2.8e-29  Score=226.82  Aligned_cols=193  Identities=11%  Similarity=0.168  Sum_probs=137.8

Q ss_pred             cCCCCcceEE--EEcc---CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECC
Q psy13815        123 ANPGEFPWIV--SLKR---HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHP  197 (388)
Q Consensus       123 ~~~~~~Pw~v--~i~~---~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp  197 (388)
                      +..++|||++  +|..   .+.++|+|+||+++||||||||+....  .....+.|++|..+........+.+.+++.|+
T Consensus        12 ~~~~~~P~~~~v~l~~~~~~g~~~CgG~lI~~~~VLTAAHCv~~~~--~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~   89 (268)
T 1wcz_A           12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATH--GDPHALKAFPSAINQDNYPNGGFTAEQITKYS   89 (268)
T ss_dssp             SCTTSGGGTTEEEEEEEC-CCEEEEEEEECSSSEEEECHHHHGGGT--TCGGGEEEEETCCBTTBCTTCCEEEEEEEECS
T ss_pred             cCCCCCCccEEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCCCcc--CCcceEEEEecccCcccccCCcEEEEEEecCC
Confidence            5567888865  4543   356899999999999999999996521  11345889999776532222246788888885


Q ss_pred             CCCCCCCCCcEEEEEeCCCC---CCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        198 SHSCSSFNNDIALLELTRSI---QWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       198 ~y~~~~~~~DIALl~L~~~v---~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .      .+|||||||++++   .|+..++|+||+.......+..++++|||....        ..++.....++..   
T Consensus        90 ~------~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~--------~~~~~~~~g~i~~---  152 (268)
T 1wcz_A           90 G------EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKP--------VATMWESKGKITY---  152 (268)
T ss_dssp             S------SSCCEEEEECCCTTSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTSS--------TTCEEEEEEEEEE---
T ss_pred             C------CCcEEEEEecCcccccccccccceeecccccccCCCCEEEEEECCCCCC--------CceEEeecceEEe---
Confidence            3      5899999999997   466789999998654336788999999996532        1233333333331   


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                                  +...++|.     ..+.|                              +|||||||++..   +.|+|
T Consensus       153 ------------~~~~~i~~-----~~~~c------------------------------~GdSGGPLv~~~---g~lvG  182 (268)
T 1wcz_A          153 ------------LKGEAMQY-----DLSTT------------------------------GGNSGSPVFNEK---NEVIG  182 (268)
T ss_dssp             ------------EETTEEEE-----SBCCC------------------------------TTCTTCEEECTT---SCEEE
T ss_pred             ------------eCCCeEEE-----ecccC------------------------------CCCccCeEEccC---CEEEE
Confidence                        23457775     35678                              999999999642   36999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|||..|..  .+.+|+ ++.|++||++.|+.
T Consensus       183 IvS~G~~~~~--~~~~~~-~~~~~~wI~~~i~~  212 (268)
T 1wcz_A          183 IHWGGVPNEF--NGAVFI-NENVRNFLKQNIED  212 (268)
T ss_dssp             EEEEEETTTE--EEEEEC-CHHHHHHHHHHCTT
T ss_pred             EEeCCccCCc--ceeEEc-CHHHHHHHHHHHHh
Confidence            9999988864  245554 78899999988753

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=99.96  E-value=1e-28  Score=223.84  Aligned_cols=192  Identities=11%  Similarity=0.181  Sum_probs=136.1

Q ss_pred             cCCCCcceEEE--Ecc---CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECC
Q psy13815        123 ANPGEFPWIVS--LKR---HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHP  197 (388)
Q Consensus       123 ~~~~~~Pw~v~--i~~---~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp  197 (388)
                      +..++|||++.  |..   .+.++|+|+||+++||||||||+....  .....+.|++|...........+.+.+++.|+
T Consensus        12 ~~~~~~P~~~~v~i~~~~~~~~~~C~G~lI~~~~VLTAAHCv~~~~--~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~   89 (274)
T 2o8l_A           12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATH--GDPHALKAFPSAINQDNYPNGGFTAEQITKYS   89 (274)
T ss_dssp             SSTTSGGGTTEEEEEEEETTEEEEEEEEEEETTEEEECHHHHHTTT--TCGGGEEEEETCCBTTBCTTCCEEEEEEEECS
T ss_pred             cCCCCCCcceEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCcccC--CCcceEEEEecccCcccccCccEEEEEEEeCC
Confidence            45678888644  543   246899999999999999999996521  11345889998765432222256788888886


Q ss_pred             CCCCCCCCCcEEEEEeCCCC---CCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        198 SHSCSSFNNDIALLELTRSI---QWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       198 ~y~~~~~~~DIALl~L~~~v---~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .      .+|||||||++++   .|+..++|+||+.......+..++++|||.....        .++.....++..   
T Consensus        90 ~------~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~--------~~~~~~~g~i~~---  152 (274)
T 2o8l_A           90 G------EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPV--------ATMWESKGKITY---  152 (274)
T ss_dssp             S------SSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSST--------TCEEEEEEEEEE---
T ss_pred             C------CCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCCCC--------ceEEecCceEEe---
Confidence            3      5899999999997   4788999999986543367899999999965321        122222222221   


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                                  +...++|.     ..+.|                              +|||||||++..   +.|+|
T Consensus       153 ------------~~~~~i~~-----~~~~c------------------------------~GdSGGPLv~~~---g~lvG  182 (274)
T 2o8l_A          153 ------------LKGEAMQY-----DLSTT------------------------------GGNSGSPVFNEK---NEVIG  182 (274)
T ss_dssp             ------------EETTEEEE-----SCCCC------------------------------TTCTTCEEECTT---SCEEE
T ss_pred             ------------cCCCeEEe-----CcccC------------------------------CCCchhheeccC---CeEEE
Confidence                        22356775     35678                              999999999642   36999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+|||..|..  .+.+|+ ++.|++||++.|+
T Consensus       183 IvS~G~~~~~--~~~~~~-~~~~~~wI~~~i~  211 (274)
T 2o8l_A          183 IHWGGVPNEF--NGAVFI-NENVRNFLKQNIE  211 (274)
T ss_dssp             EEEEEETTTE--EEEEEC-CHHHHHHHHHHCT
T ss_pred             EEeCcccCCC--CceEEe-cHHHHHHHHHHHh
Confidence            9999988864  245544 7889999998875

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=99.95  E-value=1.7e-28  Score=212.51  Aligned_cols=187  Identities=14%  Similarity=0.193  Sum_probs=125.2

Q ss_pred             ecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCC
Q psy13815        122 AANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSC  201 (388)
Q Consensus       122 ~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~  201 (388)
                      .+..++|||++.+.   .+.|+|+||+++||||||||+...    ......+.++..... ...+.+.+.+++.+.    
T Consensus         7 i~~~~~~P~~v~~~---~~~c~G~lI~~~~VLTaaHcv~~~----~~~~~~v~v~~~~~~-~~~~~~~~~~i~~~~----   74 (200)
T 2w7s_A            7 ITDATKEPYNSVVA---FVGGTGVVVGKNTIVTNKHIAKSN----DIFKNRVSAHHSSKG-KGGGNYDVKDIVEYP----   74 (200)
T ss_dssp             ESCTTSTTGGGEEE---ETTEEEEEEETTEEEECHHHHHHH----HHTTCCEEETCCSSS-CCCCEECEEEEEECS----
T ss_pred             eeccccCCcccccc---cceEEEEEEECCEEEEChhhcCCc----ccCCcEEEEEecCcc-CCCcEEEEEEEecCC----
Confidence            46789999999886   357999999999999999998541    111123444432221 223456776666532    


Q ss_pred             CCCCCcEEEEEeCCC----CCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhH
Q psy13815        202 SSFNNDIALLELTRS----IQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAW  277 (388)
Q Consensus       202 ~~~~~DIALl~L~~~----v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~  277 (388)
                        ..+|||||||+++    +.|++.++|+||+. .. ..++.++++||+......     .  .+.....+++.      
T Consensus        75 --~~~DiAll~l~~~~~~~~~~~~~v~pi~l~~-~~-~~g~~v~v~G~p~g~~~~-----~--~~~~~~g~v~~------  137 (200)
T 2w7s_A           75 --GKEDLAIVHVHETSTEGLNFNKNVSYTKFAD-GA-KVKDRISVIGYPKGAQTK-----Y--KMFESTGTINH------  137 (200)
T ss_dssp             --SSSSCEEEEECSBCTTSCBGGGSCCCCCBCC-CC-CTTCEEEEEECTTHHHHT-----S--CEEEEEEEEEE------
T ss_pred             --CcceEEEEEECCCCCCcccccccccceeccc-cC-CCCCEEEEEECCCCCCCc-----c--ceEEeEEEEEc------
Confidence              1579999999986    88888999999983 22 578899999986432211     1  13344444442      


Q ss_pred             hhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEE
Q psy13815        278 YQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVS  357 (388)
Q Consensus       278 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s  357 (388)
                               ....++|..     .+.|                              +|||||||++..   ..|+||+|
T Consensus       138 ---------~~~~~~~~~-----~~~~------------------------------~GdSGGPl~~~~---g~lvGI~s  170 (200)
T 2w7s_A          138 ---------ISGTFMEFD-----AYAQ------------------------------PGNSGSPVLNSK---HELIGILY  170 (200)
T ss_dssp             ---------EETTEEEEC-----SCCC------------------------------TTCTTCEEECTT---SCEEEEEE
T ss_pred             ---------cCCCEEEEc-----ceeC------------------------------CCCccCeEECcC---CEEEEEEe
Confidence                     113467752     4667                              999999999743   25999999


Q ss_pred             ecCCCC-CCCCCeE-EEeCCCchhHHhhhhc
Q psy13815        358 TGIGCA-RPRLPGL-YTRLTRYIGWISDTLD  386 (388)
Q Consensus       358 ~g~~c~-~~~~p~v-~t~V~~~~~WI~~~i~  386 (388)
                      |+..|+ ....+.+ |+  +.|++||+++++
T Consensus       171 ~g~~~~~~~~~~~v~~~--~~~~~wI~~~~~  199 (200)
T 2w7s_A          171 AGSGKDESEKNFGVYFT--PQLKEFIQNNIE  199 (200)
T ss_dssp             EEC----CCCEEEEECC--HHHHHHHHHTSC
T ss_pred             ccccCCCCccceeeecH--HHHHHHHHhhcc
Confidence            998774 2122356 55  889999999886

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=99.95  E-value=1.9e-28  Score=213.05  Aligned_cols=186  Identities=16%  Similarity=0.269  Sum_probs=126.7

Q ss_pred             ecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCC
Q psy13815        122 AANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSC  201 (388)
Q Consensus       122 ~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~  201 (388)
                      .+..++|||++.+..   ..|+|+||+++||||||||+....   ....+.+..+. .  ......+.+.+++.|+.   
T Consensus         7 ~~~~~~~P~~~~~~~---~~c~G~lI~~~~VLTaaHcv~~~~---~~~~v~v~~~~-~--~~~~~~~~~~~i~~~~~---   74 (204)
T 2vid_A            7 VKDTNIFPYTGVVAF---KSATGFVVGKNTILTNKHVSKNYK---VGDRITAHPNS-D--KGNGGIYSIKKIINYPG---   74 (204)
T ss_dssp             CSCTTSTTGGGEEEC---SSCEEEEEETTEEEECHHHHTTCC---TTCEEEESCCS-S--SCCSCEEEEEEEEECSS---
T ss_pred             eccCCcCchhheEEe---eeEEEEEEECCEEEEChhHCCCcc---CCceEEEEecc-c--cCCCcEEEeeEEecCCC---
Confidence            467899999997753   479999999999999999996521   12234432221 1  12234567788887652   


Q ss_pred             CCCCCcEEEEEeCC--------CCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        202 SSFNNDIALLELTR--------SIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       202 ~~~~~DIALl~L~~--------~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                         .+|||||||+.        ++.|++.++|+||+. .. ..++.++++|||.....      ...+ ......+..  
T Consensus        75 ---~~DiAll~l~~~~~~~~~~~~~~~~~v~pi~l~~-~~-~~g~~~~~~G~g~~~~~------~~~~-~~~~g~v~~--  140 (204)
T 2vid_A           75 ---KEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAA-GA-KAGERIKVIGYPHPYKN------KYVL-YESTGPVMS--  140 (204)
T ss_dssp             ---SSCCEEEEECSEEEEEETTEEEHHHHCCCCCBCS-CC-CTTCEEEEEECCCCCC--------CCC-EEEEEEEEE--
T ss_pred             ---CCeEEEEEEcCcccccccccccccccccccccCC-cC-CCCCEEEEEeCCCCCCC------Ccce-EeeccEEee--
Confidence               57999999995        566777889999985 22 67889999999975432      1112 222222221  


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                                   +...++|.     +.+.|                              +|||||||++.   .+.|+
T Consensus       141 -------------~~~~~~~~-----~~~~~------------------------------~GdSGGPl~~~---~g~lv  169 (204)
T 2vid_A          141 -------------VEGSSIVY-----SAHTE------------------------------SGNSGSPVLNS---NNELV  169 (204)
T ss_dssp             -------------EETTEEEE-----CCCCC------------------------------GGGTTCEEECT---TSCEE
T ss_pred             -------------ccCCeEEE-----ecccC------------------------------CCCccCcEECC---CCeEE
Confidence                         23467886     34678                              99999999964   23699


Q ss_pred             EEEEecC---CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        354 GLVSTGI---GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       354 Gi~s~g~---~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ||+|++.   .|...+.+.+|+  +.|++||+++++
T Consensus       170 GI~s~g~~~~~~~~~~~~~~~~--~~~~~wI~~~~~  203 (204)
T 2vid_A          170 GIHFASDVKNDDNRNAYGVYFT--PEIKKFIAENID  203 (204)
T ss_dssp             EEEEEECC---CCCCEEEECCC--HHHHHHHHHHSC
T ss_pred             EEEecCccCCCcccccceeEeC--HHHHHHHHhhcC
Confidence            9999997   355444333344  889999999886

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=99.95  E-value=3e-28  Score=218.49  Aligned_cols=185  Identities=17%  Similarity=0.254  Sum_probs=120.6

Q ss_pred             EEEEccCCceeEEEEEeeC------CEEEecCcCCCCCCCCCccceEEEEeccccCC--C-----------CceeeeceE
Q psy13815        131 IVSLKRHGGHFCGGTIIHE------QWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--R-----------PSISTVPVL  191 (388)
Q Consensus       131 ~v~i~~~~~~~C~GtLI~~------~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~-----------~~~~~~~v~  191 (388)
                      +++|...+.++|+|+||++      +||||||||+...  ......++|.++.....  .           .......+.
T Consensus        25 V~rl~~~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~--~~~~~~~~v~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~  102 (268)
T 1arb_A           25 VGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGT--ASTAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSG  102 (268)
T ss_dssp             EEEEEETTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCS--HHHHHTCEEEESCCCSSCCCTTSGGGGSCCCCCCCCEEEC
T ss_pred             EEEEEeCCccEEeEEEEcCCCCCCCCEEEEcHHhCCCc--cCcceEEEEEeCCCCCccccccccccccccCCcceEEecc
Confidence            4677777889999999998      6999999998641  01234566777643221  1           011122366


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCC----CCccceEEEEE
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGR----RSNILQKVALS  267 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~----~~~~l~~~~~~  267 (388)
                      .++.|+.     ..||||||||++|+.                 .+..++++|||.+........    ....++++.+ 
T Consensus       103 ~~i~h~~-----~~nDIALLrL~~~v~-----------------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l~~i~~-  159 (268)
T 1arb_A          103 STVKATY-----ATSDFTLLELNNAAN-----------------PAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISN-  159 (268)
T ss_dssp             EEEEEEE-----TTTTEEEEEESSCCC-----------------GGGCCEEBCEECCSCCCSCEEEEECGGGCSCEEEE-
T ss_pred             ceEecCC-----CCCceEEEEecCCCC-----------------CCCceEEeCcCccCCCCCcceeeccCCcccEEEEe-
Confidence            7888883     468999999999752                 234578999999875422100    0113444444 


Q ss_pred             eechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecC
Q psy13815        268 VVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA  347 (388)
Q Consensus       268 i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~  347 (388)
                          ..|.......  ...+.+.|+|++...+..++|                              .|||||||++.  
T Consensus       160 ----~~~~~~~~~~--~~~~~~~~iCag~~~~~gdtC------------------------------~gdsGgPl~~~--  201 (268)
T 1arb_A          160 ----STSPTSFVAW--GGGAGTTHLNVQWQPSGGVTE------------------------------PGSSGSPIYSP--  201 (268)
T ss_dssp             ----ECSCCEEECT--TSSSCSSEEEEECCTTSCCCC------------------------------TTCTTCEEECT--
T ss_pred             ----eccccccccc--cccccCCeEEEeeecCCCCCc------------------------------cCcccCCcEee--
Confidence                4443110000  113567999997542223688                              99999999974  


Q ss_pred             CccEEEEEEEecC-CCCCC--CCCeEEEeCCCchh
Q psy13815        348 ESTQVIGLVSTGI-GCARP--RLPGLYTRLTRYIG  379 (388)
Q Consensus       348 ~~~~l~Gi~s~g~-~c~~~--~~p~v~t~V~~~~~  379 (388)
                       .++|+||+|||. .|..+  +.|+|||||+.|++
T Consensus       202 -~~~~~Gi~s~g~~~C~~~~~~~p~vyt~v~~~~~  235 (268)
T 1arb_A          202 -EKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWT  235 (268)
T ss_dssp             -TSCEEEEEEECSCCTTCCGGGSEEEEEEHHHHHH
T ss_pred             -CCEEEEEEeecCcccCCCCCCCCceEEEeeeeec
Confidence             246999999997 79876  38999999976653

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=99.94  E-value=2.8e-27  Score=211.10  Aligned_cols=193  Identities=14%  Similarity=0.193  Sum_probs=134.8

Q ss_pred             ecCCCCcceEE--EEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCc----eeeeceEEEEE
Q psy13815        122 AANPGEFPWIV--SLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPS----ISTVPVLRIMF  195 (388)
Q Consensus       122 ~~~~~~~Pw~v--~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~----~~~~~v~~i~~  195 (388)
                      ++..++|||++  ++...+.++|+|+||+++||||||||+....  .....+.+..|........    .+.+.+..++.
T Consensus        35 ~a~~~~~p~~~~v~i~~~~~~~c~G~lI~~~~VLTAaHcv~~~~--~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~  112 (242)
T 1agj_A           35 EKDRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAKFAN--GDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQ  112 (242)
T ss_dssp             TTGGGSTTGGGEEEEEETTTEEEEEEECSSSEEEECHHHHGGGT--TCGGGEEEEETCEECTTSCEECTTCCEEEEEEES
T ss_pred             cccccccccceEEEEEECCCccEEEEEEeCCEEEEChhhcccCC--CCceEEEEecCccccccccccccCCceeEEEEEe
Confidence            36678899975  4455567899999999999999999996521  1112345545665432111    13567888889


Q ss_pred             CCCCCCCCCCCcEEEEEeCCCCC---CCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        196 HPSHSCSSFNNDIALLELTRSIQ---WSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       196 hp~y~~~~~~~DIALl~L~~~v~---~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      || |+   ..+|||||+|++++.   |++.++|+||+.......++.++++|||.....       ..++...+.+++..
T Consensus       113 ~~-~~---~~~DiAll~l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~-------~~l~~~~~~~~~~~  181 (242)
T 1agj_A          113 EP-FG---AGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKV-------NQMHRSEIELTTLS  181 (242)
T ss_dssp             CT-TC---TTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTST-------TCCEEEEEEECCGG
T ss_pred             CC-CC---CCCcEEEEEEcCCCccccccccccceecCccccCCCCCEEEEEeCCCCCCC-------ccceeeeeeEecCC
Confidence            99 75   468999999999964   566799999986544367899999999976542       24666666665421


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                                       ..++.     ..+.|                              +|||||||++..   ..|
T Consensus       182 -----------------~~~~~-----~~~~c------------------------------~GdSGGPl~~~~---g~l  206 (242)
T 1agj_A          182 -----------------RGLRY-----YGFTV------------------------------PGNSGSGIFNSN---GEL  206 (242)
T ss_dssp             -----------------GSEEE-----ECCCC------------------------------GGGTTCEEECTT---SEE
T ss_pred             -----------------ceEEE-----eCCcC------------------------------CCCCchHhcccC---CEE
Confidence                             11222     12467                              999999999743   379


Q ss_pred             EEEEEecCCCC-CCCCCeEEEeCCCchhHHh
Q psy13815        353 IGLVSTGIGCA-RPRLPGLYTRLTRYIGWIS  382 (388)
Q Consensus       353 ~Gi~s~g~~c~-~~~~p~v~t~V~~~~~WI~  382 (388)
                      +||+|||.+|. ......+.+.|...+.|+.
T Consensus       207 vGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l  237 (242)
T 1agj_A          207 VGIHSSKVSHLDREHQINYGVGIGNYVKRII  237 (242)
T ss_dssp             EEEEEEEEECSSTTCEEEEEEECCHHHHHHH
T ss_pred             EEEEeccccccCcCCCceeeEEehHHHHHHH
Confidence            99999999986 3345678899985555443

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=99.91  E-value=7.8e-26  Score=193.19  Aligned_cols=169  Identities=20%  Similarity=0.218  Sum_probs=117.3

Q ss_pred             ceeEE-EEEeeC---CEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeC
Q psy13815        139 GHFCG-GTIIHE---QWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELT  214 (388)
Q Consensus       139 ~~~C~-GtLI~~---~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~  214 (388)
                      ...|+ |.++..   +||||||||+..      ...+.+..+.       .+.  +..+ .+.+|    ..+|||||||+
T Consensus        11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~------~~~~~v~~~~-------~~~--~g~~-~~~~~----~~~DiAll~l~   70 (185)
T 2qa9_E           11 TGRCSLGFNVRSGSTYYFLTAGHCTDG------ATTWWANSAR-------TTV--LGTT-SGSSF----PNNDYGIVRYT   70 (185)
T ss_dssp             SCEEECCEEEEETTEEEEEECHHHHTT------CSEEESSTTS-------CSE--EEEE-EEEEC----SBSCEEEEEEC
T ss_pred             CCcEeccEEEEECCceEEEECcccCCC------CCcEEecCCC-------ceE--eEEE-ecccc----CCCCEEEEEec
Confidence            45799 898874   699999999965      2233322110       011  1111 22222    35899999999


Q ss_pred             C-CCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEE
Q psy13815        215 R-SIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC  293 (388)
Q Consensus       215 ~-~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~C  293 (388)
                      + ++.+++.++|++|+.......++.+.++||+...       ....|+...+++ ...+|. .+.      .+...|+|
T Consensus        71 ~~~~~~~~~v~~~~l~~~~~~~~g~~v~~~Gw~~~~-------~~g~l~~~~~~v-~~~~~~-~~~------~~~~~~~c  135 (185)
T 2qa9_E           71 NTTIPKDGTVGGQDITSAANATVGMAVTRRGSTTGT-------HSGSVTALNATV-NYGGGD-VVY------GMIRTNVC  135 (185)
T ss_dssp             CSSSCCCCEETTEECCEECCCCTTCEEEEEETTTEE-------EEEEEEEEEEEE-ECSTTC-EEE------EEEEESCC
T ss_pred             CCCccccCccceeeeCCcccCCCCCEEEEecCCCce-------eEeEEEEEEEEE-EcCCCC-EEe------ceEEeccc
Confidence            9 9999999999999854333678999999996421       145677777775 333332 111      12345666


Q ss_pred             eccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEe
Q psy13815        294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTR  373 (388)
Q Consensus       294 a~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~  373 (388)
                      +         |                              +|||||||++..    +|+||+||+.+|...+.|++||+
T Consensus       136 a---------c------------------------------~GDSGGPlv~~~----~~vGI~s~g~~~~~~~~p~vyt~  172 (185)
T 2qa9_E          136 A---------E------------------------------PGDSGGPLYSGT----RAIGLTSGGSGNCSSGGTTFFQP  172 (185)
T ss_dssp             C---------C------------------------------TTCTTCEEEETT----EEEEEEEEEEEETTTEEEEEEEE
T ss_pred             C---------C------------------------------CCCccceEEECC----EEEEEEEecCCCCCCCCcEEEEE
Confidence            5         6                              999999999853    79999999987666678999999


Q ss_pred             CCCchhHHhhhh
Q psy13815        374 LTRYIGWISDTL  385 (388)
Q Consensus       374 V~~~~~WI~~~i  385 (388)
                      |+.|++||+.++
T Consensus       173 v~~~~~wI~~~l  184 (185)
T 2qa9_E          173 VTEALSAYGVSV  184 (185)
T ss_dssp             HHHHHHHHTCEE
T ss_pred             HHHHHHhhCcEE
Confidence            999999998754

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=99.91  E-value=2.3e-24  Score=187.86  Aligned_cols=188  Identities=15%  Similarity=0.213  Sum_probs=126.8

Q ss_pred             cCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCC
Q psy13815        123 ANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCS  202 (388)
Q Consensus       123 ~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~  202 (388)
                      +..++|||++.+.   .+.|+|+||+++||||||||+.+.   .....+.|.++...   ...+.+.+.+++.+.     
T Consensus         9 ~~~~~~P~~v~~~---~~~c~G~lI~~~~VLTaaHcv~~~---~~~~~i~v~~~~~~---~~g~~~~~~~v~~~~-----   74 (210)
T 2as9_A            9 KDTNNFPYNGVVS---FKDATGFVIGKNTIITNKHVSKDY---KVGDRITAHPNGDK---GNGGIYKIKSISDYP-----   74 (210)
T ss_dssp             SCTTSTTGGGEEE---CSSCEEEEEETTEEEECHHHHHHC---CTTCEEEESCCGGG---CCSCEEEEEEEEECS-----
T ss_pred             ecCCcCCeEEEEE---eeeEEEEEEeCCEEEECHhHCCcc---CCCCEEEEEeCccc---CCCCEEEEEEEEeCC-----
Confidence            4578999999875   357999999999999999999641   11235666655421   122346666666532     


Q ss_pred             CCCCcEEEEEeCC--------CCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        203 SFNNDIALLELTR--------SIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       203 ~~~~DIALl~L~~--------~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                       ..+|||||+|+.        |+.|++.++|++|+. .. ..++.++++||+.....      ...+ .....+++..  
T Consensus        75 -~~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~-~~-~~g~~v~v~G~p~~~~~------~~~l-~~~~g~v~~~--  142 (210)
T 2as9_A           75 -GDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAK-DA-KVDDKIKVIGYPLPAQN------SFKQ-FESTGTIKRI--  142 (210)
T ss_dssp             -SSSSCEEEEECSEEEEEETTEEEGGGSCCCCCBCS-CC-CTTCEEEEEECSSTTTT------TSCC-EEEEEEEEEE--
T ss_pred             -CCCcEEEEEecCccccccccccccccccceeecCC-CC-CCCCEEEEEeCCCCCCC------Ccce-EEeeeEEccc--
Confidence             257999999998        678888999999973 22 67899999999864322      1123 4445555431  


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                                   ...++|+.     ...|                              +|||||||++.. +  .|+|
T Consensus       143 -------------~~~~i~~~-----~~~~------------------------------~GdSGGPlv~~~-g--~lvG  171 (210)
T 2as9_A          143 -------------KDNILNFD-----AYIE------------------------------PGNSGSPVLNSN-N--EVIG  171 (210)
T ss_dssp             -------------ETTEEEEE-----CCCC------------------------------TTCTTCEEECTT-S--CEEE
T ss_pred             -------------cCCeEEEc-----CccC------------------------------CCCccCcEECCC-C--eEEE
Confidence                         13577763     3567                              999999999743 2  4999


Q ss_pred             EEEecCCCCCCCCCeEEEeC-CCchhHHhhhhccC
Q psy13815        355 LVSTGIGCARPRLPGLYTRL-TRYIGWISDTLDIH  388 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V-~~~~~WI~~~i~~~  388 (388)
                      |+||+........ ..|+.+ ....+|++..-..|
T Consensus       172 I~s~g~~~~~~~~-~~~~~~~~~i~~f~~~~~~~~  205 (210)
T 2as9_A          172 VVYGGIGKIGSEY-NGAVYFTPQIKDFIQKHIEQH  205 (210)
T ss_dssp             EECCSCCCTTCSS-EEEEECCHHHHHHHHTTCCCS
T ss_pred             EEecccccCCccc-cccEEEcHHHHHHHHHhhhhh
Confidence            9999875322122 235555 44677877665544

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=99.90  E-value=1.1e-23  Score=188.10  Aligned_cols=121  Identities=19%  Similarity=0.230  Sum_probs=90.4

Q ss_pred             cCCCCcceEEE--EccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC-----CceeeeceEEEEE
Q psy13815        123 ANPGEFPWIVS--LKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR-----PSISTVPVLRIMF  195 (388)
Q Consensus       123 ~~~~~~Pw~v~--i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~-----~~~~~~~v~~i~~  195 (388)
                      ...++|||++.  +...+.++|+|+||+++||||||||+.+..  .....+.+..|......     ...+.+.+..++.
T Consensus        29 ~~~~~~P~~~~~~i~~~~~~~c~G~lI~~~~VLTAaHcv~~~~--~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~  106 (246)
T 1qtf_A           29 TDNARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAREAA--KNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKE  106 (246)
T ss_dssp             SCCSSTTGGGEEEEEETTTEEEEEEEEETTEEEECHHHHGGGT--TCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEES
T ss_pred             hhcCcCchhcEEEEEECCCceEEEEEEECCEEEECHHhCCCCC--CCceEEEEecCccccccccccccCCceEEEEEEEe
Confidence            56788999865  444567899999999999999999996521  11245778788654322     0113577888999


Q ss_pred             CCCCCCCCCCCcEEEEEeCCCC---CCCCCeeeeeCCCCCCCCCCCeEEEEEccccC
Q psy13815        196 HPSHSCSSFNNDIALLELTRSI---QWSDLIRPACLPSGSLDYSEQSVTVAGWGWTN  249 (388)
Q Consensus       196 hp~y~~~~~~~DIALl~L~~~v---~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~  249 (388)
                      || |+   ..+|||||+|++++   .+++.++|+||+.......++.++++||+...
T Consensus       107 hp-~~---~~~DiALLkl~~~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~  159 (246)
T 1qtf_A          107 SP-YG---QGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNY  159 (246)
T ss_dssp             CT-TC---TTSCCEEEEECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTT
T ss_pred             CC-CC---CCCCEEEEEEeCCccccccccceeeeecCCccccCCCCEEEEEECCCCC
Confidence            99 64   46899999999998   56667999999965443678999999997543

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...

Probab=99.88  E-value=7.3e-23  Score=155.18  Aligned_cols=93  Identities=32%  Similarity=0.709  Sum_probs=83.7

Q ss_pred             CccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCc
Q psy13815        258 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD  337 (388)
Q Consensus       258 ~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd  337 (388)
                      +..|+++.+++++.++|+..+..     .+.++||||+.  .+.+.|                              .||
T Consensus         4 ~~~L~~~~v~i~~~~~C~~~~~~-----~i~~~~iCa~~--~~~~~C------------------------------~GD   46 (97)
T 1yph_E            4 PDRLQQASLPLLSNTNCKKYWGT-----KIKDAMICAGA--SGVSSC------------------------------MGD   46 (97)
T ss_dssp             CSBCEEEEEEBCCHHHHHHHHGG-----GCCTTEEEEEC--SSCBCC------------------------------TTC
T ss_pred             CccceEEEEEECCHHHhhHHhcC-----CCCCceEeecC--CCCCCC------------------------------cCC
Confidence            67899999999999999988752     47899999983  456889                              999


Q ss_pred             CCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        338 SGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       338 sGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |||||++..+++|+|+||+|||..|...+.|+|||||+.|++||+++++.
T Consensus        47 SGGPL~~~~~~~~~l~GIvS~g~~c~~~~~p~vyt~V~~y~~WI~~~~~~   96 (97)
T 1yph_E           47 SGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAA   96 (97)
T ss_dssp             TTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHhHHHHHHHHcc
Confidence            99999999889999999999999988778999999999999999999864

>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A

Probab=99.84  E-value=7.3e-21  Score=138.87  Aligned_cols=77  Identities=29%  Similarity=0.585  Sum_probs=66.9

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC--CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~--~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|...+.++|+|+||+++||||||||+..        .+.|++|..+...  ...+.+.|++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGslIs~~~VLTAAHC~~~--------~~~v~~G~~~~~~~~~~~~~~~v~~i~   72 (80)
T 2pka_A            1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKND--------NYEVWLGRHNLFENENTAQFFGVTADF   72 (80)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS--------CCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCceEEEEEEEcCCEEEECHHHCCC--------CcEEEEeeeEcCCCCCCcEEEEEEEEE
Confidence            689999999999999999888889999999999999999999854        3468899887653  345778999999


Q ss_pred             ECCCCCC
Q psy13815        195 FHPSHSC  201 (388)
Q Consensus       195 ~hp~y~~  201 (388)
                      .||+|+.
T Consensus        73 ~Hp~y~~   79 (80)
T 2pka_A           73 PHPGFNL   79 (80)
T ss_dssp             ECTTTTT
T ss_pred             ECcCCCC
Confidence            9999974

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=99.79  E-value=1.1e-20  Score=160.52  Aligned_cols=157  Identities=19%  Similarity=0.200  Sum_probs=105.2

Q ss_pred             ceeEE-EEEee---CCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeC
Q psy13815        139 GHFCG-GTIIH---EQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELT  214 (388)
Q Consensus       139 ~~~C~-GtLI~---~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~  214 (388)
                      ...|+ |.||+   ++||||||||+...      .  .+.+|...                .+.|    ..+|||||||+
T Consensus        11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~~------~--~~~~G~~~----------------~~~~----~~~DiAlikl~   62 (181)
T 2sga_A           11 GSRCSLGFNVSVNGVAHALTAGHCTNIS------A--SWSIGTRT----------------GTSF----PNNDYGIIRHS   62 (181)
T ss_dssp             TEEEECCEEEEETTEEEEEECHHHHTTC------S--EETTEEEE----------------EEEC----SBSCEEEEEES
T ss_pred             CCcEeccEEEEECCceEEEECcccCCCC------C--ceeeccee----------------CCcC----CCCCEEEEEcc
Confidence            45799 99998   68999999998541      1  22333321                0111    24799999999


Q ss_pred             CCCCCCCCeeee----eCCCC-CCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCC
Q psy13815        215 RSIQWSDLIRPA----CLPSG-SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE  289 (388)
Q Consensus       215 ~~v~~~~~v~pi----cLp~~-~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~  289 (388)
                      +++.+++.++++    +++.. .....++.+.+.||+....       ...++...+.+ +..++. .+          .
T Consensus        63 ~~~~~~~~v~~i~~~~~~~~~~~~~~~G~~v~~~G~~~~~t-------~G~v~~~~~~v-~~~~~~-~~----------~  123 (181)
T 2sga_A           63 NPAAADGRVYLYNGSYQDITTAGNAFVGQAVQRSGSTTGLR-------SGSVTGLNATV-NYGSSG-IV----------Y  123 (181)
T ss_dssp             CGGGCCCEEECSSSCEEECCEECCCCTTCEEEEEETTTEEE-------EEEEEEEEEEE-ECGGGC-EE----------E
T ss_pred             CCCcccceEEecCCcceeecccccCCCCCEEEEeecCCCcc-------EEEEEEeEEEE-ECCCCC-EE----------e
Confidence            998888889988    77642 2226788888888864321       23456666654 332221 01          1


Q ss_pred             CeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCC-CCCCCCC
Q psy13815        290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG-CARPRLP  368 (388)
Q Consensus       290 ~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~-c~~~~~p  368 (388)
                      .+++.     ....|                              +|||||||++..    .++||+||+.. |. ...|
T Consensus       124 ~~i~~-----~~c~~------------------------------~GDSGGPlv~~~----~~vGI~s~g~~~~~-~~~~  163 (181)
T 2sga_A          124 GMIQT-----NVCAQ------------------------------PGDSGGSLFAGS----TALGLTSGGSGNCR-TGGT  163 (181)
T ss_dssp             EEEEE-----SCCCC------------------------------TTCTTCEEEETT----EEEEEEEEEEEETT-TEEE
T ss_pred             eeEec-----ccccC------------------------------CCCCCCEEEECC----EEEEEEEeeCCCCc-CCCc
Confidence            13322     11123                              899999999754    69999999975 54 3569


Q ss_pred             eEEEeCCCchhHHh
Q psy13815        369 GLYTRLTRYIGWIS  382 (388)
Q Consensus       369 ~v~t~V~~~~~WI~  382 (388)
                      ++|++|+.|++|+.
T Consensus       164 ~v~~~v~~~~~~l~  177 (181)
T 2sga_A          164 TFYQPVTEALSAYG  177 (181)
T ss_dssp             EEEEEHHHHHHHHT
T ss_pred             eEEEEHHHHHHhcC
Confidence            99999999999985

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...

Probab=99.79  E-value=7.3e-20  Score=138.59  Aligned_cols=86  Identities=29%  Similarity=0.589  Sum_probs=74.8

Q ss_pred             CCCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC--
Q psy13815          1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP--   78 (388)
Q Consensus         1 ~~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~--   78 (388)
                      +.|+.||+++++++++++|+..++.     .+++.||||+.  .+.+.|+|||||||++..+++|+|+||+||+.+|.  
T Consensus         2 ~~~~~L~~~~v~i~~~~~C~~~~~~-----~i~~~~iCa~~--~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~~   74 (97)
T 1yph_E            2 NTPDRLQQASLPLLSNTNCKKYWGT-----KIKDAMICAGA--SGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCST   74 (97)
T ss_dssp             CCCSBCEEEEEEBCCHHHHHHHHGG-----GCCTTEEEEEC--SSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCT
T ss_pred             CcCccceEEEEEECCHHHhhHHhcC-----CCCCceEeecC--CCCCCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCCC
Confidence            3578999999999999999998764     57899999983  45799999999999998889999999999998772  


Q ss_pred             ---c--eeeEEEEeeccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~   93 (388)
                         +  ++|+.|.+||.+++
T Consensus        75 ~~p~vyt~V~~y~~WI~~~~   94 (97)
T 1yph_E           75 STPGVYARVTALVNWVQQTL   94 (97)
T ss_dssp             TSEEEEEEHHHHHHHHHHHH
T ss_pred             CCCeEEEEHHHhHHHHHHHH
Confidence               2  88889999998764

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=99.75  E-value=1.4e-17  Score=147.51  Aligned_cols=180  Identities=18%  Similarity=0.216  Sum_probs=113.8

Q ss_pred             CcceEEEEccCC-----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCC
Q psy13815        127 EFPWIVSLKRHG-----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSC  201 (388)
Q Consensus       127 ~~Pw~v~i~~~~-----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~  201 (388)
                      ..|.+|.|....     ...|+|+||+++||||||||+..      ...+.|.++.        ..+....+..|+    
T Consensus        40 ~~~svV~I~~~~~~~~~~~~GsG~iI~~~~VlTaaH~v~~------~~~~~V~~~~--------~~~~~~~v~~~~----  101 (237)
T 3k6y_A           40 TEPSVVKIRSLAPRCQKVLEGTGFVISPDRVMTNAHVVAG------SNNVTVYAGD--------KPFEATVVSYDP----  101 (237)
T ss_dssp             HGGGEEEEEEEEGGGTEEEEEEEEEEETTEEEECGGGTTT------CSEEEEEETT--------EEEECEEEEEET----
T ss_pred             hcCCEEEEEEEecCCCcceeEEEEEEECCEEEECHHHcCC------CceEEEEECC--------cEEEEEEEEEcC----
Confidence            357888886532     56899999999999999999965      3567787765        134455556666    


Q ss_pred             CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcC
Q psy13815        202 SSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSE  281 (388)
Q Consensus       202 ~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~  281 (388)
                         .+|||||||+     +..++|++|+.... ..++.++++||+....        ..+....+.......|...+...
T Consensus       102 ---~~DiAll~l~-----~~~~~~~~l~~~~~-~~G~~v~v~G~p~g~~--------~~~~~g~v~~~~~~~~~~~~~~~  164 (237)
T 3k6y_A          102 ---SVDVAILAVP-----HLPPPPLVFAAEPA-KTGADVVVLGYPGGGN--------FTATPARIREAIRLSGPDIYGDP  164 (237)
T ss_dssp             ---TTTEEEEECT-----TCCSCCCCBCSSCC-CTTCEEEEEECGGGCS--------CEEEEEEEEEEEEEEECCTTCCS
T ss_pred             ---CCCEEEEEeC-----CCCCCceecCCCCC-CCCCEEEEEECCCCCC--------CccceeEEEeeEeecccccccCC
Confidence               3699999998     34678999984333 7789999999986532        12233333322223333322200


Q ss_pred             CCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCC
Q psy13815        282 GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG  361 (388)
Q Consensus       282 ~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~  361 (388)
                         ......+++.     +...|                              +|||||||+... |  .|+||++++..
T Consensus       165 ---~~~~~~~~~~-----~~~~~------------------------------~GdSGGPLv~~~-G--~vvGI~s~~~~  203 (237)
T 3k6y_A          165 ---EPVTRDVYTI-----RADVE------------------------------QGDSGGPLIDLN-G--QVLGVVFGAAI  203 (237)
T ss_dssp             ---SCEEEEEEEE-----ESCCC------------------------------TTCTTCEEECTT-S--CEEEEEEEECS
T ss_pred             ---CcccccEEEe-----cCccC------------------------------CCccHHHEECCC-C--EEEEEEEeecc
Confidence               0011122332     23456                              999999999743 3  49999999763


Q ss_pred             CCCCCCCeEEEeCCCchhHHhhh
Q psy13815        362 CARPRLPGLYTRLTRYIGWISDT  384 (388)
Q Consensus       362 c~~~~~p~v~t~V~~~~~WI~~~  384 (388)
                      -..  .-.....+....+||++.
T Consensus       204 ~~~--~~~~aip~~~v~~~l~~~  224 (237)
T 3k6y_A          204 DDA--ETGFVLTAGEVAGQLAKI  224 (237)
T ss_dssp             SST--TEEEEEEHHHHHGGGGGT
T ss_pred             CCC--cEEEEEEHHHHHHHHHHc
Confidence            221  124556666666766654

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=99.71  E-value=1.4e-16  Score=140.27  Aligned_cols=179  Identities=20%  Similarity=0.207  Sum_probs=111.2

Q ss_pred             cceEEEEccCC----------ceeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        128 FPWIVSLKRHG----------GHFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       128 ~Pw~v~i~~~~----------~~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      .|.+|.|....          ...++|+||+++ ||||||||+..      ...+.|.++..       ..+....+..+
T Consensus        41 ~~sVV~I~~~~~~~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~------~~~i~V~~~~g-------~~~~a~v~~~d  107 (231)
T 3tjo_A           41 APAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTN------KHRVKVELKNG-------ATYEAKIKDVD  107 (231)
T ss_dssp             GGGEEEEEEEEECTTSSCEEEEEEEEEEECSTTCEEEEETTTCCS------SSEEEEECTTS-------CEEEEEEEEEE
T ss_pred             cCcEEEEEEEeccccCCCccccceEEEEEEeCCCEEEEchhcccC------CceEEEEcCCC-------CEEEEEEEEec
Confidence            46677775322          157999999998 99999999965      45667766432       23445555556


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA  276 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~  276 (388)
                      |       .+|||||+|+.+.    .+.|+.|+.......++.++++||+....        ..+..   .++....+..
T Consensus       108 ~-------~~DlAlL~l~~~~----~~~~~~l~~~~~~~~G~~v~~~G~p~g~~--------~~~~~---g~vs~~~~~~  165 (231)
T 3tjo_A          108 E-------KADIALIKIDHQG----KLPVLLLGRSSELRPGEFVVAIGSPFSLQ--------NTVTT---GIVSTTQRGG  165 (231)
T ss_dssp             T-------TTTEEEEECCCSS----CCCCCCBCCGGGCCTTCEEEEEEEEETTE--------EEEEE---EEEEECC---
T ss_pred             C-------CCCEEEEEecCCC----CCCceecCCcCCCCCCCEEEEEECCCCCC--------Cceee---EEEeeccccc
Confidence            5       3699999999763    35778887654446789999999986421        11222   2222222211


Q ss_pred             HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEE
Q psy13815        277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV  356 (388)
Q Consensus       277 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~  356 (388)
                      ....   .......++++.     ...|                              +|||||||+... |  .|+||+
T Consensus       166 ~~~~---~~~~~~~~i~~d-----a~i~------------------------------~G~SGGPLv~~~-G--~vVGI~  204 (231)
T 3tjo_A          166 KELG---LRNSDMDYIQTD-----AIIN------------------------------YGNAGGPLVNLD-G--EVIGIN  204 (231)
T ss_dssp             -------------CCEEES-----SCCC------------------------------TTTTTSEEECTT-S--CEEEEE
T ss_pred             cccc---cCCCcccEEEEc-----CCcC------------------------------CCCchhHeecCC-C--eEEEEE
Confidence            1000   001112344442     3445                              999999999543 2  499999


Q ss_pred             EecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        357 STGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       357 s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +++..++    -.....+....+||++..+
T Consensus       205 s~~~~~g----~~~aip~~~i~~~l~~~~~  230 (231)
T 3tjo_A          205 TLKVTAG----ISFAIPSDKIKKFLTESHD  230 (231)
T ss_dssp             EEEEETT----EEEEEEHHHHHHHHHHHHT
T ss_pred             eEEecCC----eEEEEEHHHHHHHHHHHhh
Confidence            9986532    3566788888888887654

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=99.67  E-value=1.7e-16  Score=140.25  Aligned_cols=173  Identities=17%  Similarity=0.156  Sum_probs=109.9

Q ss_pred             ceeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCC
Q psy13815        139 GHFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSI  217 (388)
Q Consensus       139 ~~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v  217 (388)
                      ...|+|+||+++ ||||+|||+.+      ...+.|.++..       +.+.++-+..+       ..+|||||||+.++
T Consensus        55 ~~~gsG~iI~~~g~ILTnaHvv~~------~~~i~V~~~~g-------~~~~a~vv~~d-------~~~DlAllkl~~~~  114 (239)
T 1l1j_A           55 ASLGSGFIFDPEGYILTNYHVVGG------ADNITVTMLDG-------SKYDAEYIGGD-------EELDIAVIKIKASD  114 (239)
T ss_dssp             EEEEEEEEEETTTEEEEEHHHHSS------CSSCEEECTTS-------CEEEBCCCEEE-------TTTTEEEEEBCCSS
T ss_pred             CceEEEEEEeCCCEEEEChHHhCC------CCEEEEEECCC-------CEEEEEEEEEc-------CCCCEEEEEEcCCC
Confidence            467999999986 99999999965      34567777632       22323222222       35799999999875


Q ss_pred             CCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccC
Q psy13815        218 QWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHE  297 (388)
Q Consensus       218 ~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~  297 (388)
                         +.+.|++|+.......++.++++||+....           +.....+++...|.  +... ........++|+.  
T Consensus       115 ---~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~-----------~~vt~Givs~~~r~--~~~~-~~~~~~~~~i~td--  175 (239)
T 1l1j_A          115 ---KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQ-----------HTVTVGVVSATNRR--IPKP-DGSGYYVGLIQTD--  175 (239)
T ss_dssp             ---SCCCCCEECCGGGCCTTCEEEEEECTTSSS-----------CEEEEEEEEEEEEE--EECT-TSSCEEEEEEEES--
T ss_pred             ---CCCceEEecCccCCccccEEEEEECCCCCC-----------CcEEEEEEeccccc--cccC-CCccccCCEEEEC--
Confidence               457899998754336789999999986432           11222333332222  0000 0000123578873  


Q ss_pred             CCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCc
Q psy13815        298 QGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRY  377 (388)
Q Consensus       298 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~  377 (388)
                         ...|                              +|||||||+...+   .|+||++++..-+.....+....+...
T Consensus       176 ---a~i~------------------------------~G~SGGPLv~~~G---~vvGI~s~~~~~~~~~g~~faIP~~~~  219 (239)
T 1l1j_A          176 ---AAIN------------------------------PGNSGGPLLNIHG---EVIGINTAIVNPQEAVNLGFAIPINTV  219 (239)
T ss_dssp             ---SCCC------------------------------TTTTTSEEECSSS---EEEEEECCCSCCCSCCSCEEEEEHHHH
T ss_pred             ---CCCC------------------------------CCCccHHhccCCC---eEEEEEeeeecCCCcCceEEEEEHHHH
Confidence               4567                              9999999996432   699999998651111234677788888


Q ss_pred             hhHHhhhhc
Q psy13815        378 IGWISDTLD  386 (388)
Q Consensus       378 ~~WI~~~i~  386 (388)
                      .+++++.++
T Consensus       220 ~~~~~~l~~  228 (239)
T 1l1j_A          220 KKFLDTILT  228 (239)
T ss_dssp             HHHHGGGCC
T ss_pred             HHHHHHHHH
Confidence            888887653

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=99.67  E-value=8e-16  Score=142.65  Aligned_cols=192  Identities=19%  Similarity=0.197  Sum_probs=114.0

Q ss_pred             CcceEEEEccC---CceeEEEEEeeC-CEEEecCcCCCCCCCC---CccceEEEEeccccCCCCceeeeceEEEEECCCC
Q psy13815        127 EFPWIVSLKRH---GGHFCGGTIIHE-QWIVTAAHCLCNGPSP---LSASQINVTLKEHDLSRPSISTVPVLRIMFHPSH  199 (388)
Q Consensus       127 ~~Pw~v~i~~~---~~~~C~GtLI~~-~~VLTAAhCv~~~~~~---~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y  199 (388)
                      ..|++|.|...   ....|+|+||++ .||||+|||+......   .....+.|.++..       +.+... ++ +  |
T Consensus        15 ~~~svV~I~~~~~~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g-------~~~~a~-vv-~--~   83 (324)
T 1y8t_A           15 VVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDG-------RTAPFT-VV-G--A   83 (324)
T ss_dssp             HGGGEEEEEEEC----CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTC-------CEECEE-EE-E--C
T ss_pred             hcCcEEEEEEEccCCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCC-------CEEEEE-EE-E--e
Confidence            36999999753   467899999998 6999999999652100   0123677777632       233443 22 1  2


Q ss_pred             CCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhh
Q psy13815        200 SCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ  279 (388)
Q Consensus       200 ~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~  279 (388)
                      +   ..+|||||+|+.+    ..+.|++|+.......++.++++||......        .+   ...+++...+.....
T Consensus        84 d---~~~DlAllkl~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~--------~~---~~G~vs~~~~~~~~~  145 (324)
T 1y8t_A           84 D---PTSDIAVVRVQGV----SGLTPISLGSSSDLRVGQPVLAIGSPLGLEG--------TV---TTGIVSALNRPVSTT  145 (324)
T ss_dssp             C---TTTTEEEEEECSC----CSCCCCEECCSTTCCTTCEEEEEECGGGCTT--------EE---EEEEEEEEEEEECC-
T ss_pred             C---CCCCEEEEEECCC----CCCceEEecCcccCCCCCEEEEEEcCCCCCC--------cE---eeeEEeecccccccc
Confidence            2   2589999999987    3578999987544367899999999543211        11   111111111100000


Q ss_pred             cCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEec
Q psy13815        280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTG  359 (388)
Q Consensus       280 ~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g  359 (388)
                      ...........++|+.     ...|                              +|||||||+...+   .|+||++++
T Consensus       146 ~~~g~~~~~~~~i~~d-----~~~~------------------------------~G~SGGPlv~~~G---~vvGI~s~~  187 (324)
T 1y8t_A          146 GEAGNQNTVLDAIQTD-----AAIN------------------------------PGNSGGALVNMNA---QLVGVNSAI  187 (324)
T ss_dssp             ------CCCEEEEEEC-----SCCC------------------------------TTCTTEEEECTTS---EEEEEEEEE
T ss_pred             cccCcccccCCEEEEc-----CCCC------------------------------CCCccCcEECCCC---eEEEEEeee
Confidence            0000001234688873     4567                              9999999997543   699999997


Q ss_pred             CCCC--------CCCCCeEEEeCCCchhHHhhhh
Q psy13815        360 IGCA--------RPRLPGLYTRLTRYIGWISDTL  385 (388)
Q Consensus       360 ~~c~--------~~~~p~v~t~V~~~~~WI~~~i  385 (388)
                      ..-.        .......+..+....+++++.+
T Consensus       188 ~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~  221 (324)
T 1y8t_A          188 ATLGADSADAQSGSIGLGFAIPVDQAKRIADELI  221 (324)
T ss_dssp             CCC-------CCCCSSCEEEEEHHHHHHHHHHHH
T ss_pred             cccCcccccccccccceEEecCHHHHHHHHHHHH
Confidence            5321        1112356677777777776654

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=99.65  E-value=7.6e-16  Score=143.98  Aligned_cols=172  Identities=19%  Similarity=0.228  Sum_probs=113.7

Q ss_pred             eeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        140 HFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       140 ~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ..++|+||+++ ||||+|||+..      ...+.|.+...       ..+....+..++       .+|||||||+.+. 
T Consensus        53 g~GSG~iI~~~G~IlT~aHvv~~------~~~i~V~~~~g-------~~~~a~~v~~d~-------~~DlAlLkl~~~~-  111 (348)
T 3qo6_A           53 GSGSGFVWDKQGHIVTNYHVIRG------ASDLRVTLADQ-------TTFDAKVVGFDQ-------DKDVAVLRIDAPK-  111 (348)
T ss_dssp             EEEEEEEEETTTEEEECHHHHTT------CSEEEEECTTS-------CEEEEEEEEEEG-------GGTEEEEECCCCG-
T ss_pred             ceEEEEEEeCCCEEEECHHHhCC------CcEEEEEECCC-------CEEEEEEEEEcC-------cCCEEEEEEcCCC-
Confidence            46999999998 99999999965      45667776432       234454455554       3699999999863 


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCC
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ  298 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~  298 (388)
                        ..+.|++|+.......++.++++||+....        ..+....+..+....|.....      .....+++.    
T Consensus       112 --~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~--------~~~~~g~vs~~~~~~~~~~~~------~~~~~~i~~----  171 (348)
T 3qo6_A          112 --NKLRPIPVGVSADLLVGQKVFAIGNPFGLD--------HTLTTGVISGLRREISSAATG------RPIQDVIQT----  171 (348)
T ss_dssp             --GGCCCCCBCCSTTCCTTCEEEEEECGGGCT--------TEEEEEEEEEEEEEECCSSSS------SCEEEEEEE----
T ss_pred             --CCceeEEecCcccCCCCCEEEEEECCCCCC--------CcEeEEEEEeeccccccccCC------CcccCEEEE----
Confidence              367899998765546889999999986532        123333333333222211100      001123333    


Q ss_pred             CCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCC-CCCCCCCeEEEeCCCc
Q psy13815        299 GGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRY  377 (388)
Q Consensus       299 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~-c~~~~~p~v~t~V~~~  377 (388)
                       +...|                              +|||||||+... |  .|+||+|++.. ++.....+++..+...
T Consensus       172 -da~i~------------------------------~G~SGGPLvn~~-G--~vvGI~s~~~~~~~~~~g~gfaiP~~~~  217 (348)
T 3qo6_A          172 -DAAIN------------------------------PGNSGGPLLDSS-G--TLIGINTAIYSPSGASSGVGFSIPVDTV  217 (348)
T ss_dssp             -CSCCC------------------------------TTCTTCEEECTT-S--CEEEEEEEEECSSSSCSSCEEEEEHHHH
T ss_pred             -eCCcC------------------------------CCCcHHHhhCCC-C--eEEEEEEeeecCCCCcccEEEEEEecch
Confidence             23456                              999999999643 2  39999999763 4434556788999999


Q ss_pred             hhHHhhhhc
Q psy13815        378 IGWISDTLD  386 (388)
Q Consensus       378 ~~WI~~~i~  386 (388)
                      .+||++.++
T Consensus       218 ~~~~~~l~~  226 (348)
T 3qo6_A          218 GGIVDQLVR  226 (348)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999988764

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=99.64  E-value=1.1e-16  Score=149.36  Aligned_cols=93  Identities=19%  Similarity=0.369  Sum_probs=78.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCC------------CccccCCCeeEecccCCCcCCCCCCCCCceEEee--CCcEEE
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEG------------KKINVKESQMCAGHEQGGKDACWADSGGPLMLLG--AESTQV   67 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~------------~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~--~~~~~~   67 (388)
                      .++.||+++++++++++|+..|....            ....++++|||||...+++++|+|||||||++..  +++|+|
T Consensus       233 ~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~l  312 (347)
T 4f4o_C          233 FTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYA  312 (347)
T ss_dssp             BCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEE
T ss_pred             CCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEE
Confidence            47889999999999999999875321            1224788999999877789999999999999864  579999


Q ss_pred             EeeEEeecCCC----c--eeeEEEEeecccccc
Q psy13815         68 IGLVSTGIGSP----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        68 ~Gi~s~~~~~~----~--~~~~~~~~wi~~~~~   94 (388)
                      +||+|||.+|.    +  |+|+.|.+||++++.
T Consensus       313 vGIvS~G~~C~~~~pgVYTrVs~y~~WI~~~i~  345 (347)
T 4f4o_C          313 AGILSFDKSCRTAEYGVYVRVTSILDWIQTTIA  345 (347)
T ss_dssp             EEEEEECCCTTTSSCEEEEEHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCCCCCeEEEEHHHHHHHHHHHHH
Confidence            99999999993    2  888999999998765

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=99.62  E-value=1.7e-16  Score=130.59  Aligned_cols=84  Identities=33%  Similarity=0.536  Sum_probs=71.8

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.||+++++++++++|+..|+.     .+++.||||+...++.+.|+|||||||++.+    +|+||+||| .+|.  
T Consensus        58 ~~~~L~~~~~~i~~~~~C~~~~~~-----~~~~~~iCa~~~~~~~~~C~GDsGgPL~~~g----~l~Gi~S~g~~~C~~~  128 (152)
T 2pka_B           58 FPDEIQCVQLTLLQNTFCADAHPD-----KVTESMLCAGYLPGGKDTCMGDSGGPLICNG----MWQGITSWGHTPCGSA  128 (152)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSS-----BCCTTEEEEECTTSSCBCCTTCTTCEEEETT----EEEEEECCCCSSTTCT
T ss_pred             CCccceEEEeEEcCHHHhhhhhcC-----CCCCCEEeeccCCCCCcccCCccccceEECC----EEEEEEecCCCCCCCC
Confidence            467899999999999999998754     5789999998655668999999999999974    699999999 7883  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++|+.|.+||.+.+.
T Consensus       129 ~~p~vyt~V~~y~~WI~~~~~  149 (152)
T 2pka_B          129 NKPSIYTKLIFYLDWIDDTIT  149 (152)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHhc
Confidence               2  888999999987653

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=99.62  E-value=1.3e-14  Score=128.25  Aligned_cols=168  Identities=14%  Similarity=0.196  Sum_probs=106.8

Q ss_pred             eeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        140 HFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       140 ~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ..++|+||+++ ||||+|||+.+      ...+.|.+...       ..+....+..||.       +|||||+|+.+. 
T Consensus        53 ~~GsG~ii~~~G~IlTaaHvv~~------~~~~~V~~~~g-------~~~~a~vv~~d~~-------~DlAll~l~~~~-  111 (237)
T 3lgi_A           53 TLGSGVIMDQRGYIITNKHVIND------ADQIIVALQDG-------RVFEALLVGSDSL-------TDLAVLKINATG-  111 (237)
T ss_dssp             EEEEEEEEETTTEEEEEHHHHTT------CSEEEEECTTS-------CEEEEEEEEEETT-------TTEEEEECCCSS-
T ss_pred             eEEEEEEEeCCCEEEEeeeecCC------CCEEEEEeCCC-------CEEEEEEEEEcCC-------CCEEEEEecCCC-
Confidence            47999999998 99999999965      45666766431       2455555566664       699999999765 


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCC
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ  298 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~  298 (388)
                         .+.++.|+.......++.++++||+....        ..+....+..+....+..         ......++.    
T Consensus       112 ---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~--------~~~~~g~vs~~~~~~~~~---------~~~~~~i~~----  167 (237)
T 3lgi_A          112 ---GLPTIPINARRVPHIGDVVLAIGNPYNLG--------QTITQGIISATGRIGLNP---------TGRQNFLQT----  167 (237)
T ss_dssp             ---CCCCCCCCTTCCCCTTBEEEEEECGGGSC--------SEEEEEEEEEECCSSCCT---------TSCSCCEEE----
T ss_pred             ---CCceEeccCcccCCCCCEEEEEECCCCCC--------CcEEEEEEEecccccccC---------CCcCCEEEE----
Confidence               35778887654446789999999986422        122222222222211110         112234444    


Q ss_pred             CCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCCCCC----CCCCeEEEeC
Q psy13815        299 GGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCAR----PRLPGLYTRL  374 (388)
Q Consensus       299 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~----~~~p~v~t~V  374 (388)
                       +...|                              +|||||||+... |  .|+||++++..-..    .........+
T Consensus       168 -d~~i~------------------------------~G~SGGPlv~~~-G--~vvGI~s~~~~~~~~~~~~~g~~~aip~  213 (237)
T 3lgi_A          168 -DASIN------------------------------HGNSGGALVNSL-G--ELMGINTLSFDKSNDGETPEGIGFAIPF  213 (237)
T ss_dssp             -CSCCC------------------------------TTCTTCEEECTT-C--CEEEEECCCCCCCTTSCCCCSCEEEEEH
T ss_pred             -cCccC------------------------------CCCchHHeeCCC-C--eEEEEEeeeeccCCCCcCcCceEEEEEH
Confidence             23345                              999999999643 3  49999999764321    1223566677


Q ss_pred             CCchhHHhhhhc
Q psy13815        375 TRYIGWISDTLD  386 (388)
Q Consensus       375 ~~~~~WI~~~i~  386 (388)
                      ....+++++.++
T Consensus       214 ~~i~~~~~~l~~  225 (237)
T 3lgi_A          214 QLATKIMDKLIR  225 (237)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            777777777654

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=99.61  E-value=1.5e-14  Score=134.46  Aligned_cols=167  Identities=19%  Similarity=0.192  Sum_probs=101.1

Q ss_pred             ceeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCC
Q psy13815        139 GHFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSI  217 (388)
Q Consensus       139 ~~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v  217 (388)
                      ...++|+||+++ ||||||||+.+      ...+.|.++..       ..+....+..||.       +|||||+|+.+.
T Consensus        45 ~~~GSG~iI~~~G~ILTaaHvv~~------~~~i~V~~~~g-------~~~~a~~~~~d~~-------~DlAlL~l~~~~  104 (332)
T 3num_A           45 VASGSGFIVSEDGLIVTNAHVVTN------KHRVKVELKNG-------ATYEAKIKDVDEK-------ADIALIKIDHQG  104 (332)
T ss_dssp             EEEEEEEEEETTTEEEECTTTCCT------TSEEEEEETTS-------CEEEEEEEEEETT-------TTEEEEEECCSS
T ss_pred             eeeEEEEEEeCCCEEEEChHHcCC------CCEEEEEECCC-------CEEEEEEEEecCC-------CCeEEEEEcCCC
Confidence            357999999998 99999999965      45667776532       3456666777764       699999999763


Q ss_pred             CCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccC
Q psy13815        218 QWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHE  297 (388)
Q Consensus       218 ~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~  297 (388)
                          .+.++.|+.......++.++++||+....        ..+....+.......+...+.      .....++++.  
T Consensus       105 ----~~~~~~l~~~~~~~~G~~v~~~G~p~g~~--------~~~~~g~vs~~~~~~~~~~~~------~~~~~~i~~d--  164 (332)
T 3num_A          105 ----KLPVLLLGRSSELRPGEFVVAIGSPFSLQ--------NTVTTGIVSTTQRGGKELGLR------NSDMDYIQTD--  164 (332)
T ss_dssp             ----CCCCCCBCCTTSCCTTCEEEEECC-------------CCEEEEEEEEC--------------------CCEEES--
T ss_pred             ----CCceeeecCcccCCCCCEEEEEECCCCCC--------cceeeeEEEeecccccccCcC------CCcCCEEEEE--
Confidence                35777887655446789999999986432        112222222222221211111      1112344442  


Q ss_pred             CCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCc
Q psy13815        298 QGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRY  377 (388)
Q Consensus       298 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~  377 (388)
                         ...|                              +|||||||+...+   .|+||++++...+    -++...+...
T Consensus       165 ---~~i~------------------------------~G~SGGPlv~~~G---~vvGI~s~~~~~g----~~~aip~~~i  204 (332)
T 3num_A          165 ---AIIN------------------------------YGNAGGPLVNLDG---EVIGINTLKVTAG----ISFAIPSDKI  204 (332)
T ss_dssp             ---SCCC------------------------------TTTTTSEEEETTS---CEEEEEEEEEETT----EEEEEEHHHH
T ss_pred             ---CCcC------------------------------CCCcHHHhhCCCC---cEEEEEeeEeccc----ceEEECHHHH
Confidence               2344                              8999999997442   3999999976432    2456666666


Q ss_pred             hhHHhhhh
Q psy13815        378 IGWISDTL  385 (388)
Q Consensus       378 ~~WI~~~i  385 (388)
                      ..||++.+
T Consensus       205 ~~~l~~~~  212 (332)
T 3num_A          205 KKFLTESH  212 (332)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            77776643

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=99.60  E-value=9.4e-16  Score=135.65  Aligned_cols=88  Identities=34%  Similarity=0.587  Sum_probs=76.7

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.||++++++++.++|+..+...    .++++||||+...++.+.|+|||||||++..+++|+|+||+|||.+|.   
T Consensus       140 ~~~~L~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~  215 (235)
T 4dgj_A          140 TADILQEADVPLLSNERCQQQMPEY----NITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYECALPN  215 (235)
T ss_dssp             BCSBCEEEEEEEECHHHHHHHCTTS----CCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTT
T ss_pred             cchhheEeEeeecCHHHhhhhccCc----cCCCCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCC
Confidence            3678999999999999999987532    478999999876677899999999999999999999999999999883   


Q ss_pred             --c--eeeEEEEeeccccc
Q psy13815         79 --T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~   93 (388)
                        +  ++++.|.+||.+.+
T Consensus       216 ~p~vyt~V~~~~~WI~~~i  234 (235)
T 4dgj_A          216 RPGVYARVSRFTEWIQSFL  234 (235)
T ss_dssp             CCEEEEEGGGTHHHHHTTC
T ss_pred             CCEEEeeHHHHHHHHHHHh
Confidence              2  88899999998754

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=99.60  E-value=7.4e-16  Score=137.64  Aligned_cols=89  Identities=28%  Similarity=0.409  Sum_probs=75.9

Q ss_pred             cCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC-----
Q psy13815          4 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP-----   78 (388)
Q Consensus         4 ~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~-----   78 (388)
                      ..|++++++++++++|+..+..     .+.+.||||+...+..+.|+|||||||++..+++|+|+||+|||.+|.     
T Consensus       147 ~~L~~~~~~i~~~~~C~~~~~~-----~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p  221 (250)
T 1aut_C          147 FVLNFIKIPVVPHNECSEVMSN-----MVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNY  221 (250)
T ss_dssp             SBCEEEEEEEECHHHHHHHCSS-----CCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCC
T ss_pred             ceeeEEEEEEecHHHhhHHhcc-----CCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCC
Confidence            4799999999999999988754     578999999865566899999999999998889999999999999983     


Q ss_pred             c--eeeEEEEeeccccccCCC
Q psy13815         79 T--SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~~~~~   97 (388)
                      +  ++|+.|.+||.+.+....
T Consensus       222 ~vyt~V~~y~~WI~~~~~~~~  242 (250)
T 1aut_C          222 GVYTKVSRYLDWIHGHIRDKE  242 (250)
T ss_dssp             EEEECGGGTHHHHHHHHC---
T ss_pred             EEEEEHHHHHHHHHHHhhccc
Confidence            2  888999999998776543

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=99.60  E-value=6.9e-16  Score=136.81  Aligned_cols=89  Identities=36%  Similarity=0.628  Sum_probs=76.8

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.||+++++++++++|+..+...    .+.+.||||+...++.+.|+|||||||++..+++|+|+||+|||.+|.   
T Consensus       141 ~~~~L~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~  216 (238)
T 3bg8_A          141 IQNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRE  216 (238)
T ss_dssp             CCSBCEEEECCEECHHHHHHHCTTS----CCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTT
T ss_pred             hhhhhcEeeEEEECHHHhhhhhcCC----CCCCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECCCCCCCC
Confidence            3678999999999999999877531    378899999876567899999999999999889999999999999883   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++++.|.+||.+.+.
T Consensus       217 ~p~vyt~V~~y~~WI~~~~~  236 (238)
T 3bg8_A          217 RPGVYTNVVEYVDWILEKTQ  236 (238)
T ss_dssp             CCEEEEEGGGGHHHHHHHHS
T ss_pred             CCcEEEeHHHHHHHHHHHHh
Confidence              2  888999999987654

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=99.59  E-value=1e-15  Score=135.68  Aligned_cols=88  Identities=38%  Similarity=0.661  Sum_probs=75.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.||+++++++++++|+..+...    .+.+.||||+...++.+.|+|||||||++..+++|+|+||+||+.+|.   
T Consensus       142 ~~~~L~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~  217 (237)
T 2f91_A          142 TPDVLQKVTVPLVSDEDCRADYGAD----EILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYGCARPG  217 (237)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHHCTT----TSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESSSSCTT
T ss_pred             ccceeeEEEEeEcCHHHhhhhhCCC----CcCCCeEEEecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecCCCCCCC
Confidence            3678999999999999999887521    477899999876567899999999999999889999999999999883   


Q ss_pred             --c--eeeEEEEeeccccc
Q psy13815         79 --T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~   93 (388)
                        +  ++++.|.+||.+++
T Consensus       218 ~p~vyt~V~~~~~WI~~~~  236 (237)
T 2f91_A          218 YPGVYTEVSYHVDWIKANA  236 (237)
T ss_dssp             CCEEEEEGGGSHHHHHHHC
T ss_pred             CCcEEEEHHHhHHHHHHhc
Confidence              2  88899999998754

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=99.59  E-value=1.2e-15  Score=134.93  Aligned_cols=88  Identities=24%  Similarity=0.468  Sum_probs=76.5

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .+..||++++++++.++|+..+..     .+.+.||||+...++.+.|+|||||||++..+++|+|+||+|||.+|.   
T Consensus       139 ~~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~  213 (235)
T 2wph_S          139 SALVLQYLRVPLVDRATCLRSTKF-----TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKG  213 (235)
T ss_dssp             BCSBCEEEEEEEECHHHHHHTCSS-----CCCTTEEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTT
T ss_pred             ccchheEeeeeeeCHHHhcCcccC-----CCCCCEEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCCCCCCC
Confidence            367899999999999999987654     578999999865566899999999999998889999999999999983   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++++.|.+||.+.+.
T Consensus       214 ~p~vyt~V~~~~~WI~~~~~  233 (235)
T 2wph_S          214 KYGIYTKVSRYVNWIKEKTK  233 (235)
T ss_dssp             CCEEEEEGGGGHHHHHHHCC
T ss_pred             CCeEEEEHHHhHHHHHHHHh
Confidence              2  888899999987664

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=99.59  E-value=6.9e-16  Score=140.84  Aligned_cols=87  Identities=30%  Similarity=0.520  Sum_probs=74.8

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccC---CCcCCCCCCCCCceEEee--CCcEEEEeeEEeecCC
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ---GGKDACWADSGGPLMLLG--AESTQVIGLVSTGIGS   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~---~~~~~C~gdsGgpl~~~~--~~~~~~~Gi~s~~~~~   77 (388)
                      ++.||+++++++++++|+..+..     .+++.||||+...   ...++|+|||||||++..  +++|+|+||+|||.+|
T Consensus       187 ~~~L~~~~v~i~~~~~C~~~~~~-----~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C  261 (289)
T 2bdy_A          187 PSVLQVVNLPIVERPVCKDSTRI-----RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGC  261 (289)
T ss_dssp             CSBCEEEEEEBCCHHHHHHTCSS-----CCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSS
T ss_pred             cccceEEEEEEECHHHhhccccC-----cCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCC
Confidence            67899999999999999987753     5789999998542   257899999999999987  7899999999999999


Q ss_pred             C-----c--eeeEEEEeecccccc
Q psy13815         78 P-----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 ~-----~--~~~~~~~~wi~~~~~   94 (388)
                      .     +  ++|+.|.+||.+++.
T Consensus       262 ~~~~~p~vyt~V~~y~~WI~~~i~  285 (289)
T 2bdy_A          262 DRDGKYGFYTHVFRLKKWIQKVID  285 (289)
T ss_dssp             SCTTCCEEEEETGGGHHHHHHHHH
T ss_pred             CCCCCCEEEEEHHHHHHHHHHHHH
Confidence            3     2  888999999987664

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=99.59  E-value=1.1e-15  Score=135.24  Aligned_cols=88  Identities=26%  Similarity=0.396  Sum_probs=76.3

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.||++.++++++++|+..+..     .+.+.||||+...++.+.|+|||||||++..+++|+|+||+||+.+|.    
T Consensus       133 ~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~  207 (234)
T 2asu_B          133 DTVLNVALLNVISNQECNIKHRG-----RVRESEMCTEGLLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRW  207 (234)
T ss_dssp             TTBCEEEEEEEECHHHHHHHTTT-----CCCTTEEEECCCSSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTC
T ss_pred             CccceEEEeeEEcHHHcccccCC-----ccCcceEeecCCCCCCeeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCC
Confidence            57899999999999999988754     578999999876567899999999999999999999999999999883    


Q ss_pred             -c--eeeEEEEeeccccccC
Q psy13815         79 -T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~   95 (388)
                       +  ++|+.|.+||.+.+..
T Consensus       208 p~vyt~V~~~~~WI~~~~~~  227 (234)
T 2asu_B          208 PAVFTRVSVFVDWIHKVMRL  227 (234)
T ss_dssp             CEEEEEGGGSHHHHHHHC--
T ss_pred             CeEEEEHHHHHHHHHHHhhc
Confidence             2  8889999999887653

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=99.59  E-value=1.4e-15  Score=135.11  Aligned_cols=90  Identities=26%  Similarity=0.389  Sum_probs=76.5

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      +..|+++++++++.++|+..+..     .+++.||||+...+..+.|+|||||||++..+++|+|+||+|||.+|.    
T Consensus       140 ~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~  214 (241)
T 2jkh_A          140 STRLKMLEVPYVDRNSCKLSSSF-----IITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGK  214 (241)
T ss_dssp             CSBCEEEEEEEECHHHHHHHCSS-----CCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTC
T ss_pred             CccccEeeeccccHHHhcccccC-----cCCCCeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCC
Confidence            57899999999999999987654     578999999865566899999999999998889999999999999883    


Q ss_pred             -c--eeeEEEEeeccccccCCC
Q psy13815         79 -T--SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~~~   97 (388)
                       +  ++++.|.+||.+.+....
T Consensus       215 p~vyt~V~~~~~WI~~~~~~~~  236 (241)
T 2jkh_A          215 YGIYTKVTAFLKWIDRSMKTRG  236 (241)
T ss_dssp             CEEEEEGGGGHHHHHHHTC---
T ss_pred             ceEEEEhHHHHHHHHHHhcccc
Confidence             2  888899999998876543

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=99.58  E-value=1.6e-15  Score=135.73  Aligned_cols=95  Identities=27%  Similarity=0.390  Sum_probs=79.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      +..|+++++++++.++|...+........+++.||||+...+..+.|+|||||||++..+++|+|+||+|||.+|.    
T Consensus       142 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~  221 (254)
T 2bz6_H          142 ALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGH  221 (254)
T ss_dssp             CSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTC
T ss_pred             ChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCC
Confidence            5789999999999999998775422223578999999866566899999999999998889999999999999883    


Q ss_pred             -c--eeeEEEEeeccccccCCC
Q psy13815         79 -T--SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~~~   97 (388)
                       +  ++++.|.+||.+.+....
T Consensus       222 p~vyt~V~~~~~WI~~~~~~~~  243 (254)
T 2bz6_H          222 FGVYTRVSQYIEWLQKLMRSEP  243 (254)
T ss_dssp             CEEEEEGGGGHHHHHHHHTSCC
T ss_pred             CeEEEEHHHHHHHHHHHHhccC
Confidence             2  888999999998886544

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=99.58  E-value=1.8e-15  Score=134.38  Aligned_cols=92  Identities=28%  Similarity=0.479  Sum_probs=76.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEe--eCCcEEEEeeEEeecCCCc-
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL--GAESTQVIGLVSTGIGSPT-   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~--~~~~~~~~Gi~s~~~~~~~-   79 (388)
                      ++.||++++++++.++|+..+........+.+.||||+...+..+.|+|||||||++.  .+++|+|+||+|||.+|.. 
T Consensus       141 ~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~  220 (242)
T 2qy0_B          141 AHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRG  220 (242)
T ss_dssp             CSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSS
T ss_pred             CccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCCC
Confidence            6789999999999999998775422222478899999875556899999999999995  4579999999999999942 


Q ss_pred             ----eeeEEEEeecccccc
Q psy13815         80 ----SVVQLLTRWTLDLEV   94 (388)
Q Consensus        80 ----~~~~~~~~wi~~~~~   94 (388)
                          ++|+.|.+||.+.+.
T Consensus       221 ~~vyt~V~~y~~WI~~~~~  239 (242)
T 2qy0_B          221 YGFYTKVLNYVDWIKKEME  239 (242)
T ss_dssp             CEEEEEGGGGHHHHHHHTT
T ss_pred             CcEEEEHHHHHHHHHHHhh
Confidence                888999999988764

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=99.57  E-value=2.4e-14  Score=132.26  Aligned_cols=168  Identities=14%  Similarity=0.182  Sum_probs=106.2

Q ss_pred             ceeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCC
Q psy13815        139 GHFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSI  217 (388)
Q Consensus       139 ~~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v  217 (388)
                      ...|+|+||+++ ||||+|||+.+      ...+.|.++..       +.+...-+..+       ..+|||||+++.+ 
T Consensus        41 ~~~gsG~iI~~~G~IlT~aHvv~~------~~~i~V~~~~g-------~~~~a~v~~~d-------~~~DlAllk~~~~-   99 (318)
T 1te0_A           41 RTLGSGVIMDQRGYIITNKHVIND------ADQIIVALQDG-------RVFEALLVGSD-------SLTDLAVLIIKAT-   99 (318)
T ss_dssp             EEEEEEEECSTTCEEEEEHHHHTT------CSEEEEECTTS-------CEEEEEEEEEE-------TTTTEEEEECCCS-
T ss_pred             CccEEEEEEeCCCEEEECHHHcCC------CCEEEEEeCCC-------CEEEEEEEEeC-------CCceEEEEEEeCC-
Confidence            468999999998 99999999966      34567766531       22333322222       2579999999876 


Q ss_pred             CCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccC
Q psy13815        218 QWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHE  297 (388)
Q Consensus       218 ~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~  297 (388)
                         ..+.|++|+.......++.++++||.....        .   .....+++..... .+.     ......++|+.  
T Consensus       100 ---~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~--------~---~~~~g~vs~~~~~-~~~-----~~~~~~~i~~d--  157 (318)
T 1te0_A          100 ---GGLPTIPINARRVPHIGDVVLAIGNPYNLG--------Q---TITQGIISATGRI-GLN-----PTGRQNFLQTD--  157 (318)
T ss_dssp             ---SCCCCCCCCTTCCCCTTCEEEEECCCSSSS--------C---CEEEEEEEECCCC-CCC-----TTCSCCSEEES--
T ss_pred             ---CCCceEEeeCccCCCCCCEEEEEEcCCCCC--------C---cEEeeEEeccccc-ccC-----CCCcCCEEEEC--
Confidence               346788888654446889999999764321        1   1222333322110 010     01234678863  


Q ss_pred             CCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCCCC----CCCCCeEEEe
Q psy13815        298 QGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCA----RPRLPGLYTR  373 (388)
Q Consensus       298 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~----~~~~p~v~t~  373 (388)
                         ...|                              +|+|||||+... |  .|+||++++..-.    .......+..
T Consensus       158 ---~~~~------------------------------~G~SGGPl~~~~-G--~vvGI~s~~~~~~~~~~~~~~~~~aip  201 (318)
T 1te0_A          158 ---ASIN------------------------------HGNSGGALVNSL-G--ELMGINTLSFDKSNDGETPEGIGFAIP  201 (318)
T ss_dssp             ---SCCC------------------------------TTTTTSEEECTT-C--CEEEEEECCSSSSSSCCSCCSCEEEEE
T ss_pred             ---CCCC------------------------------CCCCcCceECCC-C--eEEEEEeeeeccCCccccccceEEecc
Confidence               3456                              999999999743 3  4999999986421    1223456777


Q ss_pred             CCCchhHHhhhh
Q psy13815        374 LTRYIGWISDTL  385 (388)
Q Consensus       374 V~~~~~WI~~~i  385 (388)
                      +....+|+++.+
T Consensus       202 ~~~i~~~l~~l~  213 (318)
T 1te0_A          202 FQLATKIMDKLI  213 (318)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            777777777654

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=99.57  E-value=2.3e-15  Score=134.03  Aligned_cols=86  Identities=29%  Similarity=0.591  Sum_probs=75.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.||+++++++++++|+..++.     .+.+.||||+  ..+.+.|+|||||||++..+++|+|+||+|||.+|.   
T Consensus       151 ~~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~--~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c~~~~  223 (245)
T 1t8o_A          151 TPDRLQQASLPLLSNTNCKKYWGT-----KIKDAMICAG--ASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTS  223 (245)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHHGG-----GCCTTEEEEE--CSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTT
T ss_pred             CcchheEEEEeeEcchhhhHhhcC-----cCCCceEEcc--CCCCccCcccCcCCEEEEECCEEEEEEEEEeCCCCCCCC
Confidence            467899999999999999998865     5789999998  345799999999999999889999999999998883   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++|+.|.+||.+++.
T Consensus       224 ~p~vyt~V~~~~~WI~~~~~  243 (245)
T 1t8o_A          224 TPGVYARVTALVNWVQQTLA  243 (245)
T ss_dssp             SEEEEEEGGGTHHHHHHHHH
T ss_pred             CCEEEEEHHHHHHHHHHHHc
Confidence              2  888899999987654

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=99.57  E-value=1.6e-15  Score=140.77  Aligned_cols=92  Identities=28%  Similarity=0.474  Sum_probs=76.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEe--eCCcEEEEeeEEeecCCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL--GAESTQVIGLVSTGIGSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~--~~~~~~~~Gi~s~~~~~~-   78 (388)
                      .++.||++++++++.++|+..+........++++||||+...++.++|+|||||||++.  .+++|+|+||+|||.+|. 
T Consensus       229 ~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~  308 (329)
T 1md8_A          229 IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  308 (329)
T ss_dssp             BCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSS
T ss_pred             CCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCC
Confidence            36789999999999999998775422222478899999976567899999999999985  457999999999999994 


Q ss_pred             --c--eeeEEEEeeccccc
Q psy13815         79 --T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~   93 (388)
                        +  ++|+.|.+||.+++
T Consensus       309 ~~gvyT~V~~y~~WI~~~i  327 (329)
T 1md8_A          309 GYGFYTKVLNYVDWIKKEM  327 (329)
T ss_dssp             SCEEEEEGGGTHHHHHHHH
T ss_pred             CCcEEEEHHHHHHHHHHHH
Confidence              2  88999999998765

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=99.56  E-value=3.1e-15  Score=132.89  Aligned_cols=89  Identities=38%  Similarity=0.664  Sum_probs=76.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.||++.++++++++|+..+...    .+.+.||||+...++.+.|+|||||||++..+++|+|+||+||+.+|.    
T Consensus       142 ~~~L~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~  217 (241)
T 2any_A          142 QNILQKVNIPLVTNEECQKRYQDY----KITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQ  217 (241)
T ss_dssp             CSBCEEEEEEEECHHHHHTTSCTT----CSCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTC
T ss_pred             CchhheeEeEEeCHHHhhhHhccC----CCCcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCC
Confidence            678999999999999999876531    378899999866566899999999999999889999999999999883    


Q ss_pred             -c--eeeEEEEeeccccccC
Q psy13815         79 -T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~   95 (388)
                       +  ++++.|.+||.+.+..
T Consensus       218 p~vyt~V~~~~~WI~~~~~~  237 (241)
T 2any_A          218 PGVYTKVAEYMDWILEKTQS  237 (241)
T ss_dssp             CEEEEEGGGGHHHHHHHHSC
T ss_pred             CeEEEEHHHhHHHHHHHhhc
Confidence             2  8889999999887653

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=99.56  E-value=2.1e-15  Score=137.64  Aligned_cols=89  Identities=27%  Similarity=0.473  Sum_probs=74.3

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee--CCcEEEEeeEEeecCCC--
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG--AESTQVIGLVSTGIGSP--   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~--~~~~~~~Gi~s~~~~~~--   78 (388)
                      ++.||++++++++.++|+..+..   ...+.+.||||+...+..+.|+|||||||++..  +++|+|+||+|||.+|.  
T Consensus       152 ~~~L~~~~v~i~~~~~C~~~~~~---~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~  228 (290)
T 1fiw_A          152 SPMLQEARVDLIDLGLCNSTRWY---NGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARA  228 (290)
T ss_dssp             CSBCEEEEEEEECHHHHTSTTTT---TTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBT
T ss_pred             CceeeEEEEEEecHHHhcccccc---CCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCC
Confidence            56799999999999999864211   114789999998666668999999999999976  58999999999999993  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++|+.|.+||.+.+.
T Consensus       229 ~~p~vyt~V~~y~~WI~~~~~  249 (290)
T 1fiw_A          229 KRPGVYTSTWSYLNWIASKIG  249 (290)
T ss_dssp             TBCEEEEESGGGHHHHHHHHC
T ss_pred             CCCeEEEEHHHhHHHHHHHhC
Confidence               2  889999999988764

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=99.56  E-value=1e-14  Score=135.02  Aligned_cols=164  Identities=17%  Similarity=0.159  Sum_probs=105.5

Q ss_pred             eeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        140 HFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       140 ~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ..|+|+||+++ ||||+|||+.+      ...+.|.++..       +.+...-+..+       ..+|||||||+.+. 
T Consensus        47 ~~gsG~iI~~~G~IlT~aHvv~~------~~~i~V~~~~g-------~~~~a~v~~~d-------~~~DlAllkl~~~~-  105 (325)
T 1lcy_A           47 SNGSGFVVAADGLIVTNAHVVAD------RRRVRVRLLSG-------DTYEAVVTAVD-------PVADIATLRIQTKE-  105 (325)
T ss_dssp             EEEEEEEEETTTEEEECHHHHTT------CSEEEEECTTS-------CEEEEEEEEEE-------TTTTEEEEECCCSS-
T ss_pred             ccEEEEEEeCCCEEEECHHHcCC------CCEEEEEeCCC-------CEEEEEEEEEC-------CCCCEEEEEEcCCC-
Confidence            67999999998 99999999976      34677776532       22333322222       25799999998763 


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCC
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ  298 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~  298 (388)
                         .+.|++|+.......++.++++||+....           +.....+++...|......   .......++|+.   
T Consensus       106 ---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~-----------~~v~~G~vs~~~~~~~~~g---~~~~~~~~i~~d---  165 (325)
T 1lcy_A          106 ---PLPTLPLGRSADVRQGEFVVAMGSPFALQ-----------NTITSGIVSSAQRPARDLG---LPQTNVEYIQTD---  165 (325)
T ss_dssp             ---CCCCCCBCCGGGCCTTCEEEECCCTTSSS-----------SCCEEEEBCSCSCC------------CCCCEEES---
T ss_pred             ---CCceEEecccccCCCCCEEEEEECCCCCC-----------CcEEeEEEecccccccccC---CCCCCCCEEEEc---
Confidence               46788888653336789999999986532           1234556666666421110   012345788974   


Q ss_pred             CCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCch
Q psy13815        299 GGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYI  378 (388)
Q Consensus       299 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~  378 (388)
                        ...|                              +|+|||||+... |  .|+||++++..-    .......+....
T Consensus       166 --~~~~------------------------------~G~SGGPl~~~~-G--~vVGI~s~~~~~----g~~~aip~~~i~  206 (325)
T 1lcy_A          166 --AAID------------------------------FGNAGGPLVNLD-G--EVIGVNTMKVTA----GISFAIPSDRLR  206 (325)
T ss_dssp             --SCCS------------------------------TTTTTSEEEETT-S--CEEEEEEEEEET----TEEEEEEHHHHH
T ss_pred             --CCCC------------------------------CCCccccEECCC-C--EEEEEEeEeecC----CeeEEEEHHHHH
Confidence              3467                              999999999744 3  499999997531    124555555555


Q ss_pred             hHHhh
Q psy13815        379 GWISD  383 (388)
Q Consensus       379 ~WI~~  383 (388)
                      +|+++
T Consensus       207 ~~l~~  211 (325)
T 1lcy_A          207 EFLHR  211 (325)
T ss_dssp             HHTCC
T ss_pred             HHHHH
Confidence            55554

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=99.56  E-value=2.3e-15  Score=133.55  Aligned_cols=92  Identities=26%  Similarity=0.522  Sum_probs=75.3

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.||+++++++++++|+..+..   ...+.+.||||+...++.+.|+|||||||++..+++|+|+||+||+.+|.    
T Consensus       132 ~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~  208 (240)
T 1si5_H          132 DGLLRVAHLYIMGNEKCSQHHRG---KVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNR  208 (240)
T ss_dssp             CCBCEEEEEEEECGGGTCC----------CCTTEEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTC
T ss_pred             CCeeEEEEEeecCHHHhhhhhcC---CccCCCCEEeecCCCCCCEeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCC
Confidence            57899999999999999887643   11378899999876556899999999999999899999999999999883    


Q ss_pred             -c--eeeEEEEeeccccccCCC
Q psy13815         79 -T--SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~~~   97 (388)
                       +  ++++.|.+||.+.+....
T Consensus       209 p~vyt~V~~y~~WI~~~i~~~~  230 (240)
T 1si5_H          209 PGIFVRVAYYAKWIHKIILTYK  230 (240)
T ss_dssp             CEEEEEGGGGHHHHHHHHSSCC
T ss_pred             CcEEEEHHHHHHHHHHHHhccC
Confidence             2  888999999998876543

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=99.54  E-value=3.8e-15  Score=130.77  Aligned_cols=89  Identities=27%  Similarity=0.419  Sum_probs=75.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeecCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGIGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~~~~--   78 (388)
                      .++.|++++++++++++|+..+..    ..+.+.||||+...+..+.|+|||||||++.. .++|+|+||+|||.+|.  
T Consensus       126 ~~~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~  201 (224)
T 3beu_A          126 QQRYLLKANVPFVSDAACRSSSSF----ILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARK  201 (224)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSS----CCCGGGEEEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCT
T ss_pred             ccceeeEeeCcccCHHHhhhhcCC----ccCCCCeEEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCC
Confidence            367899999999999999987652    14678999998655668999999999999976 68999999999999983  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++++.|.+||.+++.
T Consensus       202 ~~p~vyt~V~~~~~WI~~~~~  222 (224)
T 3beu_A          202 GKYGVYTEVSTFASAIASAAR  222 (224)
T ss_dssp             TCCEEEEEHHHHHHHHHHHHT
T ss_pred             CCCeEEEEHHHHHHHHHHHHh
Confidence               2  788899999987664

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=99.54  E-value=4.4e-15  Score=135.12  Aligned_cols=92  Identities=25%  Similarity=0.355  Sum_probs=75.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.|+++.++++++++|+..+..   ...+.+.||||+...++.+.|+|||||||++..+++|+|+||+|||.+|.   
T Consensus       178 ~~~~L~~~~v~i~~~~~C~~~~~~---~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~  254 (283)
T 1yc0_A          178 YSSSLREALVPLVADHKCSSPEVY---GADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLH  254 (283)
T ss_dssp             CCSBCEEEEEEBCCHHHHTSTTTT---GGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTT
T ss_pred             cCchheEeEEEEECHHHhcCcccc---CCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCC
Confidence            367899999999999999864211   11478999999876566899999999999999889999999999999883   


Q ss_pred             --c--eeeEEEEeeccccccCC
Q psy13815         79 --T--SVVQLLTRWTLDLEVGG   96 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~~~   96 (388)
                        +  ++++.|.+||.+.+...
T Consensus       255 ~p~vyt~V~~y~~WI~~~i~~~  276 (283)
T 1yc0_A          255 KPGVYTRVANYVDWINDRIRPP  276 (283)
T ss_dssp             CCEEEEEGGGGHHHHHHHCC--
T ss_pred             CCeEEEEhhhHHHHHHHHhcCC
Confidence              2  88899999999887643

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=99.54  E-value=3e-15  Score=133.46  Aligned_cols=89  Identities=29%  Similarity=0.601  Sum_probs=74.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.||+++++++++++|++....   ...+.+.||||+...++.++|+|||||||++..+++|+|+||+|||.+|.    
T Consensus       150 ~~~L~~~~~~i~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~  226 (247)
T 1ddj_A          150 AGLLKEAQLPVIENKVCNRYEFL---NGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLGCARPNK  226 (247)
T ss_dssp             TTBCEEEEEEEECHHHHTSTTTT---TTCCCTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGGCCBBTTB
T ss_pred             CccceEEeeeecCHHHhcchhcc---CCCCcCCeEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECCCCCCCCC
Confidence            56899999999999999874221   11478899999875566899999999999998888999999999999883    


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       +  ++|+.|.+||.+++.
T Consensus       227 p~vyt~V~~y~~WI~~~~~  245 (247)
T 1ddj_A          227 PGVYVRVSRFVTWIEGVMR  245 (247)
T ss_dssp             CEEEEEGGGSHHHHHHHHH
T ss_pred             CEEEEEhHHhHHHHHHHhh
Confidence             2  888999999987664

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=99.54  E-value=4.2e-15  Score=132.55  Aligned_cols=90  Identities=26%  Similarity=0.375  Sum_probs=75.5

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.||++.+++++.++|+..+..   ...+++.||||+...+..+.|+|||||||++..+++|+|+||+|||.+|.    
T Consensus       144 ~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~  220 (248)
T 2r0l_A          144 SSSLREALVPLVADHKCSSPEVY---GADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHK  220 (248)
T ss_dssp             CSBCEEEEEEBCCHHHHTSTTTT---GGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTC
T ss_pred             CchheEEEEeeeCHHHhCCcccc---CCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCC
Confidence            67899999999999999864211   11478999999876556899999999999999889999999999999883    


Q ss_pred             -c--eeeEEEEeeccccccC
Q psy13815         79 -T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~   95 (388)
                       +  ++++.|.+||.+.+..
T Consensus       221 p~vyt~V~~~~~WI~~~~~~  240 (248)
T 2r0l_A          221 PGVYTRVANYVDWINDRIRP  240 (248)
T ss_dssp             CEEEEEGGGGHHHHHHHHC-
T ss_pred             CcEEEEHHHHHHHHHHHhcC
Confidence             2  8889999999987764

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=99.54  E-value=5.6e-15  Score=134.09  Aligned_cols=89  Identities=36%  Similarity=0.544  Sum_probs=74.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEe-eCCcEEEEeeEEeecCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL-GAESTQVIGLVSTGIGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~-~~~~~~~~Gi~s~~~~~~--   78 (388)
                      .++.||++++++++.++|+..+....  ..+++.||||+.. .+.++|+|||||||++. .+++|+|+||+|||.+|.  
T Consensus       180 ~~~~l~~~~~~i~~~~~C~~~~~~~~--~~~~~~~~Ca~~~-~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~  256 (278)
T 2olg_A          180 YSTIKQKLAVPVVHAEQCAKTFGAAG--VRVRSSQLCAGGE-KAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTE  256 (278)
T ss_dssp             CCSBCEEEEEEBCCGGGGGGGGSSTT--CCCCTTEEEECCT-TCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTT
T ss_pred             ccchhhcccccccCHHHHHHHhcccc--ccCCCceEeeecC-CCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCC
Confidence            36789999999999999998775321  1478999999864 35899999999999997 567899999999999883  


Q ss_pred             ---c--eeeEEEEeeccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~   93 (388)
                         +  ++|+.|.+||.+++
T Consensus       257 ~~p~vyt~V~~y~~WI~~~i  276 (278)
T 2olg_A          257 GWPGIYTKVGKYRDWIEGNI  276 (278)
T ss_dssp             CBCEEEEEGGGGHHHHHTTC
T ss_pred             CCCcEEeEHHHHHHHHHHhh
Confidence               2  88889999998765

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=99.54  E-value=4.9e-15  Score=131.88  Aligned_cols=90  Identities=27%  Similarity=0.475  Sum_probs=74.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCC----ccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGK----KINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~----~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~   78 (388)
                      +..|++++++++++++|+..+.....    ...+.+.||||+.  .+.+.|+|||||||++..+++|+|+||+|||.+|.
T Consensus       142 ~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~--~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~  219 (245)
T 2f9n_A          142 PFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCA  219 (245)
T ss_dssp             TCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECC--SSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSSS
T ss_pred             cccceEEEEEEcCHHHhhhhhcccccccccccccccccEeecC--CCCCcCCCCCCCceEEEECCEEEEEEEEEeCCCCC
Confidence            35799999999999999988753211    0146889999983  45789999999999999889999999999999883


Q ss_pred             -----c--eeeEEEEeecccccc
Q psy13815         79 -----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -----~--~~~~~~~~wi~~~~~   94 (388)
                           +  ++|+.|.+||.+.+.
T Consensus       220 ~~~~p~vyt~V~~y~~WI~~~~~  242 (245)
T 2f9n_A          220 QPNRPGIYTRVTYYLDWIHHYVP  242 (245)
T ss_dssp             BTTBCEEEEEGGGGHHHHHHHSC
T ss_pred             CCCCCeEEEEHHHHHHHHHHHhh
Confidence                 2  888999999988764

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=99.54  E-value=5.5e-15  Score=131.16  Aligned_cols=86  Identities=30%  Similarity=0.541  Sum_probs=75.1

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeecCCC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~~~~---   78 (388)
                      +..|+++++++++.++|+..++.     .+++.||||+...++.+.|+|||||||++.. +++|+|+||+|||.+|.   
T Consensus       146 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~  220 (241)
T 3ncl_A          146 ALILQKGEIRVINQTTCENLLPQ-----QITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRN  220 (241)
T ss_dssp             CSBCEEEEEEECCHHHHHHHSTT-----TCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTT
T ss_pred             CceeeEEeEEEECHHHhhhhccc-----CCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCC
Confidence            56799999999999999998765     5889999998766778999999999999754 68999999999999883   


Q ss_pred             --c--eeeEEEEeeccccc
Q psy13815         79 --T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~   93 (388)
                        +  ++++.|.+||.+.+
T Consensus       221 ~p~vyt~v~~y~~WI~~~~  239 (241)
T 3ncl_A          221 KPGVYTRLPLFRDWIKENT  239 (241)
T ss_dssp             CCEEEEESGGGHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHHh
Confidence              2  88999999998764

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=99.54  E-value=8e-15  Score=130.90  Aligned_cols=91  Identities=31%  Similarity=0.535  Sum_probs=76.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEe--eCCcEEEEeeEEeecCCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL--GAESTQVIGLVSTGIGSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~--~~~~~~~~Gi~s~~~~~~-   78 (388)
                      .++.|+++++++++.++|+..+...  ...+++.||||+...++.+.|+|||||||++.  .+++|+|+||+|||.+|. 
T Consensus       149 ~~~~L~~~~~~~~~~~~C~~~~~~~--~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~  226 (251)
T 3gov_B          149 FPETLMEIEIPIVDHSTCQKAYAPL--KKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGK  226 (251)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHTTTT--TCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSC
T ss_pred             CCccceEEeeEEECHHHhhhhhhhc--cCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCC
Confidence            3678999999999999999987532  12478899999876667899999999999997  468999999999999883 


Q ss_pred             ----c--eeeEEEEeecccccc
Q psy13815         79 ----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ----~--~~~~~~~~wi~~~~~   94 (388)
                          +  ++++.|.+||.+++.
T Consensus       227 ~~~p~vyt~V~~~~~WI~~~~~  248 (251)
T 3gov_B          227 KDRYGVYSYIHHNKDWIQRVTG  248 (251)
T ss_dssp             SSCCEEEEETTTTHHHHHHHHC
T ss_pred             CCCCEEEEEHHHhHHHHHHHhc
Confidence                2  888889999988764

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=99.53  E-value=8.2e-15  Score=130.53  Aligned_cols=90  Identities=26%  Similarity=0.374  Sum_probs=76.0

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.|+++.+++++.++|+..+..   ...+.+.||||+...+..+.|+|||||||++..+++|+|+||+|||.+|.   
T Consensus       150 ~~~~l~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~  226 (247)
T 3mhw_U          150 YPEQLKMTVVKLISHRECQQPHYY---GSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKD  226 (247)
T ss_dssp             CCSBCEEEEEEEECHHHHTSTTTT---GGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTT
T ss_pred             cchhheeeEEEEEChHHhcCcccc---CCcCCCCeEecCCCCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCC
Confidence            367899999999999999874321   12578999999876667899999999999999899999999999999883   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++++.|.+||.+.+.
T Consensus       227 ~p~vyt~V~~~~~WI~~~~~  246 (247)
T 3mhw_U          227 KPGVYTRVSHFLPWIRSHTK  246 (247)
T ss_dssp             BCEEEEEGGGCHHHHHHHTT
T ss_pred             CCeEEEEHHHHHHHHHHHhc
Confidence              2  888999999987653

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=99.53  E-value=5.4e-15  Score=139.57  Aligned_cols=89  Identities=31%  Similarity=0.615  Sum_probs=75.6

Q ss_pred             CCcCceEEEEeeeChhhhHhh--hhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeC----CcEEEEeeEEeec
Q psy13815          2 RSNILQKVALSVVSNQVCQAW--YQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA----ESTQVIGLVSTGI   75 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~--~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~----~~~~~~Gi~s~~~   75 (388)
                      .++.||+++++++++++|+..  +..     .+++.||||+...++.++|+|||||||++...    ++|+|+||+|||.
T Consensus       260 ~~~~L~~~~v~ii~~~~C~~~~~~~~-----~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~  334 (372)
T 1z8g_A          260 QAGVLQEARVPIISNDVCNGADFYGN-----QIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT  334 (372)
T ss_dssp             BCSBCEEEEEEEECHHHHTSTTTTTT-----CCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBS
T ss_pred             CCceeeEEEEEecChHHhCcchhcCC-----cCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCC
Confidence            367899999999999999864  322     57899999997666789999999999999864    8999999999999


Q ss_pred             CCC-----c--eeeEEEEeeccccccC
Q psy13815         76 GSP-----T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        76 ~~~-----~--~~~~~~~~wi~~~~~~   95 (388)
                      +|.     +  ++|+.|.+||.+.+..
T Consensus       335 ~C~~~~~p~vyt~V~~y~~WI~~~i~~  361 (372)
T 1z8g_A          335 GCALAQKPGVYTKVSDFREWIFQAIKT  361 (372)
T ss_dssp             SSSCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred             CCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence            983     2  8899999999887653

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=99.53  E-value=6.1e-15  Score=130.65  Aligned_cols=88  Identities=33%  Similarity=0.624  Sum_probs=74.9

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCC--cCCCCCCCCCceEEee-CCcEEEEeeEEeecCCC-
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGG--KDACWADSGGPLMLLG-AESTQVIGLVSTGIGSP-   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~--~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~~~~-   78 (388)
                      ++.||++++++++.++|+..+...    .+.+.||||+...+.  .+.|+|||||||++.. +++|+|+||+|||.+|. 
T Consensus       140 ~~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~  215 (238)
T 1ym0_A          140 PAVLRYVTLNITTNAFCDAVYTSD----TIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCAS  215 (238)
T ss_dssp             CSBCEEEEEEECCHHHHHHHCTTS----CCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSSS
T ss_pred             CccceEEEEEeeCHHHHhHhhccc----ccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCCC
Confidence            678999999999999999877531    478999999865444  7899999999999987 68999999999999883 


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++++.|.+||.+.+.
T Consensus       216 ~~p~vyt~v~~~~~WI~~~i~  236 (238)
T 1ym0_A          216 GYPGVYSRVGFHAGWITDTIT  236 (238)
T ss_dssp             SSCEEEEEHHHHHHHHHHHHH
T ss_pred             CCCcEEEEHHHhHHHHHHHhc
Confidence               2  888889999987654

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=99.53  E-value=5.7e-15  Score=132.02  Aligned_cols=88  Identities=28%  Similarity=0.531  Sum_probs=73.3

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCC------cCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGG------KDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~------~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ++.|+++++++++.++|+..+..   ...+.+.||||+...++      .+.|+|||||||++..+++|+|+||+||+.+
T Consensus       150 ~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~  226 (252)
T 1rtf_B          150 SERLKEAHVRLYPSSRCTSQHLL---NRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLG  226 (252)
T ss_dssp             CSBCEEEEEEECCGGGSSTTTTT---TCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             cchheEeeeEEecHHHhhhhhcc---CCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCC
Confidence            67899999999999999876532   11478899999865443      7899999999999988899999999999998


Q ss_pred             CC-----c--eeeEEEEeeccccc
Q psy13815         77 SP-----T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        77 ~~-----~--~~~~~~~~wi~~~~   93 (388)
                      |.     +  ++|+.|.+||.+.+
T Consensus       227 C~~~~~p~vyt~V~~y~~WI~~~~  250 (252)
T 1rtf_B          227 CGQKDVPGVYTKVTNYLDWIRDNM  250 (252)
T ss_dssp             SSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred             CCCCCCCeEEEEHHHHHHHHHHhc
Confidence            83     2  88899999998765

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=99.53  E-value=7.4e-15  Score=131.96  Aligned_cols=93  Identities=29%  Similarity=0.489  Sum_probs=78.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCC---CccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC-
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEG---KKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP-   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~---~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~-   78 (388)
                      +..|+++++++++..+|+..+....   ....+.+.||||+...++.+.|+|||||||++..+++|+|+||+|||.+|. 
T Consensus       141 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~  220 (261)
T 3gyl_B          141 PKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGA  220 (261)
T ss_dssp             TCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCSSC
T ss_pred             CccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCC
Confidence            6789999999999999999876321   112578999999876667899999999999999889999999999999883 


Q ss_pred             ----c--eeeEEEEeeccccccC
Q psy13815         79 ----T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 ----~--~~~~~~~~wi~~~~~~   95 (388)
                          +  ++++.|.+||.+.+..
T Consensus       221 ~~~p~vyt~v~~~~~WI~~~i~~  243 (261)
T 3gyl_B          221 RNRPGVYTLASSYASWIQSKVTE  243 (261)
T ss_dssp             TTCCEEEEEGGGGHHHHHHHHHH
T ss_pred             CCCCCEEEEHHHhHHHHHHHHhh
Confidence                2  8889999999987654

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=99.53  E-value=7.7e-15  Score=130.25  Aligned_cols=92  Identities=34%  Similarity=0.527  Sum_probs=76.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCC-ccccCCCeeEecccCCCcCCCCCCCCCceEEe--eCCcEEEEeeEEee-cCC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGK-KINVKESQMCAGHEQGGKDACWADSGGPLMLL--GAESTQVIGLVSTG-IGS   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~-~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~--~~~~~~~~Gi~s~~-~~~   77 (388)
                      .+..|+++++++++.++|+..+..... ...++++||||+...++.+.|+|||||||++.  .+++|+|+||+||| .+|
T Consensus       137 ~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C  216 (242)
T 3tvj_B          137 LARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC  216 (242)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESST
T ss_pred             cCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCC
Confidence            467899999999999999998764211 22478999999876667899999999999986  45799999999999 778


Q ss_pred             C-----c--eeeEEEEeeccccc
Q psy13815         78 P-----T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        78 ~-----~--~~~~~~~~wi~~~~   93 (388)
                      .     +  ++++.|.+||.+++
T Consensus       217 ~~~~~p~vyt~V~~y~~WI~~~i  239 (242)
T 3tvj_B          217 GEAGQYGVYTKVINYIPWIENII  239 (242)
T ss_dssp             TCTTCCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCCCeEEEEHHHHHHHHHHHH
Confidence            3     2  88899999998765

>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}

Probab=99.52  E-value=1.5e-13  Score=121.54  Aligned_cols=169  Identities=17%  Similarity=0.192  Sum_probs=101.8

Q ss_pred             ceeEEEEEeeCC--EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        139 GHFCGGTIIHEQ--WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       139 ~~~C~GtLI~~~--~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      ...++|+||+++  ||||+|||+.+      ...+.|.+...       ..+..+-+..++       .+|||||||+.+
T Consensus        62 ~~~GSGfiI~~~~G~IlTnaHvv~~------a~~i~V~~~dg-------~~~~a~vv~~d~-------~~DlAlLkv~~~  121 (245)
T 3sti_A           62 EGLGSGVIINASKGYVLTNNHVINQ------AQKISIQLNDG-------REFDAKLIGSDD-------QSDIALLQIQNP  121 (245)
T ss_dssp             --CCEEEEEETTTTEEEECGGGC----------CEEEECTTS-------CEEEEEEEEEET-------TTTEEEEEESSC
T ss_pred             cceEEEEEEeCCCCEEEEcHHHhCC------CCEEEEEECCC-------CEEEEEEEEecC-------CCCEEEEEeccC
Confidence            457999999998  99999999976      45567766432       234555555565       369999999865


Q ss_pred             CCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEecc
Q psy13815        217 IQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH  296 (388)
Q Consensus       217 v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~  296 (388)
                      .    .+.++.|........++.++++||.....           ......+++...+.. +     .......++|+. 
T Consensus       122 ~----~~~~~~l~~s~~~~~G~~v~aiG~P~g~~-----------~~vt~G~vs~~~~~~-~-----~~~~~~~~i~td-  179 (245)
T 3sti_A          122 S----KLTQIAIADSDKLRVGDFAVAVGNPFGLG-----------QTATSGIVSALGRSG-L-----NLEGLENFIQTD-  179 (245)
T ss_dssp             C----SCCCCCBCCGGGCCTTBEEEEEECGGGSC-----------CEEEEEEEEECSSCS-S-----CCTTCSSCEEES-
T ss_pred             C----CCceeeecCcCCCCCCCEEEEEECCCCCC-----------CcEEeeEEeeecccc-c-----CCCCccCEEEEc-
Confidence            3    35677787644436789999999864321           112223333322221 0     011223456652 


Q ss_pred             CCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCCCC-CCCCCeEEEeCC
Q psy13815        297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCA-RPRLPGLYTRLT  375 (388)
Q Consensus       297 ~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~-~~~~p~v~t~V~  375 (388)
                          ...|                              .|+|||||+... |  .|+||+++..... ..........+.
T Consensus       180 ----a~i~------------------------------~G~SGGPLvn~~-G--~vVGI~s~~~~~~~~~~g~~faIP~~  222 (245)
T 3sti_A          180 ----ASIN------------------------------RGNSGGALLNLN-G--ELIGINTAILAPGGGSVGIGFAIPSN  222 (245)
T ss_dssp             ----SCCC------------------------------TTTTTSEEECTT-S--CEEEEEECCC------CCCEEEEEHH
T ss_pred             ----CCcC------------------------------CCcchhHeecCC-C--eEEEEEEeEECCCCCcceEEEEEeHH
Confidence                2345                              999999999543 3  4999999976432 112235566777


Q ss_pred             CchhHHhhhhc
Q psy13815        376 RYIGWISDTLD  386 (388)
Q Consensus       376 ~~~~WI~~~i~  386 (388)
                      ...+++++.++
T Consensus       223 ~~~~~~~~l~~  233 (245)
T 3sti_A          223 MARTLAQQLID  233 (245)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            77777776653

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=99.52  E-value=1.1e-14  Score=128.69  Aligned_cols=92  Identities=22%  Similarity=0.305  Sum_probs=77.2

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.|+++++++++.++|+..+........+.++||||+...+..+.|+|||||||++.+    .|+||+||+.+|.   
T Consensus       135 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~----~l~Gi~S~g~~C~~~~  210 (235)
T 3h7t_A          135 YSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNG----TLVGVASYISSMPSEF  210 (235)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEETT----EEEEEECCCTTCCTTS
T ss_pred             hhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCccccCCCCCceeeCC----eEEEEEEecCCCCCCC
Confidence            467899999999999999998875333334889999999766678999999999999954    5999999999884   


Q ss_pred             -c--eeeEEEEeeccccccCCC
Q psy13815         79 -T--SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~~~   97 (388)
                       +  ++++.|.+||.+++....
T Consensus       211 p~vyt~v~~~~~WI~~~i~~~~  232 (235)
T 3h7t_A          211 PSVFLRVGYYVLDIKDIISGKV  232 (235)
T ss_dssp             CEEEEEGGGGHHHHHHHHTTCS
T ss_pred             CceEEEHHHHHHHHHHHHhCCc
Confidence             2  889999999998876543

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=99.52  E-value=9.5e-15  Score=128.90  Aligned_cols=88  Identities=26%  Similarity=0.443  Sum_probs=73.2

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeecCCC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~~~~---   78 (388)
                      ++.|+++++++++.++|+..+..   ...+.+.||||+...+..+.|+|||||||++.. +++|+|+||+|||.+|.   
T Consensus       135 ~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~  211 (232)
T 2oq5_A          135 QNHLRQAQVTLIDATTCNEPQAY---NDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPN  211 (232)
T ss_dssp             CSBCEEEEEEEECHHHHTSTTTT---TTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTT
T ss_pred             CceeeEeEEEEeCHHHcCCcccc---CCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCC
Confidence            57899999999999999875422   114788999998765667999999999999975 67899999999999883   


Q ss_pred             --c--eeeEEEEeeccccc
Q psy13815         79 --T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~   93 (388)
                        +  ++++.|.+||.+.+
T Consensus       212 ~p~vyt~V~~~~~WI~~~~  230 (232)
T 2oq5_A          212 KPGVYTRVTALRDWITSKT  230 (232)
T ss_dssp             BCEEEEETGGGHHHHHHHH
T ss_pred             CCeEEEEhHHhHHHHHHHh
Confidence              2  88889999998764

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=99.52  E-value=4.6e-15  Score=141.71  Aligned_cols=94  Identities=28%  Similarity=0.456  Sum_probs=72.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee--CCcEEEEeeEEeecCCCc
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG--AESTQVIGLVSTGIGSPT   79 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~--~~~~~~~Gi~s~~~~~~~   79 (388)
                      .++.||+++++++++++|+..+........++++||||+...++.++|+|||||||++..  +++|+|+||+|||.+|..
T Consensus       297 ~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~  376 (399)
T 1gpz_A          297 IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  376 (399)
T ss_dssp             CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTT
T ss_pred             cCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCC
Confidence            367899999999999999987653211124688999998755568999999999999864  579999999999999942


Q ss_pred             -----eeeEEEEeeccccccC
Q psy13815         80 -----SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        80 -----~~~~~~~~wi~~~~~~   95 (388)
                           ++|+.|.+||.+.+..
T Consensus       377 ~~~vyt~V~~y~~WI~~~~~~  397 (399)
T 1gpz_A          377 GYGFYTKVLNYVDWIKKEMEE  397 (399)
T ss_dssp             TEEEEEEGGGGHHHHHHHTC-
T ss_pred             CCeEEEEhHHhHHHHHHHhcc
Confidence                 8899999999887653

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=99.51  E-value=1e-14  Score=129.53  Aligned_cols=89  Identities=34%  Similarity=0.444  Sum_probs=73.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeec--CCC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGI--GSP   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~--~~~   78 (388)
                      .++.||++++++++.++|+..+..   ...+.+.||||+. .+..+.|+|||||||++.. +++|+|+||+|||.  +|.
T Consensus       141 ~~~~L~~~~~~i~~~~~C~~~~~~---~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~  216 (241)
T 1bru_P          141 SPDILQQGQLLVVDYATCSKPGWW---GSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCN  216 (241)
T ss_dssp             CCSBCEEEEEEEECHHHHTSTTTT---GGGCCTTEEEECC-SSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSS
T ss_pred             CCccceeCEEEEecHHHhCccccc---CCcCCCceEeecC-CCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCC
Confidence            367899999999999999875321   1147899999984 4567999999999999986 78999999999997  783


Q ss_pred             -----c--eeeEEEEeecccccc
Q psy13815         79 -----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -----~--~~~~~~~~wi~~~~~   94 (388)
                           +  ++++.|.+||.+++.
T Consensus       217 ~~~~p~vyt~V~~~~~WI~~~i~  239 (241)
T 1bru_P          217 YYHKPSVFTRVSNYIDWINSVIA  239 (241)
T ss_dssp             CTTCCEEEEEGGGSHHHHHHHHH
T ss_pred             CCCCCcEEEEHHHhHHHHHHHHh
Confidence                 2  888999999987653

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=99.51  E-value=7.2e-15  Score=141.12  Aligned_cols=87  Identities=30%  Similarity=0.520  Sum_probs=74.5

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccC---CCcCCCCCCCCCceEEee--CCcEEEEeeEEeecCC
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ---GGKDACWADSGGPLMLLG--AESTQVIGLVSTGIGS   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~---~~~~~C~gdsGgpl~~~~--~~~~~~~Gi~s~~~~~   77 (388)
                      ++.||++.|+++++.+|+..+..     .++++||||+...   ...++|+|||||||++..  +++|+|+||+|||.+|
T Consensus       322 ~~~L~~~~v~ii~~~~C~~~~~~-----~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C  396 (424)
T 3nxp_A          322 PSVLQVVNLPIVERPVCKDSTRI-----RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGC  396 (424)
T ss_dssp             CSBCEEEEEEBCCHHHHHHTCSS-----CCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCT
T ss_pred             CccceEEEeeEEcHHHhhhhccC-----cCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCC
Confidence            67899999999999999987654     5889999998542   235899999999999975  7899999999999999


Q ss_pred             C-----c--eeeEEEEeecccccc
Q psy13815         78 P-----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 ~-----~--~~~~~~~~wi~~~~~   94 (388)
                      .     +  ++|+.|.+||.+++.
T Consensus       397 ~~~~~pgVyT~Vs~y~~WI~~~i~  420 (424)
T 3nxp_A          397 DRDGKYGFYTHVFRLKKWIQKVID  420 (424)
T ss_dssp             TTCCSCEEEEECTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEEHHHHHHHHHHHHH
Confidence            3     2  889999999987653

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=99.51  E-value=1.2e-14  Score=131.65  Aligned_cols=90  Identities=26%  Similarity=0.379  Sum_probs=76.4

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      +..|+++.++++++++|...+...   ....+.++|++...+..++|+|||||||++..+++|+|+||+|||.+|.    
T Consensus       174 ~~~l~~~~~~i~~~~~C~~~~~~~---~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~  250 (276)
T 2vnt_A          174 PEQLKMTVVKLISHRECQQPHYYG---SEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDK  250 (276)
T ss_dssp             CSBCEEEEEEEECHHHHTSTTTTG---GGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTB
T ss_pred             chhheeeeeeEecHHHhhhhhccC---cccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCC
Confidence            567999999999999998866431   1456788888877777899999999999999999999999999999983    


Q ss_pred             -c--eeeEEEEeeccccccC
Q psy13815         79 -T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~   95 (388)
                       +  |+|+.|.+||++++..
T Consensus       251 P~vyt~V~~y~~WI~~~~~~  270 (276)
T 2vnt_A          251 PGVYTRVSHFLPWIRSHTKE  270 (276)
T ss_dssp             CEEEEEGGGGHHHHHHHHSC
T ss_pred             CEEEEEHHHHHHHHHHHhhh
Confidence             2  8899999999988754

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=99.51  E-value=8e-15  Score=129.05  Aligned_cols=84  Identities=33%  Similarity=0.593  Sum_probs=72.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.||+++++++++++|+..++.     .+.+.||||+...++.+.|+|||||||++.+    +|+||+|||.+|.   
T Consensus       135 ~~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~C~~~~  205 (228)
T 1fxy_A          135 YPDELQCLDAPVLSQAKCEASYPG-----KITSNMFCVGFLEGGKDSCQGDSGGPVVCNG----QLQGVVSWGDGCAQKN  205 (228)
T ss_dssp             CCSSCEEEEEEBCCHHHHHHHSTT-----TCCTTEEEESCTTCSCBCCTTCTTCEEEETT----EEEEEEEECSSSSBTT
T ss_pred             CCccceEEEEEEeCHHHhHhhcCC-----CCCCCEEEeccCCCCCccccCccccceEECC----EEEEEEEECCCCCCCC
Confidence            468899999999999999998764     5788999998655678999999999999965    8999999999883   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++++.|.+||.+++.
T Consensus       206 ~p~vyt~V~~y~~WI~~~~~  225 (228)
T 1fxy_A          206 KPGVYTKVYNYVKWIKNTIA  225 (228)
T ss_dssp             BCEEEEEGGGGHHHHHHHHH
T ss_pred             CCEEEEEhHHHHHHHHHHHh
Confidence              2  888999999987654

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=99.51  E-value=7.7e-15  Score=139.15  Aligned_cols=93  Identities=33%  Similarity=0.537  Sum_probs=76.4

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcC--CCccccCCCeeEecccCCCcCCCCCCCCCceEEee---CCcEEEEeeEEeecC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSE--GKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG---AESTQVIGLVSTGIG   76 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~--~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~---~~~~~~~Gi~s~~~~   76 (388)
                      .++.||+++|+++++++|+..+...  +....+.+.||||+.. .++++|+|||||||++..   +++|+|+||+|||.+
T Consensus       280 ~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~-~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~  358 (394)
T 2b9l_A          280 YSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGE-QGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIG  358 (394)
T ss_dssp             SCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCB-SSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTC
T ss_pred             ccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEeeCC-CCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCC
Confidence            3678999999999999999987642  1122478999999864 457999999999999963   468999999999999


Q ss_pred             CC-----c--eeeEEEEeeccccccC
Q psy13815         77 SP-----T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        77 ~~-----~--~~~~~~~~wi~~~~~~   95 (388)
                      |.     +  ++|+.|.+||.+.+..
T Consensus       359 C~~~~~PgVYT~V~~y~~WI~~~i~~  384 (394)
T 2b9l_A          359 CGDENVPGVYANVAHFRNWIDQEMQA  384 (394)
T ss_dssp             CCBSSSCEEEEEGGGGHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEHHHhHHHHHHHHHh
Confidence            93     2  8899999999887653

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=99.51  E-value=8.1e-15  Score=129.87  Aligned_cols=84  Identities=35%  Similarity=0.565  Sum_probs=71.8

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.||+++++++++++|+..+..     .+.+.||||+...++.+.|+|||||||++..    +|+||+||| .+|.  
T Consensus       144 ~~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~  214 (238)
T 1spj_A          144 FPDDLQCVDLKILPNDECKKAHVQ-----KVTDFMLCVGHLEGGKDTCVGDSGGPLMCDG----VLQGVTSWGYVPCGTP  214 (238)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSS-----CCCTTEEEEECTTCSSBCCTTCTTCEEEETT----EEEEEEEECCSSTTCT
T ss_pred             CcCcccEEEEeecCHHHhhhhccC-----CCCCCeEEeeCCCCCCCCCCCCCCCcEEEcC----EEEEEEEeCCCCCCCC
Confidence            367899999999999999987754     4789999998655678999999999999964    899999999 6783  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++|+.|.+||.+.+.
T Consensus       215 ~~p~vyt~V~~y~~WI~~~i~  235 (238)
T 1spj_A          215 NKPSVAVRVLSYVKWIEDTIA  235 (238)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCeEEEEHHHhHHHHHHHhh
Confidence               2  889999999987654

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=99.50  E-value=9.9e-15  Score=127.89  Aligned_cols=84  Identities=33%  Similarity=0.618  Sum_probs=72.0

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.||++++++++.++|+..++.     .+.+.||||+...++.+.|+|||||||++.+    +|+||+|||.+|.   
T Consensus       130 ~~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~C~~~~  200 (222)
T 1hj8_A          130 DSNKLQCLNIPILSYSDCNNSYPG-----MITNAMFCAGYLEGGKDSCQGDSGGPVVCNG----ELQGVVSWGYGCAEPG  200 (222)
T ss_dssp             CTTBCEEEEEEBCCHHHHHHHSTT-----CCCTTEEEESCTTSSCBCCTTCTTCEEEETT----EEEEEEEECSSSSCTT
T ss_pred             CCceeEEEEEEEcCHHHhhhhccC-----CCCCCeEEeccCCCCCccCCCCcccceEECC----EEEEEEeecCCCCCCC
Confidence            367899999999999999988764     5789999998655668999999999999964    7999999999883   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++++.|.+||.+++.
T Consensus       201 ~p~vyt~v~~~~~WI~~~~~  220 (222)
T 1hj8_A          201 NPGVYAKVCIFNDWLTSTMA  220 (222)
T ss_dssp             CCEEEEEGGGGHHHHHHHHH
T ss_pred             cCcEEEEhHHhHHHHHHHhh
Confidence              2  888999999987653

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.50  E-value=1.2e-14  Score=127.41  Aligned_cols=83  Identities=30%  Similarity=0.619  Sum_probs=71.4

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.|+++++++++.++|+..++.     .+.+.||||+...++.+.|+|||||||++.+    .|+||+|||.+|.    
T Consensus       132 ~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~GI~S~g~~C~~~~~  202 (223)
T 3mfj_A          132 PDVLKCLKAPILSDSSCKSAYPG-----QITSNMFCAGYLEGGKDSCQGDSGGPVVCSG----KLQGIVSWGSGCAQKNK  202 (223)
T ss_dssp             CSSCEEEEEEBCCHHHHHHHSTT-----TCCTTEEEESCTTSSCBCCTTCTTCEEEETT----EEEEEEEECSSSSBTTB
T ss_pred             cchheEEEEEEeCHHHhhhhhcC-----cCCCCEEEccCCCCCCCcCCCCcccceEECC----EEEEEEEECCCCCCCCC
Confidence            67899999999999999988764     5789999998655678999999999999954    7999999999883    


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       +  ++++.|.+||.+.+.
T Consensus       203 p~vyt~V~~~~~WI~~~i~  221 (223)
T 3mfj_A          203 PGVYTKVCNYVSWIKQTIA  221 (223)
T ss_dssp             CEEEEEGGGGHHHHHHHHH
T ss_pred             CeEEEEHHHhHHHHHHHHh
Confidence             2  888899999987653

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=99.50  E-value=1.1e-14  Score=127.72  Aligned_cols=83  Identities=39%  Similarity=0.574  Sum_probs=70.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~~--   78 (388)
                      .++.||++++++++.++|+..+..     .+.+.||||+...++.+.|+|||||||++.+    +|+||+|||. +|.  
T Consensus       131 ~~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~----~l~Gi~S~g~~~C~~~  201 (223)
T 2bdg_A          131 MPTVLQCVNVSVVSEEVCSKLYDP-----LYHPSMFCAGGGQDQKDSCNGDSGGPLICNG----YLQGLVSFGKAPCGQV  201 (223)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHSTT-----TCCTTEEEECCSTTCCBCCTTCTTCEEEETT----EEEEEEEECCSSTTCT
T ss_pred             CCCcceEEEEEEeCHHHhhhhhCC-----CCCCCeEeccCCCCCCCcCCCCCCchheEcc----EEEEEEEecCCCCCCC
Confidence            467899999999999999998764     5788999998655668999999999999965    8999999996 683  


Q ss_pred             ---c--eeeEEEEeeccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~   93 (388)
                         +  ++++.|.+||.+++
T Consensus       202 ~~p~vyt~V~~~~~WI~~~i  221 (223)
T 2bdg_A          202 GVPGVYTNLCKFTEWIEKTV  221 (223)
T ss_dssp             TCCEEEECGGGTHHHHHHHH
T ss_pred             CCCcEEEEHHHhHHHHHHHh
Confidence               2  88889999998764

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=99.50  E-value=1.7e-14  Score=129.39  Aligned_cols=87  Identities=30%  Similarity=0.520  Sum_probs=74.2

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccC---CCcCCCCCCCCCceEEee--CCcEEEEeeEEeecCC
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ---GGKDACWADSGGPLMLLG--AESTQVIGLVSTGIGS   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~---~~~~~C~gdsGgpl~~~~--~~~~~~~Gi~s~~~~~   77 (388)
                      +..||++++++++..+|+..+..     .+.+.||||+...   ...+.|+|||||||++..  +++|+|+||+|||.+|
T Consensus       157 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C  231 (259)
T 3rm2_H          157 PSVLQVVNLPIVERPVCKDSTRI-----RITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGC  231 (259)
T ss_dssp             CSBCEEEEEEBCCHHHHHHTCSS-----CCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSS
T ss_pred             cccceEEEEEEeCHHHhhhhhcc-----cCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCC
Confidence            67899999999999999987754     5789999998532   235899999999999987  7899999999999998


Q ss_pred             C-----c--eeeEEEEeecccccc
Q psy13815         78 P-----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 ~-----~--~~~~~~~~wi~~~~~   94 (388)
                      .     +  ++|+.|.+||.+++.
T Consensus       232 ~~~~~p~vyt~V~~~~~WI~~~i~  255 (259)
T 3rm2_H          232 DRDGKYGFYTHVFRLKKWIQKVID  255 (259)
T ss_dssp             SCTTCCEEEEETGGGHHHHHHHHH
T ss_pred             CCCCCCeEEEEHHHhHHHHHHHHH
Confidence            3     2  888999999987653

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=99.49  E-value=1.4e-14  Score=134.91  Aligned_cols=94  Identities=26%  Similarity=0.388  Sum_probs=74.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCC----CccccCCCeeEecccCCCcCCCCCCCCCceEEee--CC-cEEEEeeEEee
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEG----KKINVKESQMCAGHEQGGKDACWADSGGPLMLLG--AE-STQVIGLVSTG   74 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~----~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~--~~-~~~~~Gi~s~~   74 (388)
                      .+..||++++++++.++|+..+....    ....++++||||+... +.++|+|||||||++..  .+ +|+|+||+|||
T Consensus       223 ~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~-~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g  301 (333)
T 1elv_A          223 RAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEK-GMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWG  301 (333)
T ss_dssp             SCSBCEEEEEEEECHHHHHTC----------CCCCCTTEEEEECST-TCBCCTTCTTCEEEEECSSCTTCEEEEEEEEEC
T ss_pred             cCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeECccCCC-CCCcCcCcCCCceEEEECCCCcEEEEEEEEeeC
Confidence            46789999999999999998664311    1124789999998654 68999999999999974  34 89999999999


Q ss_pred             cCCCc----eeeEEEEeeccccccCC
Q psy13815         75 IGSPT----SVVQLLTRWTLDLEVGG   96 (388)
Q Consensus        75 ~~~~~----~~~~~~~~wi~~~~~~~   96 (388)
                      .+|..    ++|+.|.+||.+++...
T Consensus       302 ~~C~~~~vyt~V~~y~~WI~~~~~~~  327 (333)
T 1elv_A          302 PQCGTYGLYTRVKNYVDWIMKTMQEN  327 (333)
T ss_dssp             SSTTSEEEEEEGGGGHHHHHHHHHHT
T ss_pred             CCCCCCcEEeEHHHHHHHHHHHHhcc
Confidence            99942    88899999999877543

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=99.49  E-value=2.2e-14  Score=137.14  Aligned_cols=93  Identities=33%  Similarity=0.526  Sum_probs=76.4

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCC-CccccCCCeeEecccCCCcCCCCCCCCCceEEee--CCcEEEEeeEEee-cCC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEG-KKINVKESQMCAGHEQGGKDACWADSGGPLMLLG--AESTQVIGLVSTG-IGS   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~-~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~--~~~~~~~Gi~s~~-~~~   77 (388)
                      .++.||+++|+++++++|+..+.... ....++++||||+...++.++|+|||||||++..  +++|+|+||+||| .+|
T Consensus       298 ~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C  377 (403)
T 1zjk_A          298 LARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC  377 (403)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC
T ss_pred             cCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCC
Confidence            46789999999999999998875421 1114789999999766678999999999999974  5799999999999 788


Q ss_pred             C-----c--eeeEEEEeecccccc
Q psy13815         78 P-----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 ~-----~--~~~~~~~~wi~~~~~   94 (388)
                      .     +  ++|+.|.+||.+++.
T Consensus       378 ~~~~~p~vyt~V~~y~~WI~~~i~  401 (403)
T 1zjk_A          378 GEAGQYGVYTKVINYIPWIENIIS  401 (403)
T ss_dssp             --CCCCEEEEEGGGGHHHHHHHHT
T ss_pred             CCCCCCeEEEEHHHHHHHHHHHHh
Confidence            3     2  888999999987664

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=99.49  E-value=1.4e-14  Score=128.44  Aligned_cols=89  Identities=30%  Similarity=0.429  Sum_probs=73.4

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec--CCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI--GSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~--~~~-   78 (388)
                      .++.||++.+++++.++|+..+..   ...+.+.||||+. .+..+.|+|||||||++..+++|+|+||+||+.  +|. 
T Consensus       141 ~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~  216 (240)
T 1gvk_B          141 LAQTLQQAYLPTVDYAICSSSSYW---GSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNV  216 (240)
T ss_dssp             BCSBCEEEECCEECHHHHTSTTTT---GGGCCTTEEEECC-SSSCBCCTTCTTCEEEEEETTEEEEEEEEEECBTTBSSC
T ss_pred             cchhccEEEEEEEcHHHhcccccc---CccCCcceEeecC-CCCCcccCCCCcCceEEEECCcEEEEEEEEEeCCCCCCC
Confidence            367899999999999999875321   1147899999984 456899999999999998889999999999985  783 


Q ss_pred             ----c--eeeEEEEeecccccc
Q psy13815         79 ----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ----~--~~~~~~~~wi~~~~~   94 (388)
                          +  ++|+.|.+||.+++.
T Consensus       217 ~~~p~vyt~V~~~~~WI~~~i~  238 (240)
T 1gvk_B          217 TRKPTVFTRVSAYISWINNVIA  238 (240)
T ss_dssp             TTCCEEEEEGGGSHHHHHHHHH
T ss_pred             CCCCcEEEeHHHHHHHHHHHHh
Confidence                2  888999999987653

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=99.49  E-value=1.6e-14  Score=126.72  Aligned_cols=84  Identities=33%  Similarity=0.543  Sum_probs=71.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.||++.++++++++|+..++.     .+++.||||+...++.+.|+|||||||++.+    +|+||+||| .+|.  
T Consensus       130 ~~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~----~l~Gi~S~g~~~C~~~  200 (223)
T 1lo6_A          130 FPDTIQCAYIHLVSREECEHAYPG-----QITQNMLCAGDEKYGKDSCQGDSGGPLVCGD----HLRGLVSWGNIPCGSK  200 (223)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHSTT-----TCCTTEEEEECTTTCCBCCTTTTTCEEEETT----EEEEEEEECCSSCCCS
T ss_pred             cCceeeEEEEEEeCHHHhhhhhCC-----CCCCCeEEeecCCCCCeeccccCCCcEEeCC----EEEEEEeeCCCCCCCC
Confidence            467899999999999999998764     5789999998765668999999999999964    799999999 6783  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++++.|.+||.+++.
T Consensus       201 ~~p~vyt~V~~~~~WI~~~i~  221 (223)
T 1lo6_A          201 EKPGVYTNVCRYTNWIQKTIQ  221 (223)
T ss_dssp             SSCEEEEEGGGGHHHHHHHHC
T ss_pred             CCCcEEEEHHHHHHHHHHHhc
Confidence               2  888999999987664

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=99.49  E-value=1.1e-14  Score=129.06  Aligned_cols=83  Identities=37%  Similarity=0.585  Sum_probs=71.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CCC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GSP---   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~~---   78 (388)
                      ++.||+++++++++++|+..+..     .+++.||||+...++.+.|+|||||||++..    +|+||+|||. +|.   
T Consensus       144 ~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~~  214 (237)
T 2zch_P          144 PKKLQCVDLHVISNDVCAQVHPQ-----KVTKFMLCAGRWTGGKSTCSGDSGGPLVCNG----VLQGITSWGSEPCALPE  214 (237)
T ss_dssp             CSBCEEEEEEEECHHHHHHHCSS-----BCCTTEEEEECTTCSCBCCTTCTTCEEESSS----SEEEEEEECCSSTTCTT
T ss_pred             CcccEEeEEEEeCHHHhcccccC-----CCCceEEeecCCCCCCcccCCCccCeEEECC----EEEEEEEeCcCCCCCCC
Confidence            67899999999999999987764     5788999998766668999999999999864    8999999998 683   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++++.|.+||.+++.
T Consensus       215 ~p~vyt~V~~~~~WI~~~i~  234 (237)
T 2zch_P          215 RPSLYTKVVHYRKWIKDTIV  234 (237)
T ss_dssp             CCEEEEEGGGGHHHHHHHHH
T ss_pred             CCcEEEEHHHHHHHHHHHHh
Confidence              2  888999999988764

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=99.48  E-value=2.3e-14  Score=125.77  Aligned_cols=84  Identities=35%  Similarity=0.523  Sum_probs=71.7

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.|+++++++++.++|++.+..     .+.+.||||+...+..+.|+|||||||++.+    .|+||+||| .+|.  
T Consensus       130 ~~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~  200 (224)
T 2qxi_A          130 FPSDLMCVDVKLISPQDCTKVYKD-----LLENSMLCAGIPDSKKNACNGDSGGPLVCRG----TLQGLVSWGTFPCGQP  200 (224)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHHGG-----GCCTTEEEEECTTCCCBCCTTCTTCEEEETT----EEEEEEEECCSSSCCT
T ss_pred             CChhheEEEeeecCHHHhhHHhcC-----cCCCCeEEecCCCCCCccCCCCccccEEECC----EEEEEEEeCCCCCCCC
Confidence            367899999999999999998864     5789999998655668999999999999954    799999999 6783  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++++.|.+||.+++.
T Consensus       201 ~~p~vyt~V~~~~~WI~~~~~  221 (224)
T 2qxi_A          201 NDPGVYTQVCKFTKWINDTMK  221 (224)
T ss_dssp             TCCEEEEEGGGSHHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHHh
Confidence               2  888999999987653

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=99.48  E-value=1.4e-14  Score=128.45  Aligned_cols=87  Identities=21%  Similarity=0.444  Sum_probs=72.4

Q ss_pred             CCcCceEEEEeeeChhhhHh--hhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC
Q psy13815          2 RSNILQKVALSVVSNQVCQA--WYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~--~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~   78 (388)
                      .++.||++++++++.++|+.  .+..     .+.+.||||+...++.+.|+|||||||++..  .|+|+||+||+ .+|.
T Consensus       134 ~~~~L~~~~~~~~~~~~C~~~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~--~~~l~Gi~S~g~~~C~  206 (240)
T 2zgc_A          134 LSRVLRELDLQVLDTRMCNNSRFWNG-----SLSPSMVCLAADSKDQAPCKGDSGGPLVCGK--GRVLAGVLSFSSRVCT  206 (240)
T ss_dssp             BCSBCEEEEEEECCHHHHTSTTTTTT-----CCCTTEEEEECSSTTCBCCTTCTTCEEEETT--TTEEEEEECCCCSSTT
T ss_pred             cCceeeeeeeeecCHHHhCCccccCC-----CCCCceEeeccCCCCCccCCCCccCeeEECC--CCEEEEEEEECCCCCC
Confidence            46789999999999999987  4433     4788999998655568999999999999954  48999999999 6783


Q ss_pred             -----c--eeeEEEEeeccccccC
Q psy13815         79 -----T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 -----~--~~~~~~~~wi~~~~~~   95 (388)
                           +  ++|+.|.+||.+++..
T Consensus       207 ~~~~p~vyt~V~~y~~WI~~~~~~  230 (240)
T 2zgc_A          207 DIFKPPVATAVAPYVSWIRKVTGR  230 (240)
T ss_dssp             CTTSCCEEEESGGGHHHHHHHHCC
T ss_pred             CCCCCcEEEEHHHhHHHHHHHHhh
Confidence                 2  8899999999887754

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.48  E-value=2.4e-14  Score=125.48  Aligned_cols=83  Identities=30%  Similarity=0.619  Sum_probs=72.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.|+++++++++.++|+..++.     .+.+.||||+...++.+.|+|||||||++..    +|+||+||+.+|.    
T Consensus       132 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~----~l~Gi~S~g~~c~~~~~  202 (223)
T 4i8h_A          132 PDVLKCLKAPILSDSSCKSAYPG-----QITSNMFCAGYLEGGKDSCQGDSGGPVVCSG----KLQGIVSWGSGCAQKNK  202 (223)
T ss_dssp             CSSCEEEEEEBCCHHHHHHHSTT-----TCCTTEEEESCTTSSCBCCTTCTTCEEEETT----EEEEEEEECSSSSCTTC
T ss_pred             cccceEEEeeecCHHHHHHhhCC-----CCCCCeEeccCCCCCCccCCCCCCCcEEECC----EEEEEEEcCCCCCCCCC
Confidence            57799999999999999998765     5789999998666778999999999999965    8999999999883    


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       .  ++++.|.+||.+++.
T Consensus       203 p~vyt~v~~~~~WI~~~i~  221 (223)
T 4i8h_A          203 PGVYTKVCNYVSWIKQTIA  221 (223)
T ss_dssp             CEEEEEGGGGHHHHHHHHH
T ss_pred             CeEEEEHHHHHHHHHHHHh
Confidence             2  888999999987664

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=99.48  E-value=2e-14  Score=128.46  Aligned_cols=88  Identities=32%  Similarity=0.381  Sum_probs=73.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec--CCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI--GSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~--~~~-   78 (388)
                      .++.|+++.+++++.++|+..+..   ...+++.||||+. .+..+.|+|||||||++..+++|+|+||+|||.  +|. 
T Consensus       153 ~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~~~C~~  228 (251)
T 1pyt_D          153 IAAELQQGLQPVVDYATCSQRDWW---GTTVKETMVCAGG-DGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNT  228 (251)
T ss_dssp             CCSBCBCCEEECBCHHHHTSTTTT---TTTCCTTEEEECC-SCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTB
T ss_pred             cccchheeEeEeeCHHHcchhhcc---CCCcCCCeEEecC-CCCCccCCCCCCCceEEEECCCEEEEEEEEECCCCCCCC
Confidence            357899999999999999875421   1147899999985 456799999999999998888999999999996  673 


Q ss_pred             ----c--eeeEEEEeeccccc
Q psy13815         79 ----T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ----~--~~~~~~~~wi~~~~   93 (388)
                          +  ++|+.|.+||.+.+
T Consensus       229 ~~~p~vyt~V~~~~~WI~~~~  249 (251)
T 1pyt_D          229 FKKPTVFTRVSAYIDWINQKL  249 (251)
T ss_dssp             TTBCEEEEEGGGGHHHHHHHT
T ss_pred             CCCCeEEEEHHHHHHHHHHHh
Confidence                2  88899999998765

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=99.47  E-value=2.2e-14  Score=126.99  Aligned_cols=84  Identities=32%  Similarity=0.595  Sum_probs=71.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.||++.+++++.++|++.|..     .+++.||||+...++.+.|+|||||||++.+    +|+||+||| .+|.  
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~  213 (237)
T 1ao5_A          143 KPDDLQCVFITLLPNENCAKVYLQ-----KVTDVMLCAGEMGGGKDTCRDDSGGPLICDG----ILQGTTSYGPVPCGKP  213 (237)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSS-----CCCTTEEEEECTTCSCBCCTTCTTCEEEETT----EEEEEEEECCSSTTCT
T ss_pred             CCCcccEEEEEecChhHhhhhhcc-----cCCCCEEEEccCCCCCCCCCCCCcceEEECC----EEeEEEeEcCCCCCCC
Confidence            467899999999999999998764     5789999998434567999999999999954    899999999 7883  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++++.|.+||.+.+.
T Consensus       214 ~~p~vyt~V~~~~~WI~~~~~  234 (237)
T 1ao5_A          214 GVPAIYTNLIKFNSWIKDTMM  234 (237)
T ss_dssp             TCCEEEECGGGGHHHHHHHHH
T ss_pred             CCCcEEEEHHHHHHHHHHHHh
Confidence               2  888899999987654

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=99.47  E-value=1.4e-14  Score=128.10  Aligned_cols=84  Identities=36%  Similarity=0.617  Sum_probs=71.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.||+++++++++++|+..|..     .+.+.||||+...++.+.|+|||||||++.+    +|+||+||| .+|.  
T Consensus       141 ~~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~  211 (235)
T 1ton_A          141 VSHDLQCVNIHLLSNEKCIETYKD-----NVTDVMLCAGEMEGGKDTCAGDSGGPLICDG----VLQGITSGGATPCAKP  211 (235)
T ss_dssp             CCSBCEEEEEEEECGGGCGGGGST-----TGGGGEEEEECTTCSCBCCTTCTTCEEEETT----EEEEEECCCCSSCSCT
T ss_pred             cCccceEEEEEEeCHHHHHHHhcC-----cCCCCeEeeccCCCCCcCCCCCCccccEECC----EEEEEEeeCCCCCCCC
Confidence            367899999999999999988764     5788999998655668999999999999954    899999999 5683  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++++.|.+||.+++.
T Consensus       212 ~~p~vyt~V~~~~~WI~~~~~  232 (235)
T 1ton_A          212 KTPAIYAKLIKFTSWIKKVMK  232 (235)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHHc
Confidence               2  888999999987664

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=99.47  E-value=2.5e-14  Score=125.77  Aligned_cols=83  Identities=31%  Similarity=0.622  Sum_probs=71.0

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.||++++++++.++|+..++.     .+.+.||||+. ..+.+.|+|||||||++.+    +|+||+||| .+|.  
T Consensus       134 ~~~~L~~~~~~i~~~~~C~~~~~~-----~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~  203 (227)
T 2psx_A          134 FPKVLQCLNISVLSQKRCEDAYPR-----QIDDTMFCAGD-KAGRDSCQGDSGGPVVCNG----SLQGLVSWGDYPCARP  203 (227)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHSTT-----TCCTTEEEECC-STTCBCCTTCTTCEEEETT----EEEEEEEECCSSTTCT
T ss_pred             CCchheEEEEEecCHhHhhhhcCC-----CCCCCEEcccC-CCCCccCCCCCCcceeeCC----EEEEEEeecCCCCCCC
Confidence            367899999999999999998764     57899999985 4567999999999999965    899999999 6783  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         +  ++++.|.+||.+.+.
T Consensus       204 ~~p~vyt~V~~~~~WI~~~~~  224 (227)
T 2psx_A          204 NRPGVYTNLCKFTKWIQETIQ  224 (227)
T ss_dssp             TCCEEEEEGGGCHHHHHHHHH
T ss_pred             CCCcEEEEHHHhHHHHHHHHh
Confidence               2  888999999987654

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=99.47  E-value=2.3e-14  Score=125.83  Aligned_cols=82  Identities=29%  Similarity=0.509  Sum_probs=69.5

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.||+++++++++++|+..|+.     .+.+.||||+... +.+.|+|||||||++.+    +|+||+||| .+|.  
T Consensus       135 ~~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~-~~~~C~GDSGgPL~~~~----~l~GI~S~g~~~C~~~  204 (225)
T 1npm_A          135 FPNTLNCAEVKIYSQNKCERAYPG-----KITEGMVCAGSSN-GADTCQGDSGGPLVCDG----MLQGITSWGSDPCGKP  204 (225)
T ss_dssp             CCSBCEEEEEEECCHHHHHHHSTT-----TCCTTEEEEECTT-CCBCCTTCTTCEEEETT----EEEEEEEECCSSSCBT
T ss_pred             CCccceEeEEeeecHHHhhHHhCC-----CCCCCEEeecCCC-CCeecCCCCCchheECC----EEEEEEEeCCCCCCCC
Confidence            367899999999999999998764     5789999998643 57999999999999964    799999999 6783  


Q ss_pred             ---c--eeeEEEEeeccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~   93 (388)
                         +  ++++.|.+||.+++
T Consensus       205 ~~p~vyt~V~~y~~WI~~~~  224 (225)
T 1npm_A          205 EKPGVYTKICRYTTWIKKTM  224 (225)
T ss_dssp             TBCEEEEEHHHHHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHh
Confidence               2  88889999998754

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=99.46  E-value=4.6e-14  Score=125.25  Aligned_cols=89  Identities=31%  Similarity=0.541  Sum_probs=72.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEe----ecCC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVST----GIGS   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~----~~~~   77 (388)
                      .++.||++++++++.++|+..+.... ...+.+.||||+...++.+.|+|||||||++.. ++|+|+||+||    +.+|
T Consensus       141 ~~~~L~~~~~~~~~~~~C~~~~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~l~Gi~S~~~~~g~~C  218 (241)
T 1m9u_A          141 LPDILQKSSIPVITTAQCTAAMVGVG-GANIWDNHICVQDPAGNTGACNGDSGGPLNCPD-GGTRVVGVTSWVVSSGLGA  218 (241)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHTTST-TCCCCTTEEEECCTTSCCBCCTTCTTCEEEEES-SSEEEEEEEEECCBCTTSC
T ss_pred             cccceeEeeEEEEcHHHhhhhhcccC-CCcccCCcEEECcCCCCCeeecCcCCccEEEeC-CCEEEEEEEEEeccCCCCc
Confidence            46789999999999999998764211 113789999998755668999999999999985 88999999999    4567


Q ss_pred             C-----c--eeeEEEEeecccc
Q psy13815         78 P-----T--SVVQLLTRWTLDL   92 (388)
Q Consensus        78 ~-----~--~~~~~~~~wi~~~   92 (388)
                      .     +  ++++.|.+||.++
T Consensus       219 ~~~~~p~vyt~V~~~~~WI~~~  240 (241)
T 1m9u_A          219 CLPDYPSVYTRVSAYLGWIGDN  240 (241)
T ss_dssp             BCTTSCEEEEEGGGTHHHHHHH
T ss_pred             cCCCCCEEEEEhHHhHhHHhhh
Confidence            2     2  8888999999764

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=99.46  E-value=5.3e-14  Score=124.52  Aligned_cols=90  Identities=29%  Similarity=0.536  Sum_probs=74.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-CC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-SP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~--   78 (388)
                      .++.|+++++++++.++|+..+...  ...+.+.||||+...++.+.|+|||||||++..    .|+||+|||.+ |.  
T Consensus       135 ~~~~l~~~~~~~~~~~~C~~~~~~~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~  208 (238)
T 4e7n_A          135 YPDVPHCVNINLLEYEMCRAPYPEF--ELPATSRTLCAGILEGGKDTCKGDSGGPLICNG----QFQGIASWGDDPCAQP  208 (238)
T ss_dssp             CCSSCEEEEEEEECGGGGTTTCGGG--CCCSCCSEEEEECTTCSCBCCTTCTTCEEEETT----EEEEEEEECCSSTTCT
T ss_pred             CCccceEeeccccCHHHHhhhcccc--cCCCCCCeEEeCCCCCCCccCCCCCCcceEECC----EEEEEEEEeCCCCCCC
Confidence            3678999999999999999877531  114688999998766778999999999999965    69999999976 72  


Q ss_pred             ---c--eeeEEEEeeccccccCCC
Q psy13815         79 ---T--SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~~~~   97 (388)
                         +  ++|+.|.+||.+++....
T Consensus       209 ~~p~vyt~V~~~~~WI~~~i~~~~  232 (238)
T 4e7n_A          209 HKPAAYTKVFDHLDWIENIIAGNT  232 (238)
T ss_dssp             TCCEEEEESGGGHHHHHHHHTTCT
T ss_pred             CCCeEEEEhHHHHHHHHHHHhcCC
Confidence               2  889999999998876543

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=99.46  E-value=1.9e-14  Score=144.59  Aligned_cols=89  Identities=36%  Similarity=0.628  Sum_probs=67.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.||+++|+++++++|+..|...    .+.+.||||+...++.++|+|||||||++..+++|+|+||+|||.+|.   
T Consensus       528 ~s~~L~~~~v~i~~~~~C~~~~~~~----~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~  603 (625)
T 2f83_A          528 IQNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRE  603 (625)
T ss_dssp             CCSBCBCCEECCCCHHHHHTTCTTS----CCCTTBCCC----------CCCTTCEEEEEETTEEEEEEEEEECCC----C
T ss_pred             CCcccEEEEEEEcCHHHHHHHhccC----CCCCCeEEeecCCCCCcCCCCCcccceEEEECCeEEEEEEEEeCCCCCCCC
Confidence            4678999999999999999877531    478999999876667899999999999999889999999999999882   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++|+.|.+||.+++.
T Consensus       604 ~P~vyT~V~~y~~WI~~~~~  623 (625)
T 2f83_A          604 RPGVYTNVVEYVDWILEKTQ  623 (625)
T ss_dssp             CCCEEEEGGGGHHHHHHTC-
T ss_pred             CCeEEEEHHHHHHHHHHHHh
Confidence              3  889999999987664

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=99.45  E-value=1.5e-14  Score=128.26  Aligned_cols=84  Identities=29%  Similarity=0.501  Sum_probs=67.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP---   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~---   78 (388)
                      ++.||++++++++.++|+..+..     .+.+.||||+...++.+.|+|||||||++.+    +|+||+||| .+|.   
T Consensus       147 ~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~GI~S~g~~~C~~~~  217 (240)
T 1sgf_A          147 PDDLQCVNLKLLPNEDCDKAHEM-----KVTDAMLCAGEMDGGSYTCEHDSGGPLICDG----ILQGITSWGPEPCGEPT  217 (240)
T ss_dssp             -----CEEEEEECTHHHHTTCSS-----BCCTTEEEEEECSSSEEECCCCTTCEEEETT----EEEEEECCCCSSCCCSS
T ss_pred             CccccEEeeeEeCHHHhhhhhCC-----CcCCCeEeEccCCCCCCCCCCCCcCcEEEcc----EEEEEEEECCCCCCCCC
Confidence            67899999999999999887653     5789999998655667899999999999954    899999999 6683   


Q ss_pred             --c--eeeEEEEeeccccccC
Q psy13815         79 --T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~~   95 (388)
                        +  ++++.|.+||.+.+..
T Consensus       218 ~p~vyt~V~~~~~WI~~~~~~  238 (240)
T 1sgf_A          218 EPSVYTKLIKFSSWIRETMAN  238 (240)
T ss_dssp             CCEEEEESGGGHHHHHHHHHS
T ss_pred             CCeEEEeHHHHHHHHHHHHhc
Confidence              2  8888999999887653

>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}

Probab=99.45  E-value=5.2e-14  Score=119.31  Aligned_cols=159  Identities=18%  Similarity=0.235  Sum_probs=94.5

Q ss_pred             CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        137 HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       137 ~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      .+...|+.-++-.++||||+||+..      ...  |.+.  +     .      ++ .+.+|    ..+|||||||+.+
T Consensus        12 ~~~~~CT~Gf~~~~~ilTa~Hc~~~------~~~--v~~~--d-----g------~v-~~~~~----~~~DiAlikl~~~   65 (189)
T 2ea3_A           12 GGRSRCSIGFAVNGGFITAGHCGRT------GAT--TANP--T-----G------TF-AGSSF----PGNDYAFVRTGAG   65 (189)
T ss_dssp             TTEEEEECCEEETTEEEECGGGCCT------TCE--EETT--T-----E------EE-EEEEC----SBSCEEEEEECTT
T ss_pred             CCCCCCccCEEccCeEEEchhcCCC------CCE--EEeC--C-----c------EE-EeeCC----CCCCEEEEEECCC
Confidence            3456899877777799999999865      222  2221  1     1      11 12222    1479999999988


Q ss_pred             CCCCCCee-----eeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCe
Q psy13815        217 IQWSDLIR-----PACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ  291 (388)
Q Consensus       217 v~~~~~v~-----picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~  291 (388)
                      ..+.+.++     +++|+.......++.+.  .||.+..          +....+..++...+   +.. +....+...+
T Consensus        66 ~~~~~~v~~~~g~~v~l~~s~~~~vG~~v~--~~G~~tG----------~t~G~Vs~~~~~v~---~~~-~~~~~~~~~~  129 (189)
T 2ea3_A           66 VNLLAQVNNYSGGRVQVAGHTAAPVGSAVC--RSGSTTG----------WHCGTITALNSSVT---YPE-GTVRGLIRTT  129 (189)
T ss_dssp             CEEEEEEECSSSCEEECCBCCCCCTTCEEE--EEETTTE----------EEEEEEEEEEEEEE---ETT-EEEEEEEEES
T ss_pred             CccccceEecCCceeecCCCcCCCCCCEEE--EEEeCCc----------cEEEEEEecceEEE---eCC-ccCcceEEee
Confidence            76666665     67777544335566554  4443311          22233333322211   000 0000122234


Q ss_pred             EEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCC-CCCCCCCeE
Q psy13815        292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG-CARPRLPGL  370 (388)
Q Consensus       292 ~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~-c~~~~~p~v  370 (388)
                      +|+.                                       +|||||||++..    .++||+|++.. |.. ..+.+
T Consensus       130 ~~~~---------------------------------------~GDSGgpl~~~~----~~vGi~s~~~~~c~~-~~~~~  165 (189)
T 2ea3_A          130 VCAE---------------------------------------PGDSGGSLLAGN----QAQGVTSGGSGNCRT-GGTTF  165 (189)
T ss_dssp             CCCC---------------------------------------TTCTTCEEEETT----EEEEEEEEEEEETTT-EEEEE
T ss_pred             eecc---------------------------------------CCCccCeEEECC----EEEEEEeecCCCCCC-CCcEE
Confidence            5542                                       799999999732    69999999875 654 46899


Q ss_pred             EEeCCCchhHH
Q psy13815        371 YTRLTRYIGWI  381 (388)
Q Consensus       371 ~t~V~~~~~WI  381 (388)
                      |++|..+++|.
T Consensus       166 ~~pi~~~l~~~  176 (189)
T 2ea3_A          166 FQPVNPILQAY  176 (189)
T ss_dssp             EEEHHHHHHHH
T ss_pred             EEEHHHHHHHC
Confidence            99999999887

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=99.45  E-value=4.9e-14  Score=124.67  Aligned_cols=86  Identities=29%  Similarity=0.368  Sum_probs=71.2

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec--CCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI--GSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~--~~~-   78 (388)
                      .++.|+++.++++++++|+..+..   ...+.+.||||+. .+ .+.|+|||||||++..+++|+|+||+||+.  +|. 
T Consensus       141 ~~~~l~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~-~~-~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~  215 (236)
T 1elt_A          141 LSDSLKQAWLPSVDHATCSSSGWW---GSTVKTTMVCAGG-GA-NSGCNGDSGGPLNCQVNGSYYVHGVTSFVSSSGCNA  215 (236)
T ss_dssp             CCSBCEEEECCEECHHHHTSTTTT---GGGSCTTEEEECC-SS-CBCCTTCTTCEEEEEETTEEEEEEEEEECCSSCTTC
T ss_pred             cChhheEeEeeecCHHHhcccccc---CCcCCcceEEecC-CC-CccCCCCCCCeeEEEECCEEEEEEEEEEeCCCCCCC
Confidence            467899999999999999875321   1147899999984 33 799999999999998889999999999985  783 


Q ss_pred             ----c--eeeEEEEeecccc
Q psy13815         79 ----T--SVVQLLTRWTLDL   92 (388)
Q Consensus        79 ----~--~~~~~~~~wi~~~   92 (388)
                          +  ++++.|.+||.++
T Consensus       216 ~~~p~vyt~V~~~~~WI~~~  235 (236)
T 1elt_A          216 SKKPTVFTRVSAYISWMNGI  235 (236)
T ss_dssp             TTCCEEEEEGGGGHHHHHHH
T ss_pred             CCCCeEEEEHHHhHHHHHhh
Confidence                2  8888999999764

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=99.45  E-value=2.9e-14  Score=135.84  Aligned_cols=88  Identities=28%  Similarity=0.472  Sum_probs=73.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCce------EEeeCCcEEEEeeEEee-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPL------MLLGAESTQVIGLVSTG-   74 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl------~~~~~~~~~~~Gi~s~~-   74 (388)
                      .|+.||+++++++++++|+..|..     .+...||||+.. .++++|+|||||||      ++..+++|+++||+||| 
T Consensus       273 ~s~~L~~~~v~iv~~~~C~~~~~~-----~~~~~~iCAg~~-~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~  346 (408)
T 2xxl_A          273 SSDVLLQANVPLQPRSACSQAYRR-----AVPLSQLCVGGG-DLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGV  346 (408)
T ss_dssp             SCSBCEEEEEEEECHHHHHHHHTS-----CCCTTEEEECCS-CSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECC
T ss_pred             CCchheEeeeeecCHHHHHHHhcc-----cCCCceEeecCC-CCCccCCCcccChhhcCccceEEECCEEEEEEEEEECC
Confidence            367899999999999999998865     355689999864 35799999999999      44445789999999999 


Q ss_pred             cCCC-----c--eeeEEEEeeccccccC
Q psy13815         75 IGSP-----T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        75 ~~~~-----~--~~~~~~~~wi~~~~~~   95 (388)
                      .+|.     +  |+|+.|.+||.+.+..
T Consensus       347 ~~Cg~~~~PgVYTrVs~y~~WI~~~i~~  374 (408)
T 2xxl_A          347 VTCGQISLPGLYTNVGEYVQWITDTMAS  374 (408)
T ss_dssp             CCTTSCCCCEEEEEGGGGHHHHHHHHHH
T ss_pred             CCCCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence            7883     2  8899999999887653

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=99.45  E-value=4.7e-14  Score=123.75  Aligned_cols=84  Identities=35%  Similarity=0.584  Sum_probs=70.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .+..|+++++++++.++|+..+...    .+.+.||||+...++.+.|+|||||||++. ++  +|+||+|||.+|.   
T Consensus       133 ~~~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~-~g--~l~Gi~S~g~~C~~~~  205 (224)
T 1pq7_A          133 TPVNLLKVTVPIVSRATCRAQYGTS----AITNQMFCAGVSSGGKDSCQGDSGGPIVDS-SN--TLIGAVSWGNGCARPN  205 (224)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHHCTT----TSCTTEEEECCTTCCCBCCTTCTTCEEECT-TC--CEEEEEEECSSSSCTT
T ss_pred             ccceeeEeEEEEEcHHHhhHhhcCC----CCCCCeEEeecCCCCCCCCcCCCCcceECc-CC--eEEEEEEeCCCCCCCC
Confidence            3568999999999999999887521    478999999865567899999999999985 22  7999999999883   


Q ss_pred             --c--eeeEEEEeecccc
Q psy13815         79 --T--SVVQLLTRWTLDL   92 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~   92 (388)
                        +  ++++.|.+||.++
T Consensus       206 ~p~vyt~V~~~~~WI~~~  223 (224)
T 1pq7_A          206 YSGVYASVGALRSFIDTY  223 (224)
T ss_dssp             CCEEEEETTTSHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHhh
Confidence              2  8888899999764

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=99.44  E-value=8.3e-14  Score=122.75  Aligned_cols=85  Identities=33%  Similarity=0.611  Sum_probs=72.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.||++++++++.++|+..+..      +.+.||||+...++.+.|+|||||||++.+    +|+||+||+ .+|.  
T Consensus       132 ~~~~l~~~~~~~~~~~~C~~~~~~------~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~  201 (231)
T 2aiq_A          132 LPDVPHCANINILDYAVCQAAYKG------LAATTLCAGILEGGKDTCKGDSGGPLICNG----QFQGILSVGGNPCAQP  201 (231)
T ss_dssp             CCSSCEEEEEEEECHHHHHHHCTT------CCSSEEEEECTTCSCBCCTTCTTCEEEETT----EEEEEEEEECSSTTCT
T ss_pred             cCchhhhccceecchhhhhhhhcC------CCcCcEEeccCCCCCcccCCcCCCcEEECC----EEEEEEEEeCCCCCCC
Confidence            367899999999999999987752      678999998655678999999999999964    899999999 6783  


Q ss_pred             ---c--eeeEEEEeeccccccCC
Q psy13815         79 ---T--SVVQLLTRWTLDLEVGG   96 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~~~   96 (388)
                         +  ++++.|.+||.+++...
T Consensus       202 ~~p~vyt~V~~~~~WI~~~~~~~  224 (231)
T 2aiq_A          202 RKPGIYTKVFDYTDWIQSIISGN  224 (231)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHHTC
T ss_pred             CCCEEEEEHHHHHHHHHHHHcCC
Confidence               2  88899999999887653

>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1

Probab=99.44  E-value=5.5e-13  Score=113.20  Aligned_cols=163  Identities=17%  Similarity=0.154  Sum_probs=99.0

Q ss_pred             CceeEE-EEEeeC---CEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEe
Q psy13815        138 GGHFCG-GTIIHE---QWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLEL  213 (388)
Q Consensus       138 ~~~~C~-GtLI~~---~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L  213 (388)
                      +...|+ |.++++   .|||||+||+...      ..  +.++...      +  .+..+. ...|    ..+|||||||
T Consensus        10 ~~~~CT~Gfiv~~~g~~~ilT~~Hv~~~~------~~--v~~~~~~------~--~~g~~~-~~~~----~~~DiAlikl   68 (187)
T 1hpg_A           10 GGSRCSAAFNVTKGGARYFVTAGHCTNIS------AN--WSASSGG------S--VVGVRE-GTSF----PTNDYGIVRY   68 (187)
T ss_dssp             TTEEEECCEEEEETTEEEEEECHHHHTTC------SE--EESSTTC------C--EEEEEE-EEEC----SBSCEEEEEE
T ss_pred             CCCcCcceEEEEECCeeEEEECcccCCCC------Ce--EEeCCCc------e--eEEEEe-CccC----CCCCEEEEEe
Confidence            346798 888877   4999999999652      22  2222110      1  011111 0111    1479999999


Q ss_pred             CCCCCCCCCeee-----eeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccC
Q psy13815        214 TRSIQWSDLIRP-----ACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK  288 (388)
Q Consensus       214 ~~~v~~~~~v~p-----icLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~  288 (388)
                      +.++.+.+.+..     +.+........++.+..+||.....       ...+......+..        .   .  ...
T Consensus        69 ~~~~~~~~~v~~~~g~~~~i~~~~~~~~G~~v~~~G~~~g~t-------~G~v~~~~~~v~~--------~---~--~~~  128 (187)
T 1hpg_A           69 TDGSSPAGTVDLYNGSTQDISSAANAVVGQAIKKSGSTTKVT-------SGTVTAVNVTVNY--------G---D--GPV  128 (187)
T ss_dssp             CSSCCCCSEEECSSSCEEECCEECCCCTTCEEEEEETTTEEE-------EEEEEEEEEEEEE--------T---T--EEE
T ss_pred             CCCCCcCceEEecCCceeeeccccCCCCCCEEEEEEcCCCEe-------EEEEEEeEEEEEe--------C---C--CeE
Confidence            987665443321     3343333336788889999864311       2234433333311        1   0  113


Q ss_pred             CCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCC-CCCCCC
Q psy13815        289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG-CARPRL  367 (388)
Q Consensus       289 ~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~-c~~~~~  367 (388)
                      .+++|+.     ...|                              +|||||||++..    .++||+|++.. |.. ..
T Consensus       129 ~~~i~t~-----~~~~------------------------------~GdSGgpl~~~~----~~vGi~s~~~~~~~~-~~  168 (187)
T 1hpg_A          129 YNMVRTT-----ACSA------------------------------GGDSGGAHFAGS----VALGIHSGSSGCSGT-AG  168 (187)
T ss_dssp             EEEEEEC-----CCCC------------------------------TTCTTCEEEETT----EEEEEEEEESCCBTT-BC
T ss_pred             eeeEEec-----cccC------------------------------CCCCCCeEEECC----EEEEEEEeeCCCCCC-CC
Confidence            4588874     3455                              999999999763    69999999875 754 57


Q ss_pred             CeEEEeCCCchhHH
Q psy13815        368 PGLYTRLTRYIGWI  381 (388)
Q Consensus       368 p~v~t~V~~~~~WI  381 (388)
                      |.+|++|..+++.+
T Consensus       169 ~~~~~~i~~~~~~l  182 (187)
T 1hpg_A          169 SAIHQPVTEALSAY  182 (187)
T ss_dssp             CCEEEEHHHHHHHH
T ss_pred             ceEEEEHHHHHHHc
Confidence            89999999888765

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=99.44  E-value=6.1e-14  Score=123.02  Aligned_cols=84  Identities=30%  Similarity=0.460  Sum_probs=69.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCC---C
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGS---P   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~---~   78 (388)
                      .++.||++++++++.++|+..+..     ...+.||||+...+..+.|+|||||||++.+    +|+||+|||..+   |
T Consensus       135 ~~~~l~~~~~~i~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~~~~p  205 (224)
T 1cgh_A          135 GTDTLREVQLRVQRDRQCLRIFGS-----YDPRRQICVGDRRERKAAFKGDSGGPLLCNN----VAHGIVSYGKSSGVPP  205 (224)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHCTT-----CCTTTEEEECCTTSCCBCCTTCTTCEEEETT----EEEEEEEECCTTCCSC
T ss_pred             CCCcceEEEEEeeCHHHHHHHhCc-----CCCcceEeeccCCCCCeEeeCCCccceEEcc----EEEEEEEEECCCCCCC
Confidence            367899999999999999987743     3456699998765568999999999999964    899999999854   2


Q ss_pred             c--eeeEEEEeecccccc
Q psy13815         79 T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~~   94 (388)
                      +  ++++.|.+||.+++.
T Consensus       206 ~vyt~V~~~~~WI~~~~~  223 (224)
T 1cgh_A          206 EVFTRVSSFLPWIRTTMR  223 (224)
T ss_dssp             EEEEEGGGGHHHHHHHHH
T ss_pred             eEEEEHHHhHHHHHHHhh
Confidence            2  889999999987653

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=99.44  E-value=1.6e-14  Score=127.82  Aligned_cols=83  Identities=30%  Similarity=0.461  Sum_probs=71.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CCC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GSP---   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~~---   78 (388)
                      ++.||++++++++.++|+..++.     .+.+.||||+...+..+.|+|||||||++.+    +|+||+|||. +|.   
T Consensus       144 ~~~L~~~~~~~~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~GI~S~g~~~C~~~~  214 (237)
T 1gvz_A          144 SGTLQCVELRLQSNEKCARAYPE-----KMTEFVLCATHRDDSGSICLGDSGGALICDG----VFQGITSWGYSECADFN  214 (237)
T ss_dssp             EEEEEEEEEEEECGGGGCSSCGG-----GCCTTEEEEECSSTTCEECGGGTTCEEEETT----EEEEEECCCSSSCEETT
T ss_pred             CCccEEEEEeEeChhHhhhhhhh-----cCCCceEEEeeCCCCCccCCCCccCcEeeCC----EEEEEEEeCCCCCCCCC
Confidence            56799999999999999987764     5789999998755667899999999999954    7999999997 783   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++|+.|.+||.+++.
T Consensus       215 ~p~vyt~V~~~~~WI~~~~~  234 (237)
T 1gvz_A          215 DNFVFTKVMPHKKWIKETIE  234 (237)
T ss_dssp             TSCCEEESGGGHHHHHHHHH
T ss_pred             CCcEEEEHHHHHHHHHHHHh
Confidence              2  899999999987653

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=99.44  E-value=6.2e-14  Score=124.34  Aligned_cols=87  Identities=29%  Similarity=0.583  Sum_probs=71.1

Q ss_pred             CCcCceEEEEeeeChhhhH--hhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQ--AWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~--~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~-   78 (388)
                      .++.||++++++++.++|+  ..+..   ...+.+.||||+...+..+.|+|||||||++.+    +|+||+|||.+|. 
T Consensus       140 ~~~~L~~~~~~i~~~~~C~~~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~~~----~l~Gi~S~g~~C~~  212 (240)
T 1mza_A          140 PSDTLREVTVTVLSRKLCNSQSYYNG---DPFITKDMVCAGDAKGQKDSCKGDAGGPLICKG----VFHAIVSGGHECGV  212 (240)
T ss_dssp             CCSBCEEEEEEECCHHHHTSTTTTTT---TTCCCTTEEEEECTTSCCCCCTTCTTCEEEETT----EEEEEECSSCCSSC
T ss_pred             ccccceEeEEEEeCHHHcCCcceeCC---CCcCCCCeEeecCCCCCCccCCCCCCCeeEECC----EEEEEEEECCCCCC
Confidence            4678999999999999998  44432   114688999998655668999999999999964    8999999999883 


Q ss_pred             ----c--eeeEE-EEeeccccccC
Q psy13815         79 ----T--SVVQL-LTRWTLDLEVG   95 (388)
Q Consensus        79 ----~--~~~~~-~~~wi~~~~~~   95 (388)
                          +  ++++. |.+||.+.+..
T Consensus       213 ~~~p~vyt~v~~~y~~WI~~~~~~  236 (240)
T 1mza_A          213 ATKPGIYTLLTKKYQTWIKSNLVP  236 (240)
T ss_dssp             TTCCEEEEECCHHHHHHHHHHTCC
T ss_pred             CCCCcEEEeChHHHHHHHHHhccC
Confidence                2  78888 99999887653

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=99.44  E-value=7e-14  Score=123.98  Aligned_cols=88  Identities=32%  Similarity=0.470  Sum_probs=72.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeec--CCC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGI--GSP   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~--~~~   78 (388)
                      .++.||++.+++++.++|+..+..   ...+.+.||||+. .+ .+.|+|||||||++.. +++|+|+||+||+.  +|.
T Consensus       141 ~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~-~~-~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~  215 (240)
T 1fon_A          141 LPDKLQQALLPTVDYEHCSQWDWW---GITVKKTMVCAGG-DT-RSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCN  215 (240)
T ss_dssp             CCSBCEEEECCEECHHHHTSTTTT---GGGCCTTEEEECC-SS-SCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSS
T ss_pred             CChhheEEEEeeeCHHHhccceec---CCccccceEeecC-CC-CcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCC
Confidence            367899999999999999875321   1147889999984 33 8999999999999976 78999999999986  783


Q ss_pred             -----c--eeeEEEEeecccccc
Q psy13815         79 -----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -----~--~~~~~~~~wi~~~~~   94 (388)
                           +  ++++.|.+||.+++.
T Consensus       216 ~~~~p~vyt~V~~~~~WI~~~~~  238 (240)
T 1fon_A          216 TIKKPTVFTRVSAFIDWIDETIA  238 (240)
T ss_dssp             BTTBCEEEEEGGGSHHHHHHHHH
T ss_pred             CCCCCcEEEEhHHHHHHHHHHHh
Confidence                 2  888999999987653

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=99.43  E-value=1.1e-13  Score=122.13  Aligned_cols=88  Identities=32%  Similarity=0.537  Sum_probs=74.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-CC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-SP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~--   78 (388)
                      .++.|+++.+++++..+|+..+...    .+.+.||||+...++.+.|+|||||||++..    .|+||+|||.. |.  
T Consensus       133 ~~~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~C~~~  204 (234)
T 3s69_A          133 YPDVPYCAYINLLDDAVCQAGYPEL----LTEYRTLCAGILEGGKDTCGGDSGGPLICNG----QFQGIVSFGAHPCGQG  204 (234)
T ss_dssp             CCSSCEEEEEEEECHHHHHHHCTTC----CTTSCEEEEECTTCSCBCCTTCTTCEEEETT----EEEEEEEECCSSTTCT
T ss_pred             cccccceeEEeecCHHHHhhhcccc----cCCcceEeccCCCCCCccCCCCCccceEEcC----EEEEEEEEcccccCCC
Confidence            3678999999999999999987631    5678999998766778999999999999965    69999999975 73  


Q ss_pred             ---c--eeeEEEEeeccccccCCC
Q psy13815         79 ---T--SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~~~~   97 (388)
                         +  ++++.|.+||.+++....
T Consensus       205 ~~p~vyt~V~~~~~WI~~~i~~~~  228 (234)
T 3s69_A          205 LKPGVYTKVFDYNHWIQSIIAGNT  228 (234)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHHTCT
T ss_pred             CCCcEEeeHHHHHHHHHHHhcCCc
Confidence               2  888999999998876543

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=99.42  E-value=9.9e-14  Score=122.46  Aligned_cols=87  Identities=26%  Similarity=0.552  Sum_probs=73.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-CC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-SP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~--   78 (388)
                      .++.|+++++++++.++|+..+...    .+.+.||||+...++.+.|+|||||||++..    .|+||+||+.. |.  
T Consensus       133 ~~~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~----~l~Gi~S~g~~~C~~~  204 (234)
T 3s9c_A          133 YPDVPHCTNIFIVKHKWCEPLYPWV----PADSRTLCAGILKGGRDTCHGDSGGPLICNG----EMHGIVAGGSEPCGQH  204 (234)
T ss_dssp             CCSSCEEEEEEEECGGGTTTTCTTS----CTTSSEEEEECTTSSCBCCTTCTTCEEEETT----EEEEEEEECCSSTTCT
T ss_pred             CCccccccceEecCHHHhhhcccCC----CCCcceEEeecCCCCCccCCCCCCCeEEEeC----CcEEEEEEeCCCCCCC
Confidence            3678999999999999999887631    5788999998766778999999999999976    69999999976 73  


Q ss_pred             ---c--eeeEEEEeeccccccCC
Q psy13815         79 ---T--SVVQLLTRWTLDLEVGG   96 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~~~   96 (388)
                         +  ++|+.|.+||.+++...
T Consensus       205 ~~p~vyt~V~~y~~WI~~~i~~~  227 (234)
T 3s9c_A          205 LKPAVYTKVFDYNNWIQSIIAGN  227 (234)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHHTC
T ss_pred             CCCcEEEEhHHhHHHHHHHHcCC
Confidence               2  88899999999887654

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=99.42  E-value=1.3e-13  Score=121.16  Aligned_cols=85  Identities=27%  Similarity=0.430  Sum_probs=72.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.|+++++++++.++|+..+...    ...+.||||+...+..+.|+|||||||++..    .++||+|||..|.   
T Consensus       137 ~~~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~----~l~Gi~S~g~~c~~~p  208 (227)
T 3fzz_A          137 FPKTLHEVKLTVQKDQVCESQFQSS----YNRANEICVGDSKIKGASFEEDSGGPLVCKR----AAAGIVSYGQTDGSAP  208 (227)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHTTT----CCTTTEEEECCCSSCBCCTTTTTTCEEEETT----EEEEEEEECCTTCSSS
T ss_pred             CCCeeeEEEeeeecHHHhhhhhccc----cCCCceEEEeCCCCCCcccccCCccceEEec----CCcEEEEECCCCCCCC
Confidence            4678999999999999999877542    3478899999766778999999999999965    8999999999883   


Q ss_pred             c--eeeEEEEeecccccc
Q psy13815         79 T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~~   94 (388)
                      +  ++++.|.+||.+++.
T Consensus       209 ~vyt~V~~~~~WI~~~i~  226 (227)
T 3fzz_A          209 QVFTRVLSFVSWIKKTMK  226 (227)
T ss_dssp             EEEEEGGGTHHHHHHHHT
T ss_pred             eEEEEhHHhHHHHHHHHh
Confidence            3  889999999987653

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=99.42  E-value=1e-13  Score=121.77  Aligned_cols=85  Identities=26%  Similarity=0.412  Sum_probs=68.4

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCC---C
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGS---P   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~---~   78 (388)
                      .++.||++++++++.++|+..+...    ...+.||||+...++.+.|+|||||||++.+    +|+||+|||-++   |
T Consensus       136 ~~~~L~~~~~~i~~~~~C~~~~~~~----~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~S~gc~~~~~p  207 (227)
T 1iau_A          136 HSHTLQEVKMTVQEDRKCESDLRHY----YDSTIELCVGDPEIKKTSFKGDSGGPLVCNK----VAQGIVSYGRNNGMPP  207 (227)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHTTTT----CCTTTEEEESCTTSCCBCCTTCTTSEEEETT----EEEEEEEEECTTSCSC
T ss_pred             cCceeeEeeeeeechHHhhhHhccc----cCCCcEEEeECCCCCCeeeecCCCchheEee----EEEEEEeEecCCCCCC
Confidence            4678999999999999999877541    2345599999765568999999999999964    899999998222   2


Q ss_pred             c--eeeEEEEeecccccc
Q psy13815         79 T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~~   94 (388)
                      +  ++++.|.+||.+.+.
T Consensus       208 ~vyt~v~~~~~WI~~~~~  225 (227)
T 1iau_A          208 RACTKVSSFVHWIKKTMK  225 (227)
T ss_dssp             EEEEEGGGGHHHHHHHHH
T ss_pred             eEEEEHHHHHHHHHHHHh
Confidence            2  889999999987653

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=99.41  E-value=1.3e-13  Score=121.03  Aligned_cols=83  Identities=33%  Similarity=0.583  Sum_probs=70.2

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec--CCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI--GSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~--~~~-   78 (388)
                      .++.||+++++++++++|+..++      .+.+.||||+. .++.+.|+|||||||++.+    +|+||+|||.  +|. 
T Consensus       134 ~~~~L~~~~~~i~~~~~C~~~~~------~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~----~l~Gi~S~g~~~~C~~  202 (226)
T 1azz_A          134 ISDVLRQVDVPIMSNADCDAVYG------IVTDGNICIDS-TGGKGTCNGDSGGPLNYNG----LTYGITSFGAAAGCEA  202 (226)
T ss_dssp             SCSBCEECCEEEECHHHHHHHHS------CCCTTEEEECC-TTTCBCCTTCTTCEEEETT----EEEEEEEEEETTCTTS
T ss_pred             CCchhEEeeEEEEChhHhhhhhC------cCCCceEeecC-CCCCccCCCCCCcceEECC----EEEEEEEEECCCCCCC
Confidence            36789999999999999999875      37899999985 4568999999999999743    8999999997  673 


Q ss_pred             ---c--eeeEEEEeeccccccC
Q psy13815         79 ---T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~~   95 (388)
                         +  ++++.|.+||.+.+..
T Consensus       203 ~~p~vyt~V~~~~~WI~~~~~~  224 (226)
T 1azz_A          203 GYPDAFTRVTYFLDWIQTQTGI  224 (226)
T ss_dssp             CCCEEEEESGGGHHHHHHHHCC
T ss_pred             CCCCEEEEHHHHHHHHHHHhCC
Confidence               2  8889999999887643

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=99.39  E-value=1.5e-13  Score=124.92  Aligned_cols=86  Identities=14%  Similarity=0.132  Sum_probs=69.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCC----
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGS----   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~----   77 (388)
                      .++.||++++++++.++|+..++.     .++++||||+.. .  ..|.|||||||++..+++|+|+||+||+..|    
T Consensus       186 ~~~~L~~~~v~~~~~~~C~~~~~~-----~~~~~~~Ca~~~-~--~~~~gDSGgPlv~~~~~~~~l~GIvS~g~c~~~~~  257 (283)
T 3f1s_B          186 LGNSLTTRPVTLVEGEECGQVLNV-----TVTTRTYCERSS-V--AAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAH  257 (283)
T ss_dssp             ----CEEEEEEEECHHHHHHHHTS-----CCCTTEEEEECS-S--CGGGBCTTCEEEEECSSCEEEEEEECCCSGGGCSS
T ss_pred             CCceeeEEEEeEeCHHHHhhhhcC-----CCCCCeEcccCC-C--CCCCCCCCCcEEEEECCEEEEEEEEEeCCCCCCCc
Confidence            467899999999999999998865     588999999853 3  3456799999999988999999999998633    


Q ss_pred             Cc--eeeEEEEeeccccccC
Q psy13815         78 PT--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        78 ~~--~~~~~~~~wi~~~~~~   95 (388)
                      |+  ++|+.|.+||.+.+..
T Consensus       258 p~vyt~V~~y~~WI~~~~~~  277 (283)
T 3f1s_B          258 MVLVTKVSRYSLWFKQIMNA  277 (283)
T ss_dssp             EEEEEEGGGGHHHHHHHHTC
T ss_pred             ceEEEEhHHhHHHHHHHhhc
Confidence            22  8899999999988764

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=99.39  E-value=2.1e-13  Score=120.36  Aligned_cols=86  Identities=27%  Similarity=0.532  Sum_probs=68.9

Q ss_pred             CCcCceEEEEeeeChhhhHh--hhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec--CC
Q psy13815          2 RSNILQKVALSVVSNQVCQA--WYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI--GS   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~--~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~--~~   77 (388)
                      .++.||++++++++.++|+.  .+.   ....+.+.||||+...++.+.|+|||||||++.+    +|+||+|||.  +|
T Consensus       134 ~~~~L~~~~~~~~~~~~C~~~~~~~---~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~GI~S~g~~~~C  206 (234)
T 1orf_A          134 WSDTLREVEITIIDRKVCNDRNHYN---FNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEG----VFRGVTSFGLENKC  206 (234)
T ss_dssp             CCSBCEEEEEEEECHHHHTSTTTTT---TTTCCCTTEEEEECSSCCCBCCTTCTTCEEEETT----EEEEEEEECCTTCT
T ss_pred             ccccceEeEEEeeCHHHcCCccccc---cCCccCCCEEEecCCCCCCcCCCCCCCCeEEECC----EEEEEEEEcCCCCC
Confidence            36789999999999999983  332   1113455999998655678999999999999954    8999999997  78


Q ss_pred             C-----c--eeeE-EEEeecccccc
Q psy13815         78 P-----T--SVVQ-LLTRWTLDLEV   94 (388)
Q Consensus        78 ~-----~--~~~~-~~~~wi~~~~~   94 (388)
                      .     +  ++++ .|.+||.+++.
T Consensus       207 ~~~~~p~vyt~v~~~~~~WI~~~~~  231 (234)
T 1orf_A          207 GDPRGPGVYILLSKKHLNWIIMTIK  231 (234)
T ss_dssp             TCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred             CCCCCCCEEEEchHHHHHHHHHHHH
Confidence            3     2  8898 89999987664

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=99.38  E-value=2.9e-13  Score=118.47  Aligned_cols=81  Identities=32%  Similarity=0.546  Sum_probs=67.9

Q ss_pred             CCcCceEEEEeeeChhhhHh-hhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQA-WYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~-~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~--   78 (388)
                      .++.||++++++++.++|++ .+       .+.+.||||+. ..+.+.|+|||||||++.+    +++||+|||.+|.  
T Consensus       134 ~~~~L~~~~~~~~~~~~C~~~~~-------~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~----~l~GI~S~g~~C~~~  201 (222)
T 1eq9_A          134 TPNALQEIELIVHPQKQCERDQW-------RVIDSHICTLT-KRGEGACHGDSGGPLVANG----AQIGIVSFGSPCALG  201 (222)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHSS-------SCCTTEEEECC-CTTCBCCTTCTTCEEEETT----EEEEEEEECSTTTSS
T ss_pred             ccchheEeEEEEeCHHHhCcccC-------CCCccEEeecC-CCCCeeeeCCccceEEECC----EEEEEEEECCCcCCC
Confidence            36789999999999999984 33       25789999986 4567999999999999964    8999999999884  


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++++.|.+||.+.+.
T Consensus       202 ~p~vyt~V~~~~~WI~~~~~  221 (222)
T 1eq9_A          202 EPDVYTRVSSFVSWINANLK  221 (222)
T ss_dssp             SCEEEEEGGGGHHHHHHTSC
T ss_pred             CCCEEEEHHHHHHHHHHHhh
Confidence              2  888999999987653

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=99.38  E-value=2e-13  Score=119.82  Aligned_cols=83  Identities=29%  Similarity=0.484  Sum_probs=69.8

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.|+++++++++.++|+....      ...+.||||+...+..+.|+|||||||++..    +++||+|||.+|.   
T Consensus       137 ~~~~L~~~~~~~~~~~~C~~~~~------~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~----~l~Gi~S~g~~c~~~p  206 (226)
T 4ag1_A          137 GSDTLQEVKLRLMDPQACSHFRD------FDHNLQLCVGNPRKTKSAFKGDSGGPLLCAG----VAQGIVSYGRSDAKPP  206 (226)
T ss_dssp             BCSBCEEEEEEEECGGGGTTSTT------CCTTTEEEESCTTSCCBCCTTCTTCEEEETT----EEEEEEEECBTTCCSC
T ss_pred             CCCEeEEEEEEEcChHHcccccC------cCccceEeeccCCCCCcCccCCCCCceEEcC----EEEEEEEECCCCCCCC
Confidence            36789999999999999984322      3578899999766778999999999999954    9999999999883   


Q ss_pred             c--eeeEEEEeecccccc
Q psy13815         79 T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~~   94 (388)
                      .  ++++.|.+||.+++.
T Consensus       207 ~vyt~v~~~~~WI~~~i~  224 (226)
T 4ag1_A          207 AVFTRISHYRPWINQILQ  224 (226)
T ss_dssp             EEEEEHHHHHHHHHHHHH
T ss_pred             CEEEEhHHHHHHHHHHHh
Confidence            3  888999999987653

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=99.37  E-value=3.2e-13  Score=118.65  Aligned_cols=84  Identities=31%  Similarity=0.520  Sum_probs=68.7

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCC---C
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGS---P   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~---~   78 (388)
                      .++.||++++++++.++|+..+..     .+.+.||||+...+....|+|||||||++.+    +++||+|||-++   |
T Consensus       136 ~~~~L~~~~~~i~~~~~C~~~~~~-----~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~~~----~l~Gi~S~gc~~~~~p  206 (227)
T 1euf_A          136 STDKLQEVDLEVQSEEKCIARFKN-----YIPFTQICAGDPSKRKNSFSGDSGGPLVCNG----VAQGIVSYGRNDGTTP  206 (227)
T ss_dssp             BCSBCEEEEEEBCCTHHHHTTCTT-----CCTTTEEEESCTTSCCBCCTTCTTCEEEETT----EEEEEEEECCTTCCSC
T ss_pred             CchhheEeEeccccHHHhhHhhcC-----cCCCcEEEccCCCCCCcccccCCCCceEECC----EEEEEEEEeCCCCCCC
Confidence            367899999999999999987754     4788999998654435678999999999965    899999998322   2


Q ss_pred             c--eeeEEEEeecccccc
Q psy13815         79 T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~~   94 (388)
                      +  ++++.|.+||.+++.
T Consensus       207 ~vyt~V~~y~~WI~~~~~  224 (227)
T 1euf_A          207 DVYTRISSFLSWIHSTMR  224 (227)
T ss_dssp             EEEEEGGGTHHHHHHHTC
T ss_pred             eEEEEHHHhHHHHHHHHh
Confidence            2  889999999987764

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=99.37  E-value=2.4e-13  Score=138.85  Aligned_cols=90  Identities=30%  Similarity=0.595  Sum_probs=76.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .+..|+++.|+++++.+|+.....   ...+.+.||||+...++.++|+|||||||++..+++|+|+||+|||.+|.   
T Consensus       693 ~s~~L~~~~v~ii~~~~C~~~~~~---~~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~  769 (791)
T 4dur_A          693 GAGLLKEAQLPVIENKVCNRYEFL---NGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPN  769 (791)
T ss_dssp             CTTBCEEEEEEEECHHHHTSTTTT---TTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTT
T ss_pred             CCCeeEEEEEEEeCHHHhhccccc---CCCCCCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCC
Confidence            367899999999999999875211   11578999999977777899999999999999889999999999999983   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++|+.|.+||.+++.
T Consensus       770 ~PgVYTrVs~y~dWI~~~i~  789 (791)
T 4dur_A          770 KPGVYVRVSRFVTWIEGVMR  789 (791)
T ss_dssp             BCEEEEEGGGTHHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHHHH
Confidence              2  889999999987653

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=99.36  E-value=3.4e-13  Score=118.18  Aligned_cols=81  Identities=28%  Similarity=0.471  Sum_probs=68.9

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---c
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---T   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---~   79 (388)
                      +..|+++++++++.++|+. +..     ...+.||||+...+..+.|.|||||||++..    +++||+|||.+|.   .
T Consensus       138 ~~~l~~~~~~~~~~~~C~~-~~~-----~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~----~l~Gi~S~g~~c~~~p~  207 (224)
T 3rp2_A          138 SYTLREVELRIMDEKACVD-YRY-----YEYKFQVCVGSPTTLRAAFMGDSGGPLLCAG----VAHGIVSYGHPDAKPPA  207 (224)
T ss_dssp             CSBCEEEEEEEECGGGTTT-TTC-----CCTTTEEEECCTTSCCBCCTTTTTCEEEETT----EEEEEEEECCTTCCSCE
T ss_pred             CceeeEeeeeecChHHhcc-ccc-----cCcCCEEEecCCCCCCeeccCCCCCeEEEcc----eeeEEEEECCCCCCCCc
Confidence            5689999999999999987 322     3578899998766678999999999999965    8999999999883   3


Q ss_pred             --eeeEEEEeeccccc
Q psy13815         80 --SVVQLLTRWTLDLE   93 (388)
Q Consensus        80 --~~~~~~~~wi~~~~   93 (388)
                        ++++.|.+||.+++
T Consensus       208 vyt~v~~y~~WI~~~i  223 (224)
T 3rp2_A          208 IFTRVSTYVPWINAVI  223 (224)
T ss_dssp             EEEEHHHHHHHHHHHH
T ss_pred             EEEEHHHhHHHHHHHh
Confidence              88899999998754

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=99.36  E-value=6.3e-13  Score=130.59  Aligned_cols=93  Identities=19%  Similarity=0.312  Sum_probs=72.3

Q ss_pred             CcCceEEEEeeeC---hhhhHhhhhcC-CC------ccccCCCeeEecccCC--CcCCCCCCCCCceEEeeCCcEEEEee
Q psy13815          3 SNILQKVALSVVS---NQVCQAWYQSE-GK------KINVKESQMCAGHEQG--GKDACWADSGGPLMLLGAESTQVIGL   70 (388)
Q Consensus         3 s~~L~~~~~~v~~---~~~C~~~~~~~-~~------~~~~~~~~~Cag~~~~--~~~~C~gdsGgpl~~~~~~~~~~~Gi   70 (388)
                      ++.|+++++++++   ..+|+..+... .+      ...+++.||||+...+  +.++|+|||||||++..+++|+|+||
T Consensus       370 ~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GI  449 (497)
T 1rrk_A          370 EKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGV  449 (497)
T ss_dssp             SSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEE
T ss_pred             CCcceeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEE
Confidence            5689999999998   78998753210 01      1247899999986432  46899999999999998899999999


Q ss_pred             EEeec--CCC----c-----------eeeEEEEeeccccccC
Q psy13815         71 VSTGI--GSP----T-----------SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        71 ~s~~~--~~~----~-----------~~~~~~~~wi~~~~~~   95 (388)
                      +|||.  +|.    .           ++|+.|.+||.+++..
T Consensus       450 vS~g~~~~C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~~  491 (497)
T 1rrk_A          450 ISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQD  491 (497)
T ss_dssp             EEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTT
T ss_pred             EEecCCCCCCCccccCCCCCccceeeeeHHHHHHHHHHHhCc
Confidence            99997  685    1           4577899999987754

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=99.35  E-value=3.2e-13  Score=118.70  Aligned_cols=82  Identities=21%  Similarity=0.312  Sum_probs=69.9

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.|+++++++++.++|+..+...    .+.+.||||+..  +.+.|+|||||||++..    .|+||+||+.+|.    
T Consensus       139 ~~~L~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~~--~~~~C~GDsGgPl~~~~----~l~Gi~S~g~~c~~~~p  208 (228)
T 3h7o_A          139 DHDLKSAQLTVVDLDECRTKYGPI----FLSLQVFCAQKV--GVSLESGDAGDPTVQQD----TLVGVAAYFPKRPEGAP  208 (228)
T ss_dssp             GGBCEEEEEEEECHHHHHHHHTTS----CCCSSEEEEECT--TCCCCGGGTTCEEEETT----EEEEEECCCTTCCTTCC
T ss_pred             ccccccceeEEEcHHHHHHHhcCc----cCCceEEecCCC--CCcCCCCCCCCcceecC----eEEEEEeecCcCCCCCC
Confidence            567999999999999999988641    478899999854  38999999999999965    6999999999883    


Q ss_pred             c--eeeEEEEeecccccc
Q psy13815         79 T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~~   94 (388)
                      +  ++++.|.+||.+++.
T Consensus       209 ~vyt~v~~~~~WI~~~i~  226 (228)
T 3h7o_A          209 EVFTKVGSYVSWIQDIIK  226 (228)
T ss_dssp             EEEEEGGGTHHHHHHHHT
T ss_pred             cEEEEHHHHHHHHHHHhh
Confidence            2  889999999988764

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=99.34  E-value=3.9e-13  Score=118.20  Aligned_cols=83  Identities=29%  Similarity=0.502  Sum_probs=68.7

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~~--   78 (388)
                      .++.||++++++++.++|++.+...   ..+.+.||||+.  .+.+.|+|||||||++.+    +|+||+|++. +|.  
T Consensus       137 ~~~~l~~~~~~~~~~~~C~~~~~~~---~~~~~~~~Ca~~--~~~~~C~GDsGgPL~~~~----~l~Gi~s~g~~~C~~~  207 (228)
T 2xw9_A          137 RPDSLQHVLLPVLDRATCNRRTHHD---GAITERLMCAES--NRRDSCKGDAGGPLVCGG----VLEGVVTSGSRVCGNR  207 (228)
T ss_dssp             CCSBCEEEECCEECHHHHTSTTTTT---TCCCTTEEEECC--SSCBCCTTCTTCEEEETT----EEEEEECCSCCCSSCT
T ss_pred             CCchheEEEEEEcChhHhcCccccC---CcccCCEEecCC--CCCccCCCCCcccEEECC----EEEEEEeecCCcCCCC
Confidence            3678999999999999998876521   147899999984  457999999999999964    8999999997 783  


Q ss_pred             ---c--eeeEEEEeeccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~   93 (388)
                         +  ++++.|.+||.+++
T Consensus       208 ~~p~vyt~V~~~~~WI~~~i  227 (228)
T 2xw9_A          208 KKPGIYTRVASYAAWIDSVL  227 (228)
T ss_dssp             TSCEEEEEGGGGHHHHHHHH
T ss_pred             CCCcEEEEHHHHHHHHHHHh
Confidence               2  88889999998754

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.33  E-value=8.3e-13  Score=122.01  Aligned_cols=84  Identities=14%  Similarity=0.148  Sum_probs=71.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCC----
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGS----   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~----   77 (388)
                      .++.||++++++++.++|+..++.     .++++||||+..   ...|.|||||||++..+++|+|+||+||+..|    
T Consensus       227 ~~~~L~~~~v~~~~~~~C~~~~~~-----~~~~~~~Ca~~~---~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~~~~~~~  298 (317)
T 3h5c_B          227 LGNSLTTRPVTLVEGEECGQVLNV-----TVTTRTYCERSS---VAAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAH  298 (317)
T ss_dssp             SSCCCBCCEEEEECHHHHHHHHTC-----CCCTTEEEEECS---CCCCCCCTTCEEEEEETTEEEEEEEECCCCSSCCTT
T ss_pred             CCccceEEEEEEECHHHHhhhhcC-----cCCCceeECCCC---CCCcCCCCCCCEEEecCCEEEEEEEEEECCCCCCCc
Confidence            467899999999999999998865     588999999843   34688999999999989999999999998643    


Q ss_pred             Cc--eeeEEEEeeccccc
Q psy13815         78 PT--SVVQLLTRWTLDLE   93 (388)
Q Consensus        78 ~~--~~~~~~~~wi~~~~   93 (388)
                      |+  ++|+.|.+||.+++
T Consensus       299 p~vyt~V~~y~~WI~~~i  316 (317)
T 3h5c_B          299 MVLVTKVSRYSLWFKQIM  316 (317)
T ss_dssp             EEEEEEGGGCHHHHHHHH
T ss_pred             ceEEEEhHHhHHHHHHHh
Confidence            12  88999999998754

>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}

Probab=99.32  E-value=1.7e-11  Score=114.08  Aligned_cols=86  Identities=17%  Similarity=0.238  Sum_probs=63.9

Q ss_pred             ceeEEEEEeeCC--EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        139 GHFCGGTIIHEQ--WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       139 ~~~C~GtLI~~~--~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      ...++|+||+++  ||||+|||+.+      ...+.|.+..       .+.+..+-+..||.       +||||||++.+
T Consensus        62 ~~~GSGfiI~~~~G~IlTnaHVv~~------~~~i~V~~~d-------g~~~~a~vv~~d~~-------~DlAlLkv~~~  121 (345)
T 3stj_A           62 EGLGSGVIINASKGYVLTNNHVINQ------AQKISIQLND-------GREFDAKLIGSDDQ-------SDIALLQIQNP  121 (345)
T ss_dssp             EEEEEEEEEETTTTEEEECHHHHTT------EEEEEEECTT-------SCEEEEEEEEEETT-------TTEEEEEESSC
T ss_pred             ceeEEEEEEECCCCEEEEChHHhCC------CCEEEEEeCC-------CcEEEEEEEEEcCC-------CCEEEEEEccc
Confidence            457999999997  99999999965      4566776643       23456666777764       69999999765


Q ss_pred             CCCCCCeeeeeCCCCCCCCCCCeEEEEEcccc
Q psy13815        217 IQWSDLIRPACLPSGSLDYSEQSVTVAGWGWT  248 (388)
Q Consensus       217 v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~  248 (388)
                      .    .+.++.|........++.++++||...
T Consensus       122 ~----~~~~~~l~~s~~~~~G~~V~aiG~p~g  149 (345)
T 3stj_A          122 S----KLTQIAIADSDKLRVGDFAVAVGNPFG  149 (345)
T ss_dssp             C----SCCCCCBCCGGGCCTTBEEEEEECGGG
T ss_pred             C----CCceEeecCcccCCCCCEEEEEECCCC
Confidence            3    356777765444467899999999654

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=99.30  E-value=6.7e-13  Score=131.74  Aligned_cols=86  Identities=31%  Similarity=0.436  Sum_probs=55.1

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeecCCC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~~~~---   78 (388)
                      +..|+++++++++.  |+..|...    .....||||+...++.++|+|||||||++.. +++|+|+||+|||.+|.   
T Consensus       463 ~~~L~~~~v~i~~~--C~~~~~~~----~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~  536 (565)
T 2xrc_A          463 VFSLQWGEVKLISN--CSKFYGNR----FYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPE  536 (565)
T ss_dssp             ----CEEEEEECSC--THHHHTTS----CCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CC
T ss_pred             cceeeEEeeeehHH--hHHhhccC----cCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCC
Confidence            56899999999984  99887641    2334599999766668999999999999875 67899999999999883   


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        +  ++|+.|.+||.+.+.
T Consensus       537 ~PgVYTrVs~y~~WI~~~i~  556 (565)
T 2xrc_A          537 FPGVYTKVANYFDWISYHVG  556 (565)
T ss_dssp             CCEEEEEGGGGHHHHHHHC-
T ss_pred             CCEEEEEHHHHHHHHHHHhc
Confidence              2  889999999988764

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=99.29  E-value=2.1e-12  Score=113.66  Aligned_cols=84  Identities=32%  Similarity=0.501  Sum_probs=69.4

Q ss_pred             cCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec--CCC---
Q psy13815          4 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI--GSP---   78 (388)
Q Consensus         4 ~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~--~~~---   78 (388)
                      ..||++.+++++.++|+..+...    .+.+.||||+. ..+.+.|+|||||||++..  .++|+||+||+.  +|.   
T Consensus       136 ~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~Ca~~-~~~~~~C~GDSGgPl~~~~--~~~l~Gi~S~g~~~~C~~~~  208 (230)
T 2hlc_A          136 VILQYTYNLVIDNDRCAQEYPPG----IIVESTICGDT-SDGKSPCFGDSGGPFVLSD--KNLLIGVVSFVSGAGCESGK  208 (230)
T ss_dssp             CBCEEEEEEEECHHHHHTTSCTT----SSCTTEEEECC-TTSCBCCTTCTTCEEEEGG--GTEEEEEEEECCTTCTTSCC
T ss_pred             ceeEEEEEEEeCHHHhhhhhCCC----cccCCeEEecC-CCCCCcCCCCCCCeeEECc--CCEEEEEEEEeCCCCCCCCC
Confidence            47999999999999999876531    47789999985 4567999999999999875  349999999986  772   


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       .  ++++.|.+||.+.+.
T Consensus       209 p~vyt~V~~~~~WI~~~~~  227 (230)
T 2hlc_A          209 PVGFSRVTSYMDWIQQNTG  227 (230)
T ss_dssp             CEEEEEGGGGHHHHHHHHC
T ss_pred             CCEEEEhHHhHHHHHHhhC
Confidence             2  888899999987664

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=99.26  E-value=3.1e-12  Score=112.15  Aligned_cols=77  Identities=22%  Similarity=0.354  Sum_probs=66.0

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEee-cCCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTG-IGSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~-~~~~--   78 (388)
                      .++.|+++++++++.++|+.             .||||+...+..+.|+|||||||++.+    +|+||+||+ .+|.  
T Consensus       137 ~~~~l~~~~~~~~~~~~C~~-------------~~~Ca~~~~~~~~~C~GDSGgPl~~~g----~l~Gi~S~g~~~C~~~  199 (225)
T 1a7s_A          137 LSRFPRFVNVTVTPEDQCRP-------------NNVCTGVLTRRGGICNGDGGTPLVCEG----LAHGVASFSLGPCGRG  199 (225)
T ss_dssp             CCSSCEEEEEEECCGGGSCT-------------TEEEEECSSSSCBCCTTCTTCEEEETT----EEEEEEEEECSSTTSS
T ss_pred             cccccceeeeEECCHHHhcc-------------CceEEeccCCCCCcccCCCcchheeCC----EEEEEEEEccCCcCCC
Confidence            36789999999999999943             699998765568999999999999974    899999999 6783  


Q ss_pred             -c--eeeEEEEeeccccccC
Q psy13815         79 -T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~   95 (388)
                       +  ++++.|.+||.+++..
T Consensus       200 p~vyt~V~~~~~WI~~~~~~  219 (225)
T 1a7s_A          200 PDFFTRVALFRDWIDGVLNN  219 (225)
T ss_dssp             CEEEEEGGGGHHHHHHHHHS
T ss_pred             CcEEEEhHHhHHHHHHHhcC
Confidence             3  8889999999987754

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=99.21  E-value=8.4e-12  Score=122.91  Aligned_cols=88  Identities=20%  Similarity=0.309  Sum_probs=67.8

Q ss_pred             eEEEEeee---ChhhhHhhhhcC--------CCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec
Q psy13815          7 QKVALSVV---SNQVCQAWYQSE--------GKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI   75 (388)
Q Consensus         7 ~~~~~~v~---~~~~C~~~~~~~--------~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~   75 (388)
                      ++++++++   ++.+|+..+...        .....+++.||||+. .++.++|+|||||||++..+++|+|+||+|||.
T Consensus       380 ~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~-~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~  458 (509)
T 2odp_A          380 SKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGT-QEDESPCKGESGGAVFLERRFRFFQVGLVSWGL  458 (509)
T ss_dssp             CEEEEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECC-TTCCCCCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred             ceeeEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCC-CCCCcccCCCccCceEEEECCeEEEEEEEEEcC
Confidence            46677775   689999864211        001247899999985 456899999999999999999999999999997


Q ss_pred             --CCC--------------------c--eeeEEEEeeccccccC
Q psy13815         76 --GSP--------------------T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        76 --~~~--------------------~--~~~~~~~~wi~~~~~~   95 (388)
                        +|.                    .  ++|+.|.+||.+.+..
T Consensus       459 ~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~~~~~  502 (509)
T 2odp_A          459 YNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHLGD  502 (509)
T ss_dssp             CCTTC-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHHHHTT
T ss_pred             CCCCCCcccccccccCcccCCCCCCceeeeHHHHhHHHHHHhCC
Confidence              684                    1  4577799999887653

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=99.19  E-value=1.9e-11  Score=125.97  Aligned_cols=93  Identities=18%  Similarity=0.289  Sum_probs=74.8

Q ss_pred             CcCceEEEEeeeC---hhhhHhhhhcC-------CCccccCCCeeEecccCC--CcCCCCCCCCCceEEeeCCcEEEEee
Q psy13815          3 SNILQKVALSVVS---NQVCQAWYQSE-------GKKINVKESQMCAGHEQG--GKDACWADSGGPLMLLGAESTQVIGL   70 (388)
Q Consensus         3 s~~L~~~~~~v~~---~~~C~~~~~~~-------~~~~~~~~~~~Cag~~~~--~~~~C~gdsGgpl~~~~~~~~~~~Gi   70 (388)
                      +..|+++++++++   ...|...+...       .....+++.||||+...+  +.++|+|||||||++..+++|+|+||
T Consensus       612 ~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGI  691 (741)
T 3hrz_D          612 EKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGV  691 (741)
T ss_dssp             SSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEE
T ss_pred             ccccccceeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEE
Confidence            5679999999998   88999854321       112358899999986542  57899999999999999999999999


Q ss_pred             EEeec--CCC-------------c--eeeEEEEeeccccccC
Q psy13815         71 VSTGI--GSP-------------T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        71 ~s~~~--~~~-------------~--~~~~~~~~wi~~~~~~   95 (388)
                      +|||.  +|.             +  ++|+.|.+||.+++..
T Consensus       692 vS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~  733 (741)
T 3hrz_D          692 ISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQD  733 (741)
T ss_dssp             EEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTTT
T ss_pred             EeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhcC
Confidence            99997  772             2  5678899999988765

>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A

Probab=99.17  E-value=7.6e-10  Score=106.28  Aligned_cols=86  Identities=17%  Similarity=0.250  Sum_probs=64.1

Q ss_pred             ceeEEEEEeeCC--EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        139 GHFCGGTIIHEQ--WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       139 ~~~C~GtLI~~~--~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      ...++|.+|+++  ||||++||+.+      ...+.|.+...       ..+..+-+..||.       +||||||++.+
T Consensus        62 ~~~GSGfii~~~~G~IlTn~Hvv~~------a~~i~V~~~dg-------~~~~a~vv~~d~~-------~DlAllkv~~~  121 (436)
T 4a8c_A           62 EGLGSGVIINASKGYVLTNNHVINQ------AQKISIQLNDG-------REFDAKLIGSDDQ-------SDIALLQIQNP  121 (436)
T ss_pred             ceEEEEEEEECCCCEEEECHHHhCC------CCEEEEEeCCC-------CEEEEEEEEEcCC-------CCEEEEEecCC
Confidence            468999999997  99999999976      45667766431       3456666667764       69999999765


Q ss_pred             CCCCCCeeeeeCCCCCCCCCCCeEEEEEcccc
Q psy13815        217 IQWSDLIRPACLPSGSLDYSEQSVTVAGWGWT  248 (388)
Q Consensus       217 v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~  248 (388)
                      .    .+.++.|........++.++++||...
T Consensus       122 ~----~l~~~~l~~s~~~~~G~~v~aiG~P~g  149 (436)
T 4a8c_A          122 S----KLTQIAIADSDKLRVGDFAVAVGNPFG  149 (436)
T ss_pred             C----CCceEeccCcccCCCCCEEEEEEcCCC
Confidence            3    467888876554478899999998643

>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}

Probab=99.16  E-value=2.8e-11  Score=102.12  Aligned_cols=41  Identities=27%  Similarity=0.525  Sum_probs=32.3

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCC-CCCCCCCeEEEeCCCchhH
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGW  380 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~-c~~~~~p~v~t~V~~~~~W  380 (388)
                      +|||||||++..    .++||+|++.. |.. ..+.+|++|..+++-
T Consensus       137 ~GDSGgpl~~~~----~~vGi~s~g~~~c~~-~~~~~~~pi~~~l~~  178 (186)
T 2pfe_A          137 GGDSGGPWLTGS----QAQGVTSGGTGDCRS-GGITFFQPINPLLSY  178 (186)
T ss_dssp             TTCTTCEEEETT----EEEEEEEEEEEETTT-EEEEEEEEHHHHHHH
T ss_pred             CCCccCeEEECC----EEEEEEeecCCCCCC-CCcEEEEEHHHHHHH
Confidence            799999999733    69999999874 654 347899998876653

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=99.14  E-value=1.2e-11  Score=107.81  Aligned_cols=73  Identities=26%  Similarity=0.521  Sum_probs=60.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEe--ecCCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVST--GIGSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~--~~~~~-   78 (388)
                      .++.||+++++++ .++|+.             .||||+...+..+.|+|||||||++.+    +|+||+||  +. |. 
T Consensus       136 ~~~~l~~~~~~~~-~~~C~~-------------~~~Ca~~~~~~~~~C~GDSGgPl~~~~----~l~Gi~S~~~g~-C~~  196 (218)
T 2z7f_E          136 IASVLQELNVTVV-TSLCRR-------------SNVCTLVRGRQAGVCFGDSGSPLVCNG----LIHGIASFVRGG-CAS  196 (218)
T ss_dssp             BCSBCEEEEEEEE-CTTCCT-------------TSEEEECTTSCCBCCTTCTTCEEEETT----EEEEEEEEESSS-TTC
T ss_pred             ccchheEeeeEEe-hhHcCc-------------ceeeeccCCCCCeeCCCcCCCceEEcc----EEEEEEEeCCcc-CCC
Confidence            3678999999999 889954             289998665568999999999999965    89999999  65 73 


Q ss_pred             ----c--eeeEEEEeeccccc
Q psy13815         79 ----T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ----~--~~~~~~~~wi~~~~   93 (388)
                          +  ++++.|.+||.+++
T Consensus       197 ~~~p~vyt~V~~~~~WI~~~~  217 (218)
T 2z7f_E          197 GLYPDAFAPVAQFVNWIDSII  217 (218)
T ss_dssp             SSSCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCeEEEEHHHhHHHHHHHh
Confidence                2  88889999998754

>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A

Probab=99.06  E-value=1.8e-09  Score=103.97  Aligned_cols=170  Identities=19%  Similarity=0.196  Sum_probs=97.4

Q ss_pred             ceeEEEEEeeC--CEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        139 GHFCGGTIIHE--QWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       139 ~~~C~GtLI~~--~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      ...++|.+|++  .||||++||+.+      ...+.|.+..       ...+..+-+..||.       +||||||++. 
T Consensus        76 ~~~GSGfiI~~~~G~IlTn~HVv~~------a~~i~V~~~d-------g~~~~a~vv~~d~~-------~DlAlLkv~~-  134 (451)
T 3pv2_A           76 ESIGSGVIIDPNNGVIITNDHVIRN------ASLITVTLQD-------GRRLKARLIGGDSE-------TDLAVLKIDA-  134 (451)
T ss_dssp             EEEEEEEEEETTTTEEEECHHHHTT------EEEEEEECTT-------SCEEECEEEEEETT-------TTEEEEECCC-
T ss_pred             ceeEEEEEEECCCCEEEEChHHhCC------CCEEEEEEcC-------CCEEEEEEEecCcC-------CcEEEEEEcC-
Confidence            45799999997  499999999976      4567777643       23456666667764       6999999964 


Q ss_pred             CCCCCCeeeeeCCCCCCCCCCCeEEEEE--ccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCCccccCCCeEEe
Q psy13815        217 IQWSDLIRPACLPSGSLDYSEQSVTVAG--WGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA  294 (388)
Q Consensus       217 v~~~~~v~picLp~~~~~~~~~~~~~~G--wG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca  294 (388)
                          +.+.++.|........++.++++|  ||......     ...+   ...+++...-.. +.     ......++++
T Consensus       135 ----~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~-----~~~v---t~Givs~~~r~~-~~-----~~~~~~~iqt  196 (451)
T 3pv2_A          135 ----KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGN-----SQSA---TFGIVSALKRSD-LN-----IEGVENFIQT  196 (451)
T ss_dssp             ----SSCCCCCBCCGGGCCTTCEEEEEECCCCC----------CCEE---EEEEEEEEC----------------CCEEE
T ss_pred             ----cCCceeEecCcccCCCCCEEEEEECCCCcccccc-----CCce---eEEEEeeccccc-cC-----CCCcceEEEE
Confidence                345677776544446789999999  45332110     1222   222332211110 00     0112234554


Q ss_pred             ccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCC-CCCCCCCeEEEe
Q psy13815        295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTR  373 (388)
Q Consensus       295 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~-c~~~~~p~v~t~  373 (388)
                      .     ...+                              +|+|||||+...+   .|+||.++... .+.....++...
T Consensus       197 d-----a~i~------------------------------~GnSGGPl~n~~G---~VIGI~t~~~~~~~~~~g~gfaIP  238 (451)
T 3pv2_A          197 D-----AAIN------------------------------PGNSGGALVNAKG---ELIGINTAILSPYGGNVGIGFAIP  238 (451)
T ss_dssp             S-----SCCC------------------------------GGGTTSEEEETTC---CEEEEEECCC------CCCEEEEE
T ss_pred             e-----cccC------------------------------CCCCcCcccCCCC---eEEEEEeEeecCCCCccceeeeeh
Confidence            2     2334                              8999999996543   39999988653 211122344555


Q ss_pred             CCCchhHHhhhh
Q psy13815        374 LTRYIGWISDTL  385 (388)
Q Consensus       374 V~~~~~WI~~~i  385 (388)
                      +....+++++.+
T Consensus       239 ~~~~~~~~~~l~  250 (451)
T 3pv2_A          239 INMVKDVAQQII  250 (451)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH
Confidence            555556665543

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=99.05  E-value=6.3e-11  Score=103.44  Aligned_cols=74  Identities=28%  Similarity=0.537  Sum_probs=60.3

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CCC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GSP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~~--   78 (388)
                      .+..||++.++++ ..+|..             .|+||+...+..+.|+|||||||++.+    +++||+||+. +|.  
T Consensus       139 ~~~~l~~~~~~~~-~~~C~~-------------~~~Ca~~~~~~~~~C~GDSGgPL~~~~----~l~Gi~s~~~~gC~~~  200 (221)
T 1fuj_A          139 PAQVLQELNVTVV-TFFCRP-------------HNICTFVPRRKAGICFGDSGGPLICDG----IIQGIDSFVIWGCATR  200 (221)
T ss_dssp             BCSBCEEEEEEEE-CTTCCT-------------TEEEEECSSSSCBCCTTCTTCEEEETT----EEEEEEEECSSSTTCS
T ss_pred             HHHHhhcccceEE-eeecCC-------------ceeeeccCCCCCCCCCCCCCCeeEECC----EEeEEEEEeccCCCCC
Confidence            3678999999999 888843             299998765568999999999999954    8999999954 472  


Q ss_pred             ---c--eeeEEEEeeccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~   93 (388)
                         +  ++++.|.+||.+++
T Consensus       201 ~~p~vyt~v~~~~~WI~~~i  220 (221)
T 1fuj_A          201 LFPDFFTRVALYVDWIRSTL  220 (221)
T ss_dssp             SSCEEEEEGGGGHHHHHHHH
T ss_pred             CCCcEEEeHHHHHHHHHHHh
Confidence               2  88889999998754

>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}

Probab=98.94  E-value=1e-09  Score=92.85  Aligned_cols=40  Identities=28%  Similarity=0.488  Sum_probs=31.3

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCC-CCCCCCCeEEEeCCCchh
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIG  379 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~-c~~~~~p~v~t~V~~~~~  379 (388)
                      +|||||||++..    .++||+|++.. |.. ..+.+|++|..+++
T Consensus       140 ~GDSGgpl~~~~----~~vGi~s~~~~~~~~-~~~~~~~pi~~~l~  180 (188)
T 2oua_A          140 PGDSGGSFISGT----QAQGVTSGGSGNCRT-GGTTFYQEVNPMLN  180 (188)
T ss_dssp             TTCTTCEEEETT----EEEEEEEEEEEETTT-EEEEEEEESHHHHH
T ss_pred             CCCccceEEECC----EEEEEEeccCCCCCC-CCceEEEEHHHHHH
Confidence            799999999633    69999999874 754 34689999877654

>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A

Probab=98.77  E-value=1.4e-07  Score=90.67  Aligned_cols=86  Identities=20%  Similarity=0.254  Sum_probs=59.3

Q ss_pred             ceeEEEEEeeCC--EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        139 GHFCGGTIIHEQ--WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       139 ~~~C~GtLI~~~--~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      ...|+|.+|+++  ||||++||+..      ...+.|.+...       ..+..+-+..+|       ..|||||+++.+
T Consensus        85 ~~~GSG~ii~~~~g~IlTn~HVv~~------a~~i~V~~~dg-------~~~~a~vv~~d~-------~~DlAvlkv~~~  144 (448)
T 1ky9_A           85 MALGSGVIIDADKGYVVTNNHVVDN------ATVIKVQLSDG-------RKFDAKMVGKDP-------RSDIALIQIQNP  144 (448)
T ss_dssp             EEEEEEEEEETTTTEEEEEHHHHTT------EEEEEEEETTS-------CEEEEEEEEEET-------TTTEEEEEESSC
T ss_pred             ccEEEEEEEECCCCEEEEChHHhCC------CCEEEEEECCC-------CEEEEEEEEEcC-------CCCEEEEEecCC
Confidence            357999999985  99999999965      45677776531       233343333443       469999999864


Q ss_pred             CCCCCCeeeeeCCCCCCCCCCCeEEEEEcccc
Q psy13815        217 IQWSDLIRPACLPSGSLDYSEQSVTVAGWGWT  248 (388)
Q Consensus       217 v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~  248 (388)
                      -    .+.++.|........++.++++||...
T Consensus       145 ~----~~~~~~l~~s~~~~~G~~V~aiG~P~g  172 (448)
T 1ky9_A          145 K----NLTAIKMADSDALRVGDYTVAIGNPFG  172 (448)
T ss_dssp             C----SCCCCCBCCGGGCCTTCEEEEEECTTS
T ss_pred             C----CCceEEecccccCCCCCEEEEEECCCC
Confidence            2    355666765443367899999997543

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=98.58  E-value=3.3e-09  Score=91.98  Aligned_cols=68  Identities=15%  Similarity=0.173  Sum_probs=54.5

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      +..|+++.+++++.++|...+                    +..+.|+|||||||++.. +  +|+||+||+.+|..   
T Consensus       141 ~~~l~~~~~~~~~~~~c~~~~--------------------~~~~~C~GDSGgPl~~~~-g--~lvGi~S~g~~c~~~p~  197 (215)
T 1p3c_A          141 GKVSQWEMSGSVTREDTNLAY--------------------YTIDTFSGNSGSAMLDQN-Q--QIVGVHNAGYSNGTING  197 (215)
T ss_dssp             SSCCCEEEEEECCEECSSEEE--------------------ECCCCCTTCTTCEEECTT-S--CEEEECCEEEGGGTEEE
T ss_pred             cceechhccCccCcccchhee--------------------eccccCCCCCCCeeEccC-C--eEEEEEecccCCCccCc
Confidence            567899999999999996532                    136789999999999842 2  89999999988732   


Q ss_pred             --eeeEEEEeeccccc
Q psy13815         80 --SVVQLLTRWTLDLE   93 (388)
Q Consensus        80 --~~~~~~~~wi~~~~   93 (388)
                        ++++.|.+||.+++
T Consensus       198 v~t~v~~~~~WI~~~~  213 (215)
T 1p3c_A          198 GPKATAAFVEFINYAK  213 (215)
T ss_dssp             EEBCCHHHHHHHHHHH
T ss_pred             eeEechHHHHHHHHHh
Confidence              78888999998754

>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...

Probab=98.55  E-value=2.9e-07  Score=78.37  Aligned_cols=23  Identities=35%  Similarity=0.528  Sum_probs=18.6

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecC
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGI  360 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~  360 (388)
                      +|||||||+... +  .++||+|++.
T Consensus       140 ~GDSGGPl~~~~-g--~~vGI~s~~~  162 (198)
T 2h5c_A          140 RGDSGGSWITSA-G--QAQGVMSGGN  162 (198)
T ss_dssp             TTCTTCEEECTT-C--BEEEEEEEEC
T ss_pred             CCcceeEEEeeC-C--EEEEEEEeec
Confidence            899999999432 2  5999999974

>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}

Probab=98.41  E-value=5.3e-06  Score=68.03  Aligned_cols=81  Identities=22%  Similarity=0.232  Sum_probs=50.7

Q ss_pred             CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCC
Q psy13815        137 HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS  216 (388)
Q Consensus       137 ~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~  216 (388)
                      .....++|.+| +.+|||++||+.+      ...+.|.++.        ..+.. +++..|       ..||||||++.+
T Consensus        18 ~~~~~GSGfii-~g~IlTn~HVV~~------~~~i~V~~dg--------~~~~a-~vv~d~-------~~DlAlLkv~~~   74 (163)
T 2w5e_A           18 TPEGKGTGFFS-GNDIVTAAHVVGN------NTFVNVCYEG--------LMYEA-KVRYMP-------EKDIAFITCPGD   74 (163)
T ss_dssp             ETTEEEEEEEE-TTEEEEEHHHHTT------CSEEEEEETT--------EEEEE-EEEECC-------SSSEEEEECCTT
T ss_pred             CCceeEEEEEE-CCEEEecHHHhCC------CceEEEEECC--------EEEEE-EEEEEC-------CCCEEEEEecCC
Confidence            34567999999 8999999999976      3456666511        22333 233322       479999999864


Q ss_pred             CCCCCCeeeeeCCCCCCCCCCCeEEEEEcc
Q psy13815        217 IQWSDLIRPACLPSGSLDYSEQSVTVAGWG  246 (388)
Q Consensus       217 v~~~~~v~picLp~~~~~~~~~~~~~~GwG  246 (388)
                      .   ..+.|+.|....   ......++|+.
T Consensus        75 ~---~~~~~l~l~~~~---~~~~v~~~G~p   98 (163)
T 2w5e_A           75 L---HPTARLKLSKNP---DYSCVTVMAYV   98 (163)
T ss_dssp             C---CCSCCCCBCSSC---CTTEEEEEEEE
T ss_pred             C---CCcceEEcCCCC---CCCEEEEEEeC
Confidence            3   233455554432   23566777764

>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}

Probab=98.29  E-value=2.8e-05  Score=75.73  Aligned_cols=87  Identities=22%  Similarity=0.190  Sum_probs=55.3

Q ss_pred             ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        139 GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       139 ~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ...-+|.+|++.+|||.+|.+.+      ...+.|.+...      ...+..+-+...|       ..||||||++.+-.
T Consensus        73 ~s~GSGfiI~dG~IlTN~HVV~~------a~~i~V~~~~d------g~~~~A~vv~~D~-------~~DLAvLkv~~~~~  133 (539)
T 4fln_A           73 TSTGSAFMIGDGKLLTNAHCVEH------DTQVKVKRRGD------DRKYVAKVLVRGV-------DCDIALLSVESEDF  133 (539)
T ss_dssp             EEEEEEEEEETTEEEECGGGGTT------EEEEEEECTTC------CCCEEEEEEEEET-------TTTEEEEEECCSSS
T ss_pred             ceEEEEEEEECCEEEEChHHcCC------CCeEEEEEccC------CEEEEEEEEEECC-------CCCEEEEEEeCCcC
Confidence            34678999999999999999965      56666765211      1223333333343       36999999976522


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEccc
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGWGW  247 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~GwG~  247 (388)
                       ...+.|+.+...  ...++.+.++|+-.
T Consensus       134 -~~~~~pl~~g~~--~~vGd~V~aiG~P~  159 (539)
T 4fln_A          134 -WKGAEPLRLGHL--PRLQDSVTVVGYPL  159 (539)
T ss_dssp             -STTCCCCCBCCC--CCTTCEEEEEECCS
T ss_pred             -CcCCceeecCCc--CcCCCeEEEEEcCC
Confidence             233455555432  24578888888754

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=98.24  E-value=2.8e-07  Score=82.22  Aligned_cols=45  Identities=16%  Similarity=0.245  Sum_probs=34.8

Q ss_pred             ccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CCC
Q psy13815         31 NVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GSP   78 (388)
Q Consensus        31 ~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~~   78 (388)
                      .+.+.|+||+...+..++|+|||||||++.   .++|+||+|||. +|.
T Consensus       172 ~~~~~~iCag~~~~~gdtC~gdsGgPl~~~---~~~~~Gi~s~g~~~C~  217 (268)
T 1arb_A          172 GAGTTHLNVQWQPSGGVTEPGSSGSPIYSP---EKRVLGQLHGGPSSCS  217 (268)
T ss_dssp             SSCSSEEEEECCTTSCCCCTTCTTCEEECT---TSCEEEEEEECSCCTT
T ss_pred             cccCCeEEEeeecCCCCCccCcccCCcEee---CCEEEEEEeecCcccC
Confidence            366899999743212379999999999973   247999999996 684

>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A

Probab=98.22  E-value=6.1e-06  Score=84.51  Aligned_cols=81  Identities=16%  Similarity=0.174  Sum_probs=54.1

Q ss_pred             EEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCC
Q psy13815        143 GGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDL  222 (388)
Q Consensus       143 ~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~  222 (388)
                      .+|||+|+||+|+||=. .    +  .  .|.+|..      ...+   +++.|++|..    .|+++.||.+.|.   .
T Consensus        59 ~aTLI~pqYiVSvaHn~-g----y--~--~v~fG~~------~n~Y---~iV~rnn~~~----~Dy~~pRL~K~VT---E  113 (1048)
T 1wxr_A           59 VATLINPQYIASVKHNG-G----Y--T--NVSFGDG------ENRY---NIVDRNNAPS----LDFHAPRLDKLVT---E  113 (1048)
T ss_dssp             CCEEEETTEEEBCTTCC-S----C--C--EECCTTS------CCCE---EEEECCBCSS----SSCBCCEESSCCC---S
T ss_pred             eEEEEcCcEEEEeeecC-C----C--c--eEEeCCC------cceE---EEEeeCCCCC----CCeeeeecccccc---c
Confidence            48999999999999932 1    1  2  3555541      1134   3377887753    4999999999886   5


Q ss_pred             eeeeeCCCCCC-------CCCCCeEEEEEcccc
Q psy13815        223 IRPACLPSGSL-------DYSEQSVTVAGWGWT  248 (388)
Q Consensus       223 v~picLp~~~~-------~~~~~~~~~~GwG~~  248 (388)
                      +.||.+.....       .......+-+|-|..
T Consensus       114 vaP~~~t~~g~~~~~y~d~ery~~f~RvGsG~q  146 (1048)
T 1wxr_A          114 VAPTAVTAQGAVAGAYLDKERYPVFYRLGSGTQ  146 (1048)
T ss_dssp             SCCCCBCSSCSCTTGGGCTTTCCCEEEEECSCE
T ss_pred             ccceeeccccCccccccccccCceEEEECCcEE
Confidence            77887765531       134455677787766

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=98.19  E-value=9.5e-08  Score=80.68  Aligned_cols=68  Identities=25%  Similarity=0.192  Sum_probs=46.1

Q ss_pred             cCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC-----
Q psy13815          4 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP-----   78 (388)
Q Consensus         4 ~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~-----   78 (388)
                      ..|+.+++++ +...|. .+.      .+...|+|+         |+|||||||++.+    +++||+||+.+|.     
T Consensus       109 g~l~~~~~~v-~~~~~~-~~~------~~~~~~~ca---------c~GDSGGPlv~~~----~~vGI~s~g~~~~~~~~p  167 (185)
T 2qa9_E          109 GSVTALNATV-NYGGGD-VVY------GMIRTNVCA---------EPGDSGGPLYSGT----RAIGLTSGGSGNCSSGGT  167 (185)
T ss_dssp             EEEEEEEEEE-ECSTTC-EEE------EEEEESCCC---------CTTCTTCEEEETT----EEEEEEEEEEEETTTEEE
T ss_pred             eEEEEEEEEE-EcCCCC-EEe------ceEEecccC---------CCCCccceEEECC----EEEEEEEecCCCCCCCCc
Confidence            4577777775 333342 111      123467776         9999999999863    8999999997652     


Q ss_pred             c--eeeEEEEeecccc
Q psy13815         79 T--SVVQLLTRWTLDL   92 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~   92 (388)
                      +  ++++.|.+||...
T Consensus       168 ~vyt~v~~~~~wI~~~  183 (185)
T 2qa9_E          168 TFFQPVTEALSAYGVS  183 (185)
T ss_dssp             EEEEEHHHHHHHHTCE
T ss_pred             EEEEEHHHHHHhhCcE
Confidence            2  6777788898643

>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}

Probab=98.14  E-value=7.6e-06  Score=68.53  Aligned_cols=31  Identities=29%  Similarity=0.399  Sum_probs=26.0

Q ss_pred             EEEEccCCceeEEEEEe---eCCEEEecCcCCCC
Q psy13815        131 IVSLKRHGGHFCGGTII---HEQWIVTAAHCLCN  161 (388)
Q Consensus       131 ~v~i~~~~~~~C~GtLI---~~~~VLTAAhCv~~  161 (388)
                      ++.|+..+.++|.|+.+   ..+++|||+||+..
T Consensus        18 vv~l~~~d~h~G~g~~V~~~G~~~LlTA~Hv~~~   51 (191)
T 1zyo_A           18 LVAIKSGPTTIGFGCRTKIDGEDCLLTAHHVWCN   51 (191)
T ss_dssp             EEEEEETTEEEEEEEEEEC--CEEEEECHHHHTS
T ss_pred             EEEEEeCCeEEEEEEEEEECCCcEEEEChhhCcC
Confidence            77787777999999999   45799999999865

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=97.90  E-value=3e-06  Score=73.34  Aligned_cols=38  Identities=21%  Similarity=0.161  Sum_probs=32.2

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT   79 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~   79 (388)
                      ..|+||.        |.|||||||++..+++++|+||+|||.+|..
T Consensus       158 ~~~~Ca~--------~~GDSGGPlv~~~~g~~~lvGIvS~G~gc~~  195 (218)
T 3cp7_A          158 QGIPCNM--------TGGSSGGPWFLGNGTGGAQNSTNSYGYTFLP  195 (218)
T ss_dssp             EEEECCC--------CTTCTTCEEEESSSSSSCEEEECCEEETTEE
T ss_pred             EEecCCC--------CCCCcCCeeEEccCCCeEEEEEEccccCCCC
Confidence            3789983        5799999999986677899999999999954

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=97.56  E-value=1.3e-05  Score=71.65  Aligned_cols=53  Identities=15%  Similarity=0.139  Sum_probs=39.1

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc----eeeEEEEeecccccc
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT----SVVQLLTRWTLDLEV   94 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~----~~~~~~~~wi~~~~~   94 (388)
                      ..++|.+     .++|+|||||||++.   .++|+||+|||.+|..    ..+..|.+||.+.+.
T Consensus       155 ~~~i~~~-----~~~c~GdSGGPLv~~---~g~lvGIvS~G~~~~~~~~~~~~~~~~~wI~~~i~  211 (268)
T 1wcz_A          155 GEAMQYD-----LSTTGGNSGSPVFNE---KNEVIGIHWGGVPNEFNGAVFINENVRNFLKQNIE  211 (268)
T ss_dssp             TTEEEES-----BCCCTTCTTCEEECT---TSCEEEEEEEEETTTEEEEEECCHHHHHHHHHHCT
T ss_pred             CCeEEEe-----cccCCCCccCeEEcc---CCEEEEEEeCCccCCcceeEEcCHHHHHHHHHHHH
Confidence            4567763     578999999999963   2479999999988843    233557789986554

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=97.50  E-value=1.9e-05  Score=70.77  Aligned_cols=53  Identities=15%  Similarity=0.139  Sum_probs=38.6

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc----eeeEEEEeecccccc
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT----SVVQLLTRWTLDLEV   94 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~----~~~~~~~~wi~~~~~   94 (388)
                      ..++|.+     .+.|.|||||||++.   .++|+||+|||.+|..    ..+..|.+||.+.+.
T Consensus       155 ~~~i~~~-----~~~c~GdSGGPLv~~---~g~lvGIvS~G~~~~~~~~~~~~~~~~~wI~~~i~  211 (274)
T 2o8l_A          155 GEAMQYD-----LSTTGGNSGSPVFNE---KNEVIGIHWGGVPNEFNGAVFINENVRNFLKQNIE  211 (274)
T ss_dssp             TTEEEES-----CCCCTTCTTCEEECT---TSCEEEEEEEEETTTEEEEEECCHHHHHHHHHHCT
T ss_pred             CCeEEeC-----cccCCCCchhheecc---CCeEEEEEeCcccCCCCceEEecHHHHHHHHHHHh
Confidence            4466653     578999999999963   2479999999988843    223457789876554

>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3

Probab=97.41  E-value=0.001  Score=54.29  Aligned_cols=59  Identities=12%  Similarity=0.043  Sum_probs=38.9

Q ss_pred             EEEEccCCceeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEE
Q psy13815        131 IVSLKRHGGHFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIA  209 (388)
Q Consensus       131 ~v~i~~~~~~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIA  209 (388)
                      .|.+.-.....++|-.|+.+ +||||+|=+.+      ....+|+...        +.+.|...   +       ..|+|
T Consensus         6 ~~~v~g~~~G~GsgF~i~~~g~vVTA~HVv~~------~~~~~V~~~G--------~~~~Vgf~---~-------~~DlA   61 (198)
T 1mbm_A            6 VGFVAGSSYGTGSVWTRNNEVVVLTASHVVGR------ANMATLKIGD--------AMLTLTFK---K-------NGDFA   61 (198)
T ss_dssp             EEEEESSSEEEEEEEEETTEEEEEEEHHHHCT------TCEEEEEETT--------EEEEEECE---E-------ETTEE
T ss_pred             eEEEecccCCccceEEECCCeEEEEeeeEEcc------CceEEEEECC--------EEEEeecc---c-------CCcEE
Confidence            34555455667999999976 69999999965      3555566532        22332211   1       36999


Q ss_pred             EEEe
Q psy13815        210 LLEL  213 (388)
Q Consensus       210 Ll~L  213 (388)
                      ++++
T Consensus        62 ~l~v   65 (198)
T 1mbm_A           62 EAVT   65 (198)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9999

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=97.38  E-value=4e-05  Score=65.15  Aligned_cols=52  Identities=21%  Similarity=0.252  Sum_probs=35.1

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC--c---ee--eEEEEeeccccc
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP--T---SV--VQLLTRWTLDLE   93 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~--~---~~--~~~~~~wi~~~~   93 (388)
                      ..++|..     .+.|+|||||||++..   +.++||+||+.+|.  .   ..  .+.|.+||.+.+
T Consensus       140 ~~~~~~~-----~~~~~GdSGGPl~~~~---g~lvGI~s~g~~~~~~~~~~~v~~~~~~~~wI~~~~  198 (200)
T 2w7s_A          140 GTFMEFD-----AYAQPGNSGSPVLNSK---HELIGILYAGSGKDESEKNFGVYFTPQLKEFIQNNI  198 (200)
T ss_dssp             TTEEEEC-----SCCCTTCTTCEEECTT---SCEEEEEEEEC----CCCEEEEECCHHHHHHHHHTS
T ss_pred             CCEEEEc-----ceeCCCCccCeEECcC---CEEEEEEeccccCCCCccceeeecHHHHHHHHHhhc
Confidence            4567753     5789999999999632   37999999998762  2   11  145678987654

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=97.36  E-value=5.1e-05  Score=64.65  Aligned_cols=52  Identities=12%  Similarity=0.198  Sum_probs=36.8

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec---CCCce---e--eEEEEeeccccc
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI---GSPTS---V--VQLLTRWTLDLE   93 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~---~~~~~---~--~~~~~~wi~~~~   93 (388)
                      ..++|.+     .+.|+|||||||++.   .+.++||+|++.   .|...   .  .+.|.+||.+.+
T Consensus       143 ~~~~~~~-----~~~~~GdSGGPl~~~---~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~~  202 (204)
T 2vid_A          143 GSSIVYS-----AHTESGNSGSPVLNS---NNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENI  202 (204)
T ss_dssp             TTEEEEC-----CCCCGGGTTCEEECT---TSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHHS
T ss_pred             CCeEEEe-----cccCCCCccCcEECC---CCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhhc
Confidence            5677764     578999999999963   348999999997   35321   1  145778987654

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=96.52  E-value=0.00079  Score=58.90  Aligned_cols=30  Identities=13%  Similarity=0.191  Sum_probs=25.3

Q ss_pred             cCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC
Q psy13815         46 KDACWADSGGPLMLLGAESTQVIGLVSTGIGSP   78 (388)
Q Consensus        46 ~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~   78 (388)
                      .++|+|||||||++.   .+.++||+||+.+|.
T Consensus       188 ~~~c~GdSGGPl~~~---~g~lvGI~s~g~~c~  217 (242)
T 1agj_A          188 GFTVPGNSGSGIFNS---NGELVGIHSSKVSHL  217 (242)
T ss_dssp             CCCCGGGTTCEEECT---TSEEEEEEEEEEECS
T ss_pred             CCcCCCCCchHhccc---CCEEEEEEecccccc
Confidence            368999999999963   238999999999985

>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A

Probab=96.37  E-value=0.041  Score=45.73  Aligned_cols=33  Identities=27%  Similarity=0.059  Sum_probs=22.6

Q ss_pred             ceEEEEccCCceeEEEEEeeC-CEEEecCcCCCC
Q psy13815        129 PWIVSLKRHGGHFCGGTIIHE-QWIVTAAHCLCN  161 (388)
Q Consensus       129 Pw~v~i~~~~~~~C~GtLI~~-~~VLTAAhCv~~  161 (388)
                      |-.+.+.-......+|..|+. .+||||+|=+.+
T Consensus        19 ~N~v~V~G~~~GsGt~F~i~g~~~VvTA~HVVg~   52 (213)
T 3fan_A           19 LNTVNVVGSSMGSGGVFTIDGKIKCVTAAHVLTG   52 (213)
T ss_dssp             TTEEEEESSSEEEEEEEEETTEEEEEEEGGGSBT
T ss_pred             CCeEEEeecCCCceEEEEECCcEEEEEeccEeCC
Confidence            335555544455667777773 499999999976

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=96.21  E-value=0.0046  Score=51.33  Aligned_cols=27  Identities=41%  Similarity=0.514  Sum_probs=22.4

Q ss_pred             CCCCCCCCceEEeeCCcEEEEeeEEeecC-CC
Q psy13815         48 ACWADSGGPLMLLGAESTQVIGLVSTGIG-SP   78 (388)
Q Consensus        48 ~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~   78 (388)
                      .|+|||||||++.+    +++||+|++.+ |.
T Consensus       132 ~~~GDSGGPlv~~~----~~vGI~s~g~~~~~  159 (181)
T 2sga_A          132 AQPGDSGGSLFAGS----TALGLTSGGSGNCR  159 (181)
T ss_dssp             CCTTCTTCEEEETT----EEEEEEEEEEEETT
T ss_pred             cCCCCCCCEEEECC----EEEEEEEeeCCCCc
Confidence            36899999999864    89999999874 53

>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1

Probab=96.17  E-value=0.0047  Score=51.61  Aligned_cols=45  Identities=20%  Similarity=0.152  Sum_probs=32.4

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-CCceeeEEEEe
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-SPTSVVQLLTR   87 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~~~~~~~~~~   87 (388)
                      .+|+|+.     ...|.|||||||++.+    .++||.|++.. |.......|.+
T Consensus       129 ~~~i~t~-----~~~~~GdSGgpl~~~~----~~vGi~s~~~~~~~~~~~~~~~~  174 (187)
T 1hpg_A          129 YNMVRTT-----ACSAGGDSGGAHFAGS----VALGIHSGSSGCSGTAGSAIHQP  174 (187)
T ss_dssp             EEEEEEC-----CCCCTTCTTCEEEETT----EEEEEEEEESCCBTTBCCCEEEE
T ss_pred             eeeEEec-----cccCCCCCCCeEEECC----EEEEEEEeeCCCCCCCCceEEEE
Confidence            4578875     3578999999999764    89999999875 64333444443

>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A

Probab=96.05  E-value=0.09  Score=44.58  Aligned_cols=44  Identities=14%  Similarity=0.351  Sum_probs=32.5

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCC-chhHHhh
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTR-YIGWISD  383 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~-~~~WI~~  383 (388)
                      .|+=|.||+...++.  +|||.|.+..-..   -.+|+.+.. +.++|+.
T Consensus       156 ~G~CGlPlVs~~Dg~--IVGiHsl~~~~~~---~NyF~~f~~~f~~~L~~  200 (229)
T 1lvm_A          156 DGQCGSPLVSTRDGF--IVGIHSASNFTNT---NNYFTSVPKNFMELLTN  200 (229)
T ss_dssp             TTCTTCEEEETTTCC--EEEEEEEEETTSC---SEEEEECCTTHHHHHHC
T ss_pred             CCcCCCcEEECCCCc--EEEEEcccccCCC---eEEEeCCCHHHHHHHhc
Confidence            677799999987764  9999998754322   368999887 5466654

>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0

Probab=95.99  E-value=0.15  Score=43.53  Aligned_cols=37  Identities=14%  Similarity=0.299  Sum_probs=28.4

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCC
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTR  376 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~  376 (388)
                      .|+-|.||+...+|.  +|||.|.+..-.   .-.+|+.+..
T Consensus       148 ~G~CGlPlVs~~Dg~--IVGiHsl~~~~~---~~N~F~~f~~  184 (241)
T 3mmg_A          148 DGQAGSPLVSIIDGN--ILGIHSLTHTTN---GSNYFVEFPE  184 (241)
T ss_dssp             TTCTTCEEEETTTCC--EEEEEEEEETTT---CCEEEEECCT
T ss_pred             CCcCCCeEEEcCCCc--EEEEEecccCCC---CcEEEEcCCH
Confidence            788899999987764  999999875332   2368888876

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=95.95  E-value=0.0031  Score=53.82  Aligned_cols=36  Identities=28%  Similarity=0.409  Sum_probs=27.6

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCC
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGS   77 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~   77 (388)
                      ..++|+.     .+.|+|||||||++.. +  .++||+|++...
T Consensus       144 ~~~i~~~-----~~~~~GdSGGPlv~~~-g--~lvGI~s~g~~~  179 (210)
T 2as9_A          144 DNILNFD-----AYIEPGNSGSPVLNSN-N--EVIGVVYGGIGK  179 (210)
T ss_dssp             TTEEEEE-----CCCCTTCTTCEEECTT-S--CEEEEECCSCCC
T ss_pred             CCeEEEc-----CccCCCCccCcEECCC-C--eEEEEEeccccc
Confidence            3567764     4679999999999632 2  789999998753

>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}

Probab=95.55  E-value=0.011  Score=49.18  Aligned_cols=34  Identities=29%  Similarity=0.472  Sum_probs=25.8

Q ss_pred             CCCCCCceEEeeCCcEEEEeeEEeecC-CCceeeEEEEe
Q psy13815         50 WADSGGPLMLLGAESTQVIGLVSTGIG-SPTSVVQLLTR   87 (388)
Q Consensus        50 ~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~~~~~~~~~~   87 (388)
                      .|||||||++.+    .++||+|++.+ |....+..|.+
T Consensus       137 ~GDSGgpl~~~~----~~vGi~s~g~~~c~~~~~~~~~p  171 (186)
T 2pfe_A          137 GGDSGGPWLTGS----QAQGVTSGGTGDCRSGGITFFQP  171 (186)
T ss_dssp             TTCTTCEEEETT----EEEEEEEEEEEETTTEEEEEEEE
T ss_pred             CCCccCeEEECC----EEEEEEeecCCCCCCCCcEEEEE
Confidence            699999999744    79999999864 65444555555

>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}

Probab=95.25  E-value=0.016  Score=48.37  Aligned_cols=34  Identities=32%  Similarity=0.406  Sum_probs=25.9

Q ss_pred             CCCCCCceEEeeCCcEEEEeeEEeecC-CCceeeEEEEe
Q psy13815         50 WADSGGPLMLLGAESTQVIGLVSTGIG-SPTSVVQLLTR   87 (388)
Q Consensus        50 ~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~~~~~~~~~~   87 (388)
                      .|||||||++.+    .++||+|++.+ |....+..|.+
T Consensus       134 ~GDSGgpl~~~~----~~vGi~s~~~~~c~~~~~~~~~p  168 (189)
T 2ea3_A          134 PGDSGGSLLAGN----QAQGVTSGGSGNCRTGGTTFFQP  168 (189)
T ss_dssp             TTCTTCEEEETT----EEEEEEEEEEEETTTEEEEEEEE
T ss_pred             CCCccCeEEECC----EEEEEEeecCCCCCCCCcEEEEE
Confidence            799999999743    79999999875 65444555554

>3syj_A Adhesion and penetration protein autotransporter; bacterial aggregation and biofilm formation, SELF-associatin autotransporter (SAAT); 2.20A {Haemophilus influenzae}

Probab=95.06  E-value=0.11  Score=52.83  Aligned_cols=48  Identities=13%  Similarity=0.329  Sum_probs=28.8

Q ss_pred             CCcCCCceEEec--CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        335 QADSGGPLMLLG--AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       335 ~gdsGgPL~~~~--~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      .||||+||+.-+  +++|+|+|+++.+.+....  -.-|+-+  ..+|+++++.
T Consensus       215 ~GDSGSPLFayD~~~~KWvl~Gv~~~~~~~~g~--~n~~~i~--~~~f~~~~~~  264 (1011)
T 3syj_A          215 KGDSGSPMFIYDAEKQKWLINGILREGNPFEGK--ENGFQLV--RKSYFDEIFE  264 (1011)
T ss_dssp             TTCTTCEEEEEETTTTEEEEEEEECC----------EEEEEC--CHHHHHHHHH
T ss_pred             CCCCCCcceeeEcCCCeEEEEEEeeccccccCc--ccceEEe--chHHhhhhhh
Confidence            899999998843  5799999999876443321  1234322  2467766653

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=94.81  E-value=0.015  Score=50.83  Aligned_cols=29  Identities=24%  Similarity=0.266  Sum_probs=23.5

Q ss_pred             cCCCCCCCCCceEEeeCCcEEEEeeEEeecCC
Q psy13815         46 KDACWADSGGPLMLLGAESTQVIGLVSTGIGS   77 (388)
Q Consensus        46 ~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~   77 (388)
                      .++|+|||||||+..   ...++||+|++...
T Consensus       179 ~~~~~GdSGGPlv~~---~g~lvGI~s~g~~~  207 (246)
T 1qtf_A          179 GYTEVGNSGSGIFNL---KGELIGIHSGKGGQ  207 (246)
T ss_dssp             SCCCGGGTTCEEECT---TCCEEEEEEEEETT
T ss_pred             CCCCCCCchhheECC---CCEEEEEEeccccC
Confidence            467999999999963   23799999998754

>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}

Probab=94.55  E-value=0.032  Score=46.54  Aligned_cols=34  Identities=29%  Similarity=0.353  Sum_probs=25.8

Q ss_pred             CCCCCCceEEeeCCcEEEEeeEEeecC-CCceeeEEEEe
Q psy13815         50 WADSGGPLMLLGAESTQVIGLVSTGIG-SPTSVVQLLTR   87 (388)
Q Consensus        50 ~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~~~~~~~~~~   87 (388)
                      .|||||||++.+    .++||+|++.+ |....+.+|.+
T Consensus       140 ~GDSGgpl~~~~----~~vGi~s~~~~~~~~~~~~~~~p  174 (188)
T 2oua_A          140 PGDSGGSFISGT----QAQGVTSGGSGNCRTGGTTFYQE  174 (188)
T ss_dssp             TTCTTCEEEETT----EEEEEEEEEEEETTTEEEEEEEE
T ss_pred             CCCccceEEECC----EEEEEEeccCCCCCCCCceEEEE
Confidence            699999999644    79999999864 65445566655

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=92.77  E-value=0.041  Score=47.64  Aligned_cols=28  Identities=43%  Similarity=0.536  Sum_probs=22.4

Q ss_pred             cCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         46 KDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        46 ~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ...|.|||||||+... +  .++||++++..
T Consensus       176 ~~~~~GdSGGPLv~~~-G--~vvGI~s~~~~  203 (237)
T 3k6y_A          176 ADVEQGDSGGPLIDLN-G--QVLGVVFGAAI  203 (237)
T ss_dssp             SCCCTTCTTCEEECTT-S--CEEEEEEEECS
T ss_pred             CccCCCccHHHEECCC-C--EEEEEEEeecc
Confidence            4679999999999632 2  69999998764

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=92.60  E-value=0.068  Score=46.36  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=27.1

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ..++|+.     ...|.|||||||+.. ++  .++||.+++..
T Consensus       169 ~~~i~td-----a~i~~G~SGGPLv~~-~G--~vvGI~s~~~~  203 (239)
T 1l1j_A          169 VGLIQTD-----AAINPGNSGGPLLNI-HG--EVIGINTAIVN  203 (239)
T ss_dssp             EEEEEES-----SCCCTTTTTSEEECS-SS--EEEEEECCCSC
T ss_pred             CCEEEEC-----CCCCCCCccHHhccC-CC--eEEEEEeeeec
Confidence            3578874     467999999999953 22  89999998764

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=91.04  E-value=0.12  Score=47.03  Aligned_cols=35  Identities=20%  Similarity=0.234  Sum_probs=27.4

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ..++|+.     ...|.|||||||+... +  .++||.+++..
T Consensus       155 ~~~i~~d-----~~~~~G~SGGPlv~~~-G--~vvGI~s~~~~  189 (324)
T 1y8t_A          155 LDAIQTD-----AAINPGNSGGALVNMN-A--QLVGVNSAIAT  189 (324)
T ss_dssp             EEEEEEC-----SCCCTTCTTEEEECTT-S--EEEEEEEEECC
T ss_pred             CCEEEEc-----CCCCCCCccCcEECCC-C--eEEEEEeeecc
Confidence            4688984     4679999999999642 2  89999998653

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=90.05  E-value=0.21  Score=45.44  Aligned_cols=55  Identities=20%  Similarity=0.299  Sum_probs=34.6

Q ss_pred             EEEeeeChhhhHhh-hhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec
Q psy13815          9 VALSVVSNQVCQAW-YQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI   75 (388)
Q Consensus         9 ~~~~v~~~~~C~~~-~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~   75 (388)
                      +...+++...|... ++.    ......++|+.     ...|.|||||||+... +  .++||.+++.
T Consensus       137 v~~G~vs~~~~~~~~~g~----~~~~~~~i~~d-----~~~~~G~SGGPl~~~~-G--~vVGI~s~~~  192 (325)
T 1lcy_A          137 ITSGIVSSAQRPARDLGL----PQTNVEYIQTD-----AAIDFGNAGGPLVNLD-G--EVIGVNTMKV  192 (325)
T ss_dssp             CEEEEBCSCSCC-------------CCCCEEES-----SCCSTTTTTSEEEETT-S--CEEEEEEEEE
T ss_pred             EEeEEEecccccccccCC----CCCCCCEEEEc-----CCCCCCCccccEECCC-C--EEEEEEeEee
Confidence            44556666666321 111    01346789985     3679999999999632 3  7999999875

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=88.55  E-value=0.24  Score=44.83  Aligned_cols=35  Identities=14%  Similarity=0.284  Sum_probs=27.0

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ..++|+.     ...|.|||||||+.. ++  .++||.+++..
T Consensus       151 ~~~i~~d-----~~~~~G~SGGPl~~~-~G--~vvGI~s~~~~  185 (318)
T 1te0_A          151 QNFLQTD-----ASINHGNSGGALVNS-LG--ELMGINTLSFD  185 (318)
T ss_dssp             CCSEEES-----SCCCTTTTTSEEECT-TC--CEEEEEECCSS
T ss_pred             CCEEEEC-----CCCCCCCCcCceECC-CC--eEEEEEeeeec
Confidence            4678874     467999999999963 22  79999998764

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=88.29  E-value=0.18  Score=43.46  Aligned_cols=28  Identities=29%  Similarity=0.539  Sum_probs=21.8

Q ss_pred             cCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         46 KDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        46 ~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ...|.|||||||+... +  .++||.+++..
T Consensus       182 a~i~~G~SGGPLv~~~-G--~vVGI~s~~~~  209 (231)
T 3tjo_A          182 AIINYGNAGGPLVNLD-G--EVIGINTLKVT  209 (231)
T ss_dssp             SCCCTTTTTSEEECTT-S--CEEEEEEEEEE
T ss_pred             CCcCCCCchhHeecCC-C--eEEEEEeEEec
Confidence            3568999999999532 2  69999998764

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=86.59  E-value=0.26  Score=42.53  Aligned_cols=28  Identities=18%  Similarity=0.341  Sum_probs=21.8

Q ss_pred             cCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         46 KDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        46 ~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ...|.|||||||+.. ++  .++||++++..
T Consensus       169 ~~i~~G~SGGPlv~~-~G--~vvGI~s~~~~  196 (237)
T 3lgi_A          169 ASINHGNSGGALVNS-LG--ELMGINTLSFD  196 (237)
T ss_dssp             SCCCTTCTTCEEECT-TC--CEEEEECCCCC
T ss_pred             CccCCCCchHHeeCC-CC--eEEEEEeeeec
Confidence            356999999999953 23  79999998654

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=83.73  E-value=0.49  Score=43.37  Aligned_cols=28  Identities=25%  Similarity=0.343  Sum_probs=22.2

Q ss_pred             cCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         46 KDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        46 ~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ...|.|||||||+.. ++  .++||.|++..
T Consensus       173 a~i~~G~SGGPLvn~-~G--~vvGI~s~~~~  200 (348)
T 3qo6_A          173 AAINPGNSGGPLLDS-SG--TLIGINTAIYS  200 (348)
T ss_dssp             SCCCTTCTTCEEECT-TS--CEEEEEEEEEC
T ss_pred             CCcCCCCcHHHhhCC-CC--eEEEEEEeeec
Confidence            467999999999963 22  69999998754

>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}

Probab=81.83  E-value=1.4  Score=34.17  Aligned_cols=26  Identities=23%  Similarity=0.359  Sum_probs=24.3

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecC
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGI  360 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~  360 (388)
                      +||-|.|-++..++.|+++||...+.
T Consensus       138 PGDCGcPYvykrgn~~vv~GVHtAat  163 (185)
T 4ash_A          138 PGDAGCPYVYKKGNTWVVIGVHVAAT  163 (185)
T ss_dssp             TTCTTCEEEEEETTEEEEEEEEEEEC
T ss_pred             CCCCCCceEEeeCCceEEEEEEEeec
Confidence            89999999999999999999998765

>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}

Probab=80.70  E-value=0.86  Score=39.48  Aligned_cols=35  Identities=23%  Similarity=0.376  Sum_probs=24.8

Q ss_pred             CCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         34 ESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        34 ~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ..++|+.     ...|.|+|||||+.. ++  .++||.++...
T Consensus       173 ~~~i~td-----a~i~~G~SGGPLvn~-~G--~vVGI~s~~~~  207 (245)
T 3sti_A          173 ENFIQTD-----ASINRGNSGGALLNL-NG--ELIGINTAILA  207 (245)
T ss_dssp             SSCEEES-----SCCCTTTTTSEEECT-TS--CEEEEEECCC-
T ss_pred             cCEEEEc-----CCcCCCcchhHeecC-CC--eEEEEEEeEEC
Confidence            3456653     356899999999943 22  79999998654

>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...

Probab=80.66  E-value=0.57  Score=39.17  Aligned_cols=23  Identities=39%  Similarity=0.511  Sum_probs=18.2

Q ss_pred             CCCCCCceEEeeCCcEEEEeeEEeec
Q psy13815         50 WADSGGPLMLLGAESTQVIGLVSTGI   75 (388)
Q Consensus        50 ~gdsGgpl~~~~~~~~~~~Gi~s~~~   75 (388)
                      .|||||||+.. ++  +++||.|++.
T Consensus       140 ~GDSGGPl~~~-~g--~~vGI~s~~~  162 (198)
T 2h5c_A          140 RGDSGGSWITS-AG--QAQGVMSGGN  162 (198)
T ss_dssp             TTCTTCEEECT-TC--BEEEEEEEEC
T ss_pred             CCcceeEEEee-CC--EEEEEEEeec
Confidence            69999999942 22  7999999874

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=80.08  E-value=0.91  Score=41.25  Aligned_cols=27  Identities=30%  Similarity=0.564  Sum_probs=21.5

Q ss_pred             CCCCCCCCCceEEeeCCcEEEEeeEEeecC
Q psy13815         47 DACWADSGGPLMLLGAESTQVIGLVSTGIG   76 (388)
Q Consensus        47 ~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~   76 (388)
                      ..|.|||||||+... +  .++||.+++..
T Consensus       166 ~i~~G~SGGPlv~~~-G--~vvGI~s~~~~  192 (332)
T 3num_A          166 IINYGNAGGPLVNLD-G--EVIGINTLKVT  192 (332)
T ss_dssp             CCCTTTTTSEEEETT-S--CEEEEEEEEEE
T ss_pred             CcCCCCcHHHhhCCC-C--cEEEEEeeEec
Confidence            568899999999642 2  69999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	388
g2pka.1	232	b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [T	6e-47
g2pka.1	232	b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [T	3e-09
d1z8ga1	255	b.47.1.2 (A:163-417) Hepsin, catalytic domain {Hum	9e-46
d1z8ga1	255	b.47.1.2 (A:163-417) Hepsin, catalytic domain {Hum	5e-06
d1ekbb_	235	b.47.1.2 (B:) Enteropeptidase (enterokinase light	4e-45
d1ekbb_	235	b.47.1.2 (B:) Enteropeptidase (enterokinase light	3e-06
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	2e-44
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	1e-07
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	4e-44
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	4e-08
d1rfna_	235	b.47.1.2 (A:) Coagulation factor IXa, protease dom	2e-41
d1rfna_	235	b.47.1.2 (A:) Coagulation factor IXa, protease dom	4e-05
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	4e-41
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	1e-09
d1ao5a_	237	b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus)	5e-41
d1ao5a_	237	b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus)	9e-07
d1eaxa_	241	b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapien	8e-41
d1eaxa_	241	b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapien	3e-05
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	4e-40
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	5e-06
d2fpza1	243	b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sap	5e-40
d2fpza1	243	b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sap	1e-05
d1npma_	225	b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [Tax	7e-40
d1npma_	225	b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [Tax	4e-07
d1rjxb_	247	b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Hum	9e-39
d1rjxb_	247	b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Hum	5e-07
d1mzaa_	240	b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [Ta	1e-38
d1mzaa_	240	b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [Ta	3e-07
g1h8d.1	289	b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [T	2e-38
g1h8d.1	289	b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [T	0.001
d1fxya_	228	b.47.1.2 (A:) Coagulation factor Xa-trypsin chimer	3e-38
d1fxya_	228	b.47.1.2 (A:) Coagulation factor Xa-trypsin chimer	5e-06
d1lo6a_	221	b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [	9e-38
d1lo6a_	221	b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [	3e-04
d1tona_	235	b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 1	2e-37
d1tona_	235	b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 1	2e-06
d2bz6h1	254	b.47.1.2 (H:16-257) Coagulation factor VIIa {Human	2e-37
d1gdna_	224	b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxyspo	3e-37
d1gdna_	224	b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxyspo	4e-06
g1gg6.1	238	b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(oge	4e-37
g1gg6.1	238	b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(oge	9e-06
d1sgfa_	228	b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus	5e-37
d1sgfa_	228	b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus	2e-06
d1pytd_	251	b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Co	1e-36
d1pytd_	251	b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Co	1e-05
g1fiw.1	274	b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries)	2e-36
g1fiw.1	274	b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries)	5e-04
d1rrka1	287	b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens	8e-36
d1rrka1	287	b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens	8e-06
d1orfa_	232	b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [Ta	1e-35
d1orfa_	232	b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [Ta	3e-06
d1autc_	240	b.47.1.2 (C:) Activated protein c (autoprothrombin	6e-35
d2qy0b1	240	b.47.1.2 (B:447-686) Complement C1R protease, cata	3e-34
d2qy0b1	240	b.47.1.2 (B:447-686) Complement C1R protease, cata	2e-04
d2p3ub1	233	b.47.1.2 (B:16-243) Coagulation factor Xa, proteas	6e-34
d1gvza_	237	b.47.1.2 (A:) Prostate specific antigen (PSA kalli	8e-34
g1rtf.1	260	b.47.1.2 (A:,B:) Two-chain tissue plasminogen acti	1e-33
g1rtf.1	260	b.47.1.2 (A:,B:) Two-chain tissue plasminogen acti	1e-04
d1hj9a_	223	b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [Tax	6e-33
d1bioa_	228	b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxI	1e-32
d1op0a_	234	b.47.1.2 (A:) Venom serine protease {Hundred-pace	3e-32
g1gj7.1	256	b.47.1.2 (A:,B:) Urokinase-type plasminogen activa	4e-32
g1gj7.1	256	b.47.1.2 (A:,B:) Urokinase-type plasminogen activa	1e-06
d1q3xa1	242	b.47.1.2 (A:445-686) Mannan-binding lectin serine	2e-31
d1si5h_	234	b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human	3e-31
d1si5h_	234	b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human	9e-04
d1eq9a_	222	b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Re	8e-31
d1gvkb_	240	b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9	1e-30
d1azza_	226	b.47.1.2 (A:) Crab collagenase {Atlantic sand fidd	2e-30
d1azza_	226	b.47.1.2 (A:) Crab collagenase {Atlantic sand fidd	0.002
d1brup_	241	b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9	1e-29
d3rp2a_	224	b.47.1.2 (A:) Chymase II (mast cell proteinase II)	2e-29
d1fi8a_	227	b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus)	4e-29
d1fi8a_	227	b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus)	0.002
d1fq3a_	227	b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [Ta	1e-28
d1elta_	236	b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxI	2e-27
d1os8a_	223	b.47.1.1 (A:) Trypsin {Streptomyces griseus, strai	3e-27
d1fona_	232	b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III	4e-27
d1eufa_	224	b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId:	1e-26
d1m9ua_	241	b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [Tax	2e-26
d1elva1	259	b.47.1.2 (A:410-668) Complement C1S protease, cata	2e-26
d2z7fe1	218	b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens)	3e-25
d1a7sa_	225	b.47.1.2 (A:) Heparin binding protein, HBP {Human	3e-24
d1t32a1	224	b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapie	3e-24
d1nn6a_	224	b.47.1.2 (A:) Chymase (mast cell protease I) {Huma	5e-24
d1fuja_	221	b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapie	2e-23
d2hlca_	230	b.47.1.2 (A:) HL collagenase {Common cattle grub (	1e-20
d1p3ca_	215	b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus int	5e-19
d1arba_	263	b.47.1.1 (A:) Achromobacter protease {Achromobacte	5e-17
d1agja_	242	b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A	3e-07
d2o8la1	216	b.47.1.1 (A:1-216) V8 protease {Staphylococcus aur	1e-06
d1hpga_	187	b.47.1.1 (A:) Glutamic acid-specific protease {Str	3e-06
d1hpga_	187	b.47.1.1 (A:) Glutamic acid-specific protease {Str	0.001
d1qtfa_	246	b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus	5e-04

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 255

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (393), Expect = 9e-46
 Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 41/279 (14%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG   + G +PW VSL+  G H CGG+++   W++TAAHC       L  S+  V   
Sbjct: 1   IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVL--SRWRVFAG 58

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSC------SSFNNDIALLELTRSIQWSDLIRPACLPS 230
               + P    + V  +++H  +           +NDIAL+ L+  +  ++ I+P CLP+
Sbjct: 59  AVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPA 118

Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
                 +  + TV GWG T      G+++ +LQ+  + ++SN VC            +K 
Sbjct: 119 AGQALVDGKICTVTGWGNTQYY---GQQAGVLQEARVPIISNDVCNGADFYGN---QIKP 172

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
              CAG+ +GG DAC        P V    +  + R                        
Sbjct: 173 KMFCAGYPEGGIDACQGDSGG--PFVCEDSISRTPR------------------------ 206

Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
            ++ G+VS G GCA  + PG+YT+++ +  WI   +  H
Sbjct: 207 WRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTH 245

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 255

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 5e-06
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
            +LQ+  + ++SN VC            +K    CAG+ +GG DAC  DSGGP +   + 
Sbjct: 145 GVLQEARVPIISNDVCNGADFYGN---QIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSI 201

Query: 64  ST----QVIGLVSTGIG 76
           S     ++ G+VS G G
Sbjct: 202 SRTPRWRLCGIVSWGTG 218

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  153 bits (387), Expect = 4e-45
 Identities = 80/271 (29%), Positives = 129/271 (47%), Gaps = 39/271 (14%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV-TL 175
           IVGG  +  G +PW+V+L       CG +++   W+V+AAHC+       S  +  +   
Sbjct: 1   IVGGSDSREGAWPWVVALYFDDQQVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAVLGLH 60

Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
              +L+ P I T  + +I+ +P ++    NNDIA++ L   + ++D I+P CLP  +  +
Sbjct: 61  MASNLTSPQIETRLIDQIVINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLPEENQVF 120

Query: 236 SEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
               + ++AGWG       QG  +++LQ+  + ++SN+ CQ          N+ E+ +CA
Sbjct: 121 PPGRICSIAGWGALIY---QGSTADVLQEADVPLLSNEKCQQQMPE----YNITENMVCA 173

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G+E GG D+C                              Q DSGGPLM        + G
Sbjct: 174 GYEAGGVDSC------------------------------QGDSGGPLMCQENNRWLLAG 203

Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           + S G  CA P  PG+Y R+ R+  WI   L
Sbjct: 204 VTSFGYQCALPNRPGVYARVPRFTEWIQSFL 234

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.8 bits (107), Expect = 3e-06
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
           ++LQ+  + ++SN+ CQ          N+ E+ +CAG+E GG D+C  DSGGPLM     
Sbjct: 142 DVLQEADVPLLSNEKCQQQMPE----YNITENMVCAGYEAGGVDSCQGDSGGPLMCQENN 197

Query: 64  STQVIGLVSTGIG 76
              + G+ S G  
Sbjct: 198 RWLLAGVTSFGYQ 210

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score =  151 bits (381), Expect = 2e-44
 Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 50/269 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P  VSL   G HFCGG++++E W+V+AAHC  +        ++ +   
Sbjct: 1   IVGGYECKAYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCYKSRV------EVRLGEH 53

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
              ++  S   +   R++ HP++S  + +NDI L++L++    +  ++P  LP+      
Sbjct: 54  NIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAPAG 113

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
                       +         N LQ + + ++S   C   Y        +  +  CAG+
Sbjct: 114 TMCTVSGWGNTMSSTADS----NKLQCLNIPILSYSDCNNSYPG-----MITNAMFCAGY 164

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +GGKD+C                              Q DSGGP++  G    ++ G+V
Sbjct: 165 LEGGKDSC------------------------------QGDSGGPVVCNG----ELQGVV 190

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G GCA P  PG+Y ++  +  W++ T+
Sbjct: 191 SWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score = 50.0 bits (118), Expect = 1e-07
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 9/73 (12%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
           N LQ + + ++S   C   Y        +  +  CAG+ +GGKD+C  DSGGP++  G  
Sbjct: 132 NKLQCLNIPILSYSDCNNSYPG-----MITNAMFCAGYLEGGKDSCQGDSGGPVVCNG-- 184

Query: 64  STQVIGLVSTGIG 76
             ++ G+VS G G
Sbjct: 185 --ELQGVVSWGYG 195

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score =  150 bits (380), Expect = 4e-44
 Identities = 85/273 (31%), Positives = 131/273 (47%), Gaps = 43/273 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKR----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           IVGG  A  GEFP+ +S +        HFCG +I +E + +TA HC+        +    
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60

Query: 173 VTLKEHDLSRPSISTV-PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           V  +           +  V +I+ H +   +  +NDI+LL+L+ S+ ++D + P  LP  
Sbjct: 61  VAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQ 120

Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
               +   V V GWG T+E    G   ++LQKV + +VS++ C+A Y ++     + +S 
Sbjct: 121 G-HTATGDVIVTGWGTTSEG---GNTPDVLQKVTVPLVSDEDCRADYGAD----EILDSM 172

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG  +GGKD+C                              Q DSGGPL      ST 
Sbjct: 173 ICAGVPEGGKDSC------------------------------QGDSGGPLAASDTGSTY 202

Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
           + G+VS G GCARP  PG+YT ++ ++ WI   
Sbjct: 203 LAGIVSWGYGCARPGYPGVYTEVSYHVDWIKAN 235

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score = 51.2 bits (121), Expect = 4e-08
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            ++LQKV + +VS++ C+A Y ++     + +S +CAG  +GGKD+C  DSGGPL     
Sbjct: 143 PDVLQKVTVPLVSDEDCRADYGAD----EILDSMICAGVPEGGKDSCQGDSGGPLAASDT 198

Query: 63  ESTQVIGLVSTGIG 76
            ST + G+VS G G
Sbjct: 199 GSTYLAGIVSWGYG 212

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (361), Expect = 2e-41
 Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 41/273 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A PG+FPW V L      FCGG+I++E+WIVTAAHC+  G        +     
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKI----TVVAGEH 56

Query: 177 EHDLSRPSISTVPVLRIMFHPSH--SCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
             + +  +     V+RI+ H ++  + + +N+DIALLEL   +  +  + P C+      
Sbjct: 57  NIEETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYT 116

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
                              +GR + +LQ + + +V    C         K  +  +  CA
Sbjct: 117 NIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRST-----KFTIYNNMFCA 171

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +GG+D+C                              Q DSGGP +     ++ + G
Sbjct: 172 GFHEGGRDSC------------------------------QGDSGGPHVTEVEGTSFLTG 201

Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
           ++S G  CA     G+YT+++RY+ WI +   +
Sbjct: 202 IISWGEECAMKGKYGIYTKVSRYVNWIKEKTKL 234

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (98), Expect = 4e-05
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
            +LQ + + +V    C         K  +  +  CAG  +GG+D+C  DSGGP +     
Sbjct: 141 LVLQYLRVPLVDRATCLRST-----KFTIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEG 195

Query: 64  STQVIGLVSTGIG 76
           ++ + G++S G  
Sbjct: 196 TSFLTGIISWGEE 208

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (359), Expect = 4e-41
 Identities = 87/273 (31%), Positives = 125/273 (45%), Gaps = 42/273 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG A+  GE+PW V+L        H CGG+II  QWI+TAAHC     SP      + 
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
            L + ++   + S   V  I+ H  +  +    DIALL+L  ++ ++D  RP CLPS   
Sbjct: 61  ILNQSEIKEDT-SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGD 119

Query: 234 DYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
                +   V GWG+           N LQK  + +V+N+ CQ  Y+       +    +
Sbjct: 120 RNVIYTDCWVTGWGYRKLRDKI---QNTLQKAKIPLVTNEECQKRYRGH----KITHKMI 172

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           CAG+ +GGKDAC                              + DSGGPL     E   +
Sbjct: 173 CAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVWHL 202

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +G+ S G GCA+   PG+YT +  Y+ WI +  
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 235

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (133), Expect = 1e-09
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            N LQK  + +V+N+ CQ  Y+       +    +CAG+ +GGKDAC  DSGGPL     
Sbjct: 142 QNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDACKGDSGGPLSCKHN 197

Query: 63  ESTQVIGLVSTGIG 76
           E   ++G+ S G G
Sbjct: 198 EVWHLVGITSWGEG 211

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  142 bits (359), Expect = 5e-41
 Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 64/283 (22%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG        PW V++     H CGG ++   W++TAAHC           Q  V L 
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCY--------VDQYEVWLG 52

Query: 177 EHDLSRPSISTVPVL-------------RIMFHPSHSCSSFNNDIALLELTRSIQWSDLI 223
           ++ L +   S    L              +M       + F++D+ LL L++    +D++
Sbjct: 53  KNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVV 112

Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
           +P  LP+       + +     GW +  P++ ++ + LQ V ++++ N+ C   Y     
Sbjct: 113 KPIALPTKEPKPGSKCLA---SGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQ--- 166

Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
              V +  +CAG   GGKD C                              + DSGGPL+
Sbjct: 167 --KVTDVMLCAGEMGGGKDTC------------------------------RDDSGGPLI 194

Query: 344 LLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
             G     + G  S G + C +P +P +YT L ++  WI DT+
Sbjct: 195 CDG----ILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTM 233

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.3 bits (111), Expect = 9e-07
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 9/75 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + LQ V ++++ N+ C   Y        V +  +CAG   GGKD C  DSGGPL+  G 
Sbjct: 144 PDDLQCVFITLLPNENCAKVYLQ-----KVTDVMLCAGEMGGGKDTCRDDSGGPLICDG- 197

Query: 63  ESTQVIGLVSTGIGS 77
               + G  S G   
Sbjct: 198 ---ILQGTTSYGPVP 209

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 8e-41
 Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 42/277 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCNGPS-----PLSASQ 170
           +VGG  A+ GE+PW VSL   G GH CG ++I   W+V+AAHC  +        P   + 
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60

Query: 171 INVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
                 +   S P +    + RI+ HP  +  +F+ DIALLEL +  ++S ++RP CLP 
Sbjct: 61  FLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPD 120

Query: 231 GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
            S  +              +    G    ILQK  + V++   C+           +   
Sbjct: 121 ASHVFPAGKAIWVTGWGHTQYGGTGA--LILQKGEIRVINQTTCENLLPQ-----QITPR 173

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            MC G   GG D+C                      G    P    ++ G +        
Sbjct: 174 MMCVGFLSGGVDSCQ---------------------GDSGGPLSSVEADGRIFQ------ 206

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
              G+VS G GCA+   PG+YTRL  +  WI +   +
Sbjct: 207 --AGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENTGV 241

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 3e-05
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 6/74 (8%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
            ILQK  + V++   C+           +    MC G   GG D+C  DSGGPL  + A+
Sbjct: 147 LILQKGEIRVINQTTCENLLPQ-----QITPRMMCVGFLSGGVDSCQGDSGGPLSSVEAD 201

Query: 64  ST-QVIGLVSTGIG 76
                 G+VS G G
Sbjct: 202 GRIFQAGVVSWGDG 215

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  139 bits (351), Expect = 4e-40
 Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 49/269 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I++QW+V+AAHC  +             L+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLE 59

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
            ++    +   +       HP+    ++NNDI L++L+  ++ +  +    LPS S   +
Sbjct: 60  GNEQFVNAAKII------KHPNFDRETYNNDIMLIKLSSPVKLNARVATVALPS-SCAPA 112

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
                ++GWG T  +       ++LQ +   ++    C+A          + ++ +C G 
Sbjct: 113 GTQCLISGWGNTLSS--GVNEPDLLQCLDAPLLPQADCEASSSF-----IITDNMVCVGF 165

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +GGKDAC                              Q DSGGP++  G    ++ G+V
Sbjct: 166 LEGGKDAC------------------------------QGDSGGPVVCNG----ELQGIV 191

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G GCA P  PG+YT++  Y+ WI DT+
Sbjct: 192 SWGYGCALPDNPGVYTKVCNYVDWIQDTI 220

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.0 bits (105), Expect = 5e-06
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 9/75 (12%)

Query: 2   RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG 61
             ++LQ +   ++    C+A          + ++ +C G  +GGKDAC  DSGGP++  G
Sbjct: 131 EPDLLQCLDAPLLPQADCEASSSF-----IITDNMVCVGFLEGGKDACQGDSGGPVVCNG 185

Query: 62  AESTQVIGLVSTGIG 76
               ++ G+VS G G
Sbjct: 186 ----ELQGIVSWGYG 196

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (353), Expect = 5e-40
 Identities = 79/275 (28%), Positives = 119/275 (43%), Gaps = 40/275 (14%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A   ++PW VSL+ HG    HFCGG++IH QW++TAAHC+      L+A ++ +
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQL 60

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +           +PV RI+ HP    +    DIALLEL   ++ S  +    LP  S 
Sbjct: 61  REQHLY---YQDQLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASE 117

Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA---WYQSEGKKINVKES 290
            +              +N  +      L++V + ++ N +C A        G  + +   
Sbjct: 118 TFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRD 177

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
            M        +D+C                              Q DSGGPL+     + 
Sbjct: 178 DMLCAGN-TRRDSC------------------------------QGDSGGPLVCKVNGTW 206

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
              G+VS G GCA+P  PG+YTR+T Y+ WI   +
Sbjct: 207 LQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (101), Expect = 1e-05
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 3   SNILQKVALSVVSNQVCQA---WYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLML 59
              L++V + ++ N +C A        G  + +    M        +D+C  DSGGPL+ 
Sbjct: 142 PFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGN-TRRDSCQGDSGGPLVC 200

Query: 60  LGAESTQVIGLVSTGIG 76
               +    G+VS G G
Sbjct: 201 KVNGTWLQAGVVSWGEG 217

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  139 bits (350), Expect = 7e-40
 Identities = 67/271 (24%), Positives = 105/271 (38%), Gaps = 47/271 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+ G    P   PW  +L +     CGG ++ ++W++TAAHC     S       + +L+
Sbjct: 1   ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQKYSV---RLGDHSLQ 57

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             D     I     ++   + + +    ++DI L+ L  S    D ++P  L +      
Sbjct: 58  SRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLC-PKV 116

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
            Q   ++GWG       Q    N L    + + S   C+  Y        + E  +CAG 
Sbjct: 117 GQKCIISGWGTVTSP--QENFPNTLNCAEVKIYSQNKCERAYPG-----KITEGMVCAGS 169

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
              G D C                              Q DSGGPL+  G     + G+ 
Sbjct: 170 S-NGADTC------------------------------QGDSGGPLVCDG----MLQGIT 194

Query: 357 STGIG-CARPRLPGLYTRLTRYIGWISDTLD 386
           S G   C +P  PG+YT++ RY  WI  T+D
Sbjct: 195 SWGSDPCGKPEKPGVYTKICRYTTWIKKTMD 225

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.1 bits (113), Expect = 4e-07
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 10/76 (13%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
              N L    + + S   C+  Y        + E  +CAG    G D C  DSGGPL+  
Sbjct: 134 NFPNTLNCAEVKIYSQNKCERAYPG-----KITEGMVCAGSS-NGADTCQGDSGGPLVCD 187

Query: 61  GAESTQVIGLVSTGIG 76
           G     + G+ S G  
Sbjct: 188 G----MLQGITSWGSD 199

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 247

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (344), Expect = 9e-39
 Identities = 87/286 (30%), Positives = 131/286 (45%), Gaps = 48/286 (16%)

Query: 104 PCGRSLASRRT--GKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLC 160
            CG+     +   G +VGG  A P  +PW VSL+ R G HFCGGT+I  +W++TAAHCL 
Sbjct: 3   DCGKPQVEPKKCPGAVVGGCVAYPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 62

Query: 161 NGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWS 220
             P P S             +   ++  P ++ +            DIALL+L+     +
Sbjct: 63  KSPRPSSYKV-------ILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVIT 115

Query: 221 DLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
           D + PACLPS +   ++     + GWG T           +L +  L V+ N+VC  +  
Sbjct: 116 DKVIPACLPSPNYVVADRTECFITGWGETQGTFGA----GLLMEAQLPVIENKVCNRYEF 171

Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
                  V+ +++CAGH  GG D+C                              Q DSG
Sbjct: 172 ---LNGRVQSTELCAGHLAGGTDSC------------------------------QGDSG 198

Query: 340 GPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           GPL+    +   + G+ S G+GCARP  PG+Y R++R++ WI   +
Sbjct: 199 GPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 247

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (113), Expect = 5e-07
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
            +L +  L V+ N+VC  +         V+ +++CAGH  GG D+C  DSGGPL+    +
Sbjct: 151 GLLMEAQLPVIENKVCNRYEF---LNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKD 207

Query: 64  STQVIGLVSTGIG 76
              + G+ S G+G
Sbjct: 208 KYILQGVTSWGLG 220

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 1e-38
 Identities = 75/272 (27%), Positives = 117/272 (43%), Gaps = 43/272 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG   +P   P++ S++  G H CGG +I  QW++TAAHC              V L 
Sbjct: 3   IIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKG---QSPTVVLG 59

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSS--FNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H LS+   S   +    F P    +S   +NDI L++L  + + +  ++   + S +  
Sbjct: 60  AHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSL 119

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            S     V GWG T+ +    R S+ L++V ++V+S ++C +     G      +  +CA
Sbjct: 120 RSGTKCKVTGWGATDPD--SLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFI-TKDMVCA 176

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G  +G KD+C                                D+GGPL+  G        
Sbjct: 177 GDAKGQKDSCK------------------------------GDAGGPLICKG----VFHA 202

Query: 355 LVSTGIGCARPRLPGLYTRLTR-YIGWISDTL 385
           +VS G  C     PG+YT LT+ Y  WI   L
Sbjct: 203 IVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           R S+ L++V ++V+S ++C +     G      +  +CAG  +G KD+C  D+GGPL+  
Sbjct: 139 RPSDTLREVTVTVLSRKLCNSQSYYNGDPFI-TKDMVCAGDAKGQKDSCKGDAGGPLICK 197

Query: 61  GAESTQVIGLVSTGIG 76
           G        +VS G  
Sbjct: 198 G----VFHAIVSGGHE 209

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

 Score =  135 bits (339), Expect = 3e-38
 Identities = 78/270 (28%), Positives = 117/270 (43%), Gaps = 47/270 (17%)

Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW   L       FCGGTI+ E +I+TAAHCL              T 
Sbjct: 1   IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTE 60

Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
           +E        +   V  ++ H   +  +++ DIA+L L   I +   + PA LP+ +   
Sbjct: 61  QEE----GGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPT-APPA 115

Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
           +     ++GWG T  +       + LQ +   V+S   C+A Y        +  +  C G
Sbjct: 116 TGTKCLISGWGNTASS--GADYPDELQCLDAPVLSQAKCEASYPG-----KITSNMFCVG 168

Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
             +GGKD+C                              Q DSGGP++  G    Q+ G+
Sbjct: 169 FLEGGKDSC------------------------------QGDSGGPVVCNG----QLQGV 194

Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G GCA+   PG+YT++  Y+ WI +T+
Sbjct: 195 VSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 224

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

 Score = 45.1 bits (105), Expect = 5e-06
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
              + LQ +   V+S   C+A Y        +  +  C G  +GGKD+C  DSGGP++  
Sbjct: 134 DYPDELQCLDAPVLSQAKCEASYPG-----KITSNMFCVGFLEGGKDSCQGDSGGPVVCN 188

Query: 61  GAESTQVIGLVSTGIG 76
           G    Q+ G+VS G G
Sbjct: 189 G----QLQGVVSWGDG 200

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 9e-38
 Identities = 77/272 (28%), Positives = 116/272 (42%), Gaps = 55/272 (20%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +V G   +    P+  +L   G   CGG +IH  W++TAAHC            + V L 
Sbjct: 1   LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKKP--------NLQVFLG 52

Query: 177 EHDLSRPS--ISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           +H+L +         V+R + HP +  +S + DI LL L R  + S+LI+P  L      
Sbjct: 53  KHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCS- 111

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +  S  + GWG T +        + +Q   + +VS + C+  Y        + ++ +CA
Sbjct: 112 ANTTSCHILGWGKTADGDF----PDTIQCAYIHLVSREECEHAYPG-----QITQNMLCA 162

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G E+ GKD+C                              Q DSGGPL+        + G
Sbjct: 163 GDEKYGKDSC------------------------------QGDSGGPLVCGD----HLRG 188

Query: 355 LVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           LVS G I C     PG+YT + RY  WI  T+
Sbjct: 189 LVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 3e-04
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
            + +Q   + +VS + C+  Y        + ++ +CAG E+ GKD+C  DSGGPL+    
Sbjct: 131 PDTIQCAYIHLVSREECEHAYPG-----QITQNMLCAGDEKYGKDSCQGDSGGPLVCGD- 184

Query: 63  ESTQVIGLVSTGI 75
               + GLVS G 
Sbjct: 185 ---HLRGLVSWGN 194

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score =  133 bits (334), Expect = 2e-37
 Identities = 68/275 (24%), Positives = 108/275 (39%), Gaps = 50/275 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        PW V++     + CGG +I   W++TAAHC  N    L         +
Sbjct: 1   IVGGYKCEKNSQPWQVAV--INEYLCGGVLIDPSWVITAAHCYSNNYQVLLGRNNLFKDE 58

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSC-----SSFNNDIALLELTRSIQWSDLIRPACLPSG 231
                R    +      +     +         +ND+ LL L+     +  ++   LP+ 
Sbjct: 59  PFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTK 118

Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                  +   +GWG TN +  +   S+ LQ V + ++SN+ C   Y+      NV +  
Sbjct: 119 E-PKVGSTCLASGWGSTNPS--EMVVSHDLQCVNIHLLSNEKCIETYKD-----NVTDVM 170

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG  +GGKD C                                DSGGPL+  G     
Sbjct: 171 LCAGEMEGGKDTC------------------------------AGDSGGPLICDG----V 196

Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           + G+ S G   CA+P+ P +Y +L ++  WI   +
Sbjct: 197 LQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVM 231

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 46.2 bits (108), Expect = 2e-06
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 9/73 (12%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
           + LQ V + ++SN+ C   Y+      NV +  +CAG  +GGKD C  DSGGPL+  G  
Sbjct: 143 HDLQCVNIHLLSNEKCIETYKD-----NVTDVMLCAGEMEGGKDTCAGDSGGPLICDG-- 195

Query: 64  STQVIGLVSTGIG 76
              + G+ S G  
Sbjct: 196 --VLQGITSGGAT 206

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 2e-37
 Identities = 73/275 (26%), Positives = 113/275 (41%), Gaps = 42/275 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG     GE PW V L  +G   CGGT+I+  W+V+AAHC     +      +   L 
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNW---RNLIAVLG 57

Query: 177 EHDLSRPSISTVPVL--RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
           EHDLS            +++   ++   + N+DIALL L + +  +D + P CLP  +  
Sbjct: 58  EHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFS 117

Query: 235 YSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
               +      V+GWG   +  +    +  L  + +  +  Q C    +  G   N+ E 
Sbjct: 118 ERTLAFVRFSLVSGWGQLLDRGAT---ALELMVLNVPRLMTQDCLQQSRKVGDSPNITEY 174

Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
             CAG+  G KD+C                                   GP       + 
Sbjct: 175 MFCAGYSDGSKDSCKGDSG------------------------------GPHATHYRGTW 204

Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            + G+VS G GCA     G+YTR+++YI W+   +
Sbjct: 205 YLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLM 239

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

 Score =  132 bits (332), Expect = 3e-37
 Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 45/265 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG +A+ G+FP+IVS+ R+GG +CGG++++   ++TAAHC+          +     +
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSR 60

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
                  S+S+V           S S  NND+A+L+L+ SI     I  A L +   D  
Sbjct: 61  TSGGITSSLSSV-------RVHPSYSGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPV 113

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
             S +    GW   +         L KV + +VS   C+A Y +      +     CAG 
Sbjct: 114 AGS-SATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTS----AITNQMFCAGV 168

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
             GGKD+C                                DSGGP++     S  +IG V
Sbjct: 169 SSGGKDSCQ------------------------------GDSGGPIVD---SSNTLIGAV 195

Query: 357 STGIGCARPRLPGLYTRLTRYIGWI 381
           S G GCARP   G+Y  +     +I
Sbjct: 196 SWGNGCARPNYSGVYASVGALRSFI 220

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

 Score = 45.1 bits (105), Expect = 4e-06
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
              L KV + +VS   C+A Y +      +     CAG   GGKD+C  DSGGP++    
Sbjct: 134 PVNLLKVTVPIVSRATCRAQYGTS----AITNQMFCAGVSSGGKDSCQGDSGGPIVD--- 186

Query: 63  ESTQVIGLVSTGIG 76
            S  +IG VS G G
Sbjct: 187 SSNTLIGAVSWGNG 200

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  132 bits (331), Expect = 5e-37
 Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 48/265 (18%)

Query: 127 EFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSIS 186
             PW V++ R   + CGG ++   W++TAAHC  +           +  +  D  R    
Sbjct: 2   SQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSK 61

Query: 187 TVP-----VLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVT 241
            +P     +  +  H       ++ND+ LL L++    +D+++P  LP+         + 
Sbjct: 62  AIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLA 121

Query: 242 VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGK 301
               GW +  P + +  + LQ V L ++ N+ C   ++       V ++ +CAG   GG 
Sbjct: 122 ---SGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEM-----KVTDAMLCAGEMDGGS 173

Query: 302 DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI- 360
             C                                DSGGPL+  G     + G+ S G  
Sbjct: 174 YTCE------------------------------HDSGGPLICDG----ILQGITSWGPE 199

Query: 361 GCARPRLPGLYTRLTRYIGWISDTL 385
            C  P  P +YT+L ++  WI +T+
Sbjct: 200 PCGEPTEPSVYTKLIKFSSWIRETM 224

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.2 bits (108), Expect = 2e-06
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           +  + LQ V L ++ N+ C   ++       V ++ +CAG   GG   C  DSGGPL+  
Sbjct: 133 KYPDDLQCVNLKLLPNEDCDKAHEM-----KVTDAMLCAGEMDGGSYTCEHDSGGPLICD 187

Query: 61  GAESTQVIGLVSTGIG 76
           G     + G+ S G  
Sbjct: 188 G----ILQGITSWGPE 199

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 251

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  131 bits (330), Expect = 1e-36
 Identities = 81/289 (28%), Positives = 111/289 (38%), Gaps = 48/289 (16%)

Query: 105 CG-RSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCL 159
           CG        + ++VGG  A P  +PW +SL         H CGGT+I    ++TAAHC+
Sbjct: 1   CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60

Query: 160 CNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQW 219
            N  +                       V V  I  H   +     NDIAL++L  +++ 
Sbjct: 61  SNTLTY---RVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVEL 117

Query: 220 SDLIRPACLPSGSLDYSEQS-VTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
            D I+ ACLPS      +     V GWG    N   G  +  LQ+    VV    C    
Sbjct: 118 GDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTN---GPIAAELQQGLQPVVDYATCSQRD 174

Query: 279 QSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
                   VKE+ +CAG + G   AC                                DS
Sbjct: 175 WWGT---TVKETMVCAGGD-GVISAC------------------------------NGDS 200

Query: 339 GGPLMLLGAESTQVIGLVSTGIG--CARPRLPGLYTRLTRYIGWISDTL 385
           GGPL         V G+VS G G  C   + P ++TR++ YI WI+  L
Sbjct: 201 GGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 251

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.0 bits (102), Expect = 1e-05
 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           +  LQ+    VV    C            VKE+ +CAG + G   AC  DSGGPL     
Sbjct: 154 AAELQQGLQPVVDYATCSQRDWWGT---TVKETMVCAGGD-GVISACNGDSGGPLNCQAD 209

Query: 63  ESTQVIGLVSTGIGSP 78
               V G+VS G G  
Sbjct: 210 GQWDVRGIVSFGSGLS 225

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 287

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 8e-36
 Identities = 47/314 (14%), Positives = 102/314 (32%), Gaps = 68/314 (21%)

Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLC 160
           CG     R+          +  + PW   +       G   C G ++ E +++TAAHC  
Sbjct: 1   CGMVWEHRK--------GTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFT 52

Query: 161 NGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSS---------FNNDIALL 211
                     I V++            + +  ++FHP+++ +          ++ D+AL+
Sbjct: 53  VDDKE---HSIKVSVGGEK------RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALI 103

Query: 212 ELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNEN----------PSQGRRSNIL 261
           +L   +++   IRP CLP          +         +                    L
Sbjct: 104 KLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKL 163

Query: 262 QKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVY 321
            +  + + +     +  +          +Q   G+++    +  V+ ++           
Sbjct: 164 TRKEVYIKNGDKKGSCERD---------AQYAPGYDKVKDISEVVTPRFLCTGGVSPYAD 214

Query: 322 PSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCA----------RPRLPGLY 371
           P+   G         DSGGPL++        +G++S G+                    +
Sbjct: 215 PNTCRG---------DSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFH 265

Query: 372 TRLTRYIGWISDTL 385
             L + + W+ + L
Sbjct: 266 INLFQVLPWLKEKL 279

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 287

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (104), Expect = 8e-06
 Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 12/89 (13%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKIN----------VKESQMCAGHEQG--GKDA 48
                L +  + + +     +  +                 V    +C G        + 
Sbjct: 158 EEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNT 217

Query: 49  CWADSGGPLMLLGAESTQVIGLVSTGIGS 77
           C  DSGGPL++        +G++S G+  
Sbjct: 218 CRGDSGGPLIVHKRSRFIQVGVISWGVVD 246

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (321), Expect = 1e-35
 Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 47/273 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG    P   P++V L       C G +I + W++TAAHC  N  S +     ++T +
Sbjct: 1   IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITRE 60

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
           E       +      +   +P +  ++   D+ LL+LT   + +  +    LP    D  
Sbjct: 61  EPTKQIMLVK-----KEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVK 115

Query: 237 E-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
                 VAGWG T+ + S    S+ L++V ++++  +VC          + +  + +CAG
Sbjct: 116 PGTMCQVAGWGRTHNSASW---SDTLREVEITIIDRKVCNDRNHYNFNPV-IGMNMVCAG 171

Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
             +GG+D+C                                DSG PL+  G       G+
Sbjct: 172 SLRGGRDSCN------------------------------GDSGSPLLCEG----VFRGV 197

Query: 356 VSTGI--GCARPRLPGLYTRLT-RYIGWISDTL 385
            S G+   C  PR PG+Y  L+ +++ WI  T+
Sbjct: 198 TSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (107), Expect = 3e-06
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 3   SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
           S+ L++V ++++  +VC          + +  + +CAG  +GG+D+C  DSG PL+  G 
Sbjct: 135 SDTLREVEITIIDRKVCNDRNHYNFNPV-IGMNMVCAGSLRGGRDSCNGDSGSPLLCEG- 192

Query: 63  ESTQVIGLVSTGIGSP 78
                 G+ S G+ + 
Sbjct: 193 ---VFRGVTSFGLENK 205

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 6e-35
 Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 47/277 (16%)

Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           ++ G     G+ PW V L        CG  +IH  W++TAAHC+           + +  
Sbjct: 1   LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKKL----LVRLGE 56

Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
            +          + +  +  HP++S S+ +NDIALL L +    S  I P CLP   L  
Sbjct: 57  YDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAE 116

Query: 236 -------SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
                   E  VT  G+  + E  ++  R+ +L  + + VV +  C     +      V 
Sbjct: 117 RELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSN-----MVS 171

Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
           E+ +CAG     +DAC                              + DSGGP++     
Sbjct: 172 ENMLCAGILGDRQDAC------------------------------EGDSGGPMVASFHG 201

Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +  ++GLVS G GC      G+YT+++RY+ WI   +
Sbjct: 202 TWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHI 238

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 3e-34
 Identities = 70/275 (25%), Positives = 107/275 (38%), Gaps = 41/275 (14%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPL-SASQINVTL 175
           I+GG  A  G FPW V    H     GG ++ ++WI+TAAH L        S + ++V L
Sbjct: 1   IIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58

Query: 176 KEHDLSRPS-ISTVPVLRIMFHPSHSCS---SFNNDIALLELTRSIQWSDLIRPACLPSG 231
              ++     +   P+ R+  HP +      +F  DIALLEL  S+     + P CLP  
Sbjct: 59  GHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDN 118

Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
              Y    +         E        + L+ V L V + Q C+ W + + +     ++ 
Sbjct: 119 DTFYDLGLMGYVSGFGVMEEKIA----HDLRFVRLPVANPQACENWLRGKNRMDVFSQNM 174

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
            CAGH    +DAC            R                              +   
Sbjct: 175 FCAGHPSLKQDACQ--GDSGGVFAVRDP--------------------------NTDRWV 206

Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
             G+VS GIGC+R    G YT++  Y+ WI   ++
Sbjct: 207 ATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEME 239

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 2e-04
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
           + L+ V L V + Q C+ W + + +     ++  CAGH    +DAC  DSGG   +    
Sbjct: 142 HDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPN 201

Query: 64  STQ--VIGLVSTGIG 76
           + +    G+VS GIG
Sbjct: 202 TDRWVATGIVSWGIG 216

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 233

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (310), Expect = 6e-34
 Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 41/271 (15%)

Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
           IVGG     GE PW   L       FCGGTI+ E +I+TAAHCL          ++ V  
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRF----KVRVGD 56

Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
           +  +      +   V  ++ H   +  +++ DIA+L L   I +   + PACLP      
Sbjct: 57  RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAE 116

Query: 236 SEQSVTVAGWGWTNENPSQ-GRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
           S       G         + GR+S  L+ + +  V    C+           + ++  CA
Sbjct: 117 STLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF-----IITQNMFCA 171

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
           G++   +DAC                              Q DSGGP +    ++  V G
Sbjct: 172 GYDTKQEDAC------------------------------QGDSGGPHVTRFKDTYFVTG 201

Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +VS G GCAR    G+YT++T ++ WI  ++
Sbjct: 202 IVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  123 bits (309), Expect = 8e-34
 Identities = 57/275 (20%), Positives = 98/275 (35%), Gaps = 48/275 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG        PW V++   G   CGG ++H QW++TAAHC+ +              +
Sbjct: 1   IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSDDYQIWLGRHNLSKDE 60

Query: 177 EHDLSRPSISTVP-----VLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
           +         +       +  +           ++D+ LL L +  + +D ++   LP+ 
Sbjct: 61  DTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPT- 119

Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                  +   +GWG  +   ++G     LQ V L + SN+ C   Y        + E  
Sbjct: 120 QEPKLGSTCYTSGWGLISTFTNRGS--GTLQCVELRLQSNEKCARAYP-----EKMTEFV 172

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CA H       C                                DSGG L+  G     
Sbjct: 173 LCATHRDDSGSIC------------------------------LGDSGGALICDG----V 198

Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
             G+ S G   CA      ++T++  +  WI +T+
Sbjct: 199 FQGITSWGYSECADFNDNFVFTKVMPHKKWIKETI 233

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  120 bits (302), Expect = 6e-33
 Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 49/269 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG        P+ VSL   G HFCGG++I+ QW+V+AAHC  +G       Q+ +   
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGI------QVRLGED 53

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             ++   +   +   + + HPS++ ++ NNDI L++L  +   +  +        S   +
Sbjct: 54  NINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASIS-LPTSCASA 112

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
                ++GWG T  +       ++L+ +   ++S+  C++ Y        +  +  CA  
Sbjct: 113 GTQCLISGWGNTKSS--GTSYPDVLKCLKAPILSDSSCKSAYPG-----QITSNMFCAYG 165

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +G  D+C                              Q DSGGP++  G    ++ G+V
Sbjct: 166 LEGKGDSC------------------------------QGDSGGPVVCSG----KLQGIV 191

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G GC     PG+YT++  Y+ WI  T+
Sbjct: 192 SWGSGCQAKNKPGVYTKVCNYVSWIKQTI 220

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (300), Expect = 1e-32
 Identities = 71/271 (26%), Positives = 109/271 (40%), Gaps = 46/271 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I+GG  A     P++ S++ +G H CGG ++ EQW+++AAHCL +        Q+ +   
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADG--KVQVLLGAH 58

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP-SGSLDY 235
                 PS     VLR + HP     + ++D+ LL+L+        +RP           
Sbjct: 59  SLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVA 118

Query: 236 SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
                 VAGWG  N     GRR + LQ V L V+    C           +   ++    
Sbjct: 119 PGTLCDVAGWGIVNH---AGRRPDSLQHVLLPVLDRATCNRRTH-----HDGAITERLMC 170

Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
            E   +D+C                              + DSGGPL+  G     + G+
Sbjct: 171 AESNRRDSC------------------------------KGDSGGPLVCGG----VLEGV 196

Query: 356 VSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
           V++G   C   + PG+YTR+  Y  WI   L
Sbjct: 197 VTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

 Score =  119 bits (298), Expect = 3e-32
 Identities = 59/270 (21%), Positives = 95/270 (35%), Gaps = 47/270 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG   +  E  ++V+     G FCGGT+I+ +W+VTAAHC                L 
Sbjct: 1   VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHCDSTDFQMQLGVHSKKVLN 60

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
           E +      +  P  + +    ++    + DI L++L + I  S  I P  LPS      
Sbjct: 61  EDE-----QTRNPKEKFICPNKNNNEVLDKDIMLIKLDKPISNSKHIAPLSLPS---SPP 112

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
                    GW +  P +    ++     ++++ + VC                      
Sbjct: 113 SVGSVCRIMGWGSITPVKETFPDVPYCANINLLDHAVC---------------------- 150

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
                       Q   P +                     DSGGPL+  G    Q  G+V
Sbjct: 151 ------------QAGYPELLAEYRTLCAGIVQGGKDTCGGDSGGPLICNG----QFQGIV 194

Query: 357 STGI-GCARPRLPGLYTRLTRYIGWISDTL 385
           S G   C +   PG+YT +  Y  WI   +
Sbjct: 195 SYGAHPCGQGPKPGIYTNVFDYTDWIQRNI 224

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 242

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (292), Expect = 2e-31
 Identities = 69/271 (25%), Positives = 110/271 (40%), Gaps = 34/271 (12%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           I GG  A PG+FPW V +   GG    G ++++ W++TAAH +       SA  I +   
Sbjct: 1   IYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMG-T 57

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
              LS            +       + F+NDIAL++L   +  +  I P CLP    +  
Sbjct: 58  LKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESF 117

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY-QSEGKKINVKESQMCAG 295
            ++  + G         +G  +  L  V + +V +Q C A Y +    + +V  + +CAG
Sbjct: 118 MRTDDI-GTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAG 176

Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
            E GGKD+C           + G +         W                     V G+
Sbjct: 177 LESGGKDSCR--------GDSGGALVFLDSETERW--------------------FVGGI 208

Query: 356 VSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           VS G + C      G+YT++  YI WI + +
Sbjct: 209 VSWGSMNCGEAGQYGVYTKVINYIPWIENII 239

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 3e-31
 Identities = 55/269 (20%), Positives = 93/269 (34%), Gaps = 43/269 (15%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +V G+        W+VSL+    H CGG++I E W++TA  C  +             L 
Sbjct: 1   VVNGIPTR-TNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSR----DLKDYEAWLG 55

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
            HD            +++           +D+ L++L R     D +    LP+      
Sbjct: 56  IHD--VHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIP 113

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           E++             +      +     +        +   Q    K+ + ES++CAG 
Sbjct: 114 EKTSCSVYGWGYTGLINYDGLLRVAHLYIMG------NEKCSQHHRGKVTLNESEICAGA 167

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
           E+ G   C                                D GGPL+    +   V+G++
Sbjct: 168 EKIGSGPCE------------------------------GDYGGPLVCEQHKMRMVLGVI 197

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
             G GCA P  PG++ R+  Y  WI   +
Sbjct: 198 VPGRGCAIPNRPGIFVRVAYYAKWIHKII 226

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (87), Expect = 9e-04
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 19  CQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG 76
            +   Q    K+ + ES++CAG E+ G   C  D GGPL+    +   V+G++  G G
Sbjct: 145 NEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRG 202

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

 Score =  115 bits (287), Expect = 8e-31
 Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 49/269 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A  G++P+ VSL+  G H CG +I+    ++TAAHC+    +         T  
Sbjct: 1   IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNY 60

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
                  S     V   + + ++      ND+AL+ LT  I+++DL++P  L +   D  
Sbjct: 61  LS----ESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLE 116

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
               T+ GWG T      G   N LQ++ L V   + C+                     
Sbjct: 117 SNPCTLTGWGSTRLG---GNTPNALQEIELIVHPQKQCERDQWR-------VIDSHICTL 166

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            + G+ AC                                DSGGPL+  G      IG+V
Sbjct: 167 TKRGEGACHG------------------------------DSGGPLVANG----AQIGIV 192

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S G  CA    P +YTR++ ++ WI+  L
Sbjct: 193 SFGSPCALGE-PDVYTRVSSFVSWINANL 220

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  115 bits (288), Expect = 1e-30
 Identities = 69/276 (25%), Positives = 113/276 (40%), Gaps = 46/276 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A    +P  +SL+   G    H CGGT+I + W++TAAHC+    +      + 
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTF--RVVVG 58

Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACL-PSG 231
                 +        V  + +  + +    +   DIALL L +S+  +  ++   L  +G
Sbjct: 59  EHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAG 118

Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
           ++  +     + GWG T  N      +  LQ+  L  V   +C +          VK S 
Sbjct: 119 TILANNSPCYITGWGLTRTNGQL---AQTLQQAYLPTVDYAICSSSSYWGS---TVKNSM 172

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG + G +  C                              Q DSGGPL  L      
Sbjct: 173 VCAGGD-GVRSGC------------------------------QGDSGGPLHCLVNGQYA 201

Query: 352 VIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
           V G+ S  + +GC   R P ++TR++ YI WI++ +
Sbjct: 202 VHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]} Length = 226

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

 Score =  114 bits (286), Expect = 2e-30
 Identities = 68/274 (24%), Positives = 107/274 (39%), Gaps = 53/274 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG+ A P  +P   +L     +FCGG++I  +WI+TAAHC+           ++V L 
Sbjct: 1   IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDGAG------FVDVVLG 54

Query: 177 EHDLSRPSISTVPVLRIMFH--PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
            H++     + V +    F    +++    +NDIA++ L   +  +  I    LPS    
Sbjct: 55  AHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTD-V 113

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
                VT  GWG  +++      S++L++V + ++SN  C A Y        +       
Sbjct: 114 GVGTVVTPTGWGLPSDSALG--ISDVLRQVDVPIMSNADCDAVY-------GIVTDGNIC 164

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
               GGK  C                                DSGGPL   G       G
Sbjct: 165 IDSTGGKGTC------------------------------NGDSGGPLNYNG----LTYG 190

Query: 355 LVSTGIGCA-RPRLPGLYTRLTRYIGWISDTLDI 387
           + S G         P  +TR+T ++ WI     I
Sbjct: 191 ITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQTGI 224

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]} Length = 226

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 11/73 (15%)

Query: 4   NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAE 63
           ++L++V + ++SN  C A Y        +           GGK  C  DSGGPL   G  
Sbjct: 136 DVLRQVDVPIMSNADCDAVY-------GIVTDGNICIDSTGGKGTCNGDSGGPLNYNG-- 186

Query: 64  STQVIGLVSTGIG 76
                G+ S G  
Sbjct: 187 --LTYGITSFGAA 197

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  112 bits (280), Expect = 1e-29
 Identities = 74/277 (26%), Positives = 110/277 (39%), Gaps = 47/277 (16%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A P  +PW VSL+        H CGGT++ + W++TAAHC+ +  +       +
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRH 60

Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
                   S     +  V+   ++ +       NDIALL+L   +  +D I+  CLP+  
Sbjct: 61  SLSTNEPGSLAVKVSKLVVHQDWNSNQLS--NGNDIALLKLASPVSLTDKIQLGCLPAAG 118

Query: 233 LDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                  V  V GWG    N       +ILQ+  L VV    C           +  ++ 
Sbjct: 119 TILPNNYVCYVTGWGRLQTNG---ASPDILQQGQLLVVDYATCSKPGW----WGSTVKTN 171

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST- 350
           M      G   +C                                DSGGPL   GA    
Sbjct: 172 MICAGGDGIISSC------------------------------NGDSGGPLNCQGANGQW 201

Query: 351 QVIGLVSTG--IGCARPRLPGLYTRLTRYIGWISDTL 385
           QV G+VS G  +GC     P ++TR++ YI WI+  +
Sbjct: 202 QVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

 Score =  111 bits (277), Expect = 2e-29
 Identities = 61/277 (22%), Positives = 108/277 (38%), Gaps = 60/277 (21%)

Query: 117 IVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG+ + P   P++  L    ++     CGG +I  Q+++TAAHC     +        
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGREIT-------- 52

Query: 173 VTLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLP- 229
           V L  HD+ +   +     V + + H S++     +DI LL+L + ++ +  +    LP 
Sbjct: 53  VILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPS 112

Query: 230 SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
                +       AGWG T     +   S  L++V L ++  + C  +            
Sbjct: 113 PSDFIHPGAMCWAAGWGKTGV---RDPTSYTLREVELRIMDEKACVDYR----------- 158

Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
                 + +     C  S                             DSGGPL+  G   
Sbjct: 159 ------YYEYKFQVCVGSPTTLRAAF-------------------MGDSGGPLLCAG--- 190

Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
               G+VS G   A+P  P ++TR++ Y+ WI+  ++
Sbjct: 191 -VAHGIVSYGHPDAKP--PAIFTRVSTYVPWINAVIN 224

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  110 bits (276), Expect = 4e-29
 Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 54/274 (19%)

Query: 117 IVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+GG  A P   P++  L    +  G   CGG +I E +++TAAHC  +       +   
Sbjct: 1   IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSGSKIQVTLGAH-- 58

Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
                          +PV++I+ HP+++  + +NDI LL+L    + S  ++P  LP  +
Sbjct: 59  ----NIKEQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRN 114

Query: 233 LDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
           +         VAGWG           S+ LQ+V L+V  +Q C+++ ++       K ++
Sbjct: 115 VKVKPGDVCYVAGWGKLGPMGKY---SDTLQEVELTVQEDQKCESYLKN----YFDKANE 167

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +CAG  +  + +                                 DSGGPL+        
Sbjct: 168 ICAGDPKIKRASFR------------------------------GDSGGPLVCKK----V 193

Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             G+VS G        P  +T+++ ++ WI  T+
Sbjct: 194 AAGIVSYGQNDGS--TPRAFTKVSTFLSWIKKTM 225

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 1   RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
           + S+ LQ+V L+V  +Q C+++ ++       K +++CAG  +  + +   DSGGPL+  
Sbjct: 136 KYSDTLQEVELTVQEDQKCESYLKN----YFDKANEICAGDPKIKRASFRGDSGGPLVCK 191

Query: 61  GAESTQVIGLVSTGIGSPTS 80
                   G+VS G    ++
Sbjct: 192 K----VAAGIVSYGQNDGST 207

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 1e-28
 Identities = 58/272 (21%), Positives = 103/272 (37%), Gaps = 51/272 (18%)

Query: 117 IVGGLAANPGEFPWIVSL---KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  A P   P++  L    +     CGG +I + +++TAAHC  +         + +
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVLTAAHCWGSSI------NVTL 54

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
                    P+   +PV R + HP+++  +F+NDI LL+L R  + +  ++P  LPS   
Sbjct: 55  GAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKA 114

Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
                                G+ S+ LQ+V ++V  ++ C++                 
Sbjct: 115 QVKPGQTCSVAGWGQTAP--LGKHSHTLQEVKMTVQEDRKCESDL--------------- 157

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
                               H     +              + DSGGPL+     +    
Sbjct: 158 -------------------RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVC----NKVAQ 194

Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
           G+VS G     P  P   T+++ ++ WI  T+
Sbjct: 195 GIVSYGRNNGMP--PRACTKVSSFVHWIKKTM 224

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]} Length = 236

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

 Score =  106 bits (264), Expect = 2e-27
 Identities = 60/276 (21%), Positives = 99/276 (35%), Gaps = 47/276 (17%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           +VGG  A P  +PW +SL+   G    H CGG++I + W++TAAHC+ +  +      + 
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSARTW--RVVLG 58

Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
                 +  +  I TV  + I    +    +   DIALL L      +  ++ A LP  +
Sbjct: 59  EHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSN 118

Query: 233 LDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
                     + GWG T+        S+ L++  L  V +  C +               
Sbjct: 119 QILPNNNPCYITGWGKTSTGG---PLSDSLKQAWLPSVDHATCSSSGWWGSTVK-----T 170

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
                  G    C                                   GPL      S  
Sbjct: 171 TMVCAGGGANSGCNGDSG------------------------------GPLNCQVNGSYY 200

Query: 352 VIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
           V G+ S  +  GC   + P ++TR++ YI W++  +
Sbjct: 201 VHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM 236

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

 Score =  105 bits (262), Expect = 3e-27
 Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 49/268 (18%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           +VGG  A  GEFP++V L       CGG +  +  ++TAAHC+    +    + I  T  
Sbjct: 1   VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSGSGNN---TSITATGG 53

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
             DL   S   V   +++  P ++ +  +  +             + +P    + +  Y+
Sbjct: 54  VVDLQSSSAVKVRSTKVLQAPGYNGTGKDWAL-------IKLAQPINQPTLKIATTTAYN 106

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           + + TVAGWG   E  SQ R      K  +  VS+  C++ Y   G ++   E       
Sbjct: 107 QGTFTVAGWGANREGGSQQRYL---LKANVPFVSDAACRSAY---GNELVANEEICAGYP 160

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
           + GG D C                            P+         +        +G+V
Sbjct: 161 DTGGVDTCQG----------------------DSGGPMFRKDNADEWIQ-------VGIV 191

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDT 384
           S G GCARP  PG+YT ++ +   I+  
Sbjct: 192 SWGYGCARPGYPGVYTEVSTFASAIASA 219

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  105 bits (262), Expect = 4e-27
 Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 58/272 (21%)

Query: 128 FPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRP 183
           + W VSL+        H CGG++I   W+VTA HC+        +    V L E+D S  
Sbjct: 2   WSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST------SRTYQVVLGEYDRSVL 55

Query: 184 S----ISTVPVLRIMFHPSHSCSSFNND--IALLELTRSIQWSDLIRPACLP-SGSLDYS 236
                +  +    +  HP  + +       IAL++L+RS Q  D ++ A LP +G +  +
Sbjct: 56  EGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPN 115

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
           E    ++GWG        G   + LQ+  L  V  + C  W       I VK++ +CAG 
Sbjct: 116 EAPCYISGWGRLYTG---GPLPDKLQQALLPTVDYEHCSQWDW---WGITVKKTMVCAGG 169

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST-QVIGL 355
                                                   DSGGPL    A+ + QV G+
Sbjct: 170 --------------------------------DTRSGCNGDSGGPLNCPAADGSWQVHGV 197

Query: 356 VS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
            S  +  GC   + P ++TR++ +I WI +T+
Sbjct: 198 TSFVSAFGCNTIKKPTVFTRVSAFIDWIDETI 229

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  104 bits (258), Expect = 1e-26
 Identities = 66/273 (24%), Positives = 104/273 (38%), Gaps = 54/273 (19%)

Query: 117 IVGGLAANPGEFPWIVSL---KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  A P   P++  L        H CGG ++ E +++TAAHCL +  +    +    
Sbjct: 1   IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGSSINVTLGAHN-- 58

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPAC-LPSGS 232
                     +   +PV R + HP ++  +  NDI LL+LTR    +D + P     S +
Sbjct: 59  ----IMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLA 114

Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
                   +VAGWG    N      ++ LQ+V L V S + C A +++      +     
Sbjct: 115 EVKPGMMCSVAGWGRLGVNM---PSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDP 171

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
                                                       DSGGPL+  G      
Sbjct: 172 S-----------------------------------KRKNSFSGDSGGPLVCNG----VA 192

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+VS G        P +YTR++ ++ WI  T+
Sbjct: 193 QGIVSYGRNDG--TTPDVYTRISSFLSWIHSTM 223

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

 Score =  104 bits (258), Expect = 2e-26
 Identities = 56/273 (20%), Positives = 99/273 (36%), Gaps = 40/273 (14%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           ++GG  A+PGEFPW +S +R  G   H CG +++     ++A+HC+             +
Sbjct: 1   VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGL 60

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
             +       + +         + + + S  N+   L   T      ++       + + 
Sbjct: 61  WQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNN 120

Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
           DY+  +  ++GWG T+   +     +ILQK ++ V++   C A     G           
Sbjct: 121 DYAGTTCVISGWGRTDGTNNL---PDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICV 177

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ-- 351
                                                      DSGGPL      +    
Sbjct: 178 QDPAGNT-------------------------------GACNGDSGGPLNCPDGGTRVVG 206

Query: 352 -VIGLVSTGIGCARPRLPGLYTRLTRYIGWISD 383
               +VS+G+G   P  P +YTR++ Y+GWI D
Sbjct: 207 VTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (258), Expect = 2e-26
 Identities = 68/293 (23%), Positives = 105/293 (35%), Gaps = 50/293 (17%)

Query: 105 CG-RSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGP 163
           CG          +I+GG  A+   FPW V        + GG +I+E W++TAAH +    
Sbjct: 1   CGVPREPFEEKQRIIGGSDADIKNFPWQVFF---DNPWAGGALINEYWVLTAAHVVEGNR 57

Query: 164 SPL----SASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQW 219
            P     S S     L +  +  P    +     +       ++F+NDIAL+ L   ++ 
Sbjct: 58  EPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKM 117

Query: 220 SDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
              + P CLP  S DY+     +           + R   + +   L V   + C+    
Sbjct: 118 GPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRL-KAARLPVAPLRKCKEVKV 176

Query: 280 S----EGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ 335
                + +      + +CAG E  G D+C                              +
Sbjct: 177 EKPTADAEAYVFTPNMICAGGE-KGMDSC------------------------------K 205

Query: 336 ADSGGPLMLLGAEST---QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            DSGG   +            GLVS G  C      GLYTR+  Y+ WI  T+
Sbjct: 206 GDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT---YGLYTRVKNYVDWIMKTM 255

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]} Length = 218

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (248), Expect = 3e-25
 Identities = 58/272 (21%), Positives = 94/272 (34%), Gaps = 58/272 (21%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P  +P++VSL+  GGHFCG T+I   ++++AAHC+ N         + V L 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVR----AVRVVLG 56

Query: 177 EHDLSRPSISTV-PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPAC-LPSGSLD 234
            H+LSR   +     ++ +F   +   +  NDI +L+L  S   +  ++ A     G   
Sbjct: 57  AHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRL 116

Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
            +       GWG                                 S  +++NV       
Sbjct: 117 GNGVQCLAMGWGLLG------------------------RNRGIASVLQELNVTVVTSLC 152

Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
                                                     DSG PL+  G     + G
Sbjct: 153 RRS-----------------------NVCTLVRGRQAGVCFGDSGSPLVCNG----LIHG 185

Query: 355 LVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
           + S    GCA    P  +  + +++ WI   +
Sbjct: 186 IASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.5 bits (241), Expect = 3e-24
 Identities = 56/270 (20%), Positives = 90/270 (33%), Gaps = 52/270 (19%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           IVGG  A P +FP++ S++  G HFCGG +IH ++++TAA C  +       S + +   
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPG--VSTVVLGAY 58

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
           +             +  M    +      ND+ LL+L R    +  +    LP  +    
Sbjct: 59  DLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVE 118

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
             +             S GR S   + V ++V     C+                +C G 
Sbjct: 119 AGTRCQ--VAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNN-------------VCTGV 163

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
                  C                                D G PL+  G       G+ 
Sbjct: 164 LTRRGGICN------------------------------GDGGTPLVCEG----LAHGVA 189

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTLD 386
           S  +G    R P  +TR+  +  WI   L+
Sbjct: 190 SFSLGPC-GRGPDFFTRVALFRDWIDGVLN 218

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (240), Expect = 3e-24
 Identities = 59/273 (21%), Positives = 99/273 (36%), Gaps = 55/273 (20%)

Query: 117 IVGGLAANPGEFPWIVSL---KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           I+GG  + P   P++  L      G   CGG ++ E +++TAAHC  +         + +
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGSNI------NVTL 54

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
                     +   +   R + HP ++  +  NDI LL+L+R ++ +  + P  LP    
Sbjct: 55  GAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQE 114

Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
                   TVAGWG  +            ++V L V  ++ C   + S            
Sbjct: 115 GLRPGTLCTVAGWGRVSMRRGTDTL----REVQLRVQRDRQCLRIFGS------------ 158

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
                          RQ                         + DSGGPL+         
Sbjct: 159 -----------YDPRRQICVGDRR------------ERKAAFKGDSGGPLLCNN----VA 191

Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
            G+VS G     P  P ++TR++ ++ WI  T+
Sbjct: 192 HGIVSYGKSSGVP--PEVFTRVSSFLPWIRTTM 222

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.8 bits (239), Expect = 5e-24
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 60/274 (21%)

Query: 119 GGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
           GG    P   P++  L          FCGG +I   +++TAAHC            I VT
Sbjct: 1   GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGR--------SITVT 52

Query: 175 LKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS-G 231
           L  H+++    +   + V++   HP ++ S+ ++DI LL+L      +  +     PS  
Sbjct: 53  LGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQF 112

Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
           +     +   VAGWG T         S+ LQ+V L ++  Q C  +             Q
Sbjct: 113 NFVPPGRMCRVAGWGRTGVL---KPGSDTLQEVKLRLMDPQACSHFRD------FDHNLQ 163

Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
           +C G+ +                                    + DSGGPL+  G     
Sbjct: 164 LCVGNPR------------------------------KTKSAFKGDSGGPLLCAG----V 189

Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
             G+VS G   A+P  P ++TR++ Y  WI+  L
Sbjct: 190 AQGIVSYGRSDAKP--PAVFTRISHYRPWINQIL 221

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (234), Expect = 2e-23
 Identities = 59/273 (21%), Positives = 91/273 (33%), Gaps = 57/273 (20%)

Query: 117 IVGGLAANPGEFPWIVSL---KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
           IVGG  A P   P++ SL      G HFCGGT+IH  +++TAAHCL + P  L    +  
Sbjct: 1   IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLG- 59

Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
               +  ++        +  +F  ++   +  NDI L++L+     S  +    LP    
Sbjct: 60  --AHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQ 117

Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
                +  +A                                            +   +C
Sbjct: 118 PVPHGTQCLAMGWGRVGAHDP----------------PAQVLQELNVTVVTFFCRPHNIC 161

Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
               +     C+                               DSGGPL+  G     + 
Sbjct: 162 TFVPRRKAGICF------------------------------GDSGGPLICDG----IIQ 187

Query: 354 GLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
           G+ S  I GCA    P  +TR+  Y+ WI  TL
Sbjct: 188 GIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]} Length = 230

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

 Score = 87.9 bits (216), Expect = 1e-20
 Identities = 56/276 (20%), Positives = 94/276 (34%), Gaps = 53/276 (19%)

Query: 117 IVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
           I+ G  A  G FP+   L    +     +CGG++I  +WI+TAAHC+ +       +   
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD-------AVSV 53

Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
           V      +     + V   RI+ H   +  ++ ND+AL+++       ++          
Sbjct: 54  VVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIPHVEYTDNIQPIRLPSGEE 113

Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
           L+   +++     GW   N      + ILQ     V+ N  C   Y        + ES +
Sbjct: 114 LNNKFENIWATVSGWGQSNT----DTVILQYTYNLVIDNDRCAQEYPP----GIIVESTI 165

Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
           C     G             P V   +                                +
Sbjct: 166 CGDTSDGKSPCFG---DSGGPFVLSDKNL------------------------------L 192

Query: 353 IGLVSTGIGCA-RPRLPGLYTRLTRYIGWISDTLDI 387
           IG+VS   G       P  ++R+T Y+ WI     I
Sbjct: 193 IGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNTGI 228

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]} Length = 215

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

 Score = 82.5 bits (202), Expect = 5e-19
 Identities = 31/261 (11%), Positives = 70/261 (26%), Gaps = 62/261 (23%)

Query: 123 ANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS 181
           AN    P+        GG  C GT+I    I+T  HC+ N  S   +++ +V    +D +
Sbjct: 12  ANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDST 71

Query: 182 RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVT 241
             + S       +     +  +   D A+++   +I  +   R         + +  ++ 
Sbjct: 72  AVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSIR---QVTNLTGTTIK 128

Query: 242 VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGK 301
           ++G+                                                    +   
Sbjct: 129 ISGYPGD-----------------------------------------------KMRSTG 141

Query: 302 DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG 361
                              Y       +       +SG  ++    ++ Q++G+ + G  
Sbjct: 142 KVSQWEMSGSVTREDTNLAY-------YTIDTFSGNSGSAML---DQNQQIVGVHNAGYS 191

Query: 362 CAR-PRLPGLYTRLTRYIGWI 381
                  P        +I + 
Sbjct: 192 NGTINGGPKATAAFVEFINYA 212

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]} Length = 263

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

 Score = 77.7 bits (190), Expect = 5e-17
 Identities = 31/268 (11%), Positives = 67/268 (25%), Gaps = 52/268 (19%)

Query: 125 PGEFPWIVSLKRHGGHFCGGTIIH------EQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
                 + +  + G   C G++++      + + +TA HC     S  ++  +    +  
Sbjct: 19  RDIIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNS 78

Query: 179 DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQ 238
               P+           +   S S   +   +     +  ++ L                
Sbjct: 79  TCRAPNTPASGA-----NGDGSMSQTQSGSTVKATYATSDFTLLELNNAAN------PAF 127

Query: 239 SVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQ 298
           ++  AGW   ++N      +     VA   +SN      + + G       + +    + 
Sbjct: 128 NLFWAGWDRRDQNYPGA-IAIHHPNVAEKRISNSTSPTSFVAWGGGAGT--THLNVQWQP 184

Query: 299 GGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST-QVIGLVS 357
            G                                     SG P+         Q+ G  S
Sbjct: 185 SGGVTE------------------------------PGSSGSPIYSPEKRVLGQLHGGPS 214

Query: 358 TGIGCARPRLPGLYTRLTRYIGWISDTL 385
           +       R    Y R+           
Sbjct: 215 SCSATGTNR-SDQYGRVFTSWTGGGAAA 241

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]} Length = 242

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

 Score = 48.9 bits (115), Expect = 3e-07
 Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 7/141 (4%)

Query: 123 ANPGEFPW--IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL 180
            +  ++P+  I ++   G     G +I +  ++T  H         S      ++   D 
Sbjct: 36  KDRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDD- 94

Query: 181 SRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS---IQWSDLIRPACLPSGSLDYSE 237
              +  T      +            D+AL+ L      +   D I PA + + +     
Sbjct: 95  -NGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDG 153

Query: 238 QSVTVAGWGWTNENPSQGRRS 258
             + + G+ + ++     R  
Sbjct: 154 DKLELIGYPFDHKVNQMHRSE 174

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]} Length = 216

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

 Score = 46.9 bits (110), Expect = 1e-06
 Identities = 14/162 (8%), Positives = 39/162 (24%), Gaps = 17/162 (10%)

Query: 123 ANPGEFPW-----IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKE 177
            +     +     I      G     G ++ +  ++T  H +               LK 
Sbjct: 12  TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDA------THGDPHALKA 65

Query: 178 HDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSE 237
              +    +             +  S   D+A+++ +     ++  +           S 
Sbjct: 66  FPSAINQDNYPN--GGFTAEQITKYSGEGDLAIVKFSP----NEQNKHIGEVVKPATMSN 119

Query: 238 QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
            + T      T       +    + +    +   +     Y 
Sbjct: 120 NAETQTNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQYD 161

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]} Length = 187

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

 Score = 45.0 bits (105), Expect = 3e-06
 Identities = 31/269 (11%), Positives = 59/269 (21%), Gaps = 83/269 (30%)

Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
           ++GG A   G      S      +   G     ++ VTA HC                  
Sbjct: 1   VLGGGAIYGG--GSRCSA---AFNVTKGG---ARYFVTAGHCTNIS-------------- 38

Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
                  +  +      +       S   ND  ++  T     +  +             
Sbjct: 39  -------ANWSASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYN--------- 82

Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
               T       N    Q         +  S  + +V      +    +N          
Sbjct: 83  --GSTQDISSAANAVVGQA--------IKKSGSTTKVTSGTVTAVNVTVNY-GDGPVYNM 131

Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
            +    +                                 DSGG         +  +G+ 
Sbjct: 132 VRTTACSAG------------------------------GDSGGAHF----AGSVALGIH 157

Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
           S   GC+      ++  +T  +     T+
Sbjct: 158 SGSSGCSGTAGSAIHQPVTEALSAYGVTV 186

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]} Length = 187

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 5/72 (6%)

Query: 9   VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVI 68
           +  S  + +V      +    +N           +    +   DSGG         +  +
Sbjct: 100 IKKSGSTTKVTSGTVTAVNVTVNY-GDGPVYNMVRTTACSAGGDSGGAHF----AGSVAL 154

Query: 69  GLVSTGIGSPTS 80
           G+ S   G   +
Sbjct: 155 GIHSGSSGCSGT 166

>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]} Length = 246

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Exfoliative toxin B
species: Staphylococcus aureus [TaxId: 1280]

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 16/152 (10%)

Query: 123 ANPGEFPW--IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL 180
            +    P+  + ++   G     G +I +  IVT  H           +  N+       
Sbjct: 29  TDNARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAREAAK----NPSNIIFTPAQN 84

Query: 181 SRPSISTVPVLRIMFHPSH---SCSSFNNDIALLELTRSIQWS---DLIRPACLPSGSLD 234
                +  P     F       S      D+A+++L  + +     DLI+PA +P     
Sbjct: 85  RDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDI 144

Query: 235 YSEQSVTVAGW----GWTNENPSQGRRSNILQ 262
                 ++ G+       +   SQ    N  Q
Sbjct: 145 AKGDKYSLLGYPYNYSAYSLYQSQIEMFNDSQ 176

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	388
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	100.0
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	100.0
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	100.0
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	100.0
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	100.0
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	100.0
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	100.0
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	100.0
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	100.0
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	100.0
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	100.0
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	100.0
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	100.0
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	100.0
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	100.0
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	100.0
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	100.0
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	100.0
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	100.0
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	100.0
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	100.0
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	100.0
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	100.0
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	100.0
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	100.0
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	100.0
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	100.0
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	100.0
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	100.0
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	100.0
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	100.0
d1elva1	259	Complement C1S protease, catalytic domain {Human (	100.0
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	100.0
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	100.0
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	100.0
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	100.0
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	100.0
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	100.0
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	100.0
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	100.0
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	100.0
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	100.0
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	100.0
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	100.0
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	100.0
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	100.0
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	100.0
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	99.92
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	99.91
d1agja_	242	Epidermolytic (exfoliative) toxin A {Staphylococcu	99.71
d2o8la1	216	V8 protease {Staphylococcus aureus [TaxId: 1280]}	99.68
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	99.6
d1qtfa_	246	Exfoliative toxin B {Staphylococcus aureus [TaxId:	99.39
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	99.31
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	99.27
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	99.25
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	99.25
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.25
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	99.24
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	99.23
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	99.22
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	99.2
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	99.17
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	99.15
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	99.15
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	99.15
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	99.14
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	99.13
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	99.12
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	99.11
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	99.11
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	99.11
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	99.1
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	99.1
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	99.09
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.08
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	99.08
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	99.08
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	99.07
d2sgaa_	181	Protease A {Streptomyces griseus, strain k1 [TaxId	99.07
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	99.07
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.06
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.04
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	99.04
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	99.02
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	98.99
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	98.97
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	98.96
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	98.95
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	98.95
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	98.95
d2qaaa1	185	Protease B {Streptomyces griseus, strain k1 [TaxId	98.92
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	98.91
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	98.91
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	98.89
d1elva1	259	Complement C1S protease, catalytic domain {Human (	98.88
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	98.88
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	98.84
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	98.82
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	98.8
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	98.78
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	98.76
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	98.76
d1l1ja_	228	Protease Do (DegP, HtrA), catalytic domain {Thermo	98.71
d2h5ca1	198	alpha-Lytic protease {Lysobacter enzymogenes, 495	98.71
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	98.71
d1lcya2	205	Mitochondrial serine protease HtrA2, catalytic dom	98.68
d2z9ia2	221	Protease PepD {Mycobacterium tuberculosis [TaxId:	98.68
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	98.66
d2qf3a1	210	Stress sensor protease DegS, catalytic domain {Esc	98.65
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	98.64
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	98.57
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	98.54
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	98.51
d1ky9a2	249	Protease Do (DegP, HtrA), catalytic domain {Escher	98.48
d1lvmb_	219	TEV protease (nucleat inclusion protein A, NIA) {T	98.28
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	98.19
d2bhga1	199	3C cysteine protease (picornain 3C) {Foot-and-mout	98.12
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	97.65
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	97.15
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	96.49
d1cqqa_	180	3C cysteine protease (picornain 3C) {Human rhinovi	96.14
d2sgaa_	181	Protease A {Streptomyces griseus, strain k1 [TaxId	90.86
d2o8la1	216	V8 protease {Staphylococcus aureus [TaxId: 1280]}	86.23
d2h6ma1	212	3C cysteine protease (picornain 3C) {Human hepatit	83.16
d1agja_	242	Epidermolytic (exfoliative) toxin A {Staphylococcu	82.18
d2qaaa1	185	Protease B {Streptomyces griseus, strain k1 [TaxId	82.12

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-46  Score=332.61  Aligned_cols=231  Identities=35%  Similarity=0.684  Sum_probs=201.8

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC---CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS---RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~v~~i  193 (388)
                      |+||+++.+++|||+|.|+..+.++|+||||+++||||||||+...  ......+.+..+.....   ....+.+.|.++
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   78 (235)
T d1ekbb_           1 IVGGSDSREGAWPWVVALYFDDQQVCGASLVSRDWLVSAAHCVYGR--NMEPSKWKAVLGLHMASNLTSPQIETRLIDQI   78 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTC--CSSGGGEEEEESCCBTTCCCCTTCEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEEcCCEEEEChhhccCC--CCCccceeeeecccccccccCcceeEeeeeee
Confidence            6899999999999999999988999999999999999999999763  23445566666655443   445678899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      ++||+|+.....||||||+|++|+.|++.++|||||..... ..+..+.++||+........   ...|+...+.+++.+
T Consensus        79 ~~hp~~~~~~~~~diAli~L~~~v~~~~~~~picLp~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~~~~~~  155 (235)
T d1ekbb_          79 VINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLPEENQVFPPGRICSIAGWGALIYQGST---ADVLQEADVPLLSNE  155 (235)
T ss_dssp             EECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCB---CSBCEEEEEEBCCHH
T ss_pred             eecccccccCccchhhhhhhcCceecCCceeeEECCCccccCCcceEEEEecccccccCCcc---cccceeeEEEEecHH
Confidence            99999999999999999999999999999999999987654 56788999999998775443   667899999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      .|...+.    .....+.++|+....+..+.|                              .||+||||++..+++|+|
T Consensus       156 ~~~~~~~----~~~~~~~~~c~~~~~~~~~~c------------------------------~gdsG~pl~~~~~~~~~l  201 (235)
T d1ekbb_         156 KCQQQMP----EYNITENMVCAGYEAGGVDSC------------------------------QGDSGGPLMCQENNRWLL  201 (235)
T ss_dssp             HHHHHCT----TSCCCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEEEETTEEEE
T ss_pred             Hhccccc----ccccCcccEEEEcCCCCcccc------------------------------cCCCCCccEEccCCEEEE
Confidence            9987765    346788899998887777889                              999999999999999999


Q ss_pred             EEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       353 ~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +||+|+|..|+..+.|++||+|++|++||+++|+
T Consensus       202 ~Gi~S~g~~~~~~~~p~v~t~v~~y~~WI~~~i~  235 (235)
T d1ekbb_         202 AGVTSFGYQCALPNRPGVYARVPRFTEWIQSFLH  235 (235)
T ss_dssp             EEEEEECSSSSCTTCCEEEEEGGGTHHHHHTTCC
T ss_pred             EEEEEecCCCCCCCCCEEEEEHHHHHHHHHHhhC
Confidence            9999999999888999999999999999999874

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-45  Score=328.13  Aligned_cols=233  Identities=37%  Similarity=0.704  Sum_probs=199.5

Q ss_pred             EecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCC--CCccceEEEEeccccCC---CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPS--PLSASQINVTLKEHDLS---RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~--~~~~~~~~v~~g~~~~~---~~~~~~~~v  190 (388)
                      |+||.++.+++|||+|.|+.. +.++|+||||+++||||||||+.+...  ......+.+..+..+..   .+..+.+.|
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~C~GtlIs~~~VLTaA~Cv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   80 (241)
T d1eaxa_           1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRL   80 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCCBTTCTTSTTCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCCEEEEEEEEcCCEEEECeeeeecCCceeeeccceeeEEeeeeecccccCCCcEEEEE
Confidence            689999999999999999765 467999999999999999999986432  23444556666655443   345678999


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .++++||+|+.....+|||||+|+.|+.+.+.++|||||..... ..+..+...||+........   ...|+...++++
T Consensus        81 ~~i~~Hp~y~~~~~~~diAll~L~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~~~  157 (241)
T d1eaxa_          81 KRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGGTG---ALILQKGEIRVI  157 (241)
T ss_dssp             EEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCB---CSBCEEEEEEEC
T ss_pred             EEEEECCcccccccCCcccccccCCceecCcccceeeccccccccccceeEEEeccCCccccccc---cccceEEEEEEe
Confidence            99999999999999999999999999999999999999976654 56778899999887765543   678999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec-CC
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG-AE  348 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~-~~  348 (388)
                      +.++|+..+..     .+...++|++...+..+.|                              .||+||||++.. ++
T Consensus       158 ~~~~C~~~~~~-----~~~~~~~c~~~~~~~~~~c------------------------------~gd~G~pl~~~~~~g  202 (241)
T d1eaxa_         158 NQTTCENLLPQ-----QITPRMMCVGFLSGGVDSC------------------------------QGDSGGPLSSVEADG  202 (241)
T ss_dssp             CHHHHHHHSTT-----TCCTTEEEEECTTCSSBCC------------------------------TTCTTCEEEEECTTS
T ss_pred             CHHHHHHHhCc-----cccCccceeccCCCCcccc------------------------------cCcccceeEEEcCCC
Confidence            99999998863     4678899998877778888                              999999999865 68


Q ss_pred             ccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       349 ~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+|+||+|++..|...+.|.+|+||++|++||++++++
T Consensus       203 ~~~L~Gi~s~~~~c~~~~~p~vft~V~~y~~WI~~~~gi  241 (241)
T d1eaxa_         203 RIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENTGV  241 (241)
T ss_dssp             CEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHHHCC
T ss_pred             eEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhCc
Confidence            999999999999998889999999999999999999875

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-46  Score=328.30  Aligned_cols=230  Identities=38%  Similarity=0.691  Sum_probs=198.4

Q ss_pred             EecceecCCCCcceEEEEccCC---ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~---~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~  191 (388)
                      |+||+++.+++|||+|.|+..+   .++|+||||+++||||||||+...   .....+.+..+.....  ....+.+.|.
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~   77 (237)
T d1xx9a_           1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGV---ESPKILRVYSGILNQSEIKEDTSFFGVQ   77 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGTTC---SCGGGEEEEESCSBGGGCCTTCCCEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCCccEEEEEEEEeCCEEEeCeEeeecc---cCccceeeecccccccccccceEEEEee
Confidence            6899999999999999997543   468999999999999999999762   3345556655544332  4455778999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.||.|......+|||||+|++++.+.+.++|||++..... .....+.+.||+........   ...++...+.+++
T Consensus        78 ~~~~h~~~~~~~~~~diAll~L~~~v~~~~~~~pi~~~~~~~~~~~~~~~~~~G~~~~~~~~~~---~~~~~~~~~~~~~  154 (237)
T d1xx9a_          78 EIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKI---QNTLQKAKIPLVT  154 (237)
T ss_dssp             EEEECTTCSCTTTSCCCEEEEESSCCCCBTTBCCCBCCCTTCTTCCCSCEEEEESCCSSTTCCC---CSBCEEEECCEEC
T ss_pred             EEEEecccccccccceeEEEEeccccccccccceEEecccccccccccccEEEEeecccccccC---CCccEEEEEEEeC
Confidence            9999999999999999999999999999999999999887765 56678899999987765543   6789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|+..+..    ..+.+.++|++...+..+.|                              .||+||||++..+++|
T Consensus       155 ~~~C~~~~~~----~~~~~~~~c~~~~~~~~~~c------------------------------~gdsG~pl~~~~~~~~  200 (237)
T d1xx9a_         155 NEECQKRYRG----HKITHKMICAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVW  200 (237)
T ss_dssp             HHHHHHHTTT----SCCCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEEEETTEE
T ss_pred             HHHHhhhhcC----CCCCCceEEEecCCCCcccc------------------------------cCCccceeEEecCCEE
Confidence            9999988763    36688999998877778889                              9999999999999999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +|+||+|++.+|...+.|++||||++|++||+++|+
T Consensus       201 ~l~Gi~s~g~~~~~~~~p~vft~v~~~~~WI~~~~~  236 (237)
T d1xx9a_         201 HLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ  236 (237)
T ss_dssp             EEEEEEEEESSSSCTTCCEEEECGGGGHHHHHHHHC
T ss_pred             EEEEEEEeCCCCCCCCCCEEEEEhHHhHhHHHHHHC
Confidence            999999999999888999999999999999999986

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=100.00  E-value=8.6e-46  Score=324.91  Aligned_cols=222  Identities=33%  Similarity=0.663  Sum_probs=190.2

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||+++++++|||+|+|. ++.++|+||||+++||||||||+.+      .....+................+.+++.|
T Consensus         1 i~gG~~~~~~~~Pw~v~l~-~~~~~C~GtLIs~~~VLTAAhCv~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (222)
T d1hj8a_           1 IVGGYECKAYSQPHQVSLN-SGYHFCGGSLVNENWVVSAAHCYKS------RVEVRLGEHNIKVTEGSEQFISSSRVIRH   73 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEE-SSSEEEEEEEEETTEEEECGGGCCS------SCEEEESCSBTTSCCSCCEEEEEEEEEEC
T ss_pred             CCCCEECCCCCCCeEEEEE-CCCEEEEEEEeeCCEEEeCceeccc------ccCcceeeccccccCCccccccceEEEec
Confidence            6899999999999999995 5678999999999999999999976      22333333333333444456677889999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA  276 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~  276 (388)
                      |.|......+|||||+|++|+.+++.++|||||.... ..+..+.+.|||.+......   ...|+...+.+++.++|+.
T Consensus        74 ~~~~~~~~~~diALl~l~~~v~~~~~~~picl~~~~~-~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~~~~~~~C~~  149 (222)
T d1hj8a_          74 PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCA-PAGTMCTVSGWGNTMSSTAD---SNKLQCLNIPILSYSDCNN  149 (222)
T ss_dssp             TTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSSCC-CTTCEEEEEESSCCCCSSCC---TTBCEEEEEEBCCHHHHHH
T ss_pred             ccccccccCCcEEEEecccceeeeceeEEEECCCcCC-CCCceEEEEecccccccccc---ccccEEEEEEEeCHHHHhh
Confidence            9999988899999999999999999999999998766 67888999999988765543   6789999999999999998


Q ss_pred             HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEE
Q psy13815        277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV  356 (388)
Q Consensus       277 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~  356 (388)
                      .+..     .+.+.++|++...+..+.|                              .||+||||++.    ++|+||+
T Consensus       150 ~~~~-----~~~~~~~C~~~~~~~~~~c------------------------------~gdsGgPl~~~----~~l~Gi~  190 (222)
T d1hj8a_         150 SYPG-----MITNAMFCAGYLEGGKDSC------------------------------QGDSGGPVVCN----GELQGVV  190 (222)
T ss_dssp             HSTT-----CCCTTEEEESCTTSSCBCC------------------------------TTCTTCEEEET----TEEEEEE
T ss_pred             hccc-----ccccceEEEccCCCCcccc------------------------------cCCcccEEEEC----CEEEEEE
Confidence            8752     5788999998877778889                              99999999985    4799999


Q ss_pred             EecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        357 STGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       357 s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      |++.+|...+.|.+||||+.|++||+++|+.|
T Consensus       191 S~g~~~~~~~~p~v~t~v~~y~~WI~~~i~~~  222 (222)
T d1hj8a_         191 SWGYGCAEPGNPGVYAKVCIFNDWLTSTMASY  222 (222)
T ss_dssp             EECSSSSCTTCCEEEEEGGGGHHHHHHHHHCC
T ss_pred             EEecCCCCCCCCEEEEEHHHHHHHHHHHHHhC
Confidence            99999998899999999999999999999877

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-45  Score=327.44  Aligned_cols=233  Identities=30%  Similarity=0.558  Sum_probs=197.8

Q ss_pred             eEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEE
Q psy13815        116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRI  193 (388)
Q Consensus       116 ~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i  193 (388)
                      ||+||+++.+++|||+|+|+..+.++|+||||+++||||||||+.+.   .....+.|..+.....  ....+.+.+.++
T Consensus         2 ri~gG~~a~~~e~Pw~v~i~~~~~~~C~GtLIs~~~VLTAAhCv~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i   78 (240)
T d1mzaa_           2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRF---TKGQSPTVVLGAHSLSKNEASKQTLEIKKF   78 (240)
T ss_dssp             CCCCCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGSCTT---CSCSCEEEEESCSBSSSCCTTCEEEEEEEE
T ss_pred             EEECCEECCCCCCCcEEEEEECCeEEEEEEEEeCCEEEECeEccccc---CCcceeEEEEeecccCcCCccceeEeeeee
Confidence            79999999999999999999988999999999999999999999873   2344566777665554  344567889999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      +.||.|+.....+|||||+|++++.+++.++|||||..........+.+.|||.+.....  ..+..|+...+.++..++
T Consensus        79 ~~h~~~~~~~~~~diAll~l~~~~~~~~~~~picL~~~~~~~~~~~~~~~g~g~~~~~~~--~~~~~l~~~~~~~~~~~~  156 (240)
T d1mzaa_          79 IPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSL--RPSDTLREVTVTVLSRKL  156 (240)
T ss_dssp             EECCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCS--SCCSBCEEEEEEECCHHH
T ss_pred             eeeccccccccCcceEEEeecceeeeeeccccccccccccccceeeEEEEEeccccCCcC--cCCcccEEEEEEEecHHH
Confidence            999999999999999999999999999999999999877767777899999998765332  236789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |+...... ........++|++...+..+.|                              .|||||||+++    ++|+
T Consensus       157 C~~~~~~~-~~~~~~~~~~c~~~~~~~~~~C------------------------------~gDsGgPl~~~----~~l~  201 (240)
T d1mzaa_         157 CNSQSYYN-GDPFITKDMVCAGDAKGQKDSC------------------------------KGDAGGPLICK----GVFH  201 (240)
T ss_dssp             HTSTTTTT-TTTCCCTTEEEEECTTSCCCCC------------------------------TTCTTCEEEET----TEEE
T ss_pred             hhhhhhcc-CCcccccceEEeccCCCCccCc------------------------------cCCCCCeEEEC----CEEE
Confidence            98754422 2234577899998887778889                              99999999985    4899


Q ss_pred             EEEEecCCCCCCCCCeEEEeCC-CchhHHhhhhccC
Q psy13815        354 GLVSTGIGCARPRLPGLYTRLT-RYIGWISDTLDIH  388 (388)
Q Consensus       354 Gi~s~g~~c~~~~~p~v~t~V~-~~~~WI~~~i~~~  388 (388)
                      ||+|+|..|+..+.|++||||+ +|++||+++|+-|
T Consensus       202 Gi~S~g~~c~~~~~p~vftrvs~~y~~WI~~~i~~~  237 (240)
T d1mzaa_         202 AIVSGGHECGVATKPGIYTLLTKKYQTWIKSNLVPP  237 (240)
T ss_dssp             EEECSSCCSSCTTCCEEEEECCHHHHHHHHHHTCCS
T ss_pred             EEEEeCCCCCCCCCCeEEEEEHHHHHHHHHHHccCC
Confidence            9999999998889999999998 6899999999753

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-45  Score=324.67  Aligned_cols=225  Identities=30%  Similarity=0.568  Sum_probs=189.8

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEecccc--CCCCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHD--LSRPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~--~~~~~~~~~~v~~i~  194 (388)
                      |+||.+|.+++|||+|+|...+.++|+||||+++||||||||+.+.      .. .+.+....  ......+...+..++
T Consensus         1 ivgG~~a~~~e~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~i~   73 (232)
T d1orfa_           1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNK------RS-QVILGAHSITREEPTKQIMLVKKEF   73 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEECSSSCEEEEEEEETTEEEECTTCCCCT------TC-EEEESCSBSSSCCTTCEEECEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEecCCEEEEChhhcCCC------Cc-ceeeeeeeccccccccccceEEEEE
Confidence            6899999999999999999988999999999999999999999762      11 22222222  234455677899999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      .||+|+.....||||||+|.+++.+++.++|+|||..... ..+..+.++|||........   +..|+...+++++.++
T Consensus        74 ~hp~y~~~~~~~diAll~l~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~g~~~~~~~~---~~~l~~~~~~~~~~~~  150 (232)
T d1orfa_          74 PYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASW---SDTLREVEITIIDRKV  150 (232)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCC---CSBCEEEEEEEECHHH
T ss_pred             ecccccccccCcceeEeeeccceeeeeeEeeeeecccccccccCceeeeccccccCCcccC---ChhheEEEeecCCHHH
Confidence            9999999999999999999999999999999999976665 56788999999988876544   7789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |+..+... ....+.++++|++...+..+.|                              .||+||||+++    ++|+
T Consensus       151 C~~~~~~~-~~~~~~~~~~C~~~~~~~~~~c------------------------------~gdsG~Pl~~~----~~l~  195 (232)
T d1orfa_         151 CNDRNHYN-FNPVIGMNMVCAGSLRGGRDSC------------------------------NGDSGSPLLCE----GVFR  195 (232)
T ss_dssp             HTSTTTTT-TTTCCCTTEEEEECSSCCCBCC------------------------------TTCTTCEEEET----TEEE
T ss_pred             Hhhhhhcc-cCccccCceEEeccCCCCcccc------------------------------cccCCCeEEEc----CEEE
Confidence            98765422 2335788999999887778888                              99999999995    4899


Q ss_pred             EEEEecC--CCCCCCCCeEEEeCC-CchhHHhhhhc
Q psy13815        354 GLVSTGI--GCARPRLPGLYTRLT-RYIGWISDTLD  386 (388)
Q Consensus       354 Gi~s~g~--~c~~~~~p~v~t~V~-~~~~WI~~~i~  386 (388)
                      ||+|+|.  .|+.++.|+|||||+ .|++||+++|+
T Consensus       196 GI~S~g~~~~c~~~~~p~vyt~Vs~~y~~WI~~~i~  231 (232)
T d1orfa_         196 GVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIK  231 (232)
T ss_dssp             EEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred             EEEEEECCCCCCCCCCCcEEEEeeHHHHHHHHHHhC
Confidence            9999985  588888999999998 79999999986

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-45  Score=320.96  Aligned_cols=218  Identities=35%  Similarity=0.664  Sum_probs=189.5

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++++++|||+|.|+..+.++|+||||+++||||||||+..        ...+.+|.....  ....+...+.+++
T Consensus         1 i~~G~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~--------~~~v~~g~~~~~~~~~~~~~~~~~~~~   72 (221)
T d1lo6a_           1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKKP--------NLQVFLGKHNLRQRESSQEQSSVVRAV   72 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCT--------TCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEECCcEEEEEEEEeCCEEEECeecccc--------ccceeeceeeecccCccceeeeccccc
Confidence            689999999999999999999999999999999999999999965        235777776654  4455678899999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .||+|+.....+|||||+|++++.+++.++|+|||.... .....+.++|||.......    +..|+...+++++.++|
T Consensus        73 ~~p~y~~~~~~~diAll~l~~~~~~~~~v~pi~l~~~~~-~~~~~~~~~Gwg~~~~~~~----~~~l~~~~~~~~~~~~C  147 (221)
T d1lo6a_          73 IHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCS-ANTTSCHILGWGKTADGDF----PDTIQCAYIHLVSREEC  147 (221)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCCTT-CCCCEEEEEESSCCTTSSC----CSBCEEEEEEEECHHHH
T ss_pred             cCCCcccccccceeEEeecccccceeeeEEeccccccCC-cccceEEEEecccccCCCC----CccceEEEEEEecHHHH
Confidence            999999999999999999999999999999999998766 6788999999998766433    67899999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      ++.+..     ...+.++|..........|                              .||+||||++..    +|+|
T Consensus       148 ~~~~~~-----~~~~~~~~~~~~~~~~~~c------------------------------~gd~G~Pl~~~~----~l~G  188 (221)
T d1lo6a_         148 EHAYPG-----QITQNMLCAGDEKYGKDSC------------------------------QGDSGGPLVCGD----HLRG  188 (221)
T ss_dssp             HHHSTT-----TCCTTEEEEECTTTCCBCC------------------------------TTTTTCEEEETT----EEEE
T ss_pred             HHHcCC-----CccCCceeeeccccCCCCc------------------------------cCCCCCcEEECC----EEEE
Confidence            998862     3456677766666677778                              999999999865    7999


Q ss_pred             EEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        355 LVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       355 i~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+|+|. +|...+.|.+||||++|++||+++|+
T Consensus       189 i~S~g~~~c~~~~~p~vyt~v~~~~~WI~~~ik  221 (221)
T d1lo6a_         189 LVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQ  221 (221)
T ss_dssp             EEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             EEEEccCCCCCCCCCeEEEEHHHHHHHHHHHhC
Confidence            999987 68888899999999999999999986

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=100.00  E-value=5.6e-45  Score=322.91  Aligned_cols=230  Identities=38%  Similarity=0.706  Sum_probs=196.9

Q ss_pred             EecceecCCCCcceEEEEccC----CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH----GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~----~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v  190 (388)
                      |+||+++.+++|||+|.|...    +.++|+|+||+++||||||||+..... .....+.+..+.....  ....+...|
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v   79 (237)
T d2f91a1           1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDY-ENPSGLQIVAGELDMSVNEGSEQIITV   79 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCT-TSCCSEEEEESCSBTTSCCSCCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCCcEEEEEEEEeCCEEEECcccccccCC-ccccceeEEeeecccccccCcceeeeE
Confidence            689999999999999999653    245899999999999999999987432 2344556665554443  344567889


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      .++++||.|+.....+|||||+|.+++.+++.++|||++.... .....+.+.|||.+......   +..|++..+.+++
T Consensus        80 ~~i~~h~~y~~~~~~~diAll~l~~~v~~~~~~~~i~~~~~~~-~~~~~~~~~g~g~~~~~~~~---~~~l~~~~~~~~~  155 (237)
T d2f91a1          80 SKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGH-TATGDVIVTGWGTTSEGGNT---PDVLQKVTVPLVS  155 (237)
T ss_dssp             EEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTC-CCCSEEEEEESCCSSTTCCC---CSBCEEEEEEEEC
T ss_pred             EEEEEccccCCCccccceeeeccccccccCCceeeeeccccCc-ccccceeeccccccCCCCcC---CchheEEEEEEeC
Confidence            9999999999999999999999999999999999999998876 66788999999998776544   6789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|...+.    ...+...++|....+.....|                              .||+||||++..+++|
T Consensus       156 ~~~C~~~~~----~~~~~~~~~c~~~~~~~~~~~------------------------------~gdsG~Pl~~~~~~~~  201 (237)
T d2f91a1         156 DEDCRADYG----ADEILDSMICAGVPEGGKDSC------------------------------QGDSGGPLAASDTGST  201 (237)
T ss_dssp             HHHHHHHHC----TTTSCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEECTTSSC
T ss_pred             HHHHhhhcc----CCcccCceeEeecCCCccccc------------------------------cCCCCCeEEEecCCeE
Confidence            999998876    235678899998877777888                              9999999999999999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhh
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL  385 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i  385 (388)
                      +|+||+|+|..|...+.|.+||+|++|++||++++
T Consensus       202 ~L~Gi~S~g~~c~~~~~p~v~t~v~~y~~WI~~n~  236 (237)
T d2f91a1         202 YLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANA  236 (237)
T ss_dssp             EEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred             EEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHhC
Confidence            99999999999998889999999999999999764

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-45  Score=321.85  Aligned_cols=222  Identities=34%  Similarity=0.683  Sum_probs=187.5

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||+++.+++|||+|.|. .+.++|+||||+++||||||||+...      ....+................+.+++.|
T Consensus         1 i~gG~~~~~~~~Pw~v~l~-~~~~~C~GtLIs~~~VLTaAhCv~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~h   73 (223)
T d1j16a_           1 IVGGYTCQENSVPYQVSLN-SGYHFCGGSLINDQWVVSAAHCYKSR------IQVRLGEHNINVLEGNEQFVNAAKIIKH   73 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-SSSEEEEEEEEETTEEEECGGGCCSS------CEEEESCSBTTSCCSCCEEEEEEEEEEC
T ss_pred             CCCCEECCCCCCCcEEEEe-CCCEEEEEEEEcCCEEEeCHHHCCCc------CCceeeeeeeccccccceeeeeeeEEec
Confidence            6899999999999999996 56789999999999999999999762      1112222222222334557889999999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA  276 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~  276 (388)
                      |.|+.....+|||||+|++++.++++++|||||.... ..+..+++.|||.+......  .+..|+...+.+++.++|+.
T Consensus        74 p~y~~~~~~~diAll~L~~~v~~~~~~~picL~~~~~-~~~~~~~~~g~g~~~~~~~~--~~~~l~~~~~~~~~~~~C~~  150 (223)
T d1j16a_          74 PNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSCA-PAGTQCLISGWGNTLSSGVN--EPDLLQCLDAPLLPQADCEA  150 (223)
T ss_dssp             TTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCSSCC-CTTCEEEEEESSCCCSSSCC--CCSBCEEEEEEEECHHHHHS
T ss_pred             CCCCccccceeEEEEEecCccccceeEEEEecCCcCC-CCCCEEEEEeeeeeeCCCcc--CcceeeEEEEEEEEhhHhhc
Confidence            9999988999999999999999999999999998766 67889999999987665432  26679999999999999997


Q ss_pred             HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEE
Q psy13815        277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV  356 (388)
Q Consensus       277 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~  356 (388)
                      .+.     ..+.++++|++...+....|                              .||+||||+++    ++|+||+
T Consensus       151 ~~~-----~~~~~~~~C~~~~~~~~~~c------------------------------~gd~g~pl~~~----~~L~Gi~  191 (223)
T d1j16a_         151 SSS-----FIITDNMVCVGFLEGGKDAC------------------------------QGDSGGPVVCN----GELQGIV  191 (223)
T ss_dssp             SSS-----CCCCTTEEEESCTTCSCBCC------------------------------TTCTTCEEEET----TEEEEEE
T ss_pred             ccc-----ceeCCCceEEecCCCCCccc------------------------------CCccCCcEEEe----eEEEEEE
Confidence            654     35788999998887778888                              99999999985    4799999


Q ss_pred             EecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        357 STGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       357 s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |++..|...+.|++||||+.|++||+++|+.
T Consensus       192 s~~~~~~~~~~p~vft~v~~~~~WI~~~i~~  222 (223)
T d1j16a_         192 SWGYGCALPDNPGVYTKVCNYVDWIQDTIAA  222 (223)
T ss_dssp             EECSSSSCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred             EEccCCCCCCCCEEEEEhHHhHHHHHHHHhc
Confidence            9999999889999999999999999999975

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=325.51  Aligned_cols=228  Identities=28%  Similarity=0.564  Sum_probs=183.7

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++..+ |||+|+|++++.++|+||||+++||||||||+.+    .....+.|++|..+......  ..+.+++.|
T Consensus         1 ~~~g~~~~~~-~~w~vsi~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~v~~g~~~~~~~~~--~~~~~~~~~   73 (234)
T d1si5h_           1 VVNGIPTRTN-IGWMVSLRYRNKHICGGSLIKESWVLTARQCFPS----RDLKDYEAWLGIHDVHGRGD--EKCKQVLNV   73 (234)
T ss_dssp             CBSCEECSSC-CTTEEEEEESSSEEEEEEEEETTEEEEEGGGCSS----SCGGGEEEEESCSBSSCSTT--TTTCEEEEE
T ss_pred             CCCCEeCCCC-cCeEEEEEECCcEEEEEEEEeCCEEEECcCccCC----CCCccceEEEEeeccccccc--ceeEEEEee
Confidence            6899999764 9999999999999999999999999999999976    44677889999776653221  122333334


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ  275 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~  275 (388)
                      +.|......+|||||||++|+.++++++|||||..... .....+.+.||+.......    +..|+...+.+++.+.|.
T Consensus        74 ~~~~~~~~~~DIAll~L~~~v~~~~~v~picl~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~l~~~~~~~~~~~~~~  149 (234)
T d1si5h_          74 SQLVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINY----DGLLRVAHLYIMGNEKCS  149 (234)
T ss_dssp             EEEEECSSTTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSC----CCBCEEEEEEEECGGGTC
T ss_pred             ccccCCCcccceEEEeeccCccccccccccccccccccCCcceeEEEecccccccccc----cceeEEEEeeccchhHhh
Confidence            44433333579999999999999999999999987765 4566677777776654432    677999999999999998


Q ss_pred             hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEE
Q psy13815        276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL  355 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi  355 (388)
                      ..+.   ....+.++++|+....+..+.|                              .||+||||++..+++|+|+||
T Consensus       150 ~~~~---~~~~~~~~~~C~~~~~~~~~~c------------------------------~gdsG~pl~~~~~~~~~l~Gi  196 (234)
T d1si5h_         150 QHHR---GKVTLNESEICAGAEKIGSGPC------------------------------EGDYGGPLVCEQHKMRMVLGV  196 (234)
T ss_dssp             C----------CCTTEEEEECSSSCCBCC------------------------------TTCTTCEEEEECSSSEEEEEE
T ss_pred             hhhc---cccccCCccEEEccCCcCCCCC------------------------------cCccccceEEecCCeEEEEEE
Confidence            8775   2446788999998877778888                              999999999999999999999


Q ss_pred             EEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        356 VSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       356 ~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      +|++..|+..+.|.+||||+.|++||+++|+.|
T Consensus       197 ~s~g~~c~~~~~p~vyt~i~~~~~WI~~~i~~~  229 (234)
T d1si5h_         197 IVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTY  229 (234)
T ss_dssp             ECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred             EEeCCCCCCCCCCEEEEEHHHHHHHHHHHhhcC
Confidence            999999988899999999999999999999876

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.4e-45  Score=327.13  Aligned_cols=242  Identities=33%  Similarity=0.544  Sum_probs=195.8

Q ss_pred             CCCCccCC-CCCeEecceecCCCCcceEEEEccC----CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccc-
Q psy13815        105 CGRSLASR-RTGKIVGGLAANPGEFPWIVSLKRH----GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH-  178 (388)
Q Consensus       105 cg~~~~~~-~~~~i~~g~~~~~~~~Pw~v~i~~~----~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~-  178 (388)
                      ||+...++ ...||+||+++.+++|||+|.|...    ..++|+|+||+++||||||||+...    ............ 
T Consensus         1 cg~~~~~~~~~~ri~gG~~a~~~~~Pw~v~i~~~~~~~~~~~C~G~LIs~~~VLTaAhC~~~~----~~~~~~~~~~~~~   76 (251)
T d1pytd_           1 CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNT----LTYRVALGKNNLE   76 (251)
T ss_dssp             CCCCSSCCCSSSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTT----CCEEEEESCSBTT
T ss_pred             CcCCCCCCCCCCeEECCEECCCCCCCcEEEEEEEeCCCceeEEeEEEEcCCeEEEeeeccccc----ccceeeeeeeeee
Confidence            67655442 4678999999999999999999642    2468999999999999999999762    111122222211 


Q ss_pred             cCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCC
Q psy13815        179 DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRR  257 (388)
Q Consensus       179 ~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~  257 (388)
                      .......+...|.++++||.|+.....||||||+|.+|+.|++.++||||+..... ..+..+.+.||+.+...+..   
T Consensus        77 ~~~~~~~~~~~v~~i~~h~~y~~~~~~~diali~l~~pi~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~~~~~---  153 (251)
T d1pytd_          77 VEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPI---  153 (251)
T ss_dssp             CSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCC---
T ss_pred             cccCCCceEEeEEEEEEeeeecccccCCceeeeecCCCcccCceeEEEEeeccccCCCCceeEEEecCccccCCCcc---
Confidence            22244556789999999999999999999999999999999999999999988765 56778899999988776543   


Q ss_pred             CccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCc
Q psy13815        258 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD  337 (388)
Q Consensus       258 ~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd  337 (388)
                      ...++...+.+++..+|...+.   ........++|++.. +..+.|                              .||
T Consensus       154 ~~~~~~~~~~~~~~~~C~~~~~---~~~~~~~~~~c~~~~-~~~~~c------------------------------~gd  199 (251)
T d1pytd_         154 AAELQQGLQPVVDYATCSQRDW---WGTTVKETMVCAGGD-GVISAC------------------------------NGD  199 (251)
T ss_dssp             CSBCBCCEEECBCHHHHTSTTT---TTTTCCTTEEEECCS-CSSCCC------------------------------CSC
T ss_pred             cceeceeeccccCHHHHhhhhc---ccccccCceEEeccC-CCCccc------------------------------cCC
Confidence            5677888889999999987654   234567889999754 356778                              999


Q ss_pred             CCCceEEecCCccEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        338 SGGPLMLLGAESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       338 sGgPL~~~~~~~~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +||||++..+++|+|+||+|++.  .|...+.|++||||+.|++||+++|+.
T Consensus       200 ~G~Pl~~~~~~~~~L~Gi~S~~~~~~c~~~~~p~vyt~v~~y~~WI~~~i~~  251 (251)
T d1pytd_         200 SGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKLQL  251 (251)
T ss_dssp             TTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHTTC
T ss_pred             CCCceEEeeCCEEEEEEEEEECCCCCCCCCCCCeEEEEHHHhHHHHHHhccC
Confidence            99999999999999999999976  577778999999999999999999974

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-45  Score=322.01  Aligned_cols=228  Identities=32%  Similarity=0.581  Sum_probs=191.7

Q ss_pred             EecceecCCCCcceEEEEccCC-ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG-GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMF  195 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~-~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~  195 (388)
                      |+||.++.+++|||+|.|.... .++|+||||+++||||||||+.+.    ....+..............+.+.+.+++.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~C~GtlIs~~~VLTaAhCv~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   76 (233)
T d2p3ub1           1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQA----KRFKVRVGDRNTEQEEGGEAVHEVEVVIK   76 (233)
T ss_dssp             CBSSEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGGGSC----SSCEEEESCSBTTSCCSCCEEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEecCCCeEEEEEEEeCCEEEECceecccc----cccccccccccccccCCCceeecceeEEE
Confidence            6899999999999999997654 689999999999999999999762    12222333333333455566789999999


Q ss_pred             CCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC----CCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeech
Q psy13815        196 HPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL----DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN  271 (388)
Q Consensus       196 hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~----~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~  271 (388)
                      ||+|+.....+|||||+|++|+.+++.++|+|||....    ......+.+.+|+........   ...++...+++++.
T Consensus        77 h~~~~~~~~~~diAll~L~~pv~~~~~v~pi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  153 (233)
T d2p3ub1          77 HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQ---STRLKMLEVPYVDR  153 (233)
T ss_dssp             CTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCB---CSBCEEEEEEBCCH
T ss_pred             eecccccccccceeeeecccceeecccccccccCCcccccccccccceEEEecCCccccCCCc---cccccccccccccc
Confidence            99999999999999999999999999999999997543    155667888899887765443   66789999999999


Q ss_pred             hhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       272 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      +.|...+.     ..+..+++|+.........|                              .||+||||++..+++|+
T Consensus       154 ~~C~~~~~-----~~~~~~~~~~~~~~~~~~~~------------------------------~gdsGgpl~~~~~~~~~  198 (233)
T d2p3ub1         154 NSCKLSSS-----FIITQNMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFKDTYF  198 (233)
T ss_dssp             HHHHHHCS-----SCCCTTEEEESCSSSSCBCC------------------------------TTTTTCEEEEEETTEEE
T ss_pred             hhhhcccC-----ceEeecceeeecccccCCCc------------------------------CCCcccccEEecCCeEE
Confidence            99988775     24567889988777777778                              99999999999999999


Q ss_pred             EEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       352 l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+||+|++..|..++.|++||||++|++||+++|+
T Consensus       199 L~Gv~s~g~~c~~~~~p~vyt~v~~y~~WI~~~i~  233 (233)
T d2p3ub1         199 VTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK  233 (233)
T ss_dssp             EEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC
T ss_pred             EEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhC
Confidence            99999999999988999999999999999999985

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=323.87  Aligned_cols=234  Identities=34%  Similarity=0.663  Sum_probs=195.2

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++..++|||+|.|..++.++|+||||+++||||||||+.+...  ...................+...+.+++.|
T Consensus         1 i~gG~~~~~~e~Pw~v~I~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~h   78 (255)
T d1z8ga1           1 IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNR--VLSRWRVFAGAVAQASPHGLQLGVQAVVYH   78 (255)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGCCGGGC--CGGGEEEEESCSBTTCTTSEEECEEEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEEECCcEEEEEEEEeCCEEEECceecCCCCC--ccceeeEeeeeecccCCccEEEEEEEEEEE
Confidence            689999999999999999999899999999999999999999976321  122223333333334455667889999999


Q ss_pred             CC------CCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        197 PS------HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       197 p~------y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      |.      |+.....||||||+|++++.+++.++|+||+..... ..+..+.+.||+........   +..++...++++
T Consensus        79 ~~~~~~~~~~~~~~~~DiAll~L~~~v~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~~~~~~~~---~~~l~~~~~~~~  155 (255)
T d1z8ga1          79 GGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQ---AGVLQEARVPII  155 (255)
T ss_dssp             TTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCB---CSBCEEEEEEEE
T ss_pred             eeeccccccccCCccccEEEEecCCccccCcccccceecccCcccCCCcEEEeeccccccCCCcc---cceeEEEEEEEe
Confidence            98      566677899999999999999999999999987654 66788999999887766543   678999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec---
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG---  346 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~---  346 (388)
                      +.+.|+..+.   ....+.+.++|+....+..+.|                              .||+||||++..   
T Consensus       156 ~~~~C~~~~~---~~~~~~~~~~~~~~~~~~~~~c------------------------------~gdsGgPl~~~~~~~  202 (255)
T d1z8ga1         156 SNDVCNGADF---YGNQIKPKMFCAGYPEGGIDAC------------------------------QGDSGGPFVCEDSIS  202 (255)
T ss_dssp             CHHHHTSTTT---TTTCCCTTEEEESCTTCSCBCC------------------------------TTCTTCEEEEEECTT
T ss_pred             CHHHhhhhhc---cCccccCcceEEecCCCCcccc------------------------------cCccccceEEecCCC
Confidence            9999987654   2345678888888877778889                              999999999875   


Q ss_pred             -CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        347 -AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       347 -~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                       .++|+|+||+||+.+|..++.|++||||+.|++||+++|+.|
T Consensus       203 ~~~~~~l~Gi~S~g~~c~~~~~p~vft~V~~y~~WI~~~i~~~  245 (255)
T d1z8ga1         203 RTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTH  245 (255)
T ss_dssp             SSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHHHHHHHHT
T ss_pred             CCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHHHHHc
Confidence             468999999999999999999999999999999999999764

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.5e-44  Score=316.57  Aligned_cols=220  Identities=32%  Similarity=0.603  Sum_probs=190.0

Q ss_pred             EecceecCCCCcceEEEEcc----CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKR----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~----~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v  190 (388)
                      |+||.++.+++|||+|+|..    .+.++|+||||+++||||||||+..        ...|++|..+..  ....+...|
T Consensus         1 I~gG~~a~~ge~P~~v~i~~~~~~~~~~~C~GtLI~~~~VLTaAhC~~~--------~~~v~~G~~~~~~~~~~~~~~~v   72 (227)
T d1fi8a_           1 IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSGS--------KIQVTLGAHNIKEQEKMQQIIPV   72 (227)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECTTC-CCEEEEEEEETTEEEECGGGCCS--------EEEEEESCSBTTSCCTTCEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEeCCCCceEEEEEEEeCCEEEEecccccc--------cceeeeeecccccCCCCceEEEE
Confidence            68999999999999999953    2367899999999999999999854        356888877654  345567889


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .+++.||.|+.....+|||||+|++++.|++.++||||+..... ..+..+.+.|||........   +..++...+.++
T Consensus        73 ~~i~~~~~~~~~~~~~diall~l~~~i~~~~~v~picl~~~~~~~~~~~~~~~~g~g~~~~~~~~---~~~l~~~~~~~~  149 (227)
T d1fi8a_          73 VKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKPGDVCYVAGWGKLGPMGKY---SDTLQEVELTVQ  149 (227)
T ss_dssp             EEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCB---CSBCEEEEEEBC
T ss_pred             EEEEecccccCccccchhhhhhccCceeeeeeEEEEEecccCcccCCCCEEEEEeeccccCCCCC---CceeeEEEEEEE
Confidence            99999999999999999999999999999999999999987754 67788999999988766543   778999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|...+.    .......++|+....+....|                              .||+||||++.    
T Consensus       150 ~~~~c~~~~~----~~~~~~~~~~~~~~~~~~~~c------------------------------~gdsGgPl~~~----  191 (227)
T d1fi8a_         150 EDQKCESYLK----NYFDKANEICAGDPKIKRASF------------------------------RGDSGGPLVCK----  191 (227)
T ss_dssp             CHHHHHHHTT----TTCCTTTEEEESCTTSCCBCC------------------------------TTCTTSEEEET----
T ss_pred             Echhhhhhhh----cccccceeeeeeeccccCCCc------------------------------CCCcCCEEEEC----
Confidence            9999998876    235677788888877778888                              99999999984    


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      ++|+||+|+|..|.  +.|.+||||+.|++||+++|++
T Consensus       192 ~~l~Gi~S~g~~~~--~~p~vyt~v~~y~~WI~~~i~~  227 (227)
T d1fi8a_         192 KVAAGIVSYGQNDG--STPRAFTKVSTFLSWIKKTMKK  227 (227)
T ss_dssp             TEEEEEEEEEETTC--CSCEEEEEGGGGHHHHHHHHCC
T ss_pred             CEEEEEEEEcCCCC--CCCeEEEEHHHHHHHHHHHHcC
Confidence            58999999999885  5799999999999999999974

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-44  Score=318.64  Aligned_cols=230  Identities=33%  Similarity=0.620  Sum_probs=194.1

Q ss_pred             EecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i  193 (388)
                      |+||+.+.+++|||+|.|..+ ..++|+||||+++||||||||+.+      ...+.|.+|..+..  ....+...|.++
T Consensus         1 i~~G~~~~~~e~Pw~v~i~~~~~~~~C~GtLIs~~~VLTaAhCv~~------~~~~~v~~g~~~~~~~~~~~~~~~v~~i   74 (240)
T d1autc_           1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDE------SKKLLVRLGEYDLRRWEKWELDLDIKEV   74 (240)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTSCEEEEEEEEETTEEEECGGGSSS------CSCCEEEESCCBTTCCCTTCEEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEECCCCEEEEEEEEeCCEEEECceeccC------cccceeeccccccccccccceeeeeecc
Confidence            689999999999999999764 477999999999999999999976      34567888877664  445677899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCC-----CCCCCeEEEEEccccCCCCCC--CCCCccceEEEE
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL-----DYSEQSVTVAGWGWTNENPSQ--GRRSNILQKVAL  266 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~-----~~~~~~~~~~GwG~~~~~~~~--~~~~~~l~~~~~  266 (388)
                      +.||.|......+|||||||++|+.+++.|+|+|||....     ...+..+.+.|||........  ......++...+
T Consensus        75 ~~~~~~~~~~~~~DiAli~L~~~v~~~~~v~picL~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~  154 (240)
T d1autc_          75 FVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKI  154 (240)
T ss_dssp             EECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEE
T ss_pred             ccceeeeccccccceeEEEeCCcccCCcccccceeccCcccccccccCCCeEEEEeeccccCCCcccccccceeeeccee
Confidence            9999999999999999999999999999999999986542     256788999999987654332  223556888889


Q ss_pred             EeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec
Q psy13815        267 SVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG  346 (388)
Q Consensus       267 ~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~  346 (388)
                      +++....|...+..     ......+|........+.|                              .||+|+||++..
T Consensus       155 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~------------------------------~gd~G~pl~~~~  199 (240)
T d1autc_         155 PVVPHNECSEVMSN-----MVSENMLCAGILGDRQDAC------------------------------EGDSGGPMVASF  199 (240)
T ss_dssp             EEECHHHHHHHCSS-----CCCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEEEE
T ss_pred             eEEeehhhhhhccc-----ccccceeeeccccccCCCc------------------------------CCccCceeEEcC
Confidence            99999999887752     3456667766666667778                              999999999999


Q ss_pred             CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        347 AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       347 ~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +++|+|+||+|+|..|...+.|++||||+.|++||+++|+.
T Consensus       200 ~~~~~l~Gi~s~g~~c~~~~~p~vftrv~~y~~WI~~~i~~  240 (240)
T d1autc_         200 HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIRD  240 (240)
T ss_dssp             TTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC-
T ss_pred             CCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHhCC
Confidence            99999999999999998888999999999999999999973

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-45  Score=324.07  Aligned_cols=232  Identities=33%  Similarity=0.596  Sum_probs=192.8

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCC-CCCccceEEEEeccccCCC-CceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGP-SPLSASQINVTLKEHDLSR-PSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~-~~~~~~~~~v~~g~~~~~~-~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|.|..+  +.|+||||+++||||||||+.+.. .......+.|++|..+... ...+.+.|.+++
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~~--~~C~GtLIs~~~VLTaAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~   78 (240)
T d2qy0b1           1 IIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVS   78 (240)
T ss_dssp             CBSCEECCTTSSTTEEEEESS--SEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEE
T ss_pred             CCCCEECCCCCcCCEEEECCC--ceEEEEEEcCCEEEEChHhCCCcccccccccceeeeeeeccccccCCcceEEEEEEE
Confidence            689999999999999998754  579999999999999999997643 2233456789999765542 233567899999


Q ss_pred             ECCCCCCC---CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        195 FHPSHSCS---SFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       195 ~hp~y~~~---~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +||+|+..   ...+|||||+|++|+.+++.++||||+..... ..+..+.+.|||......     +..++...+.+++
T Consensus        79 vhp~y~~~~~~~~~~DiAll~L~~pi~~~~~v~pi~l~~~~~~~~~~~~~~~~g~g~~~~~~-----~~~~~~~~~~~~~  153 (240)
T d2qy0b1          79 VHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKI-----AHDLRFVRLPVAN  153 (240)
T ss_dssp             ECTTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSC-----CSBCEEEEEEBCC
T ss_pred             eccccccccccccCCCceEEecCCccccccccceEEecccccccccCceeeecccccccccc-----cccceEEEEEEcC
Confidence            99999874   35689999999999999999999999987654 567889999999876542     5678889999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecC--C
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA--E  348 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~--~  348 (388)
                      .+.|...+........+.+.++|+.......+.|                              .||||+||++..+  +
T Consensus       154 ~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~------------------------------~gdsG~pl~~~~~~~~  203 (240)
T d2qy0b1         154 PQACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC------------------------------QGDSGGVFAVRDPNTD  203 (240)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCC------------------------------TTCTTCEEEEECTTTC
T ss_pred             HHHHHHHhhccccCCceecceEEeccCCccceee------------------------------ccccccceEEEeCCCC
Confidence            9999998876655556788999998877777777                              9999999999764  5


Q ss_pred             ccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       349 ~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+|+||+|+|.+|..  .|+|||||++|++||+++|++
T Consensus       204 ~~~l~Gi~S~g~~c~~--~p~vft~v~~~~~WI~~~i~~  240 (240)
T d2qy0b1         204 RWVATGIVSWGIGCSR--GYGFYTKVLNYVDWIKKEMEE  240 (240)
T ss_dssp             CEEEEEEEEECSSSSS--SCEEEEEGGGGHHHHHHHTTC
T ss_pred             eEEEEEEEEECCCCCC--CCeEEEEHHHHHHHHHHHhcC
Confidence            7999999999999974  489999999999999999974

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-45  Score=323.80  Aligned_cols=232  Identities=32%  Similarity=0.621  Sum_probs=195.0

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|+.  .++|+||||+++||||||||+.+.  ......+.|..|..+......+.+.+.+++.|
T Consensus         1 i~gG~~~~~g~~Pw~v~i~~--~~~C~GtLIs~~~VLTaAhCv~~~--~~~~~~~~v~~~~~~~~~~~~~~~~v~~i~~h   76 (242)
T d1q3xa1           1 IYGGQKAKPGDFPWQVLILG--GTTAAGALLYDNWVLTAAHAVYEQ--KHDASALDIRMGTLKRLSPHYTQAWSEAVFIH   76 (242)
T ss_dssp             CBSCEECCTTSSTTEEEECS--SSSEEEEEETTTEEEECHHHHHHH--HTTTCCCEEEESCSBTTCSCSEEEEEEEEEEC
T ss_pred             CCCCEECCCCCcCcEEEEcC--CCEEEEEEEcCCEEEEChhhccCC--CCCcceEEEEeeeeeeccccccccceeeeEEe
Confidence            68999999999999999973  578999999999999999999652  12345667888887777777778899999999


Q ss_pred             CCCCCCC-CCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC---CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        197 PSHSCSS-FNNDIALLELTRSIQWSDLIRPACLPSGSLD---YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       197 p~y~~~~-~~~DIALl~L~~~v~~~~~v~picLp~~~~~---~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      |+|+... ..||||||||++|+.|+++++|+|++.....   ..+......||+.......    +..++...+++++.+
T Consensus        77 p~y~~~~~~~~DiAll~L~~~~~~~~~v~pic~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~l~~~~~~~~~~~  152 (242)
T d1q3xa1          77 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFL----ARNLMYVDIPIVDHQ  152 (242)
T ss_dssp             TTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESSCCTTSSC----CSBCEEEEEEEECHH
T ss_pred             eccccccccCccccccccCCCccccccEEEEeccccccccccccceeeeeeeccccccCcc----ccceeeeeccccCHH
Confidence            9998755 5799999999999999999999999876543   4556677888877655432    678999999999999


Q ss_pred             hhhhHhhcCC-CccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec--CCc
Q psy13815        273 VCQAWYQSEG-KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG--AES  349 (388)
Q Consensus       273 ~C~~~~~~~~-~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~--~~~  349 (388)
                      +|...+.... ....+...++|++...+....|                              .||+||||++..  .++
T Consensus       153 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c------------------------------~gdsGgpl~~~~~~~~~  202 (242)
T d1q3xa1         153 KCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC------------------------------RGDSGGALVFLDSETER  202 (242)
T ss_dssp             HHHHHTSSTTSCTTCSCTTEEEECCSSCCSBCC------------------------------TTCTTCEEEEEETTTTE
T ss_pred             HHHhhhhcccccCceeccceeeeeccCCCcccc------------------------------ccccccceEEeeCCCCe
Confidence            9999886432 2345677889998877778888                              999999999964  468


Q ss_pred             cEEEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        350 TQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       350 ~~l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+|+||+|+|. .|+.++.|.+||||+.|++||+++|+
T Consensus       203 ~~l~Gi~S~g~~~c~~~~~p~vft~v~~~~~WI~~~v~  240 (242)
T d1q3xa1         203 WFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS  240 (242)
T ss_dssp             EEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             EEEEEEEEeCCCCCCCCCCCEEEEEHHHhHHHHHHHHH
Confidence            99999999987 68888899999999999999999986

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=100.00  E-value=4.9e-44  Score=314.91  Aligned_cols=225  Identities=34%  Similarity=0.636  Sum_probs=193.2

Q ss_pred             EecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMF  195 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~  195 (388)
                      |+||++|.+++|||+|.|... ..++|+||||+++||||||||+..    .......+..+.........+...+..++.
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (228)
T d1fxya_           1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ----AKRFKVRVGDRNTEQEEGGEAVHEVEVVIK   76 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGTTS----CSSCEEEEECSCTTTCCCCEEEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEcCCCeEEEEEEeeCCEEEECceeeec----ccccccccccccccccCCcceeeeeeccce
Confidence            689999999999999998764 478999999999999999999976    334445555555555555666778889999


Q ss_pred             CCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhh
Q psy13815        196 HPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ  275 (388)
Q Consensus       196 hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~  275 (388)
                      ||.|......+||||++|+.++.++++++|||||.... .....+.++|||.+......  .+..|+...+.+++.++|+
T Consensus        77 ~~~~~~~~~~~diAl~~l~~~~~~~~~~~picL~~~~~-~~~~~~~~~gwg~~~~~~~~--~~~~l~~~~~~~~~~~~C~  153 (228)
T d1fxya_          77 HNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPP-ATGTKCLISGWGNTASSGAD--YPDELQCLDAPVLSQAKCE  153 (228)
T ss_dssp             CTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCCCSSSCC--CCSSCEEEEEEBCCHHHHH
T ss_pred             eeeeeccccccceeehhccccccccccccccccccccc-ccccEEEEEecccccCCCCC--CCchhEEEEEEEeCHHHHh
Confidence            99999988999999999999999999999999998877 56788999999987765432  2678999999999999999


Q ss_pred             hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEE
Q psy13815        276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL  355 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi  355 (388)
                      ..+..     .+.+.++|+.........|                              .||+||||+++    ++|+||
T Consensus       154 ~~~~~-----~~~~~~~c~~~~~~~~~~~------------------------------~gd~G~Pl~~~----~~l~Gi  194 (228)
T d1fxya_         154 ASYPG-----KITSNMFCVGFLEGGKDSC------------------------------QGDSGGPVVCN----GQLQGV  194 (228)
T ss_dssp             HHSTT-----TCCTTEEEESCTTCSCBCC------------------------------TTCTTCEEEET----TEEEEE
T ss_pred             hhcCC-----cccceeeEeecCCCCcccc------------------------------cCccCccEEEe----CEEEEE
Confidence            87752     5678899998877778888                              99999999995    489999


Q ss_pred             EEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        356 VSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       356 ~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|++..|...+.|.+||||++|++||+++|+.
T Consensus       195 ~s~g~~~~~~~~p~vft~v~~~~~WI~~~i~~  226 (228)
T d1fxya_         195 VSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAA  226 (228)
T ss_dssp             EEECSSSSBTTBCEEEEEGGGGHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCEEEEEHHHHHHHHHHHHHh
Confidence            99999998888999999999999999999874

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=100.00  E-value=2.2e-44  Score=315.63  Aligned_cols=222  Identities=33%  Similarity=0.571  Sum_probs=189.4

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|.|+.++.++|+||||+++||||||||+...   .....+.+....... ....+...|.++++|
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~---~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~h   76 (222)
T d1eq9a_           1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGL---SNLNRLKVHVGTNYL-SESGDVYDVEDAVVN   76 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTC---SCGGGEEEEESCSBT-TSCCEEEEEEEEEEC
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEEeCCEEEECceecccc---ccccceeeecceecc-ccCcceeeeeeEEEe
Confidence            6899999999999999999889999999999999999999999862   233444444443333 334467899999999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA  276 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~  276 (388)
                      |+|+.....+|||||+|++++.+++.++|+|||..........+.++||+.+......   +..++...+.+++..+|..
T Consensus        77 ~~y~~~~~~~diAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~c~~  153 (222)
T d1eq9a_          77 KNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNT---PNALQEIELIVHPQKQCER  153 (222)
T ss_dssp             TTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCC---CSBCEEEEEEEECHHHHHH
T ss_pred             ecccccccccceehhhccCCcccccccccccccccccccccceeEEeeeeeecCCCCC---CccceEEEEEEechHHhcc
Confidence            9999999999999999999999999999999998777677888999999987776543   7789999999999999988


Q ss_pred             HhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEE
Q psy13815        277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV  356 (388)
Q Consensus       277 ~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~  356 (388)
                      .+.      ...+.++|++.. +..+.|                              .+|+||||+++    ++|+||+
T Consensus       154 ~~~------~~~~~~~c~~~~-~~~~~c------------------------------~~d~G~pl~~~----~~L~GI~  192 (222)
T d1eq9a_         154 DQW------RVIDSHICTLTK-RGEGAC------------------------------HGDSGGPLVAN----GAQIGIV  192 (222)
T ss_dssp             HSS------SCCTTEEEECCC-TTCBCC------------------------------TTCTTCEEEET----TEEEEEE
T ss_pred             ccc------cccCcceEeccC-CCCCcc------------------------------ccCCcCCEEEc----CEEEEEE
Confidence            665      567899999764 356778                              99999999984    5899999


Q ss_pred             EecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        357 STGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       357 s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |++..|+. +.|.+||||+.|++||+++|++
T Consensus       193 s~~~~c~~-~~p~vyt~v~~y~~WI~~~i~~  222 (222)
T d1eq9a_         193 SFGSPCAL-GEPDVYTRVSSFVSWINANLKK  222 (222)
T ss_dssp             EECSTTTS-SSCEEEEEGGGGHHHHHHTSCC
T ss_pred             EECCCCCC-CCCcEEEEHHHHHHHHHHHhcC
Confidence            99999965 6799999999999999999974

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.1e-44  Score=312.28  Aligned_cols=221  Identities=31%  Similarity=0.661  Sum_probs=189.7

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccC--CCCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL--SRPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~--~~~~~~~~~v~~i~  194 (388)
                      |+||.++..++|||+|.|. ++.++|+||||+++||||||||+.+      ..  .+.++....  .....+...+..++
T Consensus         1 i~GG~~a~~~~~Pw~v~l~-~~~~~C~GtLIs~~~VLTaAhC~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~   71 (223)
T d1hj9a_           1 IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKS------GI--QVRLGEDNINVVEGNEQFISASKSI   71 (223)
T ss_dssp             CCSCEECCTTSSTTEEEEE-SSSEEEEEEEEETTEEEECGGGCCS------SC--EEEESCSSTTSCCSCCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEE-CCCEEEEEEEeeCCEEEeCeeECCC------cC--cceecccccccccceeeeeceeeEE
Confidence            6899999999999999996 5678899999999999999999965      12  234444433  34445678899999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .||.|+.....+|||||+|++++.+++.++|+||+.... .....+.+.||+.+......  .+..++...+++++.++|
T Consensus        72 ~~~~~~~~~~~~diAll~l~~~~~~~~~~~p~cl~~~~~-~~~~~~~~~g~~~~~~~~~~--~~~~l~~~~~~~~~~~~C  148 (223)
T d1hj9a_          72 VHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCA-SAGTQCLISGWGNTKSSGTS--YPDVLKCLKAPILSDSSC  148 (223)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCC-CTTCEEEEEESSCCCSSSCC--CCSSCEEEEEECCCHHHH
T ss_pred             eccccccccccchhhhhhcccceeeeeeeeccccccccc-cccceEEEEeeccccCCCCC--CCccceEEEEeecCHHHH
Confidence            999999999999999999999999999999999998776 66778999999887654332  367799999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+..     .+.++++|+....+....|                              .||+|+||++.    ++|+|
T Consensus       149 ~~~~~~-----~~~~~~~c~~~~~~~~~~~------------------------------~gd~g~pl~~~----~~L~G  189 (223)
T d1hj9a_         149 KSAYPG-----QITSNMFCAYGLEGKGDSC------------------------------QGDSGGPVVCS----GKLQG  189 (223)
T ss_dssp             HHHSTT-----TCCTTEEECCCCCCCCCCC------------------------------TTCTTCEEEET----TEEEE
T ss_pred             HHHhCC-----cccccceEEeecCCCcccc------------------------------cCCCCceeEEe----CEEEE
Confidence            998752     5678899998877777888                              99999999985    47999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      |+|++..|...+.|++||||++|++||+++|+.|
T Consensus       190 i~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~~~  223 (223)
T d1hj9a_         190 IVSWGSGCQAKNKPGVYTKVCNYVSWIKQTIASN  223 (223)
T ss_dssp             EEEECSCCCCCCCCCEEEEGGGGHHHHHHHHTTC
T ss_pred             EEEEcCCCCCCCCCEEEEEHHHHHHHHHHHHhcC
Confidence            9999999988899999999999999999999876

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-44  Score=319.01  Aligned_cols=235  Identities=37%  Similarity=0.679  Sum_probs=192.9

Q ss_pred             EecceecCCCCcceEEEEccCC---ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRI  193 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~---~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i  193 (388)
                      |+||+++.+++|||+|.|...+   .++|+||||+++||||||||+.+..  .....+.+..+..... ...+.++|.++
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~--~~~~~~~~~~~~~~~~-~~~~~~~i~~i   77 (243)
T d2fpza1           1 IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDV--KDLAALRVQLREQHLY-YQDQLLPVSRI   77 (243)
T ss_dssp             CBSCEECCTTSCTTEEEEEECSSSCEEEEEEEEEETTEEEECHHHHCSBC--CCGGGEEEECCCSBTT-TTCCCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCcccEEEEEEEEeCCEEEECceeccCCC--CcceeEEEEeeecccc-cccEEEeeeee
Confidence            6899999999999999997644   4589999999999999999997632  2334555655554443 33467899999


Q ss_pred             EECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        194 MFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       194 ~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      +.||+|+.....||||||+|.+|+.+++.++|+|||..... ..+..+.+.+||........ ..+..|+...+++++..
T Consensus        78 ~~hp~~~~~~~~~diAli~L~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~l~~~~~~~~~~~  156 (243)
T d2fpza1          78 IVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERL-PPPFPLKQVKVPIMENH  156 (243)
T ss_dssp             EECTTCSCTTTSCCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCC-CTTCBCEEEEEEEECHH
T ss_pred             eccccccccccccchhhhcccCccccceeEEEeecCchhhccCCCceeEEEecccccCCCcC-CCCcEeEEEEEeecCHH
Confidence            99999999999999999999999999999999999977755 56788999999987765432 23567899999999999


Q ss_pred             hhhhHhhcCC----CccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCC
Q psy13815        273 VCQAWYQSEG----KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE  348 (388)
Q Consensus       273 ~C~~~~~~~~----~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~  348 (388)
                      +|...+....    ........++|.+.  .....|                              .||+||||++..++
T Consensus       157 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------------------~gdsGgpl~~~~~~  204 (243)
T d2fpza1         157 ICDAKYHLGAYTGDDVRIVRDDMLCAGN--TRRDSC------------------------------QGDSGGPLVCKVNG  204 (243)
T ss_dssp             HHHHHHHTTBCSCTTSCSSCTTEEEECC--SSSBCC------------------------------TTCTTCEEEEEETT
T ss_pred             HhhhhhhcccccCCccceeeeeeEecCC--CCCCCc------------------------------cCCCCCeEEEeeCC
Confidence            9999876321    11134455666543  356777                              99999999999999


Q ss_pred             ccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       349 ~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +|+|+||+|++..|...+.|.+||||++|++||+++|++
T Consensus       205 ~~~L~Gi~s~~~~~~~~~~p~v~t~v~~y~~WI~~~i~~  243 (243)
T d2fpza1         205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPK  243 (243)
T ss_dssp             EEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHTTTSCC
T ss_pred             EEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhCC
Confidence            999999999999998888999999999999999999974

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.9e-44  Score=314.26  Aligned_cols=221  Identities=29%  Similarity=0.581  Sum_probs=181.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||+++.+++|||+|.|+..+.++|+||||+++||||||||+..      ......................+..+..|
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhC~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (225)
T d1npma_           1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQ------KYSVRLGDHSLQSRDQPEQEIQVAQSIQH   74 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS------SCEEEESCSBTTC--CCCEEECEEEEEEC
T ss_pred             CCCCEECCCCCCCCEEEEEECCcEEEEEEEEcCCEEEEchHhCcc------ccccccccccccccCCCcceeeeeeeEEE
Confidence            689999999999999999998899999999999999999999976      22222222222223334455677788887


Q ss_pred             CCC---CCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        197 PSH---SCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       197 p~y---~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      |.|   +.....+|||||+|++|+.+.+.++|+|||.... .....++++|||.+......  .+..|+...+++++.++
T Consensus        75 ~~~~~~~~~~~~~dIAll~L~~~~~~~~~~~~i~l~~~~~-~~~~~~~~~g~g~~~~~~~~--~~~~l~~~~~~~~~~~~  151 (225)
T d1npma_          75 PCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCP-KVGQKCIISGWGTVTSPQEN--FPNTLNCAEVKIYSQNK  151 (225)
T ss_dssp             TTCCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECSSCC-CTTCEEEEEESSCSSSSSCC--CCSBCEEEEEEECCHHH
T ss_pred             EeeeccCcccchhhhhhhhccccccccccccccccccccc-cCCceEEEeccceecCCCCC--CCCccEEEEEEEecHHH
Confidence            755   4566789999999999999999999999998876 67788999999987654332  36789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |++.+..     .+.++++|+.... ..+.|                              .||+||||+++    ++|+
T Consensus       152 C~~~~~~-----~~~~~~~C~~~~~-~~~~c------------------------------~gd~G~pl~~~----~~l~  191 (225)
T d1npma_         152 CERAYPG-----KITEGMVCAGSSN-GADTC------------------------------QGDSGGPLVCD----GMLQ  191 (225)
T ss_dssp             HHHHSTT-----TCCTTEEEEECTT-CCBCC------------------------------TTCTTCEEEET----TEEE
T ss_pred             HhhhccC-----CcCCCEEEecCCC-CCccc------------------------------cCCCCceEEEc----cEEE
Confidence            9988762     5788999998653 56778                              99999999994    5899


Q ss_pred             EEEEecCC-CCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       354 Gi~s~g~~-c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ||+|+|.. |+..+.|++||||++|++||+++|+
T Consensus       192 Gi~S~g~~~c~~~~~p~vyt~V~~~~~WI~~~i~  225 (225)
T d1npma_         192 GITSWGSDPCGKPEKPGVYTKICRYTTWIKKTMD  225 (225)
T ss_dssp             EEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHHC
T ss_pred             EEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHhC
Confidence            99999874 8777889999999999999999985

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-44  Score=318.15  Aligned_cols=229  Identities=32%  Similarity=0.645  Sum_probs=191.5

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||+++.+++|||+|.|.....++|+||||+++||||||||+...    ....+.+................+.++..|
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTaAhCv~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (235)
T d1rfna_           1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETG----VKITVVAGEHNIEETEHTEQKRNVIRIIPH   76 (235)
T ss_dssp             CBTCEECCTTSSTTEEEEESSSTTCEEEEEEETTEEEECGGGCCTT----CCCEEEESCSBSSSCCSCCEEEEEEEEEEC
T ss_pred             CCCCEECCCCCcCCEEEEecCCCEEEEEEEeeCCEEEEChhhcCCC----CceEEEEeecccccCCCCcceeeeeEEeec
Confidence            6899999999999999999888899999999999999999999762    222333333333333444456789999999


Q ss_pred             CCCCCC--CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC---CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeech
Q psy13815        197 PSHSCS--SFNNDIALLELTRSIQWSDLIRPACLPSGSLD---YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN  271 (388)
Q Consensus       197 p~y~~~--~~~~DIALl~L~~~v~~~~~v~picLp~~~~~---~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~  271 (388)
                      |+|+..  ...+|||||||++|+.++..++|+|||.....   .....+.+.||+........   ...|++..+++++.
T Consensus        77 ~~~~~~~~~~~~diAllkL~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~~~~~  153 (235)
T d1rfna_          77 HNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRS---ALVLQYLRVPLVDR  153 (235)
T ss_dssp             TTCBTTTBSSTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHTTSEEEEEESCBSSTTSCB---CSBCEEEEEEBCCH
T ss_pred             cCCCCCcCccCceEEEEEeCCCccCCCccceeeeccccccccccccceEEEeccccccccccc---cCcceEEEEecccc
Confidence            999863  45789999999999999999999999975432   45677899999987766543   67799999999999


Q ss_pred             hhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       272 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      .+|...+..     ...+..+|+....+..+.|                              .||+||||++..+++|+
T Consensus       154 ~~c~~~~~~-----~~~~~~~~~~~~~~~~~~~------------------------------~gdsGgpl~~~~~~~~~  198 (235)
T d1rfna_         154 ATCLRSTKF-----TIYNNMFCAGFHEGGRDSC------------------------------QGDSGGPHVTEVEGTSF  198 (235)
T ss_dssp             HHHHHHCSS-----CCCTTEEEESCSSCSCBCC------------------------------TTCTTCEEEEESSSCEE
T ss_pred             cccccccCc-----eecCCeeEeecCCCCcccc------------------------------CCCCCceeEEecCCeEE
Confidence            999877652     4567778887777778888                              99999999999999999


Q ss_pred             EEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       352 l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+||+|++..|+..+.|.+||+|++|++||+++|++
T Consensus       199 l~Gi~s~g~~~~~~~~p~vyt~v~~~~~WI~~~~~~  234 (235)
T d1rfna_         199 LTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKL  234 (235)
T ss_dssp             EEEEEEEESSSSCTTCCEEEEEGGGTHHHHHHHHCC
T ss_pred             EEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHhcC
Confidence            999999999999889999999999999999999975

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=100.00  E-value=4.3e-44  Score=314.87  Aligned_cols=221  Identities=32%  Similarity=0.599  Sum_probs=187.8

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|+|+.++.++|+||||+++||||||||+..      .....+.+|.....  ....+...|.+++
T Consensus         1 i~gG~~a~~~~~Pw~V~i~~~~~~~C~GtLIs~~~VLTaAhCv~~------~~~~~~~~g~~~~~~~~~~~~~~~v~~i~   74 (226)
T d1azza_           1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDG------AGFVDVVLGAHNIREDEATQVTIQSTDFT   74 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTTEEEEEEEEETTEEEECHHHHTT------CSCEEEEESCSBSSSCCTTCEEEEECCEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCcEEEEEEEeeCCEEEEChhhccC------CcceEEEeccceeccCCcceEEEEeeeee
Confidence            689999999999999999998899999999999999999999965      34456677766654  4455678899999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      .||+|.....++|||||+|++++.+++.++|+||+.... .....+.++|||.+......  ....|+...+++++.++|
T Consensus        75 ~~~~y~~~~~~~diAll~l~~~~~~~~~~~pi~l~~~~~-~~~~~~~~~g~g~~~~~~~~--~~~~l~~~~~~~~~~~~C  151 (226)
T d1azza_          75 VHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDV-GVGTVVTPTGWGLPSDSALG--ISDVLRQVDVPIMSNADC  151 (226)
T ss_dssp             ECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSCC-CTTCEEEEEESSCSSTTCSS--SCSBCEECCEEEECHHHH
T ss_pred             eccccccccccchhhhhhcCCccceeecccccccccccc-ccccceeeecccccCCCcCc--cccEeEEEEEEEEeHHHh
Confidence            999999999999999999999999999999999998777 67788999999988765432  256799999999999999


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      +..+.      .....++|... ....+.|                              .||+||||++.    ++|+|
T Consensus       152 ~~~~~------~~~~~~~~~~~-~~~~~~c------------------------------~gdsG~Pl~~~----~~l~G  190 (226)
T d1azza_         152 DAVYG------IVTDGNICIDS-TGGKGTC------------------------------NGDSGGPLNYN----GLTYG  190 (226)
T ss_dssp             HHHHS------CCCTTEEEECC-TTTCBCC------------------------------TTCTTCEEEET----TEEEE
T ss_pred             hhhhC------cccccceeccc-cCCCccc------------------------------cCCcCCCEEEc----CEEEE
Confidence            99886      23455555543 3456778                              99999999985    48999


Q ss_pred             EEEecCCCC-CCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        355 LVSTGIGCA-RPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       355 i~s~g~~c~-~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+|++..|. ..+.|++||||+.|++||++++++
T Consensus       191 i~S~g~~~~~~~~~p~v~t~v~~y~~WI~~~~g~  224 (226)
T d1azza_         191 ITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQTGI  224 (226)
T ss_dssp             EEEEEETTCTTSCCCEEEEESGGGHHHHHHHHCC
T ss_pred             EEEEeCCCCCCCCCCEEEEEHHHhHHHHHHHhCC
Confidence            999998764 567899999999999999999975

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=100.00  E-value=1.3e-43  Score=311.26  Aligned_cols=222  Identities=39%  Similarity=0.661  Sum_probs=187.2

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|+|..++.++|+||||+++||||||||+..    .......+..+...... ......+..++.|
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~~~~~~C~GtLIs~~~VLTaAhC~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~h   75 (224)
T d1gdna_           1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSG----YAQSGFQIRAGSLSRTS-GGITSSLSSVRVH   75 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTT----SCGGGEEEEESCSBSSS-SSEEEEEEEEEEC
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEEeCCEEEECccccee----ccccccceeeccccccC-CcceEEEEEEEee
Confidence            689999999999999999998999999999999999999999976    33445566666554433 3356778889999


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ  275 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~  275 (388)
                      |.|...  .+|||||+|++|+.+++.++|+|++..... ..+..+.+.|||.+......  .+..|+...+++++.++|.
T Consensus        76 ~~~~~~--~~DiAll~L~~~v~~~~~~~~i~~~~~~~~~~~~~~~~~~g~g~~~~~~~~--~~~~l~~~~v~~i~~~~C~  151 (224)
T d1gdna_          76 PSYSGN--NNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSS--TPVNLLKVTVPIVSRATCR  151 (224)
T ss_dssp             TTCBTT--BSCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSC--CCSBCEEEEEEEECHHHHH
T ss_pred             eccccc--cceeEEEeeccccccccccceeeccccccccccceeeeeeccCccccCCCc--CCCEeeeeEEEEeCHHHHh
Confidence            988654  689999999999999999999999977664 66788999999987654332  2667999999999999999


Q ss_pred             hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEE
Q psy13815        276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL  355 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi  355 (388)
                      ..+.    ...+.+.++|+....+..+.|                              .+||||||++   ++|+|+||
T Consensus       152 ~~~~----~~~~~~~~~~~~~~~~~~~~c------------------------------~~dsG~pl~~---~~~~l~GI  194 (224)
T d1gdna_         152 AQYG----TSAITNQMFCAGVSSGGKDSC------------------------------QGDSGGPIVD---SSNTLIGA  194 (224)
T ss_dssp             HHHC----TTTSCTTEEEECCTTCCCBCC------------------------------TTCTTCEEEC---TTCCEEEE
T ss_pred             cccc----cCccccceeeeecCCCCcccc------------------------------ccccCCceEe---cCCEEEEE
Confidence            9876    335677888888877778888                              9999999995   34689999


Q ss_pred             EEecCCCCCCCCCeEEEeCCCchhHHhhh
Q psy13815        356 VSTGIGCARPRLPGLYTRLTRYIGWISDT  384 (388)
Q Consensus       356 ~s~g~~c~~~~~p~v~t~V~~~~~WI~~~  384 (388)
                      +|+|..|..++.|+|||||++|++||+..
T Consensus       195 ~S~g~~c~~~~~p~vyt~v~~y~~WIe~~  223 (224)
T d1gdna_         195 VSWGNGCARPNYSGVYASVGALRSFIDTY  223 (224)
T ss_dssp             EEECSSSSCTTCCEEEEETTTTHHHHHHH
T ss_pred             EEeCCCCCCCCCCEEEEEHHHHHHHHHHC
Confidence            99999999889999999999999999863

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-44  Score=318.68  Aligned_cols=236  Identities=33%  Similarity=0.571  Sum_probs=192.8

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||++|.+++|||+|.|+..+.++|+||||+++||||||||+..   ......+.+.++.....  ........+..++
T Consensus         1 iigG~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTAAhCv~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   77 (254)
T d2bz6h1           1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDK---IKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVI   77 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGGTT---CSCGGGEEEEESCCBTTCCCSCCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEeCCCEEEECcccccC---CCCcccceeeccceeeccccccceeeeeeeee
Confidence            689999999999999999998899999999999999999999977   23455667777766654  3344567788999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC----CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD----YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~----~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      .|+.|......+|||||||++|+.+++.++|+|||.....    .....+.+.|||.+......   ....+.....+..
T Consensus        78 ~~~~~~~~~~~~DiAll~L~~~v~~~~~i~picl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  154 (254)
T d2bz6h1          78 IPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGAT---ALELMVLNVPRLM  154 (254)
T ss_dssp             EETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCB---CSBCEEEEEEEEC
T ss_pred             ecccccccccccceeEEEecCcccccceEeeeecCccccccccccCCceEEEeccCccCCCCcc---cccceeeeecccc
Confidence            9999999999999999999999999999999999964321    45677899999998766543   4445555555655


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      ...|................++|+....+....|                              .||+||||++..+++|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~gdsGgPl~~~~~~~~  204 (254)
T d2bz6h1         155 TQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSC------------------------------KGDSGGPHATHYRGTW  204 (254)
T ss_dssp             HHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCC------------------------------GGGTTCEEEEEETTEE
T ss_pred             hhhhhhhhhcccccccccccceeeeccCCCcccc------------------------------cCccccceEEccCCeE
Confidence            5554444333333445667778887777777888                              9999999999999999


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      +|+||+||+..|+..+.|++||||+.|++||+++|+.+
T Consensus       205 ~lvGi~S~g~~c~~~~~p~vytrv~~~~~WI~~~i~~~  242 (254)
T d2bz6h1         205 YLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE  242 (254)
T ss_dssp             EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHTSC
T ss_pred             EEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHhhC
Confidence            99999999999998899999999999999999999754

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-43  Score=309.85  Aligned_cols=217  Identities=31%  Similarity=0.596  Sum_probs=187.6

Q ss_pred             EecceecCCCCcceEEEEccC---CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~---~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~  191 (388)
                      |+||+++.+++|||+|.|+..   +.++|+||||+++||||||||+.+        ...|.+|.....  ........|.
T Consensus         1 IvgG~~a~~~e~Pw~v~i~~~~~~~~~~C~GtlI~~~~VLTaAhC~~~--------~~~v~~g~~~~~~~~~~~~~~~v~   72 (224)
T d1t32a1           1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGS--------NINVTLGAHNIQRRENTQQHITAR   72 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEESSSTTSCEEEEEEEETTEEEECGGGCCS--------CEEEEESCSBTTSCCTTCEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEcCCCCEEEEEEEEcCCEEEEeEEcccc--------cccceeeeeeeeccccceeeecce
Confidence            689999999999999999643   367999999999999999999854        456788776654  3345567899


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.||+|......+||||++|..++.+.+.++|+|||..... .....+...|||.......    ...++++.+.+++
T Consensus        73 ~i~~~~~~~~~~~~~diaL~~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~g~~~~~~~----~~~l~~~~~~~~~  148 (224)
T d1t32a1          73 RAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRG----TDTLREVQLRVQR  148 (224)
T ss_dssp             EEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSSSCC----CSBCEEEEEEBCC
T ss_pred             eEEEeecccccccccceeEEeeccccccCcccCccccccccccCCCCCEEEEecccccccCCC----cceeeeeeeeecC
Confidence            9999999999999999999999999999999999999988775 5677889999997765433    6679999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|.+.+..     ...++++|+....+..+.|                              .||+||||++..    
T Consensus       149 ~~~C~~~~~~-----~~~~~~~c~~~~~~~~~~c------------------------------~gdsGgPl~~~~----  189 (224)
T d1t32a1         149 DRQCLRIFGS-----YDPRRQICVGDRRERKAAF------------------------------KGDSGGPLLCNN----  189 (224)
T ss_dssp             HHHHHHHSTT-----CCTTTEEEECCTTSSCBCC------------------------------TTCTTCEEEETT----
T ss_pred             HHHHHhhcCc-----ccccccceeeccccccccc------------------------------ccCcCCeEEEcC----
Confidence            9999998762     4678999998877778888                              999999999853    


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +|+||+|+|..|..  .|.+||||+.|++||+++|+
T Consensus       190 ~l~Gi~S~g~~~~~--~p~vyt~v~~y~~WI~~~i~  223 (224)
T d1t32a1         190 VAHGIVSYGKSSGV--PPEVFTRVSSFLPWIRTTMR  223 (224)
T ss_dssp             EEEEEEEECCTTCC--SCEEEEEGGGSHHHHHHHHC
T ss_pred             EEEEEEEEcCCCCC--CCcEEEEHHHhHHHHHHHHc
Confidence            89999999998874  49999999999999999986

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-43  Score=312.27  Aligned_cols=222  Identities=33%  Similarity=0.670  Sum_probs=189.1

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++++++|||+|+|...+.++|+||||+++||||||||+.+        ...++++.....  ....+.+.+.+++
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~~~~~~C~GtLIs~~~VLTaAhCv~~--------~~~v~~~~~~~~~~~~~~~~~~~~~~~   72 (237)
T d1ao5a_           1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYVD--------QYEVWLGKNKLFQEEPSAQHRLVSKSF   72 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECTTCCCS--------SCEEEESCCBSSSCCSSCEECCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCcEEEEEEEeeCCEEEECHHHcCC--------CceEEEEeccccccccccEEEEEEEEe
Confidence            689999999999999999998899999999999999999999965        235777766554  4455678899999


Q ss_pred             ECCCCCCC-----------CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceE
Q psy13815        195 FHPSHSCS-----------SFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK  263 (388)
Q Consensus       195 ~hp~y~~~-----------~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~  263 (388)
                      .||.|+..           ...+|||||||++++.+++.++|+|||.... .....++++|||........  .+..+..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~DiAll~L~~~i~~~~~~~~i~lp~~~~-~~~~~~~~~g~~~~~~~~~~--~~~~~~~  149 (237)
T d1ao5a_          73 PHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEP-KPGSKCLASGWGSITPTRWQ--KPDDLQC  149 (237)
T ss_dssp             ECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCC-CTTCEEEEEESCCSSCC-CC--CCSBCEE
T ss_pred             ecccccccccccccccCccccccceeeeccCcccccccccceeccCCCCC-cccceEEEeeeeeecccccc--CCcccee
Confidence            99998642           3458999999999999999999999998877 66788999999977654332  2667889


Q ss_pred             EEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceE
Q psy13815        264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM  343 (388)
Q Consensus       264 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~  343 (388)
                      ..+..++.+.|...+..     .+.++++|+.........|                              .||+||||+
T Consensus       150 ~~~~~~~~~~c~~~~~~-----~~~~~~~~~~~~~~~~~~c------------------------------~gdsG~pl~  194 (237)
T d1ao5a_         150 VFITLLPNENCAKVYLQ-----KVTDVMLCAGEMGGGKDTC------------------------------RDDSGGPLI  194 (237)
T ss_dssp             EEEEEECHHHHHHHCSS-----CCCTTEEEEECTTCSCBCC------------------------------TTCTTCEEE
T ss_pred             eEEEEEehHHhhhhhcC-----CCCCCeEEEccCCCCCccc------------------------------CCCCCCeeE
Confidence            99999999999987752     5678899998877778889                              999999999


Q ss_pred             EecCCccEEEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        344 LLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       344 ~~~~~~~~l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      ++    ++|+||+|+|. .|+..+.|.+||||+.|++||+++|+.|
T Consensus       195 ~~----~~l~Gi~S~g~~~c~~~~~p~vft~V~~y~~WI~~~i~~n  236 (237)
T d1ao5a_         195 CD----GILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMMKN  236 (237)
T ss_dssp             ET----TEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHHHC
T ss_pred             Ec----cEEEEEEEEecCCCCCCCCCeEEEEHHHHHHHHHHHHHhc
Confidence            85    48999999987 5887889999999999999999999865

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-43  Score=316.01  Aligned_cols=242  Identities=36%  Similarity=0.701  Sum_probs=190.2

Q ss_pred             CCCCCCccCC--CCCeEecceecCCCCcceEEEEccC-CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEecccc
Q psy13815        103 VPCGRSLASR--RTGKIVGGLAANPGEFPWIVSLKRH-GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHD  179 (388)
Q Consensus       103 ~~cg~~~~~~--~~~~i~~g~~~~~~~~Pw~v~i~~~-~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~  179 (388)
                      ..||++...+  ..+||+||.++.+++|||+|+|+.. +.++|+||||+++||||||||+...   ..........+...
T Consensus         2 ~~cg~~~~~~~~~~~ri~gG~~a~~~~~Pw~v~i~~~~~~~~C~GtLIs~~~VLTaAhCv~~~---~~~~~~~~~~~~~~   78 (247)
T d1rjxb_           2 FDCGKPQVEPKKCPGAVVGGCVAYPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKS---PRPSSYKVILGAHQ   78 (247)
T ss_dssp             CSTTCCSSCCCCCCTTSTTCEECCTTSSTTEEEEEETTCCEEEEEEEEETTEEEEEGGGGTTC---SCGGGEEEEESCCB
T ss_pred             CCCCCCCcCCCCCCCeEECCEECCCCCCCcEEEEEECCCCEEEEEEEEeCCEEEeeeEEEEec---cCCccceeeccccc
Confidence            3699865443  4568999999999999999999764 5779999999999999999999762   22333333333322


Q ss_pred             CCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCC
Q psy13815        180 LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRS  258 (388)
Q Consensus       180 ~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~  258 (388)
                      ...    .....+.+.|+.|......+|||||+|++++.+++.+.|+||+..... .....+...||+.......    .
T Consensus        79 ~~~----~~~~~~~~~~~~~~~~~~~~DiAl~~L~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~----~  150 (247)
T d1rjxb_          79 EVN----LEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFG----A  150 (247)
T ss_dssp             SSS----CCTTCEEEEEEEEEECSSSCCEEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCC----CC----C
T ss_pred             ccc----ccceeeEEeeccccCCCccchhhhhhhhcccccccccccccccccccccCCCceeeecccccccCCCC----C
Confidence            221    122334555666655667899999999999999999999999876654 5556677888887654332    6


Q ss_pred             ccceEEEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcC
Q psy13815        259 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS  338 (388)
Q Consensus       259 ~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gds  338 (388)
                      ..++...+.+++.++|......   .......++|++...+..+.|                              .||+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~c~~~~~~~~~~c------------------------------~gds  197 (247)
T d1rjxb_         151 GLLMEAQLPVIENKVCNRYEFL---NGRVQSTELCAGHLAGGTDSC------------------------------QGDS  197 (247)
T ss_dssp             SBCEEEEEEEECHHHHTSTTTT---TTCSCTTEEEESCSSSCCCBC------------------------------CSCT
T ss_pred             CcceEEEEEEEchHHhhhhhcc---CcccccceeEEeccCCCcccc------------------------------cCCc
Confidence            7889999999999999876552   335678899998877778888                              9999


Q ss_pred             CCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        339 GGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       339 GgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      ||||++..+++|+|+||+|++..|...+.|.+||+|++|++||+++|+.|
T Consensus       198 G~pl~~~~~~~~~l~Gi~S~~~~c~~~~~p~v~t~v~~~~~WI~~~i~~~  247 (247)
T d1rjxb_         198 GGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRNN  247 (247)
T ss_dssp             TCEEEEECSSSEEEEEEECTTSCCBBTTBCEEEEEGGGGHHHHHHHHHHC
T ss_pred             cceEEEeeCCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHhcC
Confidence            99999999999999999999999988889999999999999999999876

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-44  Score=319.07  Aligned_cols=221  Identities=32%  Similarity=0.566  Sum_probs=186.4

Q ss_pred             EecceecCCCCcceEEEEcc---CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKR---HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~---~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~  191 (388)
                      |+||++|.+++|||+|+|..   .+.++|+||||+++||||||||+..        ...|.+|.....  ....+.+.|.
T Consensus         1 iigG~~a~~~~~Pw~v~l~~~~~~~~~~C~GtLIs~~~VLTaAhC~~~--------~~~v~~g~~~~~~~~~~~~~~~v~   72 (227)
T d1fq3a_           1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVLTAAHCWGS--------SINVTLGAHNIKEQEPTQQFIPVK   72 (227)
T ss_dssp             CBTCBCCCTTSCTTEEECCEEETTEEECCEEEEEETTEEEECGGGCCS--------EEEEEESCSBTTTTCTTCEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEcCCCcEEEEEEEEeCCEEEeCEeeccc--------cccceeccccccccccccEEEEEE
Confidence            68999999999999999864   2367899999999999999999954        356777776654  4455678999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      +++.||.|+.....||||||+|++|+.|++.++|+|||..... ..+..+.+.|||.+......   ...+++..+.+++
T Consensus        73 ~i~~~~~~~~~~~~~DiAll~L~~~i~~~~~v~~~~l~~~~~~~~~~~~~~~~G~~~~~~~~~~---~~~l~~~~~~~~~  149 (227)
T d1fq3a_          73 RPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKH---SHTLQEVKMTVQE  149 (227)
T ss_dssp             EECCCTTCCTTTTTTCCEEEEESSCCCCCSSCCCCCCCCSSCCCCTTCEEECCCSCCSTTTSCC---CSBCCBCEEECCC
T ss_pred             EEEecccCCCCCCCcchhhhhcccccccceeEEEEeecccccccCCCCEEEEEeeccccCcccc---cccceEEEEEEEc
Confidence            9999999999999999999999999999999999999986665 56778999999988765443   6789999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|+..+..    ......+.|..........|                              .||+||||++.    +
T Consensus       150 ~~~C~~~~~~----~~~~~~~~~~~~~~~~~~~~------------------------------~gdsG~pl~~~----~  191 (227)
T d1fq3a_         150 DRKCESDLRH----YYDSTIELCVGDPEIKKTSF------------------------------KGDSGGPLVCN----K  191 (227)
T ss_dssp             HHHHTTTCTT----TCCTTTEECCSCTTSSCBCC------------------------------TTCTTCBCBSS----S
T ss_pred             HHHhhhhhcc----cccccceeeeeccccccccc------------------------------cCCCCceEEEe----C
Confidence            9999887762    23445566666555667777                              99999999985    4


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      +|+||+|+|..|..  .|.+||||++|++||+++|+.|
T Consensus       192 ~l~GI~s~g~~~~~--~p~vyt~v~~y~~WI~~~i~~~  227 (227)
T d1fq3a_         192 VAQGIVSYGRNNGM--PPRACTKVSSFVHWIKKTMKRY  227 (227)
T ss_dssp             SCCCEECCCCTTSC--SCCCEECHHHHHHHHHHHTTCC
T ss_pred             EEEEEEEEcCCCCC--CCcEEEEHHHHHHHHHHHHHhC
Confidence            79999999998864  5899999999999999999987

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.1e-43  Score=307.51  Aligned_cols=218  Identities=35%  Similarity=0.629  Sum_probs=182.9

Q ss_pred             EecceecCCCCcceEEEEccC---CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVL  191 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~---~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~  191 (388)
                      |+||.++.+++|||+|.|...   ..++|+||||+++||||||||+..        ...+.++.....  ....+.+.|.
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~~~~~~C~GtLIs~~~VLTaAhC~~~--------~~~~~~~~~~~~~~~~~~~~~~V~   72 (224)
T d1eufa_           1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGS--------SINVTLGAHNIMERERTQQVIPVR   72 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESSSSEEEEEEEEEETTEEEECGGGCCE--------EEEEEESCSBTTSCCTTCEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEcCCCcEEEEEEEEcCCEEEeeceeccc--------ccceeeeeeeecccCCCcEEEEEE
Confidence            689999999999999999642   357899999999999999999864        234555554443  4456789999


Q ss_pred             EEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeec
Q psy13815        192 RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVS  270 (388)
Q Consensus       192 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~  270 (388)
                      ++++||+|+.....||||||+|++|+.|++.+.|+|++..... ..+..+.+.|||.+......   ...++...+.+++
T Consensus        73 ~i~~hp~~~~~~~~~DiAll~L~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~---~~~~~~~~~~~~~  149 (224)
T d1eufa_          73 RPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPS---TDKLQEVDLEVQS  149 (224)
T ss_dssp             EEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCB---CSBCEEEEEEBCC
T ss_pred             EEEECCccccccccccceeeeccceeEEeeeEeeeeeecccccccCCceEEEecccceeccccc---cccceeeeeccCC
Confidence            9999999999999999999999999999999999999987765 66778999999998876554   6778999999999


Q ss_pred             hhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCcc
Q psy13815        271 NQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST  350 (388)
Q Consensus       271 ~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~  350 (388)
                      .++|...+..     .....+.|..........|                              .+|+||||+++    +
T Consensus       150 ~~~C~~~~~~-----~~~~~~~~~~~~~~~~~~c------------------------------~~dsGgpl~~~----~  190 (224)
T d1eufa_         150 EEKCIARFKN-----YIPFTQICAGDPSKRKNSF------------------------------SGDSGGPLVCN----G  190 (224)
T ss_dssp             THHHHTTCTT-----CCTTTEEEESCTTSCCBCC------------------------------TTCTTCEEEET----T
T ss_pred             HHHHHHHhcc-----ccccceeeeeccccccccc------------------------------cCCCCCeEEEc----C
Confidence            9999887652     3445566665555566778                              99999999985    4


Q ss_pred             EEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       351 ~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      +|+||+|+|.+|.  +.|.+||||++|++||+++||
T Consensus       191 ~l~Gi~s~g~~~~--~~p~vft~V~~y~~WI~~~ik  224 (224)
T d1eufa_         191 VAQGIVSYGRNDG--TTPDVYTRISSFLSWIHSTMR  224 (224)
T ss_dssp             EEEEEEEECCTTC--CSCEEEEEGGGTHHHHHHHTC
T ss_pred             EEEEEEEEcCCCC--CCCeEEEEHHHHHHHHHHHhC
Confidence            8999999998885  579999999999999999986

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=100.00  E-value=2.6e-43  Score=309.48  Aligned_cols=217  Identities=29%  Similarity=0.500  Sum_probs=186.9

Q ss_pred             EecceecCCCCcceEEEEccC----CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH----GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~----~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v  190 (388)
                      |+||.+|.+++|||+|+|...    ..++|+||||+++||||||||+..        .+.|.+|.....  ....+...|
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaA~C~~~--------~~~v~~g~~~~~~~~~~~~~~~v   72 (224)
T d3rp2a_           1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGR--------EITVILGAHDVRKRESTQQKIKV   72 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCCS--------EEEEEESCSBTTSCCTTCEEEEE
T ss_pred             CCCCEECcCCCCCCEEEEEEEeCCCCeEEEEEEEEcCCeeEeccccccc--------ccEEEeccccccCccccceeeeE
Confidence            689999999999999999642    357899999999999999999843        567888876654  445567889


Q ss_pred             EEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       191 ~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      .++++||+|+.....+|||||+|++|+.|++.++|+|||..... ..+..+.+.||+........   ...|+++.++++
T Consensus        73 ~~~~~~~~~~~~~~~~diall~L~~~v~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~~~  149 (224)
T d3rp2a_          73 EKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPT---SYTLREVELRIM  149 (224)
T ss_dssp             EEEEECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEE---CSBCEEEEEEEE
T ss_pred             EEEEecccccccccccceeeeeecceeEeccccceEEecccccccCCCcEEEEeeeeeeecCCCc---cceeeEEEEEcc
Confidence            99999999999999999999999999999999999999987654 56788999999988776443   567999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|...+.      .....++|+.........|                              .+|+||||++.    
T Consensus       150 ~~~~C~~~~~------~~~~~~~~~~~~~~~~~~c------------------------------~~d~G~Pl~~~----  189 (224)
T d3rp2a_         150 DEKACVDYRY------YEYKFQVCVGSPTTLRAAF------------------------------MGDSGGPLLCA----  189 (224)
T ss_dssp             CGGGTTTTTC------CCTTTEEEECCTTSCCBCC------------------------------TTTTTCEEEET----
T ss_pred             CHHHhhhccc------ccccceeeeccCcccccCc------------------------------CCCcCCeEEEc----
Confidence            9999987665      4567889988777777888                              99999999994    


Q ss_pred             cEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       350 ~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ++|+||+|+|..|.  +.|.+||||++|.+||+++|+
T Consensus       190 ~~l~Gi~S~g~~~~--~~p~vyt~v~~~~~WI~~vi~  224 (224)
T d3rp2a_         190 GVAHGIVSYGHPDA--KPPAIFTRVSTYVPWINAVIN  224 (224)
T ss_dssp             TEEEEEEEECCTTC--CSCEEEEEHHHHHHHHHHHHC
T ss_pred             CEEEEEEEECCCCC--CCCeEEEEHHHHHHHHHHHhC
Confidence            58999999998775  569999999999999999884

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-43  Score=306.54  Aligned_cols=224  Identities=32%  Similarity=0.615  Sum_probs=186.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|.|...+.++|+||||+++||||||||+.+    .....+.+..+.....  ....+...|.+++
T Consensus         1 I~gG~~~~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~v~~~~~~~~~~~~~~~~~~v~~i~   76 (228)
T d1bioa_           1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLED----AADGKVQVLLGAHSLSQPEPSKRLYDVLRAV   76 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGGGG----CSSSCEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCcEEEEEEEEeCCEEEECceeeec----cccceeeeeccccccccCCcceeeccceeee
Confidence            689999999999999999999999999999999999999999987    2334455655554432  4455678999999


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      .||.|+....++|||||+|++++.+++.+.|+|||..... ..+..+.+.|||.+......   +..++...+++++.++
T Consensus        77 ~~~~y~~~~~~~diAll~l~~~~~~~~~v~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~~~~~~~  153 (228)
T d1bioa_          77 PHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRR---PDSLQHVLLPVLDRAT  153 (228)
T ss_dssp             ECTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTCEEEEEESSCCSTTCCC---CSBCEEEEEEEECHHH
T ss_pred             eeecccCCCcccceehhhccccceeeeEEeeecccccccccccCceEEEecceeecCCCCC---CCcceEEEEEEeCHHH
Confidence            9999999999999999999999999999999999986665 56778899999988776554   7789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |...+..    ........|+.. ....+.|                              .||+|+||++.    ++|+
T Consensus       154 ~~~~~~~----~~~~~~~~~~~~-~~~~~~~------------------------------~gdsG~Pl~~~----~~Lv  194 (228)
T d1bioa_         154 CNRRTHH----DGAITERLMCAE-SNRRDSC------------------------------KGDSGGPLVCG----GVLE  194 (228)
T ss_dssp             HHSTTTT----TTCCCTTEEEEC-CSSCBCC------------------------------TTTTTCEEEET----TEEE
T ss_pred             Hhhhhcc----cccccccceeec-ccCCCcc------------------------------cCCcCccEEEc----CEEE
Confidence            9876652    233445555543 3456777                              99999999984    5899


Q ss_pred             EEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        354 GLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       354 Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ||+|++. .|+..+.|.+||||+.|++||+++|.
T Consensus       195 Gi~S~g~~~c~~~~~p~v~t~v~~~~~WI~~~i~  228 (228)
T d1bioa_         195 GVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVLA  228 (228)
T ss_dssp             EEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHHC
T ss_pred             EEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHhC
Confidence            9999986 58878899999999999999999873

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-43  Score=315.33  Aligned_cols=229  Identities=29%  Similarity=0.564  Sum_probs=179.5

Q ss_pred             CCCeEecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC---CCceeeec
Q psy13815        113 RTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS---RPSISTVP  189 (388)
Q Consensus       113 ~~~~i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~  189 (388)
                      ...||+||.++.+++|||+|.|.   .++|+||||+++||||||||+.+.      ....+++|..+..   ....+.+.
T Consensus        10 ~~~ri~gG~~~~~~~~Pw~v~l~---~~~C~GtLIs~~~VLTaAhCv~~~------~~~~v~~g~~~~~~~~~~~~~~~~   80 (259)
T d1elva1          10 EKQRIIGGSDADIKNFPWQVFFD---NPWAGGALINEYWVLTAAHVVEGN------REPTMYVGSTSVQTSRLAKSKMLT   80 (259)
T ss_dssp             ----CBTCEECCGGGSTTEEEEE---TTEEEEEEEETTEEEECHHHHTTC------SSCCEECSCSBCC-------CEEC
T ss_pred             CCCceECCEECCCCCcceEEEeC---CceEEEEEEeCCEEEecccccccc------cceeEEeeeeeeeccccccccccc
Confidence            56789999999999999999995   458999999999999999999762      2335666665543   23456789


Q ss_pred             eEEEEECCCCC-------CCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC---CCCCeEEEEEccccCCCCCCCCCCc
Q psy13815        190 VLRIMFHPSHS-------CSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD---YSEQSVTVAGWGWTNENPSQGRRSN  259 (388)
Q Consensus       190 v~~i~~hp~y~-------~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~---~~~~~~~~~GwG~~~~~~~~~~~~~  259 (388)
                      |.++++||.|.       .....||||||||++|+.+++.++|+|++.....   ..+..+.+.||+.+.....    ..
T Consensus        81 v~~i~~hp~~~~~~~~~~~~~~~~DIAllkL~~~~~~~~~v~pic~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~  156 (259)
T d1elva1          81 PEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDR----AV  156 (259)
T ss_dssp             EEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSS----CS
T ss_pred             ceeEeecceeecccccccCCCcccceeeeecccceehhcccCceeeccCccccccccceEEEEecccccccccc----cc
Confidence            99999999995       3456789999999999999999999999876543   5677889999998766543    55


Q ss_pred             cceEEEEEeechhhhhhHhhcCC----CccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCC
Q psy13815        260 ILQKVALSVVSNQVCQAWYQSEG----KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ  335 (388)
Q Consensus       260 ~l~~~~~~i~~~~~C~~~~~~~~----~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (388)
                      .++...+.+++...|...+....    ....+...++|++.. ...+.|                              .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~c------------------------------~  205 (259)
T d1elva1         157 RLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGE-KGMDSC------------------------------K  205 (259)
T ss_dssp             BCEEEEEEEECHHHHHTC----------CCCCCTTEEEEECS-TTCBCC------------------------------T
T ss_pred             ccccceeeEechhhceeeeecccccccccceeecceeeccCC-CCCccC------------------------------C
Confidence            78899999999999977554221    122357788888764 456788                              9


Q ss_pred             CcCCCceEEec---CCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        336 ADSGGPLMLLG---AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       336 gdsGgPL~~~~---~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      ||+||||++..   .++|+|+||+|++.+|+   .|.+||||+.|.+||+++|+.|
T Consensus       206 gDsGgPl~~~~~~~~~~~~l~Gi~S~~~~c~---~p~vft~V~~~~~WI~~~i~~~  258 (259)
T d1elva1         206 GDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG---TYGLYTRVKNYVDWIMKTMQEN  258 (259)
T ss_dssp             TCTTCEEEEECSSCTTCEEEEEEEEECSSTT---SEEEEEEGGGGHHHHHHHHHHT
T ss_pred             CCcCCeEEEEecCCCcEEEEEEEEEeCCCCC---CceEEeEHHHHHHHHHHHHHhc
Confidence            99999999875   35899999999999985   4799999999999999999876

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.7e-42  Score=307.17  Aligned_cols=229  Identities=34%  Similarity=0.635  Sum_probs=187.0

Q ss_pred             EecceecCCCCcceEEEEccCC----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccc--cCCCCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH--DLSRPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~--~~~~~~~~~~~v  190 (388)
                      |+||.++++++|||+|.|....    .++|+||||+++||||||||+..      .....+.++..  .......+.+.|
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~------~~~~~v~~~~~~~~~~~~~~~~~~v   74 (241)
T d1brup_           1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS------SRTYRVVLGRHSLSTNEPGSLAVKV   74 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT------TSCEEEEESCSBSSSCCTTCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEcCCCcceEEeEEEEEeCCEEEECeEeeec------ccccceeeeccceeccCCCccccce
Confidence            6899999999999999997432    46899999999999999999976      22334444433  333445667889


Q ss_pred             EEEEECCCCCCCCC--CCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEE
Q psy13815        191 LRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALS  267 (388)
Q Consensus       191 ~~i~~hp~y~~~~~--~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~  267 (388)
                      .++++||+|+....  ++|||||+|+.++.++..++|+|++..... ..+..+.+.|||........   +..++...+.
T Consensus        75 ~~~~~~~~~~~~~~~~d~~iall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~g~~~~~~~~---~~~~~~~~~~  151 (241)
T d1brup_          75 SKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGAS---PDILQQGQLL  151 (241)
T ss_dssp             EEEEECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCC---CSBCEEEEEE
T ss_pred             eeeEEEeeeeeccccCCceEEEEecccccccccceeeeeeccccccCCCceeEEEEeeeccCCCCcC---CCcceEEEEE
Confidence            99999999977554  467999999999999999999999987764 57888999999988765543   6789999999


Q ss_pred             eechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEe-c
Q psy13815        268 VVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL-G  346 (388)
Q Consensus       268 i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~-~  346 (388)
                      +++.++|.+...   ........++|+.. .+..+.|                              .||+||||++. .
T Consensus       152 ~~~~~~C~~~~~---~~~~~~~~~~~~~~-~~~~~~C------------------------------~gdsGgPl~~~~~  197 (241)
T d1brup_         152 VVDYATCSKPGW---WGSTVKTNMICAGG-DGIISSC------------------------------NGDSGGPLNCQGA  197 (241)
T ss_dssp             EECHHHHTSTTT---TGGGCCTTEEEECC-SSSSBCC------------------------------TTCTTCEEEEECT
T ss_pred             EeCHHHhCcccc---ccccccccceeecC-CCCcccc------------------------------CCCcccceEEEcC
Confidence            999999987654   22345667777765 4556788                              99999999987 5


Q ss_pred             CCccEEEEEEEecCC--CCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        347 AESTQVIGLVSTGIG--CARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       347 ~~~~~l~Gi~s~g~~--c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      +++|+|+||+|+|..  |...+.|++||||+.|++||+++|+.|
T Consensus       198 ~~~~~L~Gi~S~g~~~~c~~~~~p~vyt~v~~~~~WI~~~i~~~  241 (241)
T d1brup_         198 NGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIANN  241 (241)
T ss_dssp             TSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHHHC
T ss_pred             CCCEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHhcC
Confidence            679999999999874  677789999999999999999999876

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-42  Score=303.26  Aligned_cols=216  Identities=31%  Similarity=0.543  Sum_probs=183.4

Q ss_pred             cceecCCCCcceEEEEccC----CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEE
Q psy13815        119 GGLAANPGEFPWIVSLKRH----GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLR  192 (388)
Q Consensus       119 ~g~~~~~~~~Pw~v~i~~~----~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~  192 (388)
                      ||++|.+++|||+|+|+..    ..++|+|+||+++||||||||+..        .+.|++|..+..  ....+...+.+
T Consensus         1 GG~~a~~~e~Pw~v~i~~~~~~~~~~~C~G~LIs~~~VLTaAhCv~~--------~~~v~~g~~~~~~~~~~~~~~~~~~   72 (224)
T d1nn6a_           1 GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGR--------SITVTLGAHNITEEEDTWQKLEVIK   72 (224)
T ss_dssp             CCEECCTTSSTTEEEEEEECTTSCEEEEEEEEEETTEEEECGGGCCS--------EEEEEESCSBTTSCCTTCEEEEEEE
T ss_pred             CCcCCcCCCCCCEEEEEEEeCCCCceEEEEEEEeCCEEEehhhcccc--------cceEEecccccccccccccceeEEE
Confidence            7999999999999999642    357899999999999999999954        467899988776  33456788999


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeech
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN  271 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~  271 (388)
                      ++.||.|+.....+|||||+|.+|+.++..++|+|++..... ..+..+...||+........   +..++...+.+++.
T Consensus        73 ~~~~p~~~~~~~~~diall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~  149 (224)
T d1nn6a_          73 QFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPG---SDTLQEVKLRLMDP  149 (224)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCSCCCCCCTTCEEEEEECCCCSSSCCC---CSBCEEEEEEBCCG
T ss_pred             EEEeecccccccccchhhhcccCCcccccccccccccccccccCCCceeeeccccccccCCCc---cccceEEEEEecCH
Confidence            999999999999999999999999999999999999987665 56788999999987665443   67899999999999


Q ss_pred             hhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       272 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      ++|+..+.      ......+|+.......+.|                              .||+||||++.    |+
T Consensus       150 ~~C~~~~~------~~~~~~~~~~~~~~~~~~c------------------------------~gDsG~PL~~~----~~  189 (224)
T d1nn6a_         150 QACSHFRD------FDHNLQLCVGNPRKTKSAF------------------------------KGDSGGPLLCA----GV  189 (224)
T ss_dssp             GGGTTSTT------CCTTTEEEECCTTTC--CC------------------------------CCCTTCEEEET----TE
T ss_pred             HHHhhhcc------cccceeeeccCcccccccc------------------------------CCCccceEEEC----CE
Confidence            99987665      3466788877666666778                              99999999985    48


Q ss_pred             EEEEEEecCCCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       352 l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      |+||+|++..|.  +.|.+||||+.|++||+++|+.
T Consensus       190 l~GI~s~g~~~~--~~p~vyt~v~~y~~WI~~~i~~  223 (224)
T d1nn6a_         190 AQGIVSYGRSDA--KPPAVFTRISHYRPWINQILQA  223 (224)
T ss_dssp             EEEEEEECCTTC--CSCEEEEEHHHHHHHHHHHHHT
T ss_pred             EEEEEEECCCCC--CCCeEEEEHHHHHHHHHHHHhc
Confidence            999999998765  4699999999999999999975

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=100.00  E-value=2.4e-42  Score=305.32  Aligned_cols=220  Identities=33%  Similarity=0.636  Sum_probs=178.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccC--CCCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDL--SRPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~--~~~~~~~~~v~~i~  194 (388)
                      |+||++|++++|||+|.|..  .++|+||||+++||||||||+.+.      .  .+.+.....  .........+.++.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~--~~~C~GtLIs~~~VLTaAhCv~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~   70 (235)
T d1tona_           1 IVGGYKCEKNSQPWQVAVIN--EYLCGGVLIDPSWVITAAHCYSNN------Y--QVLLGRNNLFKDEPFAQRRLVRQSF   70 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEES--SSEEEEEEEETTEEEECGGGCCSC------C--EEEESCSBTTSCCTTCEEECEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEcC--CeEEEEEEecCCEEEECceecCCC------C--ceEEeeeeeecCCCceeEeeeeeee
Confidence            68999999999999999984  579999999999999999999761      1  223322222  22333445566666


Q ss_pred             ECCCCC-----------CCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceE
Q psy13815        195 FHPSHS-----------CSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK  263 (388)
Q Consensus       195 ~hp~y~-----------~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~  263 (388)
                      .|+.|.           .....+|||||+|++++.+++.+.|+||+.... .....+.+.|||.+......  ....|+.
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~Diall~L~~~v~~~~~i~~i~l~~~~~-~~~~~~~~~g~g~~~~~~~~--~~~~l~~  147 (235)
T d1tona_          71 RHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEP-KVGSTCLASGWGSTNPSEMV--VSHDLQC  147 (235)
T ss_dssp             ECTTCCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCC-CTTCEEEEEESSCSSSSSCC--CCSBCEE
T ss_pred             eeeeceeeeeeecccccccccccceeEEEecCccccCCcccccccccccc-cccceeEEEEcccccccccc--cccccee
Confidence            666653           345678999999999999999999999998776 56778899999987665432  2567999


Q ss_pred             EEEEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceE
Q psy13815        264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM  343 (388)
Q Consensus       264 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~  343 (388)
                      ..+++++.++|+..+..     ...+.++|+....+..+.|                              .||+||||+
T Consensus       148 ~~~~~~~~~~C~~~~~~-----~~~~~~~c~~~~~~~~~~c------------------------------~gdsG~Pl~  192 (235)
T d1tona_         148 VNIHLLSNEKCIETYKD-----NVTDVMLCAGEMEGGKDTC------------------------------AGDSGGPLI  192 (235)
T ss_dssp             EEEEEECGGGCGGGGST-----TGGGGEEEEECTTCSCBCC------------------------------TTCTTCEEE
T ss_pred             eeeeeeCHHHHHHHhCC-----CCCCCceEeCcCCCCcccc------------------------------CCCcCCeEE
Confidence            99999999999988762     4567899998877788889                              999999999


Q ss_pred             EecCCccEEEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        344 LLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       344 ~~~~~~~~l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      ++    ++|+||+|++. .|...+.|.+||||++|++||+++|+.|
T Consensus       193 ~~----~~l~Gi~S~g~~~c~~~~~p~vyt~v~~y~~WI~~~i~~~  234 (235)
T d1tona_         193 CD----GVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKEN  234 (235)
T ss_dssp             ET----TEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHHHC
T ss_pred             Ec----CEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHHHC
Confidence            84    58999999987 6877788999999999999999999865

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=100.00  E-value=5.3e-42  Score=303.03  Aligned_cols=225  Identities=30%  Similarity=0.577  Sum_probs=183.3

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC-CCceeeeceEEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS-RPSISTVPVLRIMF  195 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~-~~~~~~~~v~~i~~  195 (388)
                      |+||.++.+++|||+|.|+..+.++|+|+||+++||||||||+..      .....+.+...... ........+...+.
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~~~C~G~LIs~~~VLTaAhCv~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (234)
T d1op0a_           1 VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHCDST------DFQMQLGVHSKKVLNEDEQTRNPKEKFIC   74 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS------SCEEEESCSCSSSCCTTCEEECEEEEEEC
T ss_pred             CCCCEECCCCCcCcEEEEEECCcEEEEEEEEcCCEEEECceeCCC------CCccccceeeccccCCcceeeeeeeeccc
Confidence            689999999999999999998899999999999999999999966      22222333222222 22233345567888


Q ss_pred             CCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhh
Q psy13815        196 HPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ  275 (388)
Q Consensus       196 hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~  275 (388)
                      |+.|+.....+|||||||++|+.|+++++|+|||.... ..+..+.++||+........  ....++...+.+++..+|.
T Consensus        75 ~~~~~~~~~~~DiaLl~L~~~v~~~~~i~picl~~~~~-~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~C~  151 (234)
T d1op0a_          75 PNKNNNEVLDKDIMLIKLDKPISNSKHIAPLSLPSSPP-SVGSVCRIMGWGSITPVKET--FPDVPYCANINLLDHAVCQ  151 (234)
T ss_dssp             TTCCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCSSSSSCC--CCSSCEEEEEEEECHHHHH
T ss_pred             cccccccccchhhhhhhcCCceeccceeecccccccCc-ccceEEEEeeeccccccccc--cccccccccceEechHHhc
Confidence            99999999999999999999999999999999998765 67889999999977654332  3667899999999999999


Q ss_pred             hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEE
Q psy13815        276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL  355 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi  355 (388)
                      ..+..    ......++|.....+..+.|                              .||+|+||++.    ++|+||
T Consensus       152 ~~~~~----~~~~~~~~~~~~~~~~~~~~------------------------------~g~~G~Pl~~~----~~l~Gi  193 (234)
T d1op0a_         152 AGYPE----LLAEYRTLCAGIVQGGKDTC------------------------------GGDSGGPLICN----GQFQGI  193 (234)
T ss_dssp             HHCTT----CCTTSCEEEEECTTCCCBCC------------------------------TTCTTCEEEET----TEEEEE
T ss_pred             ccccC----cceeeeeeeecccccccccc------------------------------cCCCCceEEEc----CEEEEE
Confidence            88762    24455667776666677788                              99999999985    489999


Q ss_pred             EEecC-CCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        356 VSTGI-GCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       356 ~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      +|++. .|+....|.+||||+.|++||+++|+.+
T Consensus       194 ~S~g~~~c~~~~~p~vft~v~~y~~WI~~~i~~~  227 (234)
T d1op0a_         194 VSYGAHPCGQGPKPGIYTNVFDYTDWIQRNIAGN  227 (234)
T ss_dssp             EEECCSSTTCTTSCEEEEESGGGHHHHHHHHHTC
T ss_pred             EEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHhhc
Confidence            99986 6888889999999999999999999653

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-42  Score=302.15  Aligned_cols=215  Identities=30%  Similarity=0.590  Sum_probs=180.9

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC-CCceeeeceEEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS-RPSISTVPVLRIMF  195 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~-~~~~~~~~v~~i~~  195 (388)
                      |+||.++.+++|||+|.|+.++.++|+|+||+++||||||||+.+    .....+.+.++..... ......+.+..++.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~C~G~LIs~~~VLTaAhC~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   76 (218)
T d2z7fe1           1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVAN----VNVRAVRVVLGAHNLSRREPTRQVFAVQRIF   76 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTT----SCGGGCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCeEEEEEEEeCCEEEECeEeccc----ccccceeeeeeeccccccccceeeeeeeeEe
Confidence            689999999999999999999999999999999999999999987    3455667777776554 33445677889999


Q ss_pred             CCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhh
Q psy13815        196 HPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVC  274 (388)
Q Consensus       196 hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C  274 (388)
                      |+.|+.....+|||||+|++|+.+++.++|+|||..... .....+.+.||+........   +..|+...+++.+. .|
T Consensus        77 ~~~~~~~~~~~diall~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~~~~~-~c  152 (218)
T d2z7fe1          77 ENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGI---ASVLQELNVTVVTS-LC  152 (218)
T ss_dssp             ESCCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCB---CSBCEEEEEEEECT-TC
T ss_pred             eeccccccccceEEEeeccccceeeeeeeeeeeccCccccCCCcEEEEeccceeeccccc---ccceeEEEeccccc-cc
Confidence            999999999999999999999999999999999977665 56678899999988766443   67889999888763 45


Q ss_pred             hhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEE
Q psy13815        275 QAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG  354 (388)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~G  354 (388)
                      .             ..+.|+.......+.|                              .||+||||+++    ++|+|
T Consensus       153 ~-------------~~~~~~~~~~~~~~~C------------------------------~gdsG~Pl~~~----~~l~G  185 (218)
T d2z7fe1         153 R-------------RSNVCTLVRGRQAGVC------------------------------FGDSGSPLVCN----GLIHG  185 (218)
T ss_dssp             C-------------TTSEEEECTTSCCBCC------------------------------TTCTTCEEEET----TEEEE
T ss_pred             c-------------eeeeeeeecCcccCcc------------------------------ccccCCCEEEC----CEEEE
Confidence            3             3466776655566778                              99999999985    48999


Q ss_pred             EEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        355 LVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       355 i~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+||+. +|...+.|.+||||++|++||+++|+
T Consensus       186 I~s~~~~~c~~~~~p~vft~v~~~~~WI~~~i~  218 (218)
T d2z7fe1         186 IASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQ  218 (218)
T ss_dssp             EEEEESSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             EEEEecCCCCCCCcCEEEEEhHHhHHHHHHHhC
Confidence            999975 68888889999999999999999985

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-42  Score=300.58  Aligned_cols=215  Identities=28%  Similarity=0.504  Sum_probs=178.0

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeeceEEEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPVLRIM  194 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v~~i~  194 (388)
                      |+||.++.+++|||+|.|+.++.++|+||||+++||||||||+.+    .......+.++.....  ........+..++
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (225)
T d1a7sa_           1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQS----QNPGVSTVVLGAYDLRRRERQSRQTFSISSM   76 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGC--------CCSEEEEESCSSTTSCCTTTCEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCcEEEEEEEEcCCEEEECeeeeee----ccccceeeEEeeeecccccccccceeeeeee
Confidence            689999999999999999999899999999999999999999976    3344556666665543  3344456778899


Q ss_pred             ECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhh
Q psy13815        195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV  273 (388)
Q Consensus       195 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~  273 (388)
                      .|+.|......||||||+|++|+.+.+.++|+||+..... ..+..+.+.|||........   ...++...+.+++.++
T Consensus        77 ~~~~~~~~~~~~DIAll~L~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~~~~~~~  153 (225)
T d1a7sa_          77 SENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRL---SRFPRFVNVTVTPEDQ  153 (225)
T ss_dssp             ECSSCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCC---CSSCEEEEEEECCGGG
T ss_pred             eeeeccccccccccchhhcCCcccccccceeEEeeccccccCCCceeEecccccccccccc---ccceeEEEEEEeehhh
Confidence            9999999999999999999999999999999999876665 56788999999987765543   6789999999999999


Q ss_pred             hhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEE
Q psy13815        274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI  353 (388)
Q Consensus       274 C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~  353 (388)
                      |..             ...|+.......+.|                              .||+||||++.    ++|+
T Consensus       154 C~~-------------~~~~~~~~~~~~~~c------------------------------~gdsG~Pl~~~----~~l~  186 (225)
T d1a7sa_         154 CRP-------------NNVCTGVLTRRGGIC------------------------------NGDGGTPLVCE----GLAH  186 (225)
T ss_dssp             SCT-------------TEEEEECSSSSCBCC------------------------------TTCTTCEEEET----TEEE
T ss_pred             ccc-------------ccceeeecccccccc------------------------------cCCCCCCEEEe----CEEE
Confidence            954             344555555667778                              99999999994    5899


Q ss_pred             EEEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       354 Gi~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      ||+|++..|.. ..|.+||||++|++||+++|+
T Consensus       187 Gi~S~~~~~c~-~~p~v~t~v~~y~~WI~~~i~  218 (225)
T d1a7sa_         187 GVASFSLGPCG-RGPDFFTRVALFRDWIDGVLN  218 (225)
T ss_dssp             EEEEEECSSTT-SSCEEEEEGGGGHHHHHHHHH
T ss_pred             EEEEECCCCCC-CCCCEEEEHHHHHHHHHHHHC
Confidence            99999986543 469999999999999999986

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=4.8e-42  Score=304.00  Aligned_cols=229  Identities=31%  Similarity=0.551  Sum_probs=184.1

Q ss_pred             EecceecCCCCcceEEEEccC--C--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCC--ceeeec-
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH--G--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRP--SISTVP-  189 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~--~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~--~~~~~~-  189 (388)
                      |+||+++.+++|||+|.|...  .  .++|+||||+++||||||||+.+      .....|.+|.......  ...... 
T Consensus         1 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~------~~~~~v~~g~~~~~~~~~~~~~~~~   74 (240)
T d1gvkb_           1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR------ELTFRVVVGEHNLNQNNGTEQYVGV   74 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCS------CCCEEEEESCSBTTSCCSCCEEEEE
T ss_pred             CCCCEECCCCCCCEEEEEEEecCCccceEEEEEEEeCCEEEECcccccc------cCCceEEeeeeeccccccccccccc
Confidence            689999999999999999642  2  45899999999999999999976      2344577776655422  222223 


Q ss_pred             -eEEEEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEE
Q psy13815        190 -VLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALS  267 (388)
Q Consensus       190 -v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~  267 (388)
                       +..++.|+.++.....+|||||+|.+++.+.+.++|+||+..... .........||+........   ...++...++
T Consensus        75 ~~~~~~~~~~~~~~~~~~diAll~l~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~~~~  151 (240)
T d1gvkb_          75 QKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQL---AQTLQQAYLP  151 (240)
T ss_dssp             EEEEECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCB---CSBCEEEECC
T ss_pred             cceeEEEeecccccccCcceeeecccCcccccccccceeeccCccccccccceeEeccccccccccc---cceeeEEEEE
Confidence             333444556666778899999999999999999999999887654 55667888999987765443   6789999999


Q ss_pred             eechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecC
Q psy13815        268 VVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA  347 (388)
Q Consensus       268 i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~  347 (388)
                      +++...|...+.   ......+.++|+... +....|                              .||+||||++..+
T Consensus       152 ~~~~~~~~~~~~---~~~~~~~~~~c~~~~-~~~~~c------------------------------~gDsG~pl~~~~~  197 (240)
T d1gvkb_         152 TVDYAICSSSSY---WGSTVKNSMVCAGGD-GVRSGC------------------------------QGDSGGPLHCLVN  197 (240)
T ss_dssp             EECHHHHTSTTT---TGGGCCTTEEEECCS-SSCBCC------------------------------TTCTTCEEEEEET
T ss_pred             EEcHHHhcceec---cCCccCCceEEecCC-CCCccc------------------------------cCccccceEEEEC
Confidence            999999987665   344678899999764 456778                              9999999999999


Q ss_pred             CccEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        348 ESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       348 ~~~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      ++|+|+||+||+.  +|...+.|+|||||++|++||+++|+.|
T Consensus       198 ~~~~lvGI~S~~~~~~c~~~~~p~vyt~v~~~~~WI~~~i~~n  240 (240)
T d1gvkb_         198 GQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIASN  240 (240)
T ss_dssp             TEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHHHC
T ss_pred             CEEEEEEEEEEcCCCCCCCCCCCEEEEEHHHhHHHHHHHHhcC
Confidence            9999999999987  4667788999999999999999999865

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=100.00  E-value=4.9e-42  Score=302.44  Aligned_cols=221  Identities=33%  Similarity=0.594  Sum_probs=181.2

Q ss_pred             EecceecCCCCcceEEEEcc----CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKR----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLR  192 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~----~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~  192 (388)
                      |+||+++.+++|||+|+|..    .+.++|+||||+++||||||||+..      ...+.+.++...... ..+.+.|.+
T Consensus         1 i~~G~~a~~ge~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhC~~~------~~~~~v~~~~~~~~~-~~~~~~v~~   73 (230)
T d2hlca_           1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD------AVSVVVYLGSAVQYE-GEAVVNSER   73 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTT------EEEEEEEESCSBTTC-CSEEEECSE
T ss_pred             CCCCEECCCCCCCCEEEEEEEecCCCeeEEEEEEEeCCEEEEeeecccc------cccceeecccceecc-cccceeeEe
Confidence            68999999999999999964    4577899999999999999999965      556778888766543 446788999


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC---CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD---YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~---~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      ++.||.|+.....+|||||+|+++ .+.+.++|+||+.....   ..+..+.+.|||.....      ...++...+..+
T Consensus        74 i~~hp~y~~~~~~~DiALl~L~~~-~~~~~v~pi~l~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~  146 (230)
T d2hlca_          74 IISHSMFNPDTYLNDVALIKIPHV-EYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTD------TVILQYTYNLVI  146 (230)
T ss_dssp             EEECTTCBTTTTBTCCEEEECSCC-CCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSC------CCBCEEEEEEEE
T ss_pred             EEeeecccccccccceeEEEeecc-cccccceeEEeeccccccccccceeEEEEeecccccc------chhhheeeeccc
Confidence            999999999999999999999876 56888999999875543   45567788888865443      556899999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|...+.    .....+.++|+.. ....+.|                              .||+||||++.  ++
T Consensus       147 ~~~~c~~~~~----~~~~~~~~~~~~~-~~~~~~~------------------------------~gdsGgp~~~~--~~  189 (230)
T d2hlca_         147 DNDRCAQEYP----PGIIVESTICGDT-SDGKSPC------------------------------FGDSGGPFVLS--DK  189 (230)
T ss_dssp             CHHHHHTTSC----TTSSCTTEEEECC-TTSCBCC------------------------------TTCTTCEEEEG--GG
T ss_pred             cchhhhhccc----cccccccceEecc-ccCcccc------------------------------ccccCCCeEEC--CC
Confidence            9999987665    2245677888754 3456667                              99999999985  47


Q ss_pred             cEEEEEEEecCCC-CCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        350 TQVIGLVSTGIGC-ARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       350 ~~l~Gi~s~g~~c-~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      |+|+||+|++.+| ...+.|.+||+|++|++||+++|+++
T Consensus       190 ~~l~Gi~S~~~~~~~~~~~p~vyt~V~~y~~WI~~~~~~~  229 (230)
T d2hlca_         190 NLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNTGIK  229 (230)
T ss_dssp             TEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHHCCC
T ss_pred             eEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHHhCCC
Confidence            8999999998753 35688999999999999999999875

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-41  Score=297.16  Aligned_cols=215  Identities=31%  Similarity=0.558  Sum_probs=178.0

Q ss_pred             EecceecCCCCcceEEEEccC---CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC-CCceeeeceEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS-RPSISTVPVLR  192 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~---~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~-~~~~~~~~v~~  192 (388)
                      |+||.++.+++|||+|.|+..   ..++|+||||+++||||||||+..    .....+.|.+|..... ....+...+.+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~v~~g~~~~~~~~~~~~~~~~~   76 (221)
T d1fuja_           1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRD----IPQRLVNVVLGAHNVRTQEPTQQHFSVA   76 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTBTTCCCEEEEEEETTEEEECGGGGSS----SCGGGEEEEESCSBTTSCCTTCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCCEEEEEEEEeCCEEEEeeEEEee----cCCccceeeeeccccccccccceeeeee
Confidence            689999999999999999753   357899999999999999999987    4556788888876664 33445678999


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeech
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN  271 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~  271 (388)
                      ++.||.|+.....+|||||+|++++.++++++|+|||..... ..+..+++.||+........   ...++...+.+.+.
T Consensus        77 ~~~~~~~~~~~~~~diAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~~~~~~~~~~---~~~l~~~~~~~~~~  153 (221)
T d1fuja_          77 QVFLNNYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPP---AQVLQELNVTVVTF  153 (221)
T ss_dssp             EEEECCCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCB---CSBCEEEEEEEECT
T ss_pred             eEEEeeecCCCCccEEEEEEccccccccceEEEEEecccccccCCCceEEEeccccccccccc---Cccceeeeeeeeee
Confidence            999999999999999999999999999999999999987764 66778899999987765543   66788888887764


Q ss_pred             hhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccE
Q psy13815        272 QVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ  351 (388)
Q Consensus       272 ~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~  351 (388)
                      ..|              ....|........+.|                              .||+||||++.    ++
T Consensus       154 ~~~--------------~~~~~~~~~~~~~~~c------------------------------~gd~G~pl~~~----~~  185 (221)
T d1fuja_         154 FCR--------------PHNICTFVPRRKAGIC------------------------------FGDSGGPLICD----GI  185 (221)
T ss_dssp             TCC--------------TTEEEEECSSSSCBCC------------------------------TTCTTCEEEET----TE
T ss_pred             ccc--------------cccceeccccCCCcee------------------------------CCccCCCEEEe----CE
Confidence            332              2233333344567778                              99999999985    48


Q ss_pred             EEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        352 VIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       352 l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+||+|++. +|...+.|.+||||++|++||+++|+
T Consensus       186 l~Gi~s~~~~gc~~~~~p~vyt~v~~~~~WI~~~ik  221 (221)
T d1fuja_         186 IQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR  221 (221)
T ss_dssp             EEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             EEEEEEEEECCCCCCCCCeEEEEHHHhHHHHHHHhC
Confidence            999999986 78888899999999999999999986

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=100.00  E-value=2.6e-41  Score=299.47  Aligned_cols=229  Identities=33%  Similarity=0.646  Sum_probs=190.2

Q ss_pred             EecceecCCCCcceEEEEccCC---ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC-CCceeeeceEE
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG---GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS-RPSISTVPVLR  192 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~---~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~-~~~~~~~~v~~  192 (388)
                      |+||+++.+++|||+|.|....   .++|+||||+++||||||||+..    .....+.+..+..+.. ....+.+.|.+
T Consensus         1 i~gG~~~~~~e~Pw~v~l~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~v~~~~~~~~~~~~~~~~~v~~   76 (241)
T d1m9ua_           1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDG----VLPNNIRVIAGLWQQSDTSGTQTANVDS   76 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEEESSSEEEEEEEEECSSSEEEECHHHHTT----CCGGGEEEEESCSBTTCCTTCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEeCCCccEEEEEEEEeCCEEEEChhhccc----ccCceeeEEEEeeeccccccccccccee
Confidence            6899999999999999997543   56899999999999999999965    4566778888876654 44557789999


Q ss_pred             EEECCCCCCC--CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEee
Q psy13815        193 IMFHPSHSCS--SFNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV  269 (388)
Q Consensus       193 i~~hp~y~~~--~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~  269 (388)
                      +++||.|+..  .+.+|||||+|++++.+++.+.|+|+|..... ..+..+.+.||+........   +..++...++++
T Consensus        77 ~~~h~~~~~~~~~~~~diall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~  153 (241)
T d1m9ua_          77 YTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNL---PDILQKSSIPVI  153 (241)
T ss_dssp             EEECTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCC---CSBCEEEEEEBC
T ss_pred             eeeeeeeccccccccccceeeeccceeeeeeceeeeeeeccccccccceEEEEeecccccCCCCC---CCcceEEEEEee
Confidence            9999999874  46789999999999999999999999976654 67788999999988766543   778999999999


Q ss_pred             chhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCc
Q psy13815        270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES  349 (388)
Q Consensus       270 ~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~  349 (388)
                      +.++|+..+...+.. ......+|+.......+.|                              .||+||||++.. ++
T Consensus       154 ~~~~C~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------------------------------~g~sGgpl~~~~-~~  201 (241)
T d1m9ua_         154 TTAQCTAAMVGVGGA-NIWDNHICVQDPAGNTGAC------------------------------NGDSGGPLNCPD-GG  201 (241)
T ss_dssp             CHHHHHHHHTTSTTC-CCCTTEEEECCTTSCCBCC------------------------------TTCTTCEEEEES-SS
T ss_pred             chhHhhhhhhccccc-ccccceeEeecccCCcCcc------------------------------cCCCCcceEEec-CC
Confidence            999999988654332 3456677776666667778                              999999999875 46


Q ss_pred             cEEEEEEEecC----CCCCCCCCeEEEeCCCchhHHhhh
Q psy13815        350 TQVIGLVSTGI----GCARPRLPGLYTRLTRYIGWISDT  384 (388)
Q Consensus       350 ~~l~Gi~s~g~----~c~~~~~p~v~t~V~~~~~WI~~~  384 (388)
                      ++|+||+|+..    .|...+.|++||||++|++||+++
T Consensus       202 ~~l~Gi~s~~~~~g~~~~~~~~p~vft~V~~y~~WI~~n  240 (241)
T d1m9ua_         202 TRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDN  240 (241)
T ss_dssp             EEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHHH
T ss_pred             EEEEEEEEEEEcCCCCCCCCCCCEEEEEHHHhHHHHHHc
Confidence            78999998754    466778999999999999999986

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=100.00  E-value=1.6e-41  Score=297.75  Aligned_cols=219  Identities=34%  Similarity=0.587  Sum_probs=174.5

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||+++.+++|||+|+|.    +.|+||||+++||||||||+.+   ......+.|.+|..+......+.+  ..+.+|
T Consensus         1 ~~gG~~~~~~~~Pw~v~l~----~~C~GtLIs~~~VLTaAhCv~~---~~~~~~~~v~~g~~~~~~~~~~~i--~~~~i~   71 (223)
T d1os8a_           1 VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSG---SGNNTSITATGGVVDLQSSSAVKV--RSTKVL   71 (223)
T ss_dssp             CBSCEECCTTSSTTEEEET----TTEEEEEEETTEEEECGGGSSC---SEECCCCEEEESCSBTTCTTCEEE--EEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEe----ccEeEEEEeCCEEEEChhhccC---CCCcceeeeccccccccccccccc--eeeeee
Confidence            6899999999999999996    4599999999999999999976   234456788889888766555444  455556


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhh
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA  276 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~  276 (388)
                      |+|+.....||||||||++++.+.     +|++.......+..+.+.||+........   +..++...+++++.++|+.
T Consensus        72 ~~~~~~~~~~DIAllkL~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~C~~  143 (223)
T d1os8a_          72 QAPGYNGTGKDWALIKLAQPINQP-----TLKIATTTAYNQGTFTVAGWGANREGGSQ---QRYLLKANVPFVSDAACRS  143 (223)
T ss_dssp             ECTTCSSSSCCCEEEEESSCCCSC-----CCEECCSSTTSSSEEEEEESSCSSTTCCC---CSBCEEEEEEEECHHHHHH
T ss_pred             ecccccccceeeeeeeeeeeeecc-----cccccccccccccceEEeecccccccccc---ccccccceeeEeCHHHhhh
Confidence            666666778999999999998753     44443333356788999999987765544   7789999999999999998


Q ss_pred             HhhcCCCccccCCCeEEec-cCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec-CCccEEEE
Q psy13815        277 WYQSEGKKINVKESQMCAG-HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG-AESTQVIG  354 (388)
Q Consensus       277 ~~~~~~~~~~~~~~~~Ca~-~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~-~~~~~l~G  354 (388)
                      .+..    ......++|.. ...+..+.|                              .+|+|+||++.. .++|+|+|
T Consensus       144 ~~~~----~~~~~~~~~~~~~~~~~~~~c------------------------------~~~~G~pl~~~~~~~~~~L~G  189 (223)
T d1os8a_         144 AYGN----ELVANEEICAGYPDTGGVDTC------------------------------QGDSGGPMFRKDNADEWIQVG  189 (223)
T ss_dssp             HHGG----GSCTTTEEEESCTTTCCCBCC------------------------------TTCTTCEEEEECTTSCEEEEE
T ss_pred             hhcC----CCccCcceeeeccccCCcCcc------------------------------ccccccceEEecCCCeEEEEE
Confidence            8863    23344555544 444556778                              999999999965 46999999


Q ss_pred             EEEecCCCCCCCCCeEEEeCCCchhHHhhhhc
Q psy13815        355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLD  386 (388)
Q Consensus       355 i~s~g~~c~~~~~p~v~t~V~~~~~WI~~~i~  386 (388)
                      |+|++..|...+.|++||||+.|++||+++|+
T Consensus       190 i~s~~~~c~~~~~p~vft~V~~y~~WI~~~~k  221 (223)
T d1os8a_         190 IVSWGYGCARPGYPGVYTEVSTFASAIASAAR  221 (223)
T ss_dssp             EEEECSSSSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHh
Confidence            99999999888999999999999999999986

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=100.00  E-value=3.7e-41  Score=297.64  Aligned_cols=225  Identities=32%  Similarity=0.587  Sum_probs=182.3

Q ss_pred             EecceecCCCCcceEEEEccCC----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHG----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV  190 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v  190 (388)
                      |+||.++++++|||+|+|+...    .+.|+||||+++||||||||+..      .....+.++.....  ........+
T Consensus         1 iigG~~~~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~------~~~~~v~~~~~~~~~~~~~~~~~~~   74 (236)
T d1elta_           1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS------ARTWRVVLGEHNLNTNEGKEQIMTV   74 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSS------CCCEEEEESCSBTTSCCSCCEEECE
T ss_pred             CCCCEECCCCCCCcEEEEEEccCCcceeEEEEEEEeCCEEEECeeeccc------cccceeeccceeeecccCCceeeee
Confidence            6899999999999999996532    45799999999999999999976      33445666654433  444456778


Q ss_pred             EEEEECCCCCCCCC--CCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEE
Q psy13815        191 LRIMFHPSHSCSSF--NNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALS  267 (388)
Q Consensus       191 ~~i~~hp~y~~~~~--~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~  267 (388)
                      ..+.+||.|.....  .+|||||+|++|+.+++.++|||||..... .....+++.|||........   ...++...+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~diall~l~~~~~~~~~~~picL~~~~~~~~~~~~~~~~g~g~~~~~~~~---~~~~~~~~~~  151 (236)
T d1elta_          75 NSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPL---SDSLKQAWLP  151 (236)
T ss_dssp             EEEEECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCC---CSBCEEEECC
T ss_pred             eEEEEeeeecccccccCceEEEeeccCcceeecccceeecCchhcccCCCceEEEecccccccCccc---CccceeeeeE
Confidence            88888998877554  579999999999999999999999987664 55678999999988776544   6788999999


Q ss_pred             eechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecC
Q psy13815        268 VVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA  347 (388)
Q Consensus       268 i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~  347 (388)
                      +++..+|.....   ........++|+..  .....|                              .||+||||++..+
T Consensus       152 ~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~c------------------------------~gdsGgpl~~~~~  196 (236)
T d1elta_         152 SVDHATCSSSGW---WGSTVKTTMVCAGG--GANSGC------------------------------NGDSGGPLNCQVN  196 (236)
T ss_dssp             EECHHHHTSTTT---TGGGSCTTEEEECC--SSCBCC------------------------------TTCTTCEEEEEET
T ss_pred             EEcHHHhhhhcc---cccccceeeeecCC--cccccc------------------------------ccccccceEEEEC
Confidence            999999987654   22344556666643  345678                              9999999999999


Q ss_pred             CccEEEEEEEecC--CCCCCCCCeEEEeCCCchhHHhhhh
Q psy13815        348 ESTQVIGLVSTGI--GCARPRLPGLYTRLTRYIGWISDTL  385 (388)
Q Consensus       348 ~~~~l~Gi~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i  385 (388)
                      ++|+|+||+|++.  +|...+.|.+||||+.|++||+++|
T Consensus       197 ~~~~l~GI~s~~~~~~c~~~~~p~vyt~v~~y~~WI~~vi  236 (236)
T d1elta_         197 GSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM  236 (236)
T ss_dssp             TEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHHC
T ss_pred             CeEEEEEEEEEeCCCCCCCCCCCEEEEEHHHHHHHHHHhC
Confidence            9999999999965  6888888999999999999999875

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=1.1e-41  Score=301.29  Aligned_cols=224  Identities=27%  Similarity=0.492  Sum_probs=181.6

Q ss_pred             EecceecCCCCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEEC
Q psy13815        117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFH  196 (388)
Q Consensus       117 i~~g~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~h  196 (388)
                      |+||.++.+++|||+|.|..++.+.|+||||+++||||||||+.+.      ....+............+...+...+.|
T Consensus         1 i~gG~~~~~~e~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (237)
T d1gvza_           1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSDD------YQIWLGRHNLSKDEDTAQFHQVSDSFLD   74 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCSS------CEEEESCSBTTSCCTTCEEECEEEEEEC
T ss_pred             CCCCEECCCCCCCcEEEEEECCeEEEEEEEEeCCEEEeChhhccCC------CceeEeeeeeccccCcceeeeeeeEEee
Confidence            6899999999999999999999999999999999999999999762      1111111112222334556778888888


Q ss_pred             CCCCC-----------CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEE
Q psy13815        197 PSHSC-----------SSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVA  265 (388)
Q Consensus       197 p~y~~-----------~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~  265 (388)
                      +.|..           ....+|||||||++|+.+++.++|+|||.... ..+..+++.|||........  .+..|++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~Diali~L~~pv~~~~~v~p~~l~~~~~-~~~~~~~~~g~g~~~~~~~~--~~~~l~~~~  151 (237)
T d1gvza_          75 PQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEP-KLGSTCYTSGWGLISTFTNR--GSGTLQCVE  151 (237)
T ss_dssp             TTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEEEECSCTTTCS--EEEEEEEEE
T ss_pred             eeeeeeeeecccccCccccccceEEEEECCceeccccccccccccccc-ccceeEEEEeeeeecccccc--ccceeeEEE
Confidence            88753           23468999999999999999999999997766 67788999999987654332  256799999


Q ss_pred             EEeechhhhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEe
Q psy13815        266 LSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLL  345 (388)
Q Consensus       266 ~~i~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~  345 (388)
                      +++++.+.|...+..     ...+.++|.....+....|                              .||+||||++.
T Consensus       152 ~~~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~~~~~------------------------------~gdsG~pl~~~  196 (237)
T d1gvza_         152 LRLQSNEKCARAYPE-----KMTEFVLCATHRDDSGSIC------------------------------LGDSGGALICD  196 (237)
T ss_dssp             EEEECGGGGCSSCGG-----GCCTTEEEEECSSTTCEEC------------------------------GGGTTCEEEET
T ss_pred             EEeecHHHHHhhccc-----ccccccccceecccccccc------------------------------cCCCCCcEEEc
Confidence            999999999987763     4566778877766777888                              99999999995


Q ss_pred             cCCccEEEEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        346 GAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       346 ~~~~~~l~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                          ++|+||+|+|. .|...+.|.+||||++|++||+++|+.|
T Consensus       197 ----~~l~Gv~s~g~~~c~~~~~p~v~t~v~~y~~WI~~~i~~~  236 (237)
T d1gvza_         197 ----GVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIEKN  236 (237)
T ss_dssp             ----TEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHHHH
T ss_pred             ----CEEEEEEEeccCCCCCCCCCeEEEEHHHHHHHHHHHHHhc
Confidence                48999999987 5766788999999999999999999764

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.8e-41  Score=297.95  Aligned_cols=218  Identities=33%  Similarity=0.601  Sum_probs=176.6

Q ss_pred             CcceEEEEccCC----ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC----CCceeeeceEEEEECCC
Q psy13815        127 EFPWIVSLKRHG----GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS----RPSISTVPVLRIMFHPS  198 (388)
Q Consensus       127 ~~Pw~v~i~~~~----~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~----~~~~~~~~v~~i~~hp~  198 (388)
                      +|||+|+|+.+.    .++|+||||+++||||||||+.+      .....+.+|.....    ....+...|.++++||+
T Consensus         1 ~~PW~v~l~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~------~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~hp~   74 (232)
T d1fona_           1 SWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST------SRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPL   74 (232)
T ss_dssp             CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCT------TSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTT
T ss_pred             CCccEEEEEEeCCCceEEEEEEEEecCCEEEEChhhccC------CCceEEEEEeccccccccccccccceeEEEEEccC
Confidence            599999997532    45899999999999999999976      33455566554443    12234567999999999


Q ss_pred             CCCCC--CCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC-CCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhh
Q psy13815        199 HSCSS--FNNDIALLELTRSIQWSDLIRPACLPSGSLD-YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ  275 (388)
Q Consensus       199 y~~~~--~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~  275 (388)
                      |+...  .++|||||+|++++.+++.++|||||..... ..+..+.+.||+........   +..++...+++++.++|.
T Consensus        75 ~~~~~~~~~~diAll~l~~~~~~~~~~~pic~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  151 (232)
T d1fona_          75 WNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPL---PDKLQQALLPTVDYEHCS  151 (232)
T ss_dssp             CCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSC---CSBCEEEECCEECHHHHT
T ss_pred             ccccccccccceeeeecccceEEeecceeeecCcccccCCCCceeEeeccccccCCCCC---CCcceEEEEEEEcHHHhh
Confidence            98754  3589999999999999999999999987654 55678899999988766544   778999999999999998


Q ss_pred             hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEec-CCccEEEE
Q psy13815        276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG-AESTQVIG  354 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~-~~~~~l~G  354 (388)
                      +...   ....+...++|+...  ....|                              .||+||||++.. +++|+|+|
T Consensus       152 ~~~~---~~~~~~~~~~c~~~~--~~~~~------------------------------~gdsGgpl~~~~~~~~~~L~G  196 (232)
T d1fona_         152 QWDW---WGITVKKTMVCAGGD--TRSGC------------------------------NGDSGGPLNCPAADGSWQVHG  196 (232)
T ss_dssp             STTT---TGGGCCTTEEEECCS--SSCST------------------------------TSCTTCEEEEECSSSCEEEEE
T ss_pred             hhhc---cCceeeeceeeeccc--ccccc------------------------------ccCCCCceEEEccCCCEEEEE
Confidence            7654   234578889998643  45667                              999999999864 57999999


Q ss_pred             EEEecC--CCCCCCCCeEEEeCCCchhHHhhhhccC
Q psy13815        355 LVSTGI--GCARPRLPGLYTRLTRYIGWISDTLDIH  388 (388)
Q Consensus       355 i~s~g~--~c~~~~~p~v~t~V~~~~~WI~~~i~~~  388 (388)
                      |+|++.  +|+..+.|++||||++|++||+++|+.|
T Consensus       197 i~s~~~~~~c~~~~~p~vyt~V~~y~~WI~~~i~~~  232 (232)
T d1fona_         197 VTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIASN  232 (232)
T ss_dssp             EEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHHHC
T ss_pred             EEEEcCCCCCCCCCCCEEEEEHHHHHHHHHHHHHcC
Confidence            999975  5877888999999999999999999864

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-41  Score=304.11  Aligned_cols=227  Identities=20%  Similarity=0.384  Sum_probs=161.5

Q ss_pred             ecCCCCcceEEEEccC----CceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECC
Q psy13815        122 AANPGEFPWIVSLKRH----GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHP  197 (388)
Q Consensus       122 ~~~~~~~Pw~v~i~~~----~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp  197 (388)
                      .++.++|||+|+|...    +.++|+||||+++||||||||+..   ......+.|.+|...      +.+.|+++++||
T Consensus        10 ~t~~~e~PW~v~i~~~~~~~~~~~C~GtLIs~~~VLTAAhCv~~---~~~~~~~~v~~g~~~------~~~~v~~i~~Hp   80 (287)
T d1rrka1          10 GTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV---DDKEHSIKVSVGGEK------RDLEIEVVLFHP   80 (287)
T ss_dssp             CCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCT---TCCGGGEEEEETTCS------SCEEEEEEEECT
T ss_pred             CCCcCCCCCEEEEEEEECCCCcEEEEEEEecCCEEEEChhheec---CCCcceEEEEeCCee------ceeeeEEEEecC
Confidence            4567899999999652    367999999999999999999975   234556888888643      457899999999


Q ss_pred             CCCC---------CCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCC------CCCCeEEEEEccccCCCC----CCCCCC
Q psy13815        198 SHSC---------SSFNNDIALLELTRSIQWSDLIRPACLPSGSLD------YSEQSVTVAGWGWTNENP----SQGRRS  258 (388)
Q Consensus       198 ~y~~---------~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~------~~~~~~~~~GwG~~~~~~----~~~~~~  258 (388)
                      +|+.         ..+.||||||||++|+.|+++|+|||||.....      .....+...+|+......    ......
T Consensus        81 ~y~~~~~~~~~~~~~~~~DIALl~L~~~~~~s~~v~PIcLp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (287)
T d1rrka1          81 NYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEE  160 (287)
T ss_dssp             TCCTTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESS
T ss_pred             CccccccccccCCCcccccEEEEecccCccccceEEEEecCCccccccccccCCcceEeecCceeecCCCccccccccCC
Confidence            9974         345689999999999999999999999975321      111111111222111100    000114


Q ss_pred             ccceEEEEEeechhhhhh---Hhhc-------CCCccccCCCeEEeccCCC--CcCcccCCcccCCcccccccccCCCCC
Q psy13815        259 NILQKVALSVVSNQVCQA---WYQS-------EGKKINVKESQMCAGHEQG--GKDACWVSRQWWTPHVARGRVYPSHRS  326 (388)
Q Consensus       259 ~~l~~~~~~i~~~~~C~~---~~~~-------~~~~~~~~~~~~Ca~~~~~--~~~~C~~~~~~~~~~~~~~~~~~~~~~  326 (388)
                      ..++...+.+.+...|..   ....       ......++++||||+...+  +.+.|                      
T Consensus       161 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~~~C----------------------  218 (287)
T d1rrka1         161 KKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTC----------------------  218 (287)
T ss_dssp             SCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCC----------------------
T ss_pred             ceeEEEEEEEeccchhhhhhhhhhccccccccccccccccCCceEecccCCCcCCCCC----------------------
Confidence            567777888777665432   2111       1122356789999976433  35668                      


Q ss_pred             CCCCCCCCCCcCCCceEEecCCccEEEEEEEecCC--CC--------CCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        327 GVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG--CA--------RPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       327 ~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~--c~--------~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                              .|||||||++..+++|+|+||+|||..  |.        ....|.|||||+.|++||+++|+.
T Consensus       219 --------~GDSGgPL~~~~~~~~~lvGI~S~G~~~~~~~~~~~~~~~~~~~~vyt~V~~y~~WI~~~i~~  281 (287)
T d1rrka1         219 --------RGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQD  281 (287)
T ss_dssp             --------GGGTTCEEEEEETTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTT
T ss_pred             --------CCCccCCeEEecCCeEEEEEEEEecCCcCcCCCCCCCcCCCCCCcEEEEHHHHHHHHHHHhcC
Confidence                    999999999999999999999999753  32        224688999999999999999864

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.3e-40  Score=287.59  Aligned_cols=212  Identities=30%  Similarity=0.592  Sum_probs=156.6

Q ss_pred             CCcceEEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC--CCceeeece-----------EE
Q psy13815        126 GEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS--RPSISTVPV-----------LR  192 (388)
Q Consensus       126 ~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~--~~~~~~~~v-----------~~  192 (388)
                      +++||||.|+..++++|+||||+++||||||||+.+.        ..+.+|.....  ....+...+           ..
T Consensus         1 ~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (228)
T d1sgfa_           1 NSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDK--------YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSL   72 (228)
T ss_dssp             CCCTTEEEEECTTSCCEEEEECSSSEEEECGGGCCSC--------CEEEECC----C-CTTCEEEEEEEEEECTTSCGGG
T ss_pred             CCCCcEEEEEECCcEEEEEEEEcCCEEEeCHHHccCC--------ceEEEeeeeeccccccceeeeeeeeccccceeeee
Confidence            3679999999988999999999999999999999751        23555544332  112122222           23


Q ss_pred             EEECCCCCCCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechh
Q psy13815        193 IMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQ  272 (388)
Q Consensus       193 i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~  272 (388)
                      +..|+.|+.....+|||||+|++|+.|++.++|||||.... .....+.+.||+.+.....  ..+..|+...+.+++.+
T Consensus        73 ~~~~~~~~~~~~~~Diall~L~~~v~~~~~v~pi~l~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~~l~~~~~~~~~~~  149 (228)
T d1sgfa_          73 LNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEP-KLGSTCLASGWGSTTPIKF--KYPDDLQCVNLKLLPNE  149 (228)
T ss_dssp             C----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCC-CTTCEEEEC-------C-----------CEEEEEECTH
T ss_pred             ecccCCCCccccccceeEEeeccccccCCceeeEecCcccc-ccCcceEEEeeeeccCCcc--CCCCccEEEEEEEeCHH
Confidence            56889999999999999999999999999999999998776 5677899999988765432  23678999999999999


Q ss_pred             hhhhHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEE
Q psy13815        273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV  352 (388)
Q Consensus       273 ~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l  352 (388)
                      +|+..+.     ....+.++|+....+....|                              .+|+|+||++.    ++|
T Consensus       150 ~C~~~~~-----~~~~~~~~~~~~~~~~~~~~------------------------------~~d~G~pl~~~----~~l  190 (228)
T d1sgfa_         150 DCDKAHE-----MKVTDAMLCAGEMDGGSYTC------------------------------EHDSGGPLICD----GIL  190 (228)
T ss_dssp             HHHTTCS-----SBCCTTEEEEEECSSSEEEC------------------------------CCCTTCEEEET----TEE
T ss_pred             Hhhhhcc-----CCcccceEEeccCCCCcccc------------------------------CCCcCCcEEEe----CEE
Confidence            9987664     24567788988777777788                              99999999985    489


Q ss_pred             EEEEEecC-CCCCCCCCeEEEeCCCchhHHhhhhcc
Q psy13815        353 IGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTLDI  387 (388)
Q Consensus       353 ~Gi~s~g~-~c~~~~~p~v~t~V~~~~~WI~~~i~~  387 (388)
                      +||+|+|. .|...+.|++||||+.|++||+++|+.
T Consensus       191 ~Gv~S~g~~~c~~~~~p~vyt~V~~~~~WI~~~i~~  226 (228)
T d1sgfa_         191 QGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMAN  226 (228)
T ss_dssp             EEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHHS
T ss_pred             EEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHhH
Confidence            99999986 687888999999999999999999974

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=99.92  E-value=2.6e-27  Score=205.20  Aligned_cols=199  Identities=15%  Similarity=0.199  Sum_probs=132.0

Q ss_pred             CCCcceEEEEc-cCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCC-C
Q psy13815        125 PGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSC-S  202 (388)
Q Consensus       125 ~~~~Pw~v~i~-~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~-~  202 (388)
                      ...|||.+.++ ..+...|+|+||+++||||||||+.+.........+.+..+....... .....+.+++.||.|.. .
T Consensus        14 ~~~~P~~~~~~i~~~~~~CsG~LI~~~~VLTaaHCv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   92 (215)
T d1p3ca_          14 TRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAV-NGSANMTEFYVPSGYINTG   92 (215)
T ss_dssp             TTSTTGGGEEEEECSSCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCT-TCCEEEEEEECCHHHHHHC
T ss_pred             CCCCCcEEEEEEEcCCeEEEEEEEeCCEEEECcceeccCCCCceeeeEEEeccccCCCCC-ceeEEEeEEEEecccccCC
Confidence            46689955444 234568999999999999999999774433333445667766554432 24578999999998865 4


Q ss_pred             CCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCC
Q psy13815        203 SFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG  282 (388)
Q Consensus       203 ~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~  282 (388)
                      ...+|+|||+|+.++..  ...+++++.... ..++.+.++||+........   ...+..........           
T Consensus        93 ~~~~DiAll~l~~~~~~--~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~~---~~~~~~~~~~~~~~-----------  155 (215)
T d1p3ca_          93 ASQYDFAVIKTDTNIGN--TVGYRSIRQVTN-LTGTTIKISGYPGDKMRSTG---KVSQWEMSGSVTRE-----------  155 (215)
T ss_dssp             CGGGCCEEEEESSCHHH--HHCCCCBCCCSC-CTTCEEEEEECCHHHHHHHS---SCCCEEEEEECCEE-----------
T ss_pred             CccceEEEEEeccCCCc--cccccccccccc-cCCceeEEEcCCCCcCCCcc---cceeeEeeeccccc-----------
Confidence            55689999999998763  345556665544 67889999999875432111   11122211111110           


Q ss_pred             CccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecCCC
Q psy13815        283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGC  362 (388)
Q Consensus       283 ~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~~c  362 (388)
                           ... .+.    ...+.|                              .|||||||+.   ..++|+||+|+|..|
T Consensus       156 -----~~~-~~~----~~~~~~------------------------------~G~SGgPl~~---~~~~lvGi~s~g~~~  192 (215)
T d1p3ca_         156 -----DTN-LAY----YTIDTF------------------------------SGNSGSAMLD---QNQQIVGVHNAGYSN  192 (215)
T ss_dssp             -----CSS-EEE----ECCCCC------------------------------TTCTTCEEEC---TTSCEEEECCEEEGG
T ss_pred             -----ccc-cce----eecccC------------------------------CCCccCeEEC---CCCEEEEEEEeccCC
Confidence                 111 111    123456                              9999999994   345799999998876


Q ss_pred             CC-CCCCeEEEeCCCchhHHhhh
Q psy13815        363 AR-PRLPGLYTRLTRYIGWISDT  384 (388)
Q Consensus       363 ~~-~~~p~v~t~V~~~~~WI~~~  384 (388)
                      .. ...|.+|++|.+|++||++.
T Consensus       193 ~~~~~~~~i~~~v~~~i~wi~~~  215 (215)
T d1p3ca_         193 GTINGGPKATAAFVEFINYAKAQ  215 (215)
T ss_dssp             GTEEEEEBCCHHHHHHHHHHHTC
T ss_pred             CCCCCCeEEEeEHHHHHHHHHcC
Confidence            54 23477899999999999873

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=99.91  E-value=3.1e-26  Score=204.77  Aligned_cols=209  Identities=13%  Similarity=0.149  Sum_probs=114.5

Q ss_pred             eEEEEccCCceeEEEEEee------CCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCC
Q psy13815        130 WIVSLKRHGGHFCGGTIIH------EQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSS  203 (388)
Q Consensus       130 w~v~i~~~~~~~C~GtLI~------~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~  203 (388)
                      .++.+...+.++|+||||+      ++||||||||+.+    .....+.+.++....... .....+.+...|+.|+...
T Consensus        24 ~v~~~~~~g~~~CGGsLI~~~~~~~~~~VLTAAHCv~~----~~~~~~~v~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~   98 (263)
T d1arba_          24 AVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMG----TASTAASIVVYWNYQNST-CRAPNTPASGANGDGSMSQ   98 (263)
T ss_dssp             GEEEEEETTEEEEEEEEBCCTTCCCCCEEEEEGGGSCC----SHHHHHTCEEEESCCCSS-CCCTTSGGGGSCCCCCCCC
T ss_pred             EEEEEecCCcEEEEEEEECCCCCCccceEEEchhhCCC----CCCcceEEEEEEEeeccc-ceeeeeeeeecccCcccee
Confidence            5677888889999999998      6799999999976    222333344443333221 1223344455677666555


Q ss_pred             CCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhhhHhhcCCC
Q psy13815        204 FNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK  283 (388)
Q Consensus       204 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~  283 (388)
                      ..+|++|+++..+.++    ..+.|+...  .........+|+.+........ ........+..+...+|......  .
T Consensus        99 ~~~~~~l~~~~~~~Di----all~l~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~  169 (263)
T d1arba_          99 TQSGSTVKATYATSDF----TLLELNNAA--NPAFNLFWAGWDRRDQNYPGAI-AIHHPNVAEKRISNSTSPTSFVA--W  169 (263)
T ss_dssp             EEECEEEEEEETTTTE----EEEEESSCC--CGGGCCEEBCEECCSCCCSCEE-EEECGGGCSCEEEEECSCCEEEC--T
T ss_pred             eecchheeecCCCcce----eeeeccccc--ccccceeeeccCccccCCcccc-ceeccccceeeeecccccchhhc--c
Confidence            4444444444433221    111111110  1112223344443332211100 00000001111222223222211  1


Q ss_pred             ccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEEEEecC-CC
Q psy13815        284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI-GC  362 (388)
Q Consensus       284 ~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi~s~g~-~c  362 (388)
                      ...+...++|+....+..+.|                              +|||||||++.++   .++|++|++. .|
T Consensus       170 ~~~~~~~~~c~~~~~~~~~~c------------------------------~GDSGGPL~~~~g---~~vGvvsgg~s~c  216 (263)
T d1arba_         170 GGGAGTTHLNVQWQPSGGVTE------------------------------PGSSGSPIYSPEK---RVLGQLHGGPSSC  216 (263)
T ss_dssp             TSSSCSSEEEEECCTTSCCCC------------------------------TTCTTCEEECTTS---CEEEEEEECSCCT
T ss_pred             CCCCCccEEEEEecCCCcccc------------------------------CCCCcceEEecCC---CEEEEEEEEEeCC
Confidence            224567899999887777888                              9999999997543   4899999985 33


Q ss_pred             C--CCCCCeEEEeCCCchhHHhhhh
Q psy13815        363 A--RPRLPGLYTRLTRYIGWISDTL  385 (388)
Q Consensus       363 ~--~~~~p~v~t~V~~~~~WI~~~i  385 (388)
                      .  ..+.|++|+||+.|.+||...+
T Consensus       217 ~~c~~~~p~vYtrV~~~~~~~~~~~  241 (263)
T d1arba_         217 SATGTNRSDQYGRVFTSWTGGGAAA  241 (263)
T ss_dssp             TCCGGGSEEEEEEHHHHHHTTSSGG
T ss_pred             cCCCCCCCceEEEEEEeeccCCcch
Confidence            2  2368999999999877776544

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.71  E-value=3.8e-17  Score=143.25  Aligned_cols=120  Identities=17%  Similarity=0.211  Sum_probs=78.0

Q ss_pred             cCCCCcce--EEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCC----CceeeeceEEEEEC
Q psy13815        123 ANPGEFPW--IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSR----PSISTVPVLRIMFH  196 (388)
Q Consensus       123 ~~~~~~Pw--~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~----~~~~~~~v~~i~~h  196 (388)
                      ....++||  ++.|...+...|+|+||++++|||||||+....  .....+.+.........    .....+.+..+..+
T Consensus        36 ~~~~~~p~~~v~~i~~~g~~~gTG~lI~~~~ILTa~Hvv~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (242)
T d1agja_          36 KDRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAKFAN--GDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQE  113 (242)
T ss_dssp             TGGGSTTGGGEEEEEETTTEEEEEEECSSSEEEECHHHHGGGT--TCGGGEEEEETCEECTTSCEECTTCCEEEEEEESC
T ss_pred             cccccCCcccEEEEEeCCCccEEEEEEeCCEEEEcccEeccCC--CceEEEEEeecceecccceeeeccceEEEEEEeee
Confidence            34456777  578888888899999999999999999996522  11222333222211111    11123456666555


Q ss_pred             CCCCCCCCCCcEEEEEeCCCCCC---CCCeeeeeCCCCCCCCCCCeEEEEEcccc
Q psy13815        197 PSHSCSSFNNDIALLELTRSIQW---SDLIRPACLPSGSLDYSEQSVTVAGWGWT  248 (388)
Q Consensus       197 p~y~~~~~~~DIALl~L~~~v~~---~~~v~picLp~~~~~~~~~~~~~~GwG~~  248 (388)
                      |.    ...+|||||+|+.+...   .+.+.|+.|........++.++++||...
T Consensus       114 ~~----~~~~D~All~l~~~~~~~~~~~~~~~~~l~~s~~~~~G~~v~~~GyP~~  164 (242)
T d1agja_         114 PF----GAGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFD  164 (242)
T ss_dssp             TT----CTTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTT
T ss_pred             cC----CCcCcEEEEEeccccccccccccCcceeecccccccCCcEEEEEEcCCC
Confidence            43    23569999999866432   34578888877654467889999999643

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.68  E-value=8.6e-16  Score=131.95  Aligned_cols=190  Identities=12%  Similarity=0.149  Sum_probs=107.1

Q ss_pred             CCCCcce--EEEEcc---CCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCC
Q psy13815        124 NPGEFPW--IVSLKR---HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS  198 (388)
Q Consensus       124 ~~~~~Pw--~v~i~~---~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~  198 (388)
                      +..++||  ++.|..   .+.+.|+|+||++++|||||||+.+...  ....+.+.......................  
T Consensus        13 d~~~~p~~~v~~i~~~~~~~~~~cTG~lI~~~~vLTAaHcv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   88 (216)
T d2o8la1          13 DTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHG--DPHALKAFPSAINQDNYPNGGFTAEQITKY--   88 (216)
T ss_dssp             STTSGGGTTEEEEEEEETTEEEEEEEEEEETTEEEECHHHHHTTTT--CGGGEEEEETCCBTTBCTTCCEEEEEEEEC--
T ss_pred             CCCcCchheEEEEEEEcCCCCEEEEEEEEeCCEEEEeeeeeccCCC--ceEEEEEEecccccceeeeeeEEeeeeecc--
Confidence            3566777  455543   3467899999999999999999987432  122233333322222111112222222222  


Q ss_pred             CCCCCCCCcEEEEEeCCCCCCCCCeeee---eCCCCCCCCCCCeEEEEEccccCCCCCCCCCCccceEEEEEeechhhhh
Q psy13815        199 HSCSSFNNDIALLELTRSIQWSDLIRPA---CLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ  275 (388)
Q Consensus       199 y~~~~~~~DIALl~L~~~v~~~~~v~pi---cLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~~~l~~~~~~i~~~~~C~  275 (388)
                          ...+|+|||+|+.+........+.   .+........+....++||.....       ..........+..     
T Consensus        89 ----~~~~D~all~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~-------~~~~~~~~~~~~~-----  152 (216)
T d2o8la1          89 ----SGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKP-------VATMWESKGKITY-----  152 (216)
T ss_dssp             ----SSSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSS-------TTCEEEEEEEEEE-----
T ss_pred             ----ccCCceEEEEecccccccccccceeeeeccccccccCCceeEEEEccCCCc-------eeeEEEEeeEEEE-----
Confidence                235799999998877654433333   333333335667788888864332       1222222222221     


Q ss_pred             hHhhcCCCccccCCCeEEeccCCCCcCcccCCcccCCcccccccccCCCCCCCCCCCCCCCcCCCceEEecCCccEEEEE
Q psy13815        276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL  355 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPL~~~~~~~~~l~Gi  355 (388)
                                 .....+..     ..+.|                              +|+|||||+...   ..|+||
T Consensus       153 -----------~~~~~l~~-----~~~~~------------------------------~G~SGgPv~~~~---g~vVGI  183 (216)
T d2o8la1         153 -----------LKGEAMQY-----DLSTT------------------------------GGNSGSPVFNEK---NEVIGI  183 (216)
T ss_dssp             -----------EETTEEEE-----SCCCC------------------------------TTCTTCEEECTT---SCEEEE
T ss_pred             -----------ccCCeEEE-----ecCcC------------------------------CCCCCCcEECCC---CEEEEE
Confidence                       12233332     23445                              999999999432   359999


Q ss_pred             EEecCCCCCCCCCeEEEeCC-CchhHHhhhhc
Q psy13815        356 VSTGIGCARPRLPGLYTRLT-RYIGWISDTLD  386 (388)
Q Consensus       356 ~s~g~~c~~~~~p~v~t~V~-~~~~WI~~~i~  386 (388)
                      +++|..+.    ....+++. ...+||+++|+
T Consensus       184 ~s~g~~~~----~~~~v~~~~~~~~~i~~~i~  211 (216)
T d2o8la1         184 HWGGVPNE----FNGAVFINENVRNFLKQNIE  211 (216)
T ss_dssp             EEEEETTT----EEEEEECCHHHHHHHHHHCT
T ss_pred             EeeecCCC----CcceEecCHHHHHHHHHhhh
Confidence            99885432    22344454 58899999885

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=99.60  E-value=4.9e-16  Score=130.14  Aligned_cols=43  Identities=21%  Similarity=0.298  Sum_probs=38.0

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHH
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI  381 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI  381 (388)
                      .|||||||++..    .++||+|++..|.....+.+|++|+.++.+.
T Consensus       140 ~GDSGgPl~~~~----~~vGi~s~g~~~~~~~~~~~~~pv~~~l~~~  182 (187)
T d1hpga_         140 GGDSGGAHFAGS----VALGIHSGSSGCSGTAGSAIHQPVTEALSAY  182 (187)
T ss_dssp             TTCTTCEEEETT----EEEEEEEEESCCBTTBCCCEEEEHHHHHHHH
T ss_pred             cCCCCCeEEECC----EEEEEEEEEecCCCCCCCEEEEEHHHHHHHh
Confidence            999999999854    5999999999887777889999999988764

>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Exfoliative toxin B
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.39  E-value=1.4e-12  Score=113.70  Aligned_cols=120  Identities=15%  Similarity=0.160  Sum_probs=74.6

Q ss_pred             cCCCCcce--EEEEccCCceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCC-----CCceeeeceEEEEE
Q psy13815        123 ANPGEFPW--IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS-----RPSISTVPVLRIMF  195 (388)
Q Consensus       123 ~~~~~~Pw--~v~i~~~~~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~-----~~~~~~~~v~~i~~  195 (388)
                      .+..++||  ++.|...+..+|+|+||++++||||+||+.+..  .....+.+..+.....     ......+.+..+..
T Consensus        29 ~d~~~~p~~~v~~i~~~g~~~GTGflI~~~~ILTa~HVv~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (246)
T d1qtfa_          29 TDNARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAREAA--KNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKE  106 (246)
T ss_dssp             SCCSSTTGGGEEEEEETTTEEEEEEEEETTEEEECHHHHGGGT--TCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEES
T ss_pred             cccccCccccEEEEEeCCCceEEEEEEeCCeEEEchhecccCC--cceEEEEEecCCcceeeeeeecCCCceEEEEEEEe
Confidence            34566777  888888888999999999999999999996521  1223444555543322     11222344555555


Q ss_pred             CCCCCCCCCCCcEEEEEeCCCCCCCCCeeeee---CCCCCCCCCCCeEEEEEcccc
Q psy13815        196 HPSHSCSSFNNDIALLELTRSIQWSDLIRPAC---LPSGSLDYSEQSVTVAGWGWT  248 (388)
Q Consensus       196 hp~y~~~~~~~DIALl~L~~~v~~~~~v~pic---Lp~~~~~~~~~~~~~~GwG~~  248 (388)
                      ++.    ....|+|||+|+..........++.   +........++..+++||...
T Consensus       107 ~~~----~~~~DiAll~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~P~~  158 (246)
T d1qtfa_         107 SPY----GQGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYN  158 (246)
T ss_dssp             CTT----CTTSCCEEEEECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTT
T ss_pred             cCC----cccCceEEEEeccccccccccccCceeeccccccccCCCEEEEEeCCCC
Confidence            443    2346999999987765443333222   222222256778899998644

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=8.1e-13  Score=114.48  Aligned_cols=88  Identities=36%  Similarity=0.644  Sum_probs=75.8

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.|++..++++++++|+..+...    .+.+.++|++......+.|.||+|+||++..+++|+|+||+|++..|.    
T Consensus       142 ~~~~~~~~~~~~~~~~C~~~~~~~----~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~~~~l~Gi~s~g~~~~~~~~  217 (237)
T d1xx9a_         142 QNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRER  217 (237)
T ss_dssp             CSBCEEEECCEECHHHHHHHTTTS----CCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEEESSSSCTTC
T ss_pred             CCccEEEEEEEeCHHHHhhhhcCC----CCCCceEEEecCCCCcccccCCccceeEEecCCEEEEEEEEEeCCCCCCCCC
Confidence            567999999999999998876542    567899999876667889999999999999999999999999998873    


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       .  ++++.|.+||.+++.
T Consensus       218 p~vft~v~~~~~WI~~~~~  236 (237)
T d1xx9a_         218 PGVYTNVVEYVDWILEKTQ  236 (237)
T ss_dssp             CEEEECGGGGHHHHHHHHC
T ss_pred             CEEEEEhHHhHhHHHHHHC
Confidence             2  788899999988764

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=99.27  E-value=2.1e-12  Score=111.89  Aligned_cols=88  Identities=38%  Similarity=0.658  Sum_probs=75.8

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.|+++.+.+++.+.|+..++..    .+.+.++|........+.|.||+||||++.++++|+|+||+|++..|.   
T Consensus       142 ~~~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~c~~~~~~~~~~~~gdsG~Pl~~~~~~~~~L~Gi~S~g~~c~~~~  217 (237)
T d2f91a1         142 TPDVLQKVTVPLVSDEDCRADYGAD----EILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYGCARPG  217 (237)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHHCTT----TSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESSSSCTT
T ss_pred             CCchheEEEEEEeCHHHHhhhccCC----cccCceeEeecCCCccccccCCCCCeEEEecCCeEEEEEEEEeCCCCCCCC
Confidence            3577999999999999999877642    467889999877777889999999999999999999999999998882   


Q ss_pred             ----ceeeEEEEeeccccc
Q psy13815         79 ----TSVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ----~~~~~~~~~wi~~~~   93 (388)
                          .++++.|.+||++.+
T Consensus       218 ~p~v~t~v~~y~~WI~~n~  236 (237)
T d2f91a1         218 YPGVYTEVSYHVDWIKANA  236 (237)
T ss_dssp             CCEEEEEGGGSHHHHHHHC
T ss_pred             CCEEEEEHHHHHHHHHHhC
Confidence                288999999998654

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2.1e-12  Score=110.73  Aligned_cols=83  Identities=29%  Similarity=0.433  Sum_probs=71.5

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      ...|+++++.++++++|++.+..     .+.++++|+....+..+.|.||+||||++..    +|+||+|++..|..   
T Consensus       136 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~c~~~~~~~~~~c~gdsGgPl~~~~----~l~Gi~S~g~~~~~~p~  206 (224)
T d1t32a1         136 TDTLREVQLRVQRDRQCLRIFGS-----YDPRRQICVGDRRERKAAFKGDSGGPLLCNN----VAHGIVSYGKSSGVPPE  206 (224)
T ss_dssp             CSBCEEEEEEBCCHHHHHHHSTT-----CCTTTEEEECCTTSSCBCCTTCTTCEEEETT----EEEEEEEECCTTCCSCE
T ss_pred             cceeeeeeeeecCHHHHHhhcCc-----ccccccceeecccccccccccCcCCeEEEcC----EEEEEEEEcCCCCCCCc
Confidence            46799999999999999998875     5778999997767778999999999999854    99999999987732   


Q ss_pred             --eeeEEEEeecccccc
Q psy13815         80 --SVVQLLTRWTLDLEV   94 (388)
Q Consensus        80 --~~~~~~~~wi~~~~~   94 (388)
                        ++++.|.+||++++.
T Consensus       207 vyt~v~~y~~WI~~~i~  223 (224)
T d1t32a1         207 VFTRVSSFLPWIRTTMR  223 (224)
T ss_dssp             EEEEGGGSHHHHHHHHC
T ss_pred             EEEEHHHhHHHHHHHHc
Confidence              889999999988764

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2.8e-12  Score=111.37  Aligned_cols=86  Identities=30%  Similarity=0.538  Sum_probs=74.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeecCCC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~~~~---   78 (388)
                      +..|++++++++++..|+..++.     .+...++|++...+..+.|.||+||||++.. +++|+|+||+|++..|.   
T Consensus       146 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~c~~~~~~~~~~c~gd~G~pl~~~~~~g~~~L~Gi~s~~~~c~~~~  220 (241)
T d1eaxa_         146 ALILQKGEIRVINQTTCENLLPQ-----QITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRN  220 (241)
T ss_dssp             CSBCEEEEEEECCHHHHHHHSTT-----TCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTT
T ss_pred             cccceEEEEEEeCHHHHHHHhCc-----cccCccceeccCCCCcccccCcccceeEEEcCCCeEEEEEEEEECCCCCCCC
Confidence            46799999999999999998876     5778999998776778999999999999865 68999999999998882   


Q ss_pred             ----ceeeEEEEeeccccc
Q psy13815         79 ----TSVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ----~~~~~~~~~wi~~~~   93 (388)
                          .++++.|.+||.+.+
T Consensus       221 ~p~vft~V~~y~~WI~~~~  239 (241)
T d1eaxa_         221 KPGVYTRLPLFRDWIKENT  239 (241)
T ss_dssp             CCEEEEESGGGHHHHHHHH
T ss_pred             CCEEEEEHHHHHHHHHHHh
Confidence                278899999998765

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=99.24  E-value=2.4e-12  Score=110.39  Aligned_cols=83  Identities=34%  Similarity=0.630  Sum_probs=71.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      ...|+++++.+++.++|+..++.     .+.+.+||++...+..+.|.||+||||++..    +|+||+|++.+|..   
T Consensus       131 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~C~~~~~~~~~~c~gdsGgPl~~~~----~l~Gi~S~g~~~~~~~~  201 (222)
T d1hj8a_         131 SNKLQCLNIPILSYSDCNNSYPG-----MITNAMFCAGYLEGGKDSCQGDSGGPVVCNG----ELQGVVSWGYGCAEPGN  201 (222)
T ss_dssp             TTBCEEEEEEBCCHHHHHHHSTT-----CCCTTEEEESCTTSSCBCCTTCTTCEEEETT----EEEEEEEECSSSSCTTC
T ss_pred             ccccEEEEEEEeCHHHHhhhccc-----ccccceEEEccCCCCcccccCCcccEEEECC----EEEEEEEEecCCCCCCC
Confidence            46789999999999999998875     5789999998776678899999999999854    89999999998832   


Q ss_pred             ----eeeEEEEeecccccc
Q psy13815         80 ----SVVQLLTRWTLDLEV   94 (388)
Q Consensus        80 ----~~~~~~~~wi~~~~~   94 (388)
                          +++..|.+||++++.
T Consensus       202 p~v~t~v~~y~~WI~~~i~  220 (222)
T d1hj8a_         202 PGVYAKVCIFNDWLTSTMA  220 (222)
T ss_dssp             CEEEEEGGGGHHHHHHHHH
T ss_pred             CEEEEEHHHHHHHHHHHHH
Confidence                788889999998764

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=4e-12  Score=109.70  Aligned_cols=87  Identities=24%  Similarity=0.468  Sum_probs=75.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      ++.|++++++++++..|...+..     .+.+..+|++...+..+.|.||+||||++..+++|+|+||+|++..|..   
T Consensus       140 ~~~l~~~~~~~~~~~~c~~~~~~-----~~~~~~~~~~~~~~~~~~~~gdsGgpl~~~~~~~~~l~Gi~s~g~~~~~~~~  214 (235)
T d1rfna_         140 ALVLQYLRVPLVDRATCLRSTKF-----TIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGK  214 (235)
T ss_dssp             CSBCEEEEEEBCCHHHHHHHCSS-----CCCTTEEEESCSSCSCBCCTTCTTCEEEEESSSCEEEEEEEEEESSSSCTTC
T ss_pred             cCcceEEEEecccccccccccCc-----eecCCeeEeecCCCCccccCCCCCceeEEecCCeEEEEEEEEeCCCCCCCCC
Confidence            56799999999999999887764     4667788887677778999999999999999999999999999998832   


Q ss_pred             ----eeeEEEEeecccccc
Q psy13815         80 ----SVVQLLTRWTLDLEV   94 (388)
Q Consensus        80 ----~~~~~~~~wi~~~~~   94 (388)
                          ++++.|.+||++++.
T Consensus       215 p~vyt~v~~~~~WI~~~~~  233 (235)
T d1rfna_         215 YGIYTKVSRYVNWIKEKTK  233 (235)
T ss_dssp             CEEEEEGGGTHHHHHHHHC
T ss_pred             CEEEEEHHHHHHHHHHHhc
Confidence                788899999998764

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=4.6e-12  Score=109.51  Aligned_cols=92  Identities=26%  Similarity=0.524  Sum_probs=74.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      +..|+++++++++...|...+..   ...+.+.++|++...+..+.|.||+||||++..+++|+|+||+|++..|..   
T Consensus       132 ~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~C~~~~~~~~~~c~gdsG~pl~~~~~~~~~l~Gi~s~g~~c~~~~~  208 (234)
T d1si5h_         132 DGLLRVAHLYIMGNEKCSQHHRG---KVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNR  208 (234)
T ss_dssp             CCBCEEEEEEEECGGGTCC----------CCTTEEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTC
T ss_pred             cceeEEEEeeccchhHhhhhhcc---ccccCCccEEEccCCcCCCCCcCccccceEEecCCeEEEEEEEEeCCCCCCCCC
Confidence            46799999999999999876643   224678999998777778999999999999999999999999999998831   


Q ss_pred             ----eeeEEEEeeccccccCCC
Q psy13815         80 ----SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        80 ----~~~~~~~~wi~~~~~~~~   97 (388)
                          ++++.|.+||++++....
T Consensus       209 p~vyt~i~~~~~WI~~~i~~~~  230 (234)
T d1si5h_         209 PGIFVRVAYYAKWIHKIILTYK  230 (234)
T ss_dssp             CEEEEEGGGGHHHHHHHHSSCC
T ss_pred             CEEEEEHHHHHHHHHHHhhcCC
Confidence                788899999999876543

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.1e-11  Score=107.44  Aligned_cols=93  Identities=28%  Similarity=0.463  Sum_probs=77.9

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeC--CcEEEEeeEEeecCCCc
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA--ESTQVIGLVSTGIGSPT   79 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~--~~~~~~Gi~s~~~~~~~   79 (388)
                      .++.++.+++.+++...|...+........+.+.++|++......+.|.||||+||++...  .+|+|+||+|++.+|..
T Consensus       140 ~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gdsG~pl~~~~~~~~~~~l~Gi~S~g~~c~~  219 (240)
T d2qy0b1         140 IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  219 (240)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS
T ss_pred             ccccceEEEEEEcCHHHHHHHhhccccCCceecceEEeccCCccceeeccccccceEEEeCCCCeEEEEEEEEECCCCCC
Confidence            3567899999999999999988655444457889999987777789999999999998754  57999999999998832


Q ss_pred             -----eeeEEEEeecccccc
Q psy13815         80 -----SVVQLLTRWTLDLEV   94 (388)
Q Consensus        80 -----~~~~~~~~wi~~~~~   94 (388)
                           ++++.|.+||++++.
T Consensus       220 ~p~vft~v~~~~~WI~~~i~  239 (240)
T d2qy0b1         220 GYGFYTKVLNYVDWIKKEME  239 (240)
T ss_dssp             SCEEEEEGGGGHHHHHHHTT
T ss_pred             CCeEEEEHHHHHHHHHHHhc
Confidence                 889999999987664

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.5e-11  Score=105.79  Aligned_cols=85  Identities=26%  Similarity=0.420  Sum_probs=73.7

Q ss_pred             cCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc----
Q psy13815          4 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT----   79 (388)
Q Consensus         4 ~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~----   79 (388)
                      ..++...+++++++.|...+..     .+..+++|+.........|.||+||||++..+++|+|+||+|++..|..    
T Consensus       141 ~~~~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~~~~~~gdsGgpl~~~~~~~~~L~Gv~s~g~~c~~~~~p  215 (233)
T d2p3ub1         141 TRLKMLEVPYVDRNSCKLSSSF-----IITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKY  215 (233)
T ss_dssp             SBCEEEEEEBCCHHHHHHHCSS-----CCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCC
T ss_pred             ccccccccccccchhhhcccCc-----eEeecceeeecccccCCCcCCCcccccEEecCCeEEEEEEEEECCCCCCCCCC
Confidence            4588899999999999987765     5678889987666678899999999999999999999999999998822    


Q ss_pred             ---eeeEEEEeeccccc
Q psy13815         80 ---SVVQLLTRWTLDLE   93 (388)
Q Consensus        80 ---~~~~~~~~wi~~~~   93 (388)
                         ++++.|.+||++++
T Consensus       216 ~vyt~v~~y~~WI~~~i  232 (233)
T d2p3ub1         216 GIYTKVTAFLKWIDRSM  232 (233)
T ss_dssp             EEEEEGGGGHHHHHHHT
T ss_pred             EEEEEHHHHHHHHHHHh
Confidence               78899999998765

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.6e-11  Score=109.52  Aligned_cols=95  Identities=17%  Similarity=0.242  Sum_probs=68.1

Q ss_pred             CcCceEEEEeeeChhhhHh---hhhc-------CCCccccCCCeeEecccC--CCcCCCCCCCCCceEEeeCCcEEEEee
Q psy13815          3 SNILQKVALSVVSNQVCQA---WYQS-------EGKKINVKESQMCAGHEQ--GGKDACWADSGGPLMLLGAESTQVIGL   70 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~---~~~~-------~~~~~~~~~~~~Cag~~~--~~~~~C~gdsGgpl~~~~~~~~~~~Gi   70 (388)
                      +..|+..++.+++...|..   ....       ......++++|||||...  .+.++|.|||||||++..+++|+|+||
T Consensus       160 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~~~C~GDSGgPL~~~~~~~~~lvGI  239 (287)
T d1rrka1         160 EKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGV  239 (287)
T ss_dssp             SSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEE
T ss_pred             CceeEEEEEEEeccchhhhhhhhhhccccccccccccccccCCceEecccCCCcCCCCCCCCccCCeEEecCCeEEEEEE
Confidence            4568888888887665432   2110       011234778999997533  335779999999999999999999999


Q ss_pred             EEeecC--CC---------------ceeeEEEEeeccccccCCC
Q psy13815         71 VSTGIG--SP---------------TSVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        71 ~s~~~~--~~---------------~~~~~~~~~wi~~~~~~~~   97 (388)
                      +|||..  |.               .++|+.|.+||++++....
T Consensus       240 ~S~G~~~~~~~~~~~~~~~~~~~~vyt~V~~y~~WI~~~i~~~~  283 (287)
T d1rrka1         240 ISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDED  283 (287)
T ss_dssp             EEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTTSS
T ss_pred             EEecCCcCcCCCCCCCcCCCCCCcEEEEHHHHHHHHHHHhcCCC
Confidence            999753  21               1678888999999887543

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=1.1e-11  Score=106.20  Aligned_cols=81  Identities=30%  Similarity=0.549  Sum_probs=68.5

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-C----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-S----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~----   77 (388)
                      +..|+++.+++++.++|++.++.     .+.++++|++.. ...+.|.||+|+||++.    |+|+||+|+|.. |    
T Consensus       136 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~C~~~~-~~~~~c~gd~G~pl~~~----~~l~Gi~S~g~~~c~~~~  205 (225)
T d1npma_         136 PNTLNCAEVKIYSQNKCERAYPG-----KITEGMVCAGSS-NGADTCQGDSGGPLVCD----GMLQGITSWGSDPCGKPE  205 (225)
T ss_dssp             CSBCEEEEEEECCHHHHHHHSTT-----TCCTTEEEEECT-TCCBCCTTCTTCEEEET----TEEEEEEEECCSSSCBTT
T ss_pred             CCccEEEEEEEecHHHHhhhccC-----CcCCCEEEecCC-CCCccccCCCCceEEEc----cEEEEEEEECCCCCCCCC
Confidence            57799999999999999998875     578999999854 45789999999999995    499999999864 4    


Q ss_pred             -Cc--eeeEEEEeeccccc
Q psy13815         78 -PT--SVVQLLTRWTLDLE   93 (388)
Q Consensus        78 -~~--~~~~~~~~wi~~~~   93 (388)
                       |.  ++++.|.+||++++
T Consensus       206 ~p~vyt~V~~~~~WI~~~i  224 (225)
T d1npma_         206 KPGVYTKICRYTTWIKKTM  224 (225)
T ss_dssp             BCEEEEEHHHHHHHHHHHH
T ss_pred             CCEEEEEHHHHHHHHHHHh
Confidence             22  78888999998764

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=99.14  E-value=1.5e-11  Score=105.69  Aligned_cols=84  Identities=33%  Similarity=0.603  Sum_probs=72.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.|+++++.+++.++|+..++.     .+.+.++|++......+.|.||+|+||++..    +|+||+|++..|.    
T Consensus       136 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~c~~~~~~~~~~~~gd~G~Pl~~~~----~l~Gi~s~g~~~~~~~~  206 (228)
T d1fxya_         136 PDELQCLDAPVLSQAKCEASYPG-----KITSNMFCVGFLEGGKDSCQGDSGGPVVCNG----QLQGVVSWGDGCAQKNK  206 (228)
T ss_dssp             CSSCEEEEEEBCCHHHHHHHSTT-----TCCTTEEEESCTTCSCBCCTTCTTCEEEETT----EEEEEEEECSSSSBTTB
T ss_pred             CchhEEEEEEEeCHHHHhhhcCC-----cccceeeEeecCCCCcccccCccCccEEEeC----EEEEEEEECCCCCCCCC
Confidence            46799999999999999998865     5778899998777778999999999999964    9999999998883    


Q ss_pred             -c--eeeEEEEeeccccccC
Q psy13815         79 -T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~   95 (388)
                       .  +++..|.+||++++.+
T Consensus       207 p~vft~v~~~~~WI~~~i~~  226 (228)
T d1fxya_         207 PGVYTKVYNYVKWIKNTIAA  226 (228)
T ss_dssp             CEEEEEGGGGHHHHHHHHHH
T ss_pred             CEEEEEHHHHHHHHHHHHHh
Confidence             1  7888999999887643

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.7e-11  Score=105.47  Aligned_cols=88  Identities=26%  Similarity=0.508  Sum_probs=69.5

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec--CC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI--GS--   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~--~~--   77 (388)
                      .++.|+++.+++++.++|+..+.... ...+.++++|++...+..+.|.||+||||++..    +|+||+|+|.  +|  
T Consensus       134 ~~~~l~~~~~~~~~~~~C~~~~~~~~-~~~~~~~~~C~~~~~~~~~~c~gdsG~Pl~~~~----~l~GI~S~g~~~~c~~  208 (232)
T d1orfa_         134 WSDTLREVEITIIDRKVCNDRNHYNF-NPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEG----VFRGVTSFGLENKCGD  208 (232)
T ss_dssp             CCSBCEEEEEEEECHHHHTSTTTTTT-TTCCCTTEEEEECSSCCCBCCTTCTTCEEEETT----EEEEEEEECCTTCTTC
T ss_pred             CChhheEEEeecCCHHHHhhhhhccc-CccccCceEEeccCCCCcccccccCCCeEEEcC----EEEEEEEEECCCCCCC
Confidence            35689999999999999987654321 224778999998777778999999999999964    9999999974  35  


Q ss_pred             ---Cc--eeeE-EEEeecccccc
Q psy13815         78 ---PT--SVVQ-LLTRWTLDLEV   94 (388)
Q Consensus        78 ---~~--~~~~-~~~~wi~~~~~   94 (388)
                         |.  ++|+ .|.+||.+++.
T Consensus       209 ~~~p~vyt~Vs~~y~~WI~~~i~  231 (232)
T d1orfa_         209 PRGPGVYILLSKKHLNWIIMTIK  231 (232)
T ss_dssp             TTSCEEEEECCHHHHHHHHHHHC
T ss_pred             CCCCcEEEEeeHHHHHHHHHHhC
Confidence               22  7786 68999988764

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.12  E-value=4e-11  Score=103.30  Aligned_cols=86  Identities=34%  Similarity=0.587  Sum_probs=73.1

Q ss_pred             cCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC-----
Q psy13815          4 NILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP-----   78 (388)
Q Consensus         4 ~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~-----   78 (388)
                      ..|++..+.+++.+.|...+...    ...+.++|+....+..+.|.||+|+||++...++|+|+||+|++..|.     
T Consensus       142 ~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~~~~l~Gi~S~g~~~~~~~~p  217 (235)
T d1ekbb_         142 DVLQEADVPLLSNEKCQQQMPEY----NITENMVCAGYEAGGVDSCQGDSGGPLMCQENNRWLLAGVTSFGYQCALPNRP  217 (235)
T ss_dssp             SBCEEEEEEBCCHHHHHHHCTTS----CCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCC
T ss_pred             ccceeeEEEEecHHHhccccccc----ccCcccEEEEcCCCCcccccCCCCCccEEccCCEEEEEEEEEecCCCCCCCCC
Confidence            46899999999999998765542    467889999877777789999999999999999999999999998872     


Q ss_pred             c--eeeEEEEeeccccc
Q psy13815         79 T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~   93 (388)
                      .  +++..|++||++++
T Consensus       218 ~v~t~v~~y~~WI~~~i  234 (235)
T d1ekbb_         218 GVYARVPRFTEWIQSFL  234 (235)
T ss_dssp             EEEEEGGGTHHHHHTTC
T ss_pred             EEEEEHHHHHHHHHHhh
Confidence            2  78889999998765

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=99.11  E-value=2e-11  Score=104.48  Aligned_cols=82  Identities=37%  Similarity=0.611  Sum_probs=68.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      +..|++..|+++++++|+..+...    .+.+.++|++......+.|.||+||||++   ..|+|+||+|++..|.    
T Consensus       134 ~~~l~~~~v~~i~~~~C~~~~~~~----~~~~~~~~~~~~~~~~~~c~~dsG~pl~~---~~~~l~GI~S~g~~c~~~~~  206 (224)
T d1gdna_         134 PVNLLKVTVPIVSRATCRAQYGTS----AITNQMFCAGVSSGGKDSCQGDSGGPIVD---SSNTLIGAVSWGNGCARPNY  206 (224)
T ss_dssp             CSBCEEEEEEEECHHHHHHHHCTT----TSCTTEEEECCTTCCCBCCTTCTTCEEEC---TTCCEEEEEEECSSSSCTTC
T ss_pred             CCEeeeeEEEEeCHHHHhcccccC----ccccceeeeecCCCCccccccccCCceEe---cCCEEEEEEEeCCCCCCCCC
Confidence            467999999999999999977542    46778888876667788999999999995   3469999999999882    


Q ss_pred             -c--eeeEEEEeeccc
Q psy13815         79 -T--SVVQLLTRWTLD   91 (388)
Q Consensus        79 -~--~~~~~~~~wi~~   91 (388)
                       +  +++..|.+||++
T Consensus       207 p~vyt~v~~y~~WIe~  222 (224)
T d1gdna_         207 SGVYASVGALRSFIDT  222 (224)
T ss_dssp             CEEEEETTTTHHHHHH
T ss_pred             CEEEEEHHHHHHHHHH
Confidence             2  888899999964

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.11  E-value=2.8e-11  Score=103.40  Aligned_cols=84  Identities=26%  Similarity=0.525  Sum_probs=72.1

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      +..|+...+++++.++|++.+..     .+.+.++|++...+..+.|.||+|+||++..    +|+||+|++..|.    
T Consensus       132 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~c~~~~~~~~~~~~gd~g~pl~~~~----~L~Gi~S~g~~c~~~~~  202 (223)
T d1hj9a_         132 PDVLKCLKAPILSDSSCKSAYPG-----QITSNMFCAYGLEGKGDSCQGDSGGPVVCSG----KLQGIVSWGSGCQAKNK  202 (223)
T ss_dssp             CSSCEEEEEECCCHHHHHHHSTT-----TCCTTEEECCCCCCCCCCCTTCTTCEEEETT----EEEEEEEECSCCCCCCC
T ss_pred             CccceEEEEeecCHHHHHHHhCC-----cccccceEEeecCCCcccccCCCCceeEEeC----EEEEEEEEcCCCCCCCC
Confidence            56799999999999999998875     5788999998777778899999999999864    8999999998872    


Q ss_pred             -c--eeeEEEEeeccccccC
Q psy13815         79 -T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~~   95 (388)
                       .  +++..|.+||++++.+
T Consensus       203 p~vyt~v~~~~~WI~~~i~~  222 (223)
T d1hj9a_         203 PGVYTKVCNYVSWIKQTIAS  222 (223)
T ss_dssp             CCEEEEGGGGHHHHHHHHTT
T ss_pred             CEEEEEHHHHHHHHHHHHhc
Confidence             2  7888999999887653

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.7e-11  Score=105.18  Aligned_cols=89  Identities=30%  Similarity=0.596  Sum_probs=74.3

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ...|+.+.+.+++.+.|...+...   ....+.++|++...+..+.|.||+|+||++..+++|+|+||+|++..|.    
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~~~~l~Gi~S~~~~c~~~~~  226 (247)
T d1rjxb_         150 AGLLMEAQLPVIENKVCNRYEFLN---GRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNK  226 (247)
T ss_dssp             CSBCEEEEEEEECHHHHTSTTTTT---TCSCTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECTTSCCBBTTB
T ss_pred             CCcceEEEEEEEchHHhhhhhccC---cccccceeEEeccCCCcccccCCccceEEEeeCCEEEEEEEEEeCCCCCCCCC
Confidence            567899999999999997754321   1467889999877777899999999999999999999999999998882    


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       .  ++++.|.+||++++.
T Consensus       227 p~v~t~v~~~~~WI~~~i~  245 (247)
T d1rjxb_         227 PGVYVRVSRFVTWIEGVMR  245 (247)
T ss_dssp             CEEEEEGGGGHHHHHHHHH
T ss_pred             CEEEEEHHHHHHHHHHHHh
Confidence             2  788899999988764

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.10  E-value=1.8e-11  Score=104.81  Aligned_cols=83  Identities=31%  Similarity=0.572  Sum_probs=70.8

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      ++.|+.+.+.+++.++|+..+..     .+.++++|++...++.+.|.||+|+||++..    +|+||+|++..|.    
T Consensus       132 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~C~~~~~~~~~~c~gd~g~pl~~~~----~L~Gi~s~~~~~~~~~~  202 (223)
T d1j16a_         132 PDLLQCLDAPLLPQADCEASSSF-----IITDNMVCVGFLEGGKDACQGDSGGPVVCNG----ELQGIVSWGYGCALPDN  202 (223)
T ss_dssp             CSBCEEEEEEEECHHHHHSSSSC-----CCCTTEEEESCTTCSCBCCTTCTTCEEEETT----EEEEEEEECSSSSCTTC
T ss_pred             cceeeEEEEEEEEhhHhhccccc-----eeCCCceEEecCCCCCcccCCccCCcEEEee----EEEEEEEEccCCCCCCC
Confidence            56799999999999999986654     5788999998776778899999999999864    9999999998872    


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       .  +++..|.+||++++.
T Consensus       203 p~vft~v~~~~~WI~~~i~  221 (223)
T d1j16a_         203 PGVYTKVCNYVDWIQDTIA  221 (223)
T ss_dssp             CEEEEEGGGGHHHHHHHHH
T ss_pred             CEEEEEhHHhHHHHHHHHh
Confidence             2  788899999988764

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3.6e-11  Score=105.10  Aligned_cols=91  Identities=30%  Similarity=0.522  Sum_probs=74.5

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee----CCcEEEEeeEEeecCCC
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG----AESTQVIGLVSTGIGSP   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~----~~~~~~~Gi~s~~~~~~   78 (388)
                      +..|+.+.+++++++.|...+...   ..+.+.++|++...+..+.|.||+||||++..    .++|+|+||+||+.+|.
T Consensus       144 ~~~l~~~~~~~~~~~~C~~~~~~~---~~~~~~~~~~~~~~~~~~~c~gdsGgPl~~~~~~~~~~~~~l~Gi~S~g~~c~  220 (255)
T d1z8ga1         144 AGVLQEARVPIISNDVCNGADFYG---NQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCA  220 (255)
T ss_dssp             CSBCEEEEEEEECHHHHTSTTTTT---TCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSS
T ss_pred             cceeEEEEEEEeCHHHhhhhhccC---ccccCcceEEecCCCCcccccCccccceEEecCCCCCCcEEEEEEEEECCCCC
Confidence            567999999999999998755321   24678888887777778899999999999875    46899999999999882


Q ss_pred             -----c--eeeEEEEeeccccccCC
Q psy13815         79 -----T--SVVQLLTRWTLDLEVGG   96 (388)
Q Consensus        79 -----~--~~~~~~~~wi~~~~~~~   96 (388)
                           .  ++++.|.+||++++...
T Consensus       221 ~~~~p~vft~V~~y~~WI~~~i~~~  245 (255)
T d1z8ga1         221 LAQKPGVYTKVSDFREWIFQAIKTH  245 (255)
T ss_dssp             CTTCCEEEEEGGGGHHHHHHHHHHT
T ss_pred             CCCCCEEEEEHHHhHHHHHHHHHHc
Confidence                 2  88999999999887543

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.09  E-value=1.8e-11  Score=105.59  Aligned_cols=83  Identities=36%  Similarity=0.630  Sum_probs=70.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GS----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~----   77 (388)
                      ...|+++.++++++++|+..++.     ...+.++|++...+.++.|.||+||||++.    |+|+||+|++. .|    
T Consensus       142 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~c~~~~~~~~~~c~gdsG~Pl~~~----~~l~Gi~S~g~~~c~~~~  212 (235)
T d1tona_         142 SHDLQCVNIHLLSNEKCIETYKD-----NVTDVMLCAGEMEGGKDTCAGDSGGPLICD----GVLQGITSGGATPCAKPK  212 (235)
T ss_dssp             CSBCEEEEEEEECGGGCGGGGST-----TGGGGEEEEECTTCSCBCCTTCTTCEEEET----TEEEEEECCCCSSCSCTT
T ss_pred             cccceeeeeeeeCHHHHHHHhCC-----CCCCCceEeCcCCCCccccCCCcCCeEEEc----CEEEEEEEeCCCCCCCCC
Confidence            35799999999999999998875     467889999876777889999999999985    49999999976 34    


Q ss_pred             -Cc--eeeEEEEeecccccc
Q psy13815         78 -PT--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 -~~--~~~~~~~~wi~~~~~   94 (388)
                       |.  ++++.|.+||++++.
T Consensus       213 ~p~vyt~v~~y~~WI~~~i~  232 (235)
T d1tona_         213 TPAIYAKLIKFTSWIKKVMK  232 (235)
T ss_dssp             CCEEEEEGGGGHHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHHHH
Confidence             22  888999999988765

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.08  E-value=3.6e-11  Score=104.81  Aligned_cols=88  Identities=33%  Similarity=0.408  Sum_probs=71.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC--CC--
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG--SP--   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~--~~--   78 (388)
                      ...++...++++++.+|...+..   .......++|++. .+..+.|.||+||||++..+++|+|+||+|++..  |.  
T Consensus       154 ~~~~~~~~~~~~~~~~C~~~~~~---~~~~~~~~~c~~~-~~~~~~c~gd~G~Pl~~~~~~~~~L~Gi~S~~~~~~c~~~  229 (251)
T d1pytd_         154 AAELQQGLQPVVDYATCSQRDWW---GTTVKETMVCAGG-DGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTF  229 (251)
T ss_dssp             CSBCBCCEEECBCHHHHTSTTTT---TTTCCTTEEEECC-SCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTBT
T ss_pred             cceeceeeccccCHHHHhhhhcc---cccccCceEEecc-CCCCccccCCCCCceEEeeCCEEEEEEEEEECCCCCCCCC
Confidence            35688888999999999876542   1246788999985 4557899999999999999999999999999764  42  


Q ss_pred             ---c--eeeEEEEeecccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~~   94 (388)
                         .  ++++.|.+||++++.
T Consensus       230 ~~p~vyt~v~~y~~WI~~~i~  250 (251)
T d1pytd_         230 KKPTVFTRVSAYIDWINQKLQ  250 (251)
T ss_dssp             TBCEEEEEGGGGHHHHHHHTT
T ss_pred             CCCeEEEEHHHhHHHHHHhcc
Confidence               2  688899999998764

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.5e-11  Score=104.11  Aligned_cols=87  Identities=29%  Similarity=0.545  Sum_probs=70.1

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      ++.|+.+.+.+++.++|+..+.... .....+.++|++...+..+.|.|||||||++..    +|+||+|++..|..   
T Consensus       141 ~~~l~~~~~~~~~~~~C~~~~~~~~-~~~~~~~~~c~~~~~~~~~~C~gDsGgPl~~~~----~l~Gi~S~g~~c~~~~~  215 (240)
T d1mzaa_         141 SDTLREVTVTVLSRKLCNSQSYYNG-DPFITKDMVCAGDAKGQKDSCKGDAGGPLICKG----VFHAIVSGGHECGVATK  215 (240)
T ss_dssp             CSBCEEEEEEECCHHHHTSTTTTTT-TTCCCTTEEEEECTTSCCCCCTTCTTCEEEETT----EEEEEECSSCCSSCTTC
T ss_pred             CcccEEEEEEEecHHHhhhhhhccC-CcccccceEEeccCCCCccCccCCCCCeEEECC----EEEEEEEeCCCCCCCCC
Confidence            5679999999999999987543322 224668899998777778899999999999854    99999999998821   


Q ss_pred             ----eeeE-EEEeecccccc
Q psy13815         80 ----SVVQ-LLTRWTLDLEV   94 (388)
Q Consensus        80 ----~~~~-~~~~wi~~~~~   94 (388)
                          ++++ .|.+||++++.
T Consensus       216 p~vftrvs~~y~~WI~~~i~  235 (240)
T d1mzaa_         216 PGIYTLLTKKYQTWIKSNLV  235 (240)
T ss_dssp             CEEEEECCHHHHHHHHHHTC
T ss_pred             CeEEEEEHHHHHHHHHHHcc
Confidence                6776 57899998775

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.08  E-value=4.6e-11  Score=102.42  Aligned_cols=85  Identities=28%  Similarity=0.465  Sum_probs=70.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT--   79 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~--   79 (388)
                      .+..|+.++++++++++|...+...    .....++|++...+..+.|.||+||||++.    ++|+||+|++..|..  
T Consensus       137 ~~~~l~~~~~~~~~~~~c~~~~~~~----~~~~~~~~~~~~~~~~~~c~gdsGgPl~~~----~~l~Gi~S~g~~~~~~p  208 (227)
T d1fi8a_         137 YSDTLQEVELTVQEDQKCESYLKNY----FDKANEICAGDPKIKRASFRGDSGGPLVCK----KVAAGIVSYGQNDGSTP  208 (227)
T ss_dssp             BCSBCEEEEEEBCCHHHHHHHTTTT----CCTTTEEEESCTTSCCBCCTTCTTSEEEET----TEEEEEEEEEETTCCSC
T ss_pred             CCceeeEEEEEEEEchhhhhhhhcc----cccceeeeeeeccccCCCcCCCcCCEEEEC----CEEEEEEEEcCCCCCCC
Confidence            3678999999999999999877542    356678888776777889999999999985    499999999988842  


Q ss_pred             ---eeeEEEEeecccccc
Q psy13815         80 ---SVVQLLTRWTLDLEV   94 (388)
Q Consensus        80 ---~~~~~~~~wi~~~~~   94 (388)
                         +++..|.+||++++.
T Consensus       209 ~vyt~v~~y~~WI~~~i~  226 (227)
T d1fi8a_         209 RAFTKVSTFLSWIKKTMK  226 (227)
T ss_dssp             EEEEEGGGGHHHHHHHHC
T ss_pred             eEEEEHHHHHHHHHHHHc
Confidence               788899999988653

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.3e-10  Score=100.73  Aligned_cols=90  Identities=28%  Similarity=0.468  Sum_probs=72.3

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCC----ccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGK----KINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~----~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~   78 (388)
                      +..|+++.+++++...|...+.....    ...+...++|++  ....+.|.||+||||++..+++|+|+||+|++..|.
T Consensus       142 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gdsGgpl~~~~~~~~~L~Gi~s~~~~~~  219 (243)
T d2fpza1         142 PFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCA  219 (243)
T ss_dssp             TCBCEEEEEEEECHHHHHHHHHTTBCSCTTSCSSCTTEEEEC--CSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSSS
T ss_pred             CcEeEEEEEeecCHHHhhhhhhcccccCCccceeeeeeEecC--CCCCCCccCCCCCeEEEeeCCEEEEEEEEEECCCCC
Confidence            56799999999999999988753211    113455677776  345789999999999999999999999999998882


Q ss_pred             -----c--eeeEEEEeecccccc
Q psy13815         79 -----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -----~--~~~~~~~~wi~~~~~   94 (388)
                           .  ++++.|.+||++++.
T Consensus       220 ~~~~p~v~t~v~~y~~WI~~~i~  242 (243)
T d2fpza1         220 QPNRPGIYTRVTYYLDWIHHYVP  242 (243)
T ss_dssp             BTTBCEEEEEGGGGHHHHTTTSC
T ss_pred             CCCCCEEEEEHHHHHHHHHHHhC
Confidence                 2  788999999998763

>d2sgaa_ b.47.1.1 (A:) Protease A {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease A
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=99.07  E-value=9.5e-11  Score=96.93  Aligned_cols=43  Identities=30%  Similarity=0.424  Sum_probs=34.6

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCCCchhHH
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWI  381 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~~~~~WI  381 (388)
                      +|||||||+..+    .++||++.+..+.......+|+.|+.++++.
T Consensus       134 ~GdSGGPv~~~~----~~vGi~sgg~~~~~~~~~~~~~pv~~~l~~~  176 (181)
T d2sgaa_         134 PGDSGGSLFAGS----TALGLTSGGSGNCRTGGTTFYQPVTEALSAY  176 (181)
T ss_dssp             TTCTTCEEEETT----EEEEEEEEEEEETTTEEEEEEEEHHHHHHHH
T ss_pred             CCCcCCeeEECC----EEEEEEEEecCCCCCCceEEEEEHHHHHHHh
Confidence            899999999743    5999999987655444567999998888765

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=8.8e-11  Score=101.67  Aligned_cols=93  Identities=33%  Similarity=0.502  Sum_probs=75.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCC-ccccCCCeeEecccCCCcCCCCCCCCCceEEee--CCcEEEEeeEEeec-CC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGK-KINVKESQMCAGHEQGGKDACWADSGGPLMLLG--AESTQVIGLVSTGI-GS   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~-~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~--~~~~~~~Gi~s~~~-~~   77 (388)
                      .++.|+.+++++++.++|++.+..... ...+.+.++|++...+..+.|.||+||||++..  .++|+|+||+|++. .|
T Consensus       137 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgpl~~~~~~~~~~~l~Gi~S~g~~~c  216 (242)
T d1q3xa1         137 LARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC  216 (242)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHTSSTTSCTTCSCTTEEEECCSSCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEECCSST
T ss_pred             cccceeeeeccccCHHHHHhhhhcccccCceeccceeeeeccCCCccccccccccceEEeeCCCCeEEEEEEEEeCCCCC
Confidence            357899999999999999998865322 335678899998777778899999999999865  36899999999975 45


Q ss_pred             C-------ceeeEEEEeecccccc
Q psy13815         78 P-------TSVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 ~-------~~~~~~~~~wi~~~~~   94 (388)
                      .       .++++.|.+||++++.
T Consensus       217 ~~~~~p~vft~v~~~~~WI~~~v~  240 (242)
T d1q3xa1         217 GEAGQYGVYTKVINYIPWIENIIS  240 (242)
T ss_dssp             TCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCCCEEEEEHHHhHHHHHHHHH
Confidence            2       1788899999988653

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.06  E-value=5.2e-11  Score=102.80  Aligned_cols=88  Identities=33%  Similarity=0.428  Sum_probs=70.2

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEe-eCCcEEEEeeEEeecCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL-GAESTQVIGLVSTGIGS----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~-~~~~~~~~Gi~s~~~~~----   77 (388)
                      ++.|++++++++++.+|.+.+..   ...+...++|++. .+..+.|.||+||||++. .+++|+|+||+|++..|    
T Consensus       142 ~~~~~~~~~~~~~~~~C~~~~~~---~~~~~~~~~~~~~-~~~~~~C~gdsGgPl~~~~~~~~~~L~Gi~S~g~~~~c~~  217 (241)
T d1brup_         142 PDILQQGQLLVVDYATCSKPGWW---GSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNY  217 (241)
T ss_dssp             CSBCEEEEEEEECHHHHTSTTTT---GGGCCTTEEEECC-SSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSC
T ss_pred             CCcceEEEEEEeCHHHhCccccc---cccccccceeecC-CCCccccCCCcccceEEEcCCCCEEEEEEEEECCCCCCCC
Confidence            56799999999999999875432   1246677888874 456789999999999986 56799999999998753    


Q ss_pred             ---Cc--eeeEEEEeecccccc
Q psy13815         78 ---PT--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 ---~~--~~~~~~~~wi~~~~~   94 (388)
                         |.  ++++.|.+||++++.
T Consensus       218 ~~~p~vyt~v~~~~~WI~~~i~  239 (241)
T d1brup_         218 YHKPSVFTRVSNYIDWINSVIA  239 (241)
T ss_dssp             TTCCEEEEEGGGSHHHHHHHHH
T ss_pred             CCCCEEEEEHHHHHHHHHHHHh
Confidence               22  788899999988764

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.04  E-value=5.9e-11  Score=102.39  Aligned_cols=88  Identities=31%  Similarity=0.445  Sum_probs=71.8

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC--C---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG--S---   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~--~---   77 (388)
                      ...|+..++++++...|...+..   .....+.++|++. .+..+.|.||+|+||++..+++|+|+||+||+..  |   
T Consensus       142 ~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~c~~~-~~~~~~c~gDsG~pl~~~~~~~~~lvGI~S~~~~~~c~~~  217 (240)
T d1gvkb_         142 AQTLQQAYLPTVDYAICSSSSYW---GSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVT  217 (240)
T ss_dssp             CSBCEEEECCEECHHHHTSTTTT---GGGCCTTEEEECC-SSSCBCCTTCTTCEEEEEETTEEEEEEEEEECBTTBSSCT
T ss_pred             cceeeEEEEEEEcHHHhcceecc---CCccCCceEEecC-CCCCccccCccccceEEEECCEEEEEEEEEEcCCCCCCCC
Confidence            45789999999999999776543   2246788999986 4557899999999999999999999999999864  3   


Q ss_pred             --Cc--eeeEEEEeecccccc
Q psy13815         78 --PT--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 --~~--~~~~~~~~wi~~~~~   94 (388)
                        |.  ++++.|.+||++++.
T Consensus       218 ~~p~vyt~v~~~~~WI~~~i~  238 (240)
T d1gvkb_         218 RKPTVFTRVSAYISWINNVIA  238 (240)
T ss_dssp             TCCEEEEEGGGSHHHHHHHHH
T ss_pred             CCCEEEEEHHHhHHHHHHHHh
Confidence              22  788899999988764

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5e-11  Score=102.04  Aligned_cols=83  Identities=28%  Similarity=0.452  Sum_probs=66.4

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT--   79 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~--   79 (388)
                      .++.|+.+++.+++.++|+..+..      .....+|+.......+.|.||+||||++.    |+|+||+|++..|..  
T Consensus       135 ~~~~~~~~~~~~~~~~~C~~~~~~------~~~~~~~~~~~~~~~~~c~gDsG~PL~~~----~~l~GI~s~g~~~~~~p  204 (224)
T d1nn6a_         135 GSDTLQEVKLRLMDPQACSHFRDF------DHNLQLCVGNPRKTKSAFKGDSGGPLLCA----GVAQGIVSYGRSDAKPP  204 (224)
T ss_dssp             CCSBCEEEEEEBCCGGGGTTSTTC------CTTTEEEECCTTTC--CCCCCTTCEEEET----TEEEEEEEECCTTCCSC
T ss_pred             ccccceEEEEEecCHHHHhhhccc------ccceeeeccCccccccccCCCccceEEEC----CEEEEEEEECCCCCCCC
Confidence            357899999999999999887653      45667777655566789999999999985    499999999987732  


Q ss_pred             ---eeeEEEEeecccccc
Q psy13815         80 ---SVVQLLTRWTLDLEV   94 (388)
Q Consensus        80 ---~~~~~~~~wi~~~~~   94 (388)
                         ++++.|.+||++++.
T Consensus       205 ~vyt~v~~y~~WI~~~i~  222 (224)
T d1nn6a_         205 AVFTRISHYRPWINQILQ  222 (224)
T ss_dssp             EEEEEHHHHHHHHHHHHH
T ss_pred             eEEEEHHHHHHHHHHHHh
Confidence               788899999998764

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=98.99  E-value=9.9e-11  Score=100.15  Aligned_cols=81  Identities=26%  Similarity=0.407  Sum_probs=67.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      ...||++++++++.+.|...+..      ....++|++........|.+|+||||++.    |+|+||+|++..|..   
T Consensus       138 ~~~l~~~~~~~~~~~~C~~~~~~------~~~~~~~~~~~~~~~~~c~~d~G~Pl~~~----~~l~Gi~S~g~~~~~~p~  207 (224)
T d3rp2a_         138 SYTLREVELRIMDEKACVDYRYY------EYKFQVCVGSPTTLRAAFMGDSGGPLLCA----GVAHGIVSYGHPDAKPPA  207 (224)
T ss_dssp             CSBCEEEEEEEECGGGTTTTTCC------CTTTEEEECCTTSCCBCCTTTTTCEEEET----TEEEEEEEECCTTCCSCE
T ss_pred             cceeeEEEEEccCHHHhhhcccc------cccceeeeccCcccccCcCCCcCCeEEEc----CEEEEEEEECCCCCCCCe
Confidence            35699999999999999887653      56778888766677888999999999995    499999999987732   


Q ss_pred             --eeeEEEEeeccccc
Q psy13815         80 --SVVQLLTRWTLDLE   93 (388)
Q Consensus        80 --~~~~~~~~wi~~~~   93 (388)
                        ++++.|.+||++++
T Consensus       208 vyt~v~~~~~WI~~vi  223 (224)
T d3rp2a_         208 IFTRVSTYVPWINAVI  223 (224)
T ss_dssp             EEEEHHHHHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHh
Confidence              88889999998764

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.7e-10  Score=98.46  Aligned_cols=83  Identities=34%  Similarity=0.565  Sum_probs=67.6

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GS---   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~---   77 (388)
                      .+..|+.+.+++++.++|++.+..     .+.+.++|..........|.||+||||++..    +|+||+|+|. +|   
T Consensus       130 ~~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~~~~c~gd~G~Pl~~~~----~l~Gi~S~g~~~c~~~  200 (221)
T d1lo6a_         130 FPDTIQCAYIHLVSREECEHAYPG-----QITQNMLCAGDEKYGKDSCQGDSGGPLVCGD----HLRGLVSWGNIPCGSK  200 (221)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHSTT-----TCCTTEEEEECTTTCCBCCTTTTTCEEEETT----EEEEEEEECCSSCCCS
T ss_pred             CCccceEEEEEEecHHHHHHHcCC-----CccCCceeeeccccCCCCccCCCCCcEEECC----EEEEEEEEccCCCCCC
Confidence            357899999999999999998875     4556666665556678889999999999875    8999999976 45   


Q ss_pred             --Cc--eeeEEEEeeccccc
Q psy13815         78 --PT--SVVQLLTRWTLDLE   93 (388)
Q Consensus        78 --~~--~~~~~~~~wi~~~~   93 (388)
                        |.  +++..|.+||++++
T Consensus       201 ~~p~vyt~v~~~~~WI~~~i  220 (221)
T d1lo6a_         201 EKPGVYTNVCRYTNWIQKTI  220 (221)
T ss_dssp             SSCEEEEEGGGGHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHh
Confidence              22  78899999998765

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=3e-10  Score=97.91  Aligned_cols=87  Identities=29%  Similarity=0.427  Sum_probs=71.8

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      +..|+..+++++++..|...+..     ......+|........+.|.||+|+||++..+++|+|+||+|++..|.    
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gd~G~pl~~~~~~~~~l~Gi~s~g~~c~~~~~  220 (240)
T d1autc_         146 TFVLNFIKIPVVPHNECSEVMSN-----MVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHN  220 (240)
T ss_dssp             SSBCEEEEEEEECHHHHHHHCSS-----CCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTC
T ss_pred             ceeeecceeeEEeehhhhhhccc-----ccccceeeeccccccCCCcCCccCceeEEcCCCCEEEEEEEEeCCCCCCCCC
Confidence            45688999999999999887764     345666677655667889999999999999999999999999998872    


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       .  ++++.|.+||++++.
T Consensus       221 p~vftrv~~y~~WI~~~i~  239 (240)
T d1autc_         221 YGVYTKVSRYLDWIHGHIR  239 (240)
T ss_dssp             CEEEECGGGTHHHHHHHHC
T ss_pred             CeEEEEHHHHHHHHHHHhC
Confidence             1  788899999987653

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=98.96  E-value=3.3e-10  Score=96.47  Aligned_cols=82  Identities=30%  Similarity=0.462  Sum_probs=69.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---   78 (388)
                      .++.|+...+..++...|.+.+.      .+.+.++|++.. ...+.|.+|+|+||++.    |+|+||+|++..|.   
T Consensus       134 ~~~~~~~~~~~~~~~~~c~~~~~------~~~~~~~c~~~~-~~~~~c~~d~G~pl~~~----~~L~GI~s~~~~c~~~~  202 (222)
T d1eq9a_         134 TPNALQEIELIVHPQKQCERDQW------RVIDSHICTLTK-RGEGACHGDSGGPLVAN----GAQIGIVSFGSPCALGE  202 (222)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHSS------SCCTTEEEECCC-TTCBCCTTCTTCEEEET----TEEEEEEEECSTTTSSS
T ss_pred             CCccceEEEEEEechHHhccccc------cccCcceEeccC-CCCCccccCCcCCEEEc----CEEEEEEEECCCCCCCC
Confidence            46789999999999999988765      367889999864 45789999999999985    49999999999883   


Q ss_pred             -c--eeeEEEEeecccccc
Q psy13815         79 -T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -~--~~~~~~~~wi~~~~~   94 (388)
                       .  +++..|.+||++++.
T Consensus       203 p~vyt~v~~y~~WI~~~i~  221 (222)
T d1eq9a_         203 PDVYTRVSSFVSWINANLK  221 (222)
T ss_dssp             CEEEEEGGGGHHHHHHTSC
T ss_pred             CcEEEEHHHHHHHHHHHhc
Confidence             2  788899999988763

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=9.5e-11  Score=100.44  Aligned_cols=84  Identities=30%  Similarity=0.538  Sum_probs=66.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GS----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~----   77 (388)
                      ++.|+++.+.++++++|+..+..     ...+.++|++...+....|.+|+|+||++..    +|+||+|+|. .|    
T Consensus       135 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~G~pl~~~~----~l~Gv~S~g~~~c~~~~  205 (228)
T d1sgfa_         135 PDDLQCVNLKLLPNEDCDKAHEM-----KVTDAMLCAGEMDGGSYTCEHDSGGPLICDG----ILQGITSWGPEPCGEPT  205 (228)
T ss_dssp             -----CEEEEEECTHHHHTTCSS-----BCCTTEEEEEECSSSEEECCCCTTCEEEETT----EEEEEECCCCSSCCCSS
T ss_pred             CCccEEEEEEEeCHHHhhhhccC-----CcccceEEeccCCCCccccCCCcCCcEEEeC----EEEEEEEECCCCCCCCC
Confidence            56799999999999999887654     4567889998777778899999999999864    9999999975 45    


Q ss_pred             -Cc--eeeEEEEeeccccccC
Q psy13815         78 -PT--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        78 -~~--~~~~~~~~wi~~~~~~   95 (388)
                       |.  ++++.|.+||++++..
T Consensus       206 ~p~vyt~V~~~~~WI~~~i~~  226 (228)
T d1sgfa_         206 EPSVYTKLIKFSSWIRETMAN  226 (228)
T ss_dssp             CCEEEEESGGGHHHHHHHHHS
T ss_pred             CCeEEEEHHHHHHHHHHHHhH
Confidence             22  8899999999987754

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=98.95  E-value=3.6e-10  Score=96.53  Aligned_cols=89  Identities=30%  Similarity=0.526  Sum_probs=69.7

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEec-ccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeecCCC-
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG-HEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGIGSP-   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag-~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~~~~-   78 (388)
                      .++.|+..++++++.++|+..+...    .....++|.+ ...+..+.|.+|+|+||++.. ..+|+|+||+||+..|. 
T Consensus       124 ~~~~~~~~~~~~~~~~~C~~~~~~~----~~~~~~~~~~~~~~~~~~~c~~~~G~pl~~~~~~~~~~L~Gi~s~~~~c~~  199 (223)
T d1os8a_         124 QQRYLLKANVPFVSDAACRSAYGNE----LVANEEICAGYPDTGGVDTCQGDSGGPMFRKDNADEWIQVGIVSWGYGCAR  199 (223)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHHGGG----SCTTTEEEESCTTTCCCBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSC
T ss_pred             cccccccceeeEeCHHHhhhhhcCC----CccCcceeeeccccCCcCccccccccceEEecCCCeEEEEEEEEeCCCCCC
Confidence            3577999999999999998877642    2344555554 334557889999999999865 46999999999999883 


Q ss_pred             ------ceeeEEEEeecccccc
Q psy13815         79 ------TSVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 ------~~~~~~~~~wi~~~~~   94 (388)
                            .++++.|.+||.+++.
T Consensus       200 ~~~p~vft~V~~y~~WI~~~~k  221 (223)
T d1os8a_         200 PGYPGVYTEVSTFASAIASAAR  221 (223)
T ss_dssp             TTCCEEEEEHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEHHHHHHHHHHHHh
Confidence                  1788889999998764

>d2qaaa1 b.47.1.1 (A:16-242) Protease B {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease B
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=98.92  E-value=1.5e-09  Score=89.91  Aligned_cols=89  Identities=18%  Similarity=0.174  Sum_probs=48.0

Q ss_pred             CceeEE-EEEeeC---CEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEe
Q psy13815        138 GGHFCG-GTIIHE---QWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLEL  213 (388)
Q Consensus       138 ~~~~C~-GtLI~~---~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L  213 (388)
                      +...|+ |..+..   ++||||+||+...      ..  +.....     ....+.......+|       .+|+||||+
T Consensus        10 ~~~~CT~Gf~v~~~~~~~ilTA~Hcv~~~------~~--~~~~~~-----~~~~~g~~~~~~~~-------~~D~All~~   69 (185)
T d2qaaa1          10 STGRCSLGFNVRSGSTYYFLTAGHCTDGA------TT--WWANSA-----RTTVLGTTSGSSFP-------NNDYGIVRY   69 (185)
T ss_dssp             SSCEEECCEEEEETTEEEEEECHHHHTTC------CE--EESSTT-----SCSEEEEEEEEECS-------BSCEEEEEE
T ss_pred             CCCcEeeeEeEEECCccEEEECCCccCCC------CE--EEEEcC-----CCeEeeeEEeccCC-------CCCeEEEEe
Confidence            345698 887743   4999999999652      22  222211     11223333344455       369999999


Q ss_pred             CCCCCCCCC-eeeeeCCCCCCCCCCCeEEEEEcc
Q psy13815        214 TRSIQWSDL-IRPACLPSGSLDYSEQSVTVAGWG  246 (388)
Q Consensus       214 ~~~v~~~~~-v~picLp~~~~~~~~~~~~~~GwG  246 (388)
                      +.+...... .....+........++.+...|+.
T Consensus        70 ~~~~~~~~~~~~~~~v~~~~~~~~G~~v~~~G~~  103 (185)
T d2qaaa1          70 TNTTIPKDGTVGGQDITSAANATVGMAVTRRGST  103 (185)
T ss_dssp             CCSSSCCCSEETTEECCEECCCCTTCEEEEEETT
T ss_pred             ccCCcccccccCceeccCCCcCCCCCEEEEccCC
Confidence            876432211 111222222222567777777753

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.91  E-value=4.3e-10  Score=95.97  Aligned_cols=82  Identities=32%  Similarity=0.514  Sum_probs=66.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT---   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~---   79 (388)
                      ...++...++++++++|+..+..     .....++|........+.|.+|+||||++..    +|+||+|++..|+.   
T Consensus       137 ~~~~~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~~~~c~~dsGgpl~~~~----~l~Gi~s~g~~~~~~p~  207 (224)
T d1eufa_         137 TDKLQEVDLEVQSEEKCIARFKN-----YIPFTQICAGDPSKRKNSFSGDSGGPLVCNG----VAQGIVSYGRNDGTTPD  207 (224)
T ss_dssp             CSBCEEEEEEBCCTHHHHTTCTT-----CCTTTEEEESCTTSCCBCCTTCTTCEEEETT----EEEEEEEECCTTCCSCE
T ss_pred             cccceeeeeccCCHHHHHHHhcc-----ccccceeeeeccccccccccCCCCCeEEEcC----EEEEEEEEcCCCCCCCe
Confidence            45688999999999999887654     3445566665555667899999999999864    99999999988843   


Q ss_pred             --eeeEEEEeeccccc
Q psy13815         80 --SVVQLLTRWTLDLE   93 (388)
Q Consensus        80 --~~~~~~~~wi~~~~   93 (388)
                        ++++.|.+||++++
T Consensus       208 vft~V~~y~~WI~~~i  223 (224)
T d1eufa_         208 VYTRISSFLSWIHSTM  223 (224)
T ss_dssp             EEEEGGGTHHHHHHHT
T ss_pred             EEEEHHHHHHHHHHHh
Confidence              88999999998765

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=98.91  E-value=3.3e-10  Score=96.93  Aligned_cols=81  Identities=31%  Similarity=0.573  Sum_probs=64.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP----   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~----   78 (388)
                      +..|+++++++++.++|+..++.      ..+.++|... ...++.|.||+|+||++.    |+|+||+|++..|.    
T Consensus       135 ~~~l~~~~~~~~~~~~C~~~~~~------~~~~~~~~~~-~~~~~~c~gdsG~Pl~~~----~~l~Gi~S~g~~~~~~~~  203 (226)
T d1azza_         135 SDVLRQVDVPIMSNADCDAVYGI------VTDGNICIDS-TGGKGTCNGDSGGPLNYN----GLTYGITSFGAAAGCEAG  203 (226)
T ss_dssp             CSBCEECCEEEECHHHHHHHHSC------CCTTEEEECC-TTTCBCCTTCTTCEEEET----TEEEEEEEEEETTCTTSC
T ss_pred             ccEeEEEEEEEEeHHHhhhhhCc------ccccceeccc-cCCCccccCCcCCCEEEc----CEEEEEEEEeCCCCCCCC
Confidence            46799999999999999998864      3445555543 356789999999999985    49999999988762    


Q ss_pred             --c--eeeEEEEeecccccc
Q psy13815         79 --T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~~   94 (388)
                        .  ++++.|.+||++++.
T Consensus       204 ~p~v~t~v~~y~~WI~~~~g  223 (226)
T d1azza_         204 YPDAFTRVTYFLDWIQTQTG  223 (226)
T ss_dssp             CCEEEEESGGGHHHHHHHHC
T ss_pred             CCEEEEEHHHhHHHHHHHhC
Confidence              2  788899999998764

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=4.9e-10  Score=96.47  Aligned_cols=83  Identities=34%  Similarity=0.605  Sum_probs=69.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GS----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~----   77 (388)
                      ++.|+...+..++...|...+..     .+.+.++|++......+.|.||+|+||++..    +|+||+|+|. .|    
T Consensus       144 ~~~~~~~~~~~~~~~~c~~~~~~-----~~~~~~~~~~~~~~~~~~c~gdsG~pl~~~~----~l~Gi~S~g~~~c~~~~  214 (237)
T d1ao5a_         144 PDDLQCVFITLLPNENCAKVYLQ-----KVTDVMLCAGEMGGGKDTCRDDSGGPLICDG----ILQGTTSYGPVPCGKPG  214 (237)
T ss_dssp             CSBCEEEEEEEECHHHHHHHCSS-----CCCTTEEEEECTTCSCBCCTTCTTCEEEETT----EEEEEEEECCSSTTCTT
T ss_pred             CccceeeEEEEEehHHhhhhhcC-----CCCCCeEEEccCCCCCcccCCCCCCeeEEcc----EEEEEEEEecCCCCCCC
Confidence            56788999999999999987765     5788899998666667899999999999854    9999999976 35    


Q ss_pred             -Cc--eeeEEEEeecccccc
Q psy13815         78 -PT--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 -~~--~~~~~~~~wi~~~~~   94 (388)
                       |.  ++++.|.+||++++.
T Consensus       215 ~p~vft~V~~y~~WI~~~i~  234 (237)
T d1ao5a_         215 VPAIYTNLIKFNSWIKDTMM  234 (237)
T ss_dssp             CCEEEECGGGGHHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHHHH
Confidence             22  788999999998764

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=7.2e-10  Score=96.77  Aligned_cols=91  Identities=25%  Similarity=0.378  Sum_probs=70.0

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcC----CCccccCCCeeEecccCCCcCCCCCCCCCceEEee---CCcEEEEeeEEeec
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSE----GKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG---AESTQVIGLVSTGI   75 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~----~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~---~~~~~~~Gi~s~~~   75 (388)
                      ...|+.+.+++++...|...+...    .....+.+.++|++.. .+.+.|.||+||||++..   .++|+|+||+|++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~c~gDsGgPl~~~~~~~~~~~~l~Gi~S~~~  233 (259)
T d1elva1         155 AVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGE-KGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGP  233 (259)
T ss_dssp             CSBCEEEEEEEECHHHHHTC----------CCCCCTTEEEEECS-TTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECS
T ss_pred             ccccccceeeEechhhceeeeecccccccccceeecceeeccCC-CCCccCCCCcCCeEEEEecCCCcEEEEEEEEEeCC
Confidence            456899999999999997755321    1122367888999864 557899999999999864   35899999999999


Q ss_pred             CCCc----eeeEEEEeecccccc
Q psy13815         76 GSPT----SVVQLLTRWTLDLEV   94 (388)
Q Consensus        76 ~~~~----~~~~~~~~wi~~~~~   94 (388)
                      +|..    ++++.|.+||.+++.
T Consensus       234 ~c~~p~vft~V~~~~~WI~~~i~  256 (259)
T d1elva1         234 QCGTYGLYTRVKNYVDWIMKTMQ  256 (259)
T ss_dssp             STTSEEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCceEEeEHHHHHHHHHHHHH
Confidence            9843    889999999988764

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=1.3e-09  Score=94.53  Aligned_cols=94  Identities=29%  Similarity=0.437  Sum_probs=68.8

Q ss_pred             ceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC-----c-
Q psy13815          6 LQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP-----T-   79 (388)
Q Consensus         6 L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~-----~-   79 (388)
                      .+.....+.....|................++|+....+....|.||+||||++..+++|+|+||+||+..|.     . 
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPl~~~~~~~~~lvGi~S~g~~c~~~~~p~v  224 (254)
T d2bz6h1         145 LMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGV  224 (254)
T ss_dssp             CEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEE
T ss_pred             ceeeeecccchhhhhhhhhcccccccccccceeeeccCCCcccccCccccceEEccCCeEEEEEEEEeCCCCCCCCCCEE
Confidence            4445555566555544332222223456777888766667889999999999999999999999999998883     1 


Q ss_pred             -eeeEEEEeeccccccCCCCC
Q psy13815         80 -SVVQLLTRWTLDLEVGGSSP   99 (388)
Q Consensus        80 -~~~~~~~~wi~~~~~~~~~~   99 (388)
                       ++++.|.+||++++...+.|
T Consensus       225 ytrv~~~~~WI~~~i~~~~~~  245 (254)
T d2bz6h1         225 YTRVSQYIEWLQKLMRSEPRP  245 (254)
T ss_dssp             EEEGGGGHHHHHHHHTSCCCS
T ss_pred             EEEHHHHHHHHHHHHhhCCCC
Confidence             78889999999988765543

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.84  E-value=1.2e-09  Score=93.60  Aligned_cols=88  Identities=31%  Similarity=0.444  Sum_probs=69.5

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEee-CCcEEEEeeEEeecC--CC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG-AESTQVIGLVSTGIG--SP   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~-~~~~~~~Gi~s~~~~--~~   78 (388)
                      .++.|+.+++++++.+.|.+.+..   ...+...++|++.  .....|.||+||||++.. +++|+|+||+|++.+  |.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~c~~~--~~~~~~~gdsGgpl~~~~~~~~~~L~Gi~s~~~~~~c~  207 (232)
T d1fona_         133 LPDKLQQALLPTVDYEHCSQWDWW---GITVKKTMVCAGG--DTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCN  207 (232)
T ss_dssp             CCSBCEEEECCEECHHHHTSTTTT---GGGCCTTEEEECC--SSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSS
T ss_pred             CCCcceEEEEEEEcHHHhhhhhcc---Cceeeeceeeecc--ccccccccCCCCceEEEccCCCEEEEEEEEEcCCCCCC
Confidence            356799999999999999875532   2246788999974  346789999999999864 578999999998754  52


Q ss_pred             -----c--eeeEEEEeecccccc
Q psy13815         79 -----T--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        79 -----~--~~~~~~~~wi~~~~~   94 (388)
                           .  ++++.|.+||++++.
T Consensus       208 ~~~~p~vyt~V~~y~~WI~~~i~  230 (232)
T d1fona_         208 TIKKPTVFTRVSAFIDWIDETIA  230 (232)
T ss_dssp             BTTBCEEEEEGGGSHHHHHHHHH
T ss_pred             CCCCCEEEEEHHHHHHHHHHHHH
Confidence                 1  788899999988764

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=98.82  E-value=1.6e-09  Score=92.85  Aligned_cols=85  Identities=32%  Similarity=0.444  Sum_probs=66.5

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec--CC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI--GS---   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~--~~---   77 (388)
                      ...|+++.+.+++.++|......   .......++|+..  ...+.|.||+||||++..+++|+|+||+|++.  +|   
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~c~gdsGgpl~~~~~~~~~l~GI~s~~~~~~c~~~  216 (236)
T d1elta_         142 SDSLKQAWLPSVDHATCSSSGWW---GSTVKTTMVCAGG--GANSGCNGDSGGPLNCQVNGSYYVHGVTSFVSSSGCNAS  216 (236)
T ss_dssp             CSBCEEEECCEECHHHHTSTTTT---GGGSCTTEEEECC--SSCBCCTTCTTCEEEEEETTEEEEEEEEEECCSSCTTCT
T ss_pred             CccceeeeeEEEcHHHhhhhccc---ccccceeeeecCC--ccccccccccccceEEEECCeEEEEEEEEEeCCCCCCCC
Confidence            46789999999999999775432   1134566777753  34688999999999999999999999999864  45   


Q ss_pred             --Cc--eeeEEEEeecccc
Q psy13815         78 --PT--SVVQLLTRWTLDL   92 (388)
Q Consensus        78 --~~--~~~~~~~~wi~~~   92 (388)
                        |.  ++++.|.+||+++
T Consensus       217 ~~p~vyt~v~~y~~WI~~v  235 (236)
T d1elta_         217 KKPTVFTRVSAYISWMNGI  235 (236)
T ss_dssp             TCCEEEEEGGGGHHHHHHH
T ss_pred             CCCEEEEEHHHHHHHHHHh
Confidence              22  7888999999875

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=98.80  E-value=5.1e-10  Score=96.27  Aligned_cols=83  Identities=30%  Similarity=0.461  Sum_probs=68.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-C----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-S----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~----   77 (388)
                      +..|+++.+++++.+.|...++.     ...+.++|+....+..+.|.||+||||++..    +|+||+|++.. |    
T Consensus       144 ~~~l~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~~----~l~Gv~s~g~~~c~~~~  214 (237)
T d1gvza_         144 SGTLQCVELRLQSNEKCARAYPE-----KMTEFVLCATHRDDSGSICLGDSGGALICDG----VFQGITSWGYSECADFN  214 (237)
T ss_dssp             EEEEEEEEEEEECGGGGCSSCGG-----GCCTTEEEEECSSTTCEECGGGTTCEEEETT----EEEEEECCCSSSCEETT
T ss_pred             cceeeEEEEEeecHHHHHhhccc-----ccccccccceecccccccccCCCCCcEEEcC----EEEEEEEeccCCCCCCC
Confidence            45699999999999999988765     4667788877666678899999999999964    99999999764 4    


Q ss_pred             -Cc--eeeEEEEeecccccc
Q psy13815         78 -PT--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 -~~--~~~~~~~~wi~~~~~   94 (388)
                       |.  ++++.|.+||++++.
T Consensus       215 ~p~v~t~v~~y~~WI~~~i~  234 (237)
T d1gvza_         215 DNFVFTKVMPHKKWIKETIE  234 (237)
T ss_dssp             TSCCEEESGGGHHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHHHH
Confidence             22  889999999988764

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=98.76  E-value=5.3e-09  Score=89.81  Aligned_cols=89  Identities=31%  Similarity=0.545  Sum_probs=68.1

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec----CC
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI----GS   77 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~----~~   77 (388)
                      .+..|+.+.+++++.++|++.+...... ......+|++......+.|.||+||||++. ++.++++||+++..    .|
T Consensus       141 ~~~~~~~~~~~~~~~~~C~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~sGgpl~~~-~~~~~l~Gi~s~~~~~g~~~  218 (241)
T d1m9ua_         141 LPDILQKSSIPVITTAQCTAAMVGVGGA-NIWDNHICVQDPAGNTGACNGDSGGPLNCP-DGGTRVVGVTSWVVSSGLGA  218 (241)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHTTSTTC-CCCTTEEEECCTTSCCBCCTTCTTCEEEEE-SSSEEEEEEEEECCBCTTSC
T ss_pred             CCCcceEEEEEeechhHhhhhhhccccc-ccccceeEeecccCCcCcccCCCCcceEEe-cCCEEEEEEEEEEEcCCCCC
Confidence            3577999999999999999987653322 345666777666667899999999999976 45688999998653    23


Q ss_pred             -----Cc--eeeEEEEeecccc
Q psy13815         78 -----PT--SVVQLLTRWTLDL   92 (388)
Q Consensus        78 -----~~--~~~~~~~~wi~~~   92 (388)
                           |.  ++|+.|.+||++.
T Consensus       219 ~~~~~p~vft~V~~y~~WI~~n  240 (241)
T d1m9ua_         219 CLPDYPSVYTRVSAYLGWIGDN  240 (241)
T ss_dssp             BCTTSCEEEEEGGGTHHHHHHH
T ss_pred             CCCCCCEEEEEHHHhHHHHHHc
Confidence                 22  8899999999754

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.3e-10  Score=96.95  Aligned_cols=84  Identities=25%  Similarity=0.383  Sum_probs=66.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCC---c
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSP---T   79 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~---~   79 (388)
                      +..|+++++.++++++|+..+...    .....+.|........+.|.||+||||++.    ++|+||+|++..|.   .
T Consensus       137 ~~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~----~~l~GI~s~g~~~~~~p~  208 (227)
T d1fq3a_         137 SHTLQEVKMTVQEDRKCESDLRHY----YDSTIELCVGDPEIKKTSFKGDSGGPLVCN----KVAQGIVSYGRNNGMPPR  208 (227)
T ss_dssp             CSBCCBCEEECCCHHHHTTTCTTT----CCTTTEECCSCTTSSCBCCTTCTTCBCBSS----SSCCCEECCCCTTSCSCC
T ss_pred             cccceEEEEEEEcHHHhhhhhccc----ccccceeeeeccccccccccCCCCceEEEe----CEEEEEEEEcCCCCCCCc
Confidence            567999999999999998876542    233445555545667889999999999985    48999999998773   2


Q ss_pred             --eeeEEEEeecccccc
Q psy13815         80 --SVVQLLTRWTLDLEV   94 (388)
Q Consensus        80 --~~~~~~~~wi~~~~~   94 (388)
                        ++++.|.+||++++.
T Consensus       209 vyt~v~~y~~WI~~~i~  225 (227)
T d1fq3a_         209 ACTKVSSFVHWIKKTMK  225 (227)
T ss_dssp             CEECHHHHHHHHHHHTT
T ss_pred             EEEEHHHHHHHHHHHHH
Confidence              889999999988764

>d1l1ja_ b.47.1.1 (A:) Protease Do (DegP, HtrA), catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease Do (DegP, HtrA), catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=98.71  E-value=6.7e-08  Score=82.35  Aligned_cols=85  Identities=19%  Similarity=0.124  Sum_probs=52.6

Q ss_pred             eeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        140 HFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       140 ~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ...+|.+|+++ ||||++|++.+      ...+.|.....       ..+..+-+...+       ..|+|||++..+- 
T Consensus        56 s~GSGfiI~~~G~IlTn~HVv~~------~~~~~v~~~~~-------~~~~a~v~~~~~-------~~dlall~v~~~~-  114 (228)
T d1l1ja_          56 SLGSGFIFDPEGYILTNYHVVGG------ADNITVTMLDG-------SKYDAEYIGGDE-------ELDIAVIKIKASD-  114 (228)
T ss_dssp             EEEEEEEEETTTEEEEEHHHHSS------CSSCEEECTTS-------CEEEBCCCEEET-------TTTEEEEEBCCSS-
T ss_pred             cceEEEEeecCceEEeecccccc------cccceEEeecc-------eeEeEEEeeecc-------cccceeeEeecCC-
Confidence            36899999987 99999999976      23334433221       111111112222       4699999997542 


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEccc
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGWGW  247 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~GwG~  247 (388)
                        ....++.|........++.+.++|+..
T Consensus       115 --~~~~~l~l~~s~~~~~G~~V~aiG~P~  141 (228)
T d1l1ja_         115 --KKFPYLEFGDSDKVKIGEWAIAIGNPL  141 (228)
T ss_dssp             --SCCCCCEECCGGGCCTTCEEEEEECTT
T ss_pred             --CCCceEEccCccccccCCcEEEEECCC
Confidence              234556665443336789999999854

>d2h5ca1 b.47.1.1 (A:15A-245) alpha-Lytic protease {Lysobacter enzymogenes, 495 [TaxId: 69]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: alpha-Lytic protease
species: Lysobacter enzymogenes, 495 [TaxId: 69]

Probab=98.71  E-value=7.1e-08  Score=80.29  Aligned_cols=23  Identities=35%  Similarity=0.547  Sum_probs=19.1

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecC
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGI  360 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~  360 (388)
                      +|||||||+...+   .++||+|.+.
T Consensus       140 ~GdSGGPv~~~~g---~vvGI~sgg~  162 (198)
T d2h5ca1         140 RGDSGGSWITSAG---QAQGVMSGGN  162 (198)
T ss_dssp             TTCTTCEEECTTC---BEEEEEEEEC
T ss_pred             cccccccEEcCCC---EEEEEEcccc
Confidence            9999999996543   4999999865

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=98.71  E-value=4.7e-09  Score=89.68  Aligned_cols=85  Identities=33%  Similarity=0.547  Sum_probs=67.3

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCC-----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGS-----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~-----   77 (388)
                      ...|+.+.+..++.++|...+...    ...+.++|+.. ....+.|.||+|+||++.  ++|+|+||+|++.++     
T Consensus       135 ~~~~~~~~~~~~~~~~c~~~~~~~----~~~~~~~~~~~-~~~~~~~~gdsGgp~~~~--~~~~l~Gi~S~~~~~~~~~~  207 (230)
T d2hlca_         135 TVILQYTYNLVIDNDRCAQEYPPG----IIVESTICGDT-SDGKSPCFGDSGGPFVLS--DKNLLIGVVSFVSGAGCESG  207 (230)
T ss_dssp             CCBCEEEEEEEECHHHHHTTSCTT----SSCTTEEEECC-TTSCBCCTTCTTCEEEEG--GGTEEEEEEEECCTTCTTSC
T ss_pred             chhhheeeeccccchhhhhccccc----cccccceEecc-ccCccccccccCCCeEEC--CCeEEEEEEEEeCCCCCCCC
Confidence            456899999999999998766431    35577888864 455788999999999985  467999999987653     


Q ss_pred             -Cc--eeeEEEEeecccccc
Q psy13815         78 -PT--SVVQLLTRWTLDLEV   94 (388)
Q Consensus        78 -~~--~~~~~~~~wi~~~~~   94 (388)
                       |.  ++++.|.+||++++.
T Consensus       208 ~p~vyt~V~~y~~WI~~~~~  227 (230)
T d2hlca_         208 KPVGFSRVTSYMDWIQQNTG  227 (230)
T ss_dssp             CCEEEEEGGGGHHHHHHHHC
T ss_pred             CCeEEEEhHHhHHHHHHHhC
Confidence             22  888999999998764

>d1lcya2 b.47.1.1 (A:6-210) Mitochondrial serine protease HtrA2, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Mitochondrial serine protease HtrA2, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=1e-07  Score=79.86  Aligned_cols=83  Identities=20%  Similarity=0.208  Sum_probs=52.8

Q ss_pred             eEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCCC
Q psy13815        141 FCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQW  219 (388)
Q Consensus       141 ~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~  219 (388)
                      .-+|.+|+++ +|||++|++.+      ...+.|....       ...+..+-+..+|       ..|+|||+++.+-. 
T Consensus        43 ~GSGf~i~~~G~IlT~~HVv~~------~~~i~V~~~~-------g~~~~a~vv~~d~-------~~dlall~~~~~~~-  101 (205)
T d1lcya2          43 NGSGFVVAADGLIVTNAHVVAD------RRRVRVRLLS-------GDTYEAVVTAVDP-------VADIATLRIQTKEP-  101 (205)
T ss_dssp             EEEEEEEETTTEEEECHHHHTT------CSEEEEECTT-------SCEEEEEEEEEET-------TTTEEEEECCCSSC-
T ss_pred             ceEEEEEECCCeEEEechhhhh------hhhccccccc-------cccccceeeeeec-------ceeeEEEEecCCCC-
Confidence            5789999987 99999999976      3455554432       1223333333343       46999999876533 


Q ss_pred             CCCeeeeeCCCCCCCCCCCeEEEEEccc
Q psy13815        220 SDLIRPACLPSGSLDYSEQSVTVAGWGW  247 (388)
Q Consensus       220 ~~~v~picLp~~~~~~~~~~~~~~GwG~  247 (388)
                         +.++.|........++.++++|+..
T Consensus       102 ---~~~l~l~~~~~~~~G~~v~~iG~P~  126 (205)
T d1lcya2         102 ---LPTLPLGRSADVRQGEFVVAMGSPF  126 (205)
T ss_dssp             ---CCCCCBCCGGGCCTTCEEEECCCTT
T ss_pred             ---CcEEEccccccCCCCCEEEEEECCc
Confidence               3455554433335678888877743

>d2z9ia2 b.47.1.1 (A:6-226) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease PepD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.68  E-value=2.4e-08  Score=84.89  Aligned_cols=103  Identities=20%  Similarity=0.227  Sum_probs=58.8

Q ss_pred             cceEEEEccCC---ceeEEEEEeeCC-EEEecCcCCCCCC---CCCccceEEEEeccccCCCCceeeeceEEEEECCCCC
Q psy13815        128 FPWIVSLKRHG---GHFCGGTIIHEQ-WIVTAAHCLCNGP---SPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHS  200 (388)
Q Consensus       128 ~Pw~v~i~~~~---~~~C~GtLI~~~-~VLTAAhCv~~~~---~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~  200 (388)
                      -|.+|.|....   ....+|.+|+++ +|||+||++.+..   .......+.|.+...       ..+...-+...+   
T Consensus        11 ~~svV~I~~~~~~~~~~GSGfvi~~~G~IlTn~HVV~~~~~~~~~~~~~~i~v~~~dg-------~~~~a~vi~~d~---   80 (221)
T d2z9ia2          11 VPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDG-------RTAPFTVVGADP---   80 (221)
T ss_dssp             GGGEEEEEEEC----CEEEEEECCTTSEEEECHHHHHHHHCCC------EEEEEETTS-------CEECCEEEEEET---
T ss_pred             CCcEEEEEeccCCcCcceEEEEEECCCEEEEcHHHhhccccccccccCceEEEEcCCc-------eeeeeeeEeecc---
Confidence            36678886432   457899999987 9999999985411   112233444554321       233333333333   


Q ss_pred             CCCCCCcEEEEEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEcccc
Q psy13815        201 CSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWT  248 (388)
Q Consensus       201 ~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~~  248 (388)
                          ..|||||++..+.....   +..+..... ..+..+..+|+...
T Consensus        81 ----~~DlAll~~~~~~~~~~---~~~~~~~~~-~~g~~v~~~g~p~g  120 (221)
T d2z9ia2          81 ----TSDIAVVRVQGVSGLTP---ISLGSSSDL-RVGQPVLAIGSPLG  120 (221)
T ss_dssp             ----TTTEEEEECCSCCSCCC---CEECCGGGC-CTTCEEEEEECGGG
T ss_pred             ----ccceeeeeeccccccee---ecccccccc-ccCceeeeeeccCC
Confidence                46999999987754221   112222222 67888888887643

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=6.3e-09  Score=88.44  Aligned_cols=83  Identities=24%  Similarity=0.429  Sum_probs=63.7

Q ss_pred             CCcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecC-CC--
Q psy13815          2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIG-SP--   78 (388)
Q Consensus         2 ~s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~-~~--   78 (388)
                      .+..|++..+++++.++|...+...    .....++|+.. ....+.|.||+|+||++.    |+|+||+|++.. |.  
T Consensus       137 ~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~gdsG~Pl~~~----~~LvGi~S~g~~~c~~~  207 (228)
T d1bioa_         137 RPDSLQHVLLPVLDRATCNRRTHHD----GAITERLMCAE-SNRRDSCKGDSGGPLVCG----GVLEGVVTSGSRVCGNR  207 (228)
T ss_dssp             CCSBCEEEEEEEECHHHHHSTTTTT----TCCCTTEEEEC-CSSCBCCTTTTTCEEEET----TEEEEEECCSCCCSSCT
T ss_pred             CCCcceEEEEEEeCHHHHhhhhccc----ccccccceeec-ccCCCcccCCcCccEEEc----CEEEEEEEECCCCCCCC
Confidence            3567999999999999998866432    23455566653 355789999999999985    499999999753 52  


Q ss_pred             ---c--eeeEEEEeeccccc
Q psy13815         79 ---T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 ---~--~~~~~~~~wi~~~~   93 (388)
                         .  +++..|.+||++++
T Consensus       208 ~~p~v~t~v~~~~~WI~~~i  227 (228)
T d1bioa_         208 KKPGIYTRVASYAAWIDSVL  227 (228)
T ss_dssp             TSCEEEEEGGGGHHHHHHHH
T ss_pred             CCCEEEEEHHHHHHHHHHHh
Confidence               1  78889999998764

>d2qf3a1 b.47.1.1 (A:43-252) Stress sensor protease DegS, catalytic domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Stress sensor protease DegS, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=98.65  E-value=3.1e-07  Score=77.05  Aligned_cols=85  Identities=19%  Similarity=0.271  Sum_probs=54.7

Q ss_pred             eeEEEEEeeCC-EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCCC
Q psy13815        140 HFCGGTIIHEQ-WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ  218 (388)
Q Consensus       140 ~~C~GtLI~~~-~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~  218 (388)
                      ..-+|.+|+++ +|||++|.+.+      ...+.|.+...       ..+...-+..++       .+|+|||++..+..
T Consensus        36 s~GSGfvi~~~G~IlTn~HVV~~------~~~i~v~~~~~-------~~~~~~~~~~~~-------~~Dlall~~~~~~~   95 (210)
T d2qf3a1          36 TLGSGVIMDQRGYIITNKHVIND------ADQIIVALQDG-------RVFEALLVGSDS-------LTDLAVLKINATGG   95 (210)
T ss_dssp             EEEEEEECSTTCEEEEEHHHHTT------CSEEEEECTTS-------CEEECEEEEEET-------TTTEEEEECCCSSC
T ss_pred             cceEEEEEECCceEEechhhccc------ccccccccccc-------cceeeEEecccc-------ccchhheecccccc
Confidence            36899999977 99999999965      45566654321       233333344443       46999999987644


Q ss_pred             CCCCeeeeeCCCCCCCCCCCeEEEEEcccc
Q psy13815        219 WSDLIRPACLPSGSLDYSEQSVTVAGWGWT  248 (388)
Q Consensus       219 ~~~~v~picLp~~~~~~~~~~~~~~GwG~~  248 (388)
                      +    .+..+........+..+...|+...
T Consensus        96 ~----~~~~~~~~~~~~~g~~v~~~G~p~~  121 (210)
T d2qf3a1          96 L----PTIPINARRVPHIGDVVLAIGNPYN  121 (210)
T ss_dssp             C----CCCCCCTTCCCCTTBEEEEEECGGG
T ss_pred             c----cccccccccccccceEEEEeccccc
Confidence            2    2333333333367888888888643

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=98.64  E-value=1.8e-08  Score=86.12  Aligned_cols=87  Identities=36%  Similarity=0.573  Sum_probs=67.7

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GS----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~----   77 (388)
                      ...|+.+.+.+++..+|...+...    ...+.++|.....+..+.|.||+|+||++..    +|+||+|++. .|    
T Consensus       134 ~~~~~~~~~~~~~~~~C~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~G~Pl~~~~----~l~Gi~S~g~~~c~~~~  205 (234)
T d1op0a_         134 PDVPYCANINLLDHAVCQAGYPEL----LAEYRTLCAGIVQGGKDTCGGDSGGPLICNG----QFQGIVSYGAHPCGQGP  205 (234)
T ss_dssp             CSSCEEEEEEEECHHHHHHHCTTC----CTTSCEEEEECTTCCCBCCTTCTTCEEEETT----EEEEEEEECCSSTTCTT
T ss_pred             ccccccccceEechHHhcccccCc----ceeeeeeeecccccccccccCCCCceEEEcC----EEEEEEEEcCCCCCCCC
Confidence            356899999999999999877642    2344566665556678899999999999864    9999999975 44    


Q ss_pred             -Cc--eeeEEEEeeccccccCCC
Q psy13815         78 -PT--SVVQLLTRWTLDLEVGGS   97 (388)
Q Consensus        78 -~~--~~~~~~~~wi~~~~~~~~   97 (388)
                       |.  ++++.|.+||.+++.+..
T Consensus       206 ~p~vft~v~~y~~WI~~~i~~~~  228 (234)
T d1op0a_         206 KPGIYTNVFDYTDWIQRNIAGNT  228 (234)
T ss_dssp             SCEEEEESGGGHHHHHHHHHTCT
T ss_pred             CCeEEEEHHHHHHHHHHHHhhcC
Confidence             22  788999999999886543

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.3e-08  Score=84.87  Aligned_cols=76  Identities=24%  Similarity=0.444  Sum_probs=61.1

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCC----C
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGS----P   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~----~   78 (388)
                      .+.|+.+.+++++.+.|..             ...|++......+.|.||+|+||++.    |+|+||+|++..|    |
T Consensus       138 ~~~l~~~~~~~~~~~~C~~-------------~~~~~~~~~~~~~~c~gdsG~Pl~~~----~~l~Gi~S~~~~~c~~~p  200 (225)
T d1a7sa_         138 SRFPRFVNVTVTPEDQCRP-------------NNVCTGVLTRRGGICNGDGGTPLVCE----GLAHGVASFSLGPCGRGP  200 (225)
T ss_dssp             CSSCEEEEEEECCGGGSCT-------------TEEEEECSSSSCBCCTTCTTCEEEET----TEEEEEEEEECSSTTSSC
T ss_pred             ccceeEEEEEEeehhhccc-------------ccceeeecccccccccCCCCCCEEEe----CEEEEEEEECCCCCCCCC
Confidence            4679999999999999943             23455555566789999999999995    4999999998854    2


Q ss_pred             c--eeeEEEEeeccccccC
Q psy13815         79 T--SVVQLLTRWTLDLEVG   95 (388)
Q Consensus        79 ~--~~~~~~~~wi~~~~~~   95 (388)
                      .  ++++.|.+||++++..
T Consensus       201 ~v~t~v~~y~~WI~~~i~~  219 (225)
T d1a7sa_         201 DFFTRVALFRDWIDGVLNN  219 (225)
T ss_dssp             EEEEEGGGGHHHHHHHHHS
T ss_pred             CEEEEHHHHHHHHHHHHCC
Confidence            2  7888999999998763

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.7e-08  Score=83.92  Aligned_cols=73  Identities=26%  Similarity=0.539  Sum_probs=55.1

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CCC---
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GSP---   78 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~~---   78 (388)
                      +..|+++++++++. .|.             ..+.|+.......+.|.||+||||++..    +|+||+||+. +|.   
T Consensus       137 ~~~l~~~~~~~~~~-~c~-------------~~~~~~~~~~~~~~~C~gdsG~Pl~~~~----~l~GI~s~~~~~c~~~~  198 (218)
T d2z7fe1         137 ASVLQELNVTVVTS-LCR-------------RSNVCTLVRGRQAGVCFGDSGSPLVCNG----LIHGIASFVRGGCASGL  198 (218)
T ss_dssp             CSBCEEEEEEEECT-TCC-------------TTSEEEECTTSCCBCCTTCTTCEEEETT----EEEEEEEEESSSTTCSS
T ss_pred             ccceeEEEeccccc-ccc-------------eeeeeeeecCcccCccccccCCCEEECC----EEEEEEEEecCCCCCCC
Confidence            46789999988874 453             3456665444556789999999999964    9999999974 452   


Q ss_pred             --c--eeeEEEEeeccccc
Q psy13815         79 --T--SVVQLLTRWTLDLE   93 (388)
Q Consensus        79 --~--~~~~~~~~wi~~~~   93 (388)
                        .  ++++.|.+||+++.
T Consensus       199 ~p~vft~v~~~~~WI~~~i  217 (218)
T d2z7fe1         199 YPDAFAPVAQFVNWIDSII  217 (218)
T ss_dssp             SCEEEEEGGGGHHHHHHHH
T ss_pred             cCEEEEEhHHhHHHHHHHh
Confidence              2  78889999998764

>d1ky9a2 b.47.1.1 (A:11-259) Protease Do (DegP, HtrA), catalytic domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease Do (DegP, HtrA), catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=98.48  E-value=1.3e-06  Score=75.09  Aligned_cols=84  Identities=20%  Similarity=0.293  Sum_probs=57.3

Q ss_pred             eeEEEEEeeCC--EEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEEEEeCCCC
Q psy13815        140 HFCGGTIIHEQ--WIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSI  217 (388)
Q Consensus       140 ~~C~GtLI~~~--~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v  217 (388)
                      ..-+|.+|+++  +|||.+|.+.+      ...+.|.+...       ..+..+.+...+       ..|+|||+++.+-
T Consensus        76 ~~GSG~iI~~~~g~IlTn~HVv~~------~~~~~v~~~~~-------~~~~a~~~~~d~-------~~dlavl~i~~~~  135 (249)
T d1ky9a2          76 ALGSGVIIDADKGYVVTNNHVVDN------ATVIKVQLSDG-------RKFDAKMVGKDP-------RSDIALIQIQNPK  135 (249)
T ss_dssp             EEEEEEEEETTTTEEEEEHHHHTT------EEEEEEEETTS-------CEEEEEEEEEET-------TTTEEEEEESSCC
T ss_pred             ccccEEEEeccCceEEeecccccc------ceeeeeeeccc-------ccccceeeEecc-------chhhceeeecccc
Confidence            45789999854  99999999965      45556655432       234454445444       3699999998653


Q ss_pred             CCCCCeeeeeCCCCCCCCCCCeEEEEEccc
Q psy13815        218 QWSDLIRPACLPSGSLDYSEQSVTVAGWGW  247 (388)
Q Consensus       218 ~~~~~v~picLp~~~~~~~~~~~~~~GwG~  247 (388)
                      .    +.|+.|........++.+.++|+-.
T Consensus       136 ~----~~~~~l~~~~~~~~G~~v~aiG~P~  161 (249)
T d1ky9a2         136 N----LTAIKMADSDALRVGDYTVAIGNPF  161 (249)
T ss_dssp             S----CCCCCBCCGGGCCTTCEEEEEECTT
T ss_pred             c----ceEEEcCCcCcCCcCCEEEEEeccc
Confidence            3    4566676554446789999999753

>d1lvmb_ b.47.1.3 (B:) TEV protease (nucleat inclusion protein A, NIA) {Tobacco etch virus, TEV [TaxId: 12227]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Viral proteases
domain: TEV protease (nucleat inclusion protein A, NIA)
species: Tobacco etch virus, TEV [TaxId: 12227]

Probab=98.28  E-value=8.1e-06  Score=68.42  Aligned_cols=45  Identities=13%  Similarity=0.319  Sum_probs=33.1

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCCCCCCCCCeEEEeCC-CchhHHhhh
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLT-RYIGWISDT  384 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~c~~~~~p~v~t~V~-~~~~WI~~~  384 (388)
                      +|+|||||+-..+|  .|+||.+.+..-.   .-.+|+.|. .++++|.+.
T Consensus       146 ~GnSGGPlvd~~dG--~VVGIhs~~~~~~---~~n~~~~i~~~~~~~l~~~  191 (219)
T d1lvmb_         146 DGQCGSPLVSTRDG--FIVGIHSASNFTN---TNNYFTSVPKNFMELLTNQ  191 (219)
T ss_dssp             TTCTTCEEEETTTC--CEEEEEEEEETTS---SSEEEEECCTTHHHHHHCG
T ss_pred             CCCCCCceEEcCCC--EEEEEEEeeeccc---ceEEEEecCHHHHHHHhhc
Confidence            89999999985434  4999999875322   235788884 488888765

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4.3e-07  Score=76.45  Aligned_cols=73  Identities=27%  Similarity=0.430  Sum_probs=52.6

Q ss_pred             CcCceEEEEeeeChhhhHhhhhcCCCccccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec-CC----
Q psy13815          3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI-GS----   77 (388)
Q Consensus         3 s~~L~~~~~~v~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~-~~----   77 (388)
                      ...|++..+.+.+...|.             ....|.. .....+.|.||+||||++..    +++||+|++. +|    
T Consensus       140 ~~~l~~~~~~~~~~~~~~-------------~~~~~~~-~~~~~~~c~gd~G~pl~~~~----~l~Gi~s~~~~gc~~~~  201 (221)
T d1fuja_         140 AQVLQELNVTVVTFFCRP-------------HNICTFV-PRRKAGICFGDSGGPLICDG----IIQGIDSFVIWGCATRL  201 (221)
T ss_dssp             CSBCEEEEEEEECTTCCT-------------TEEEEEC-SSSSCBCCTTCTTCEEEETT----EEEEEEEECSSSTTCSS
T ss_pred             Cccceeeeeeeeeecccc-------------ccceecc-ccCCCceeCCccCCCEEEeC----EEEEEEEEEECCCCCCC
Confidence            356788888777654331             2233433 34568999999999999864    9999999975 56    


Q ss_pred             -Cc--eeeEEEEeeccccc
Q psy13815         78 -PT--SVVQLLTRWTLDLE   93 (388)
Q Consensus        78 -~~--~~~~~~~~wi~~~~   93 (388)
                       |.  ++++.|.+||++++
T Consensus       202 ~p~vyt~v~~~~~WI~~~i  220 (221)
T d1fuja_         202 FPDFFTRVALYVDWIRSTL  220 (221)
T ss_dssp             SCEEEEEGGGGHHHHHHHH
T ss_pred             CCeEEEEHHHhHHHHHHHh
Confidence             22  78889999998764

>d2bhga1 b.47.1.4 (A:7-205) 3C cysteine protease (picornain 3C) {Foot-and-mouth disease virus FMDV [TaxId: 12110]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Viral cysteine protease of trypsin fold
domain: 3C cysteine protease (picornain 3C)
species: Foot-and-mouth disease virus FMDV [TaxId: 12110]

Probab=98.12  E-value=9.7e-06  Score=66.97  Aligned_cols=101  Identities=13%  Similarity=0.096  Sum_probs=53.2

Q ss_pred             EEccCC--ceeEEEEEeeCCEEEecCcCCCCCCCCCccceEEEEeccccCCCCceeeeceEEEEECCCCCCCCCCCcEEE
Q psy13815        133 SLKRHG--GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIAL  210 (388)
Q Consensus       133 ~i~~~~--~~~C~GtLI~~~~VLTAAhCv~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAL  210 (388)
                      .+...+  ...|.|..|..+++||++|.+...     ..  .+..+.................+..     .....||||
T Consensus        14 ~~~~~g~~~~~g~gl~v~g~~~l~~~H~~~~~-----~~--~i~~~~~~~~~~~~~~~~~~~~v~~-----~d~~~Dlal   81 (199)
T d2bhga1          14 ELNLDGKTVAICCATGVFGTAYLVPRHLFAEK-----YD--KIMLDGRAMTDSDYRVFEFEIKVKG-----QDMLSDAAL   81 (199)
T ss_dssp             EEEETTEEEEEEEEEEEEBTEEEEEHHHHTSC-----CS--EEEETTEEECGGGEEEECCEECCSS-----SCEECSEEE
T ss_pred             EEEECCeEEEEeEEEEEECCEEEECCcEeecC-----CC--EEEEeeeEEEEEeccceEEEEEEEe-----cCCCccEEE
Confidence            344444  346999999999999999998651     12  1222221111111111111111111     123469999


Q ss_pred             EEeCCCCCCCCCeeeeeCCCCCCCCCCCeEEEEEccc
Q psy13815        211 LELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGW  247 (388)
Q Consensus       211 l~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~GwG~  247 (388)
                      |+|.+...+.+....  ++.......++.+.++|+..
T Consensus        82 l~l~~~~~~~~~~~~--~~~~~~~~~g~~v~~ig~p~  116 (199)
T d2bhga1          82 MVLHRGNKVRDITKH--FRDTARMKKGTPVVGVVNNA  116 (199)
T ss_dssp             EEESSSCCBCCCGGG--BCSSCEECTTCEEEEEEEET
T ss_pred             EEcCCCCcCCccccc--ccccccccccceEEEEEcCC
Confidence            999876544333222  22222225677788888753

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=97.65  E-value=1.3e-05  Score=69.30  Aligned_cols=42  Identities=17%  Similarity=0.243  Sum_probs=32.6

Q ss_pred             ccCCCeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeec
Q psy13815         31 NVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGI   75 (388)
Q Consensus        31 ~~~~~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~   75 (388)
                      .+...++|++...+..+.|+|||||||++...   .++|++|++.
T Consensus       172 ~~~~~~~c~~~~~~~~~~c~GDSGGPL~~~~g---~~vGvvsgg~  213 (263)
T d1arba_         172 GAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEK---RVLGQLHGGP  213 (263)
T ss_dssp             SSCSSEEEEECCTTSCCCCTTCTTCEEECTTS---CEEEEEEECS
T ss_pred             CCCccEEEEEecCCCccccCCCCcceEEecCC---CEEEEEEEEE
Confidence            46678999987777788999999999997432   5677777663

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=97.15  E-value=0.00014  Score=58.60  Aligned_cols=49  Identities=14%  Similarity=0.083  Sum_probs=34.7

Q ss_pred             CeeEecccCCCcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc-eeeEEEEe
Q psy13815         35 SQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT-SVVQLLTR   87 (388)
Q Consensus        35 ~~~Cag~~~~~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~-~~~~~~~~   87 (388)
                      ...|..........|.|||||||+...    .++||+|++.+|.. ....+|.+
T Consensus       125 ~~~~~~~~~~~~~~~~GDSGgPl~~~~----~~vGi~s~g~~~~~~~~~~~~~p  174 (187)
T d1hpga_         125 DGPVYNMVRTTACSAGGDSGGAHFAGS----VALGIHSGSSGCSGTAGSAIHQP  174 (187)
T ss_dssp             TEEEEEEEEECCCCCTTCTTCEEEETT----EEEEEEEEESCCBTTBCCCEEEE
T ss_pred             CccEeccEEcCcccccCCCCCeEEECC----EEEEEEEEEecCCCCCCCEEEEE
Confidence            334444334456889999999999864    89999999988744 34445554

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=96.49  E-value=0.00012  Score=60.63  Aligned_cols=43  Identities=16%  Similarity=0.316  Sum_probs=32.0

Q ss_pred             CcCCCCCCCCCceEEeeCCcEEEEeeEEeecCCCc--------eeeEEEEeecc
Q psy13815         45 GKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPT--------SVVQLLTRWTL   90 (388)
Q Consensus        45 ~~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~--------~~~~~~~~wi~   90 (388)
                      ..+.|.|||||||+.   ..++|+||.|++.++..        +.+..|.+||+
T Consensus       163 ~~~~~~G~SGgPl~~---~~~~lvGi~s~g~~~~~~~~~~~i~~~v~~~i~wi~  213 (215)
T d1p3ca_         163 TIDTFSGNSGSAMLD---QNQQIVGVHNAGYSNGTINGGPKATAAFVEFINYAK  213 (215)
T ss_dssp             CCCCCTTCTTCEEEC---TTSCEEEECCEEEGGGTEEEEEBCCHHHHHHHHHHH
T ss_pred             ecccCCCCccCeEEC---CCCEEEEEEEeccCCCCCCCCeEEEeEHHHHHHHHH
Confidence            357899999999993   45689999999887632        23445667775

>d1cqqa_ b.47.1.4 (A:) 3C cysteine protease (picornain 3C) {Human rhinovirus 2 [TaxId: 12130]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Viral cysteine protease of trypsin fold
domain: 3C cysteine protease (picornain 3C)
species: Human rhinovirus 2 [TaxId: 12130]

Probab=96.14  E-value=0.071  Score=41.99  Aligned_cols=23  Identities=39%  Similarity=0.654  Sum_probs=19.3

Q ss_pred             CCcCCCceEEecCCccEEEEEEEecCC
Q psy13815        335 QADSGGPLMLLGAESTQVIGLVSTGIG  361 (388)
Q Consensus       335 ~gdsGgPL~~~~~~~~~l~Gi~s~g~~  361 (388)
                      .|+.|+||+...    .++||.+.|.+
T Consensus       144 ~g~cg~~~~~~~----~i~G~h~~g~~  166 (180)
T d1cqqa_         144 SGYCGGVLYKIG----QVLGIHVGGNG  166 (180)
T ss_dssp             TTCTTCEEEETT----EEEEEEEEECS
T ss_pred             CcccCCeEEECC----CEEEEEeccCC
Confidence            789999999754    49999998854

>d2sgaa_ b.47.1.1 (A:) Protease A {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease A
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=90.86  E-value=0.11  Score=40.77  Aligned_cols=37  Identities=32%  Similarity=0.366  Sum_probs=26.5

Q ss_pred             CCCCCCCCceEEeeCCcEEEEeeEEeecCC-CceeeEEEEee
Q psy13815         48 ACWADSGGPLMLLGAESTQVIGLVSTGIGS-PTSVVQLLTRW   88 (388)
Q Consensus        48 ~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~-~~~~~~~~~~w   88 (388)
                      ...|||||||+..+    .++||++.+.++ ....+++|.++
T Consensus       132 ~~~GdSGGPv~~~~----~~vGi~sgg~~~~~~~~~~~~~pv  169 (181)
T d2sgaa_         132 AQPGDSGGSLFAGS----TALGLTSGGSGNCRTGGTTFYQPV  169 (181)
T ss_dssp             CCTTCTTCEEEETT----EEEEEEEEEEEETTTEEEEEEEEH
T ss_pred             ccCCCcCCeeEECC----EEEEEEEEecCCCCCCceEEEEEH
Confidence            45899999999754    789999988754 23345565553

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

Probab=86.23  E-value=0.19  Score=40.30  Aligned_cols=29  Identities=28%  Similarity=0.457  Sum_probs=22.8

Q ss_pred             cCCCCCCCCCceEEeeCCcEEEEeeEEeecCC
Q psy13815         46 KDACWADSGGPLMLLGAESTQVIGLVSTGIGS   77 (388)
Q Consensus        46 ~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~   77 (388)
                      .+.|.|+|||||+-   ..+.++||.+++..+
T Consensus       162 ~~~~~G~SGgPv~~---~~g~vVGI~s~g~~~  190 (216)
T d2o8la1         162 LSTTGGNSGSPVFN---EKNEVIGIHWGGVPN  190 (216)
T ss_dssp             CCCCTTCTTCEEEC---TTSCEEEEEEEEETT
T ss_pred             cCcCCCCCCCcEEC---CCCEEEEEEeeecCC
Confidence            46799999999983   234799999987654

>d2h6ma1 b.47.1.4 (A:1-212) 3C cysteine protease (picornain 3C) {Human hepatitis A virus [TaxId: 208726]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Viral cysteine protease of trypsin fold
domain: 3C cysteine protease (picornain 3C)
species: Human hepatitis A virus [TaxId: 208726]

Probab=83.16  E-value=1.6  Score=34.77  Aligned_cols=27  Identities=19%  Similarity=0.319  Sum_probs=20.8

Q ss_pred             CCcCCCceEEecC-CccEEEEEEEecCC
Q psy13815        335 QADSGGPLMLLGA-ESTQVIGLVSTGIG  361 (388)
Q Consensus       335 ~gdsGgPL~~~~~-~~~~l~Gi~s~g~~  361 (388)
                      .|+-|+||+..+. ..-.++||.+.|.+
T Consensus       169 ~G~CGsplv~~~~~~~~kIiGiHvaG~g  196 (212)
T d2h6ma1         169 PGMCGGALVSSNQSIQNAILGIHVAGGN  196 (212)
T ss_dssp             TTCTTCEEEESCGGGTTCEEEEEEEEET
T ss_pred             CcCcCCeEEEcCCCCCceEEEEEcCCCC
Confidence            6888999998642 33469999999853

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

Probab=82.18  E-value=0.56  Score=38.23  Aligned_cols=29  Identities=14%  Similarity=0.250  Sum_probs=22.6

Q ss_pred             cCCCCCCCCCceEEeeCCcEEEEeeEEeecCC
Q psy13815         46 KDACWADSGGPLMLLGAESTQVIGLVSTGIGS   77 (388)
Q Consensus        46 ~~~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~   77 (388)
                      .+++.|+|||||+.   ..+.++||.+.+..+
T Consensus       188 ~~~~~G~SGgPl~~---~~g~vVGI~~~~~~~  216 (242)
T d1agja_         188 GFTVPGNSGSGIFN---SNGELVGIHSSKVSH  216 (242)
T ss_dssp             CCCCGGGTTCEEEC---TTSEEEEEEEEEEEC
T ss_pred             cccCCccCCCcEEC---CCCeEEEEEeEeecC
Confidence            35688999999983   234899999987655

>d2qaaa1 b.47.1.1 (A:16-242) Protease B {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease B
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=82.12  E-value=0.6  Score=36.36  Aligned_cols=36  Identities=36%  Similarity=0.436  Sum_probs=24.9

Q ss_pred             CCCCCCCCceEEeeCCcEEEEeeEEeecCCCc-eeeEEEEe
Q psy13815         48 ACWADSGGPLMLLGAESTQVIGLVSTGIGSPT-SVVQLLTR   87 (388)
Q Consensus        48 ~C~gdsGgpl~~~~~~~~~~~Gi~s~~~~~~~-~~~~~~~~   87 (388)
                      ...|||||||+..+    .++||++.+..+.. ....++.+
T Consensus       136 ~~~GdSGGPv~~~~----~~vGi~~~g~~~~~~~~~~~~~P  172 (185)
T d2qaaa1         136 AEPGDSGGPLYSGT----RAIGLTSGGSGNCSSGGTTFFQP  172 (185)
T ss_dssp             CCTTCTTCEEEETT----EEEEEEEEEEEETTTEEEEEEEE
T ss_pred             ecCCcccceeEECC----EEEEEEEEeecCCCCCceEEEEE
Confidence            34799999999754    79999998765422 33444444