Psyllid ID: psy13944
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1217 | 2.2.26 [Sep-21-2011] | |||||||
| Q5R834 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.227 | 0.537 | 0.368 | 2e-47 | |
| Q8WVX9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.227 | 0.537 | 0.365 | 4e-47 | |
| Q922J9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.227 | 0.537 | 0.358 | 2e-46 | |
| Q66H50 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.189 | 0.448 | 0.388 | 5e-46 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.183 | 0.433 | 0.414 | 6e-46 | |
| Q7ZXF5 | 515 | Fatty acyl-CoA reductase | N/A | N/A | 0.183 | 0.433 | 0.393 | 2e-44 | |
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | no | N/A | 0.189 | 0.369 | 0.389 | 2e-43 | |
| Q0P5J1 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.185 | 0.438 | 0.362 | 3e-41 | |
| Q96K12 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.185 | 0.438 | 0.357 | 8e-39 | |
| Q7TNT2 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.185 | 0.438 | 0.357 | 9e-39 |
| >sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 176/293 (60%), Gaps = 16/293 (5%)
Query: 26 KDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85
++ + FDRLR EN +F E+I+ + ++L L L E++K+V+ E NI+FH AATV+
Sbjct: 57 EEVLSGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVR 116
Query: 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145
F+E+ + A ++N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++
Sbjct: 117 FNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVD 173
Query: 146 MEQIINSCSHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVM 202
+++I+S + ++NDI LI PNTY +K E +V+++ KL + IVRPSIV
Sbjct: 174 PKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVG 233
Query: 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW--- 259
+EP P W+ NG + +++A G GI+RT+ + + + D+VP D+VVN+ LAAAW
Sbjct: 234 ASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSG 293
Query: 260 -DVARRVKKLDTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ R + + T S VE +I N E++ ++ +VN NH
Sbjct: 294 VNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Pongo abelii (taxid: 9601) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 176/293 (60%), Gaps = 16/293 (5%)
Query: 26 KDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85
++ + FDRLR EN +F E+I+ + ++L L L E++K+V+ + NI+FH AATV+
Sbjct: 57 EEVLSGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVR 116
Query: 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145
F+E+ + A ++N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++
Sbjct: 117 FNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVD 173
Query: 146 MEQIINSCSHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVM 202
+++I+S + ++NDI LI PNTY +K E +V+++ KL + IVRPSIV
Sbjct: 174 PKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVG 233
Query: 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW--- 259
+EP P W+ NG + +++A G GI+RT+ + + + D+VP D+VVN+ LAAAW
Sbjct: 234 ASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSG 293
Query: 260 -DVARRVKKLDTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ R + + T S VE +I N E++ ++ +VN NH
Sbjct: 294 VNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 175/293 (59%), Gaps = 16/293 (5%)
Query: 26 KDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85
++ + FDRLR EN +F E+I+ + ++L L L E++K+++ + N++FH AATV+
Sbjct: 57 EEILSSKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVR 116
Query: 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145
F+E+ + A ++N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++
Sbjct: 117 FNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVD 173
Query: 146 MEQIINSCSHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVM 202
+++I+S + ++NDI LI PNTY +K E +V+++ KL + IVRPSIV
Sbjct: 174 PKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVG 233
Query: 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW--- 259
+EP P W+ NG + +++A G GI+RT+ + + + D+VP D+VVN LAAAW
Sbjct: 234 ASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWYSG 293
Query: 260 -DVARRVKKLDTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ R + + T S VE +I N E++ ++ +VN NH
Sbjct: 294 VNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 154/237 (64%), Gaps = 6/237 (2%)
Query: 26 KDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85
++ + FDRLR EN +F ++I+ + ++L L L E++K+++ + N++FH AATV+
Sbjct: 57 EEILSGKLFDRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVR 116
Query: 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145
F+E+ + A ++N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++
Sbjct: 117 FNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVD 173
Query: 146 MEQIINSCSHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVM 202
+++I+S + ++NDI LI PNTY +K E +V+++ KL + IVRPSIV
Sbjct: 174 PKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVG 233
Query: 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259
+EP P W+ NG + +++A G GI+RT+ + + + D+VP D+VVN LAAAW
Sbjct: 234 ASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAW 290
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 150/229 (65%), Gaps = 6/229 (2%)
Query: 34 FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTA 93
FDRLR+E +F E+I+V+T++L L L K+ L E +NI+FH AATV+F+E + A
Sbjct: 65 FDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDA 124
Query: 94 FEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153
++N T++LL +A++M NL+ F++VSTAY+ CN K IEE Y P ++ +++++S
Sbjct: 125 VQLNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPP---PVDPKKLMDSL 181
Query: 154 SHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCP 210
+ +++NDI LI PNTYT +K E +V+++ +L I+RPSIV +EP P
Sbjct: 182 EWMDDSLVNDITPKLIGDRPNTYTYTKALAEYVVQQEGARLNTAIIRPSIVGASWKEPFP 241
Query: 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259
W+ NG + +++A G GI+RT+ + + D+VP D+VVN+ LAAAW
Sbjct: 242 GWIDNFNGPSGLFIAAGKGILRTMRASNGAVADLVPVDVVVNMTLAAAW 290
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 150/229 (65%), Gaps = 6/229 (2%)
Query: 34 FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTA 93
FD+LR E + ++++ ++++L L + ++++ L + ++IVFH AATV+F+E + A
Sbjct: 65 FDKLRDEQPDCAQKVIAISSELTQPELDMSKEDQDTLIDCIDIVFHCAATVRFNESLRDA 124
Query: 94 FEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153
++N T +LL +A++MK L+ FI+VSTAY+NCN K+IEE Y P ++ +++I S
Sbjct: 125 MQLNVIATRQLLYLAQKMKKLEVFIHVSTAYANCNRKQIEEVVYPP---PVDPKKLIESL 181
Query: 154 SHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCP 210
+ +++NDI LI PNTYT +K E +V+++ KL + IVRPSIV +EP P
Sbjct: 182 EWMDDSLVNDITPKLIGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFP 241
Query: 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259
W+ NG + +++A G GI+RT+ + + + D++P D+VVN LAAAW
Sbjct: 242 GWIDNFNGPSGLFIAAGKGILRTMRASNNAVADLIPVDVVVNTTLAAAW 290
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 138/231 (59%)
Query: 34 FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTA 93
F+ LR+E +++ ++ D+ S+ LG+ EK++ +L +V++VFH AATVKFDE + +
Sbjct: 180 FESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLS 239
Query: 94 FEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153
IN GT++L+++ M +LD+ I+VSTAY NC+ + E Y P Y ++ +IN
Sbjct: 240 VTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWL 299
Query: 154 SHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWV 213
L L LI PNTYT +K E M+ ++ LP+ IVRPSIV + EP WV
Sbjct: 300 PEDILDQLTPRLIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWV 359
Query: 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARR 264
NG T + A+ G+ RT+ + + DMVP D+V+N+++AAAW A R
Sbjct: 360 DNFNGPTGLVSALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAWRTATR 410
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 142/232 (61%), Gaps = 6/232 (2%)
Query: 34 FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTA 93
F+++++ N E+I ++ADL + + +++ K L NI+FH AATV+FD+H + A
Sbjct: 65 FEKVKEVCPNVHEKIRAISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDHLRHA 124
Query: 94 FEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153
++N T++LL MA +M L++FI++STA+SNCN+K I+E Y +E ++II+S
Sbjct: 125 VQLNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLKHIDEVVYP---CPVEPKKIIDSM 181
Query: 154 SHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCP 210
+ ++++I LI PNTYT +K E +V+++ L + I+RPSI+ +EP P
Sbjct: 182 EWLDDAIIDEITPKLIGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGATWQEPFP 241
Query: 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262
WV +NG + + +A G G +R++ + D++P D VVN+ LA W A
Sbjct: 242 GWVDNLNGPSGLIIAAGKGFLRSIRATPMAVADLIPADTVVNLTLAVGWYTA 293
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 138/232 (59%), Gaps = 6/232 (2%)
Query: 34 FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTA 93
F+++++ N E+I + ADL + + +++ + L NI+FH AATV+FD+ + A
Sbjct: 65 FEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHA 124
Query: 94 FEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153
++N T +LL MA +M L++FI++STAYSNCN+K I+E Y +E ++II+S
Sbjct: 125 VQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYP---CPVEPKKIIDSL 181
Query: 154 SHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCP 210
+ ++++I LI+ PN YT +K E +V+++ L + I+RPSIV +EP P
Sbjct: 182 EWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFP 241
Query: 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262
WV +NG + +A G G +R + + D++P D VVN++LA W A
Sbjct: 242 GWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTA 293
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 138/232 (59%), Gaps = 6/232 (2%)
Query: 34 FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTA 93
F+++++ N E+I ++ADL + +++ + L NI+FH AATV+FD H + A
Sbjct: 65 FEKVKEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREA 124
Query: 94 FEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153
++N T++LL MA +M L++FI++STA+SNCN+ I+E Y +E +II+S
Sbjct: 125 VQLNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYP---CPVEPRKIIDSM 181
Query: 154 SHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCP 210
+ +++ +I LI PNTYT +K E +V+++ L + IVRPSIV +EP P
Sbjct: 182 EWLDDSIIEEITPKLIGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFP 241
Query: 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262
WV +NG + + +A G G +R++ + D++P D VVN+ +A W A
Sbjct: 242 GWVDNLNGPSGLIIATGKGFLRSIKATPMAVADVIPVDTVVNLTIAVGWYTA 293
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1217 | ||||||
| 348529154 | 515 | PREDICTED: fatty acyl-CoA reductase 1-li | 0.185 | 0.438 | 0.400 | 4e-47 | |
| 157114336 | 530 | hypothetical protein AaeL_AAEL006774 [Ae | 0.196 | 0.450 | 0.380 | 9e-47 | |
| 156542678 | 538 | PREDICTED: putative fatty acyl-CoA reduc | 0.205 | 0.464 | 0.375 | 1e-46 | |
| 91087925 | 491 | PREDICTED: similar to GA12977-PA [Tribol | 0.201 | 0.498 | 0.408 | 1e-46 | |
| 170067375 | 564 | conserved hypothetical protein [Culex qu | 0.193 | 0.416 | 0.371 | 3e-46 | |
| 383865013 | 540 | PREDICTED: putative fatty acyl-CoA reduc | 0.226 | 0.511 | 0.355 | 5e-46 | |
| 328722094 | 522 | PREDICTED: putative fatty acyl-CoA reduc | 0.213 | 0.498 | 0.357 | 6e-46 | |
| 158300988 | 528 | AGAP011736-PA [Anopheles gambiae str. PE | 0.193 | 0.445 | 0.359 | 6e-46 | |
| 197102022 | 515 | fatty acyl-CoA reductase 1 [Pongo abelii | 0.227 | 0.537 | 0.368 | 1e-45 | |
| 417402150 | 515 | Putative acyl-coa reductase [Desmodus ro | 0.227 | 0.537 | 0.372 | 1e-45 |
| >gi|348529154|ref|XP_003452079.1| PREDICTED: fatty acyl-CoA reductase 1-like [Oreochromis niloticus] | Back alignment and taxonomy information |
|---|
Score = 197 bits (500), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 154/232 (66%), Gaps = 6/232 (2%)
Query: 34 FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTA 93
FDR+R+EN +F ++I+ ++++L GL + ++ + L +NIVFH AAT++FDE + A
Sbjct: 65 FDRVREENPDFHQKIIPISSELTQPGLAISPEDVEKLTACINIVFHCAATIRFDEPLKHA 124
Query: 94 FEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153
++N T++LL +A++M +L++FI++STAY+NCN K I+E Y P +E +++I+S
Sbjct: 125 LQLNVIATQQLLSLAQQMHHLEAFIHISTAYANCNRKHIDEVIYPP---PVEPKKLIDSL 181
Query: 154 SHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCP 210
+ ++ DI LI PNTYT +K E +V+++ DKL +GI+RPSIV +EP P
Sbjct: 182 EWMDDGIVRDITPRLIGDRPNTYTYTKALAEYVVQQEQDKLNIGIIRPSIVGASWQEPFP 241
Query: 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262
W+ NG + +++A G GI+RT+ N + D++P D+V+N+ LAA W A
Sbjct: 242 GWIDNFNGPSGVFIAAGKGILRTMRANNDAVADLIPVDVVINLTLAAGWYTA 293
|
Source: Oreochromis niloticus Species: Oreochromis niloticus Genus: Oreochromis Family: Cichlidae Order: Perciformes Class: Actinopterygii Phylum: Chordata Superkingdom: Eukaryota |
| >gi|157114336|ref|XP_001658050.1| hypothetical protein AaeL_AAEL006774 [Aedes aegypti] gi|108877391|gb|EAT41616.1| AAEL006774-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 196 bits (497), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 144/242 (59%)
Query: 25 AKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84
++ F D FD+++ + +I + D LG+ +++VL E+VNIVFH+AATV
Sbjct: 90 VEEIFDDAMFDKMKVACPKYDHKIRAIAGDCMLPNLGISPSDREVLVENVNIVFHLAATV 149
Query: 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144
+FDE +TA +IN K +L + EMK+L S IYVSTAY+ C K ++E+FYEP
Sbjct: 150 RFDEKMKTAMQINVKACRDILDLCYEMKHLKSVIYVSTAYTQCPQKVVDERFYEPPIDSK 209
Query: 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPV 204
+M + + S T + + IL+ PNTYT +K E +VR+ +P+G+ RP IV+
Sbjct: 210 KMISLTDCVSDTMMENITPILLDKWPNTYTFTKAIAEDVVRQNSRGMPIGMFRPGIVIAT 269
Query: 205 VEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARR 264
+EP P W+ G T + G G++RT+ + + + +MVP DL VN +++AAWD+A R
Sbjct: 270 YQEPVPGWIDNFYGPTGVIAGAGTGVLRTLRADPTKVANMVPVDLCVNGIISAAWDIAER 329
Query: 265 VK 266
+
Sbjct: 330 FR 331
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156542678|ref|XP_001602857.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 147/253 (58%)
Query: 17 KHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76
K SI ++ F D + RL+++ F ++V + D GLGL ++ +L DV+I
Sbjct: 91 KEKSIESRMEEMFKDPIYQRLKEQMPKFHHKVVAVAGDCSIQGLGLSTSDRDLLMRDVSI 150
Query: 77 VFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKF 136
VFHVAATV+FDE + A IN + T ++ + ++M+ L SF++VSTAY+NC ++I EKF
Sbjct: 151 VFHVAATVRFDEKLKLASAINVQSTADIIDLCKDMQKLKSFVHVSTAYANCISREITEKF 210
Query: 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIV 196
Y+ + E+ ++N L + +I P PNTY +K E +VR + LP+GI
Sbjct: 211 YDYPIKNEELLSLVNCLPDETLNEIAPRVISPWPNTYAFTKALAEDLVRSRNKSLPMGIF 270
Query: 197 RPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLA 256
RP IV+ EP P W+ G T + V G++RT++ + N ++VP DL VN L+A
Sbjct: 271 RPGIVISTANEPIPGWIDNFYGPTGVVAGVATGVLRTLHCDPKNKANIVPVDLTVNALIA 330
Query: 257 AAWDVARRVKKLD 269
+AWDVA + + D
Sbjct: 331 SAWDVAMQTARRD 343
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91087925|ref|XP_971355.1| PREDICTED: similar to GA12977-PA [Tribolium castaneum] gi|270012024|gb|EFA08472.1| hypothetical protein TcasGA2_TC006122 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 143/245 (58%)
Query: 27 DFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86
D F F+RL+KEN F ++IV ++ D + LG+ + + VL + +IV H AA VKF
Sbjct: 59 DLFNFPCFERLKKENPEFRKKIVFVSGDCERPNLGISPETEDVLIAETSIVIHAAANVKF 118
Query: 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146
D+ +TA IN + T LK+A++M L +FIYVSTAYSNC IEEKFY PL T +
Sbjct: 119 DQPLRTAAYINVRSTWDCLKLAKKMPKLKAFIYVSTAYSNCPYIDIEEKFYTPLVTPRTL 178
Query: 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVE 206
QI++S L + L+ PN Y +K E +++ + LP+GIVRP+IV+ E
Sbjct: 179 LQIVDSLDDEILDNITPGLLGKWPNAYVFTKTIAEDLIKSEGKNLPIGIVRPAIVVTCAE 238
Query: 207 EPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVK 266
EP P W+ G+ M VA+ LGI+R+V+ +VP D V N +LA+ W+VA+
Sbjct: 239 EPVPGWIDNFYGVIGMTVAIALGIVRSVHAIKKAPCHLVPCDYVCNFILASTWNVAQETT 298
Query: 267 KLDTI 271
TI
Sbjct: 299 DQITI 303
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170067375|ref|XP_001868455.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167863531|gb|EDS26914.1| conserved hypothetical protein [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 145/242 (59%)
Query: 25 AKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84
++ F D F+++++ + +I + D LG+ +++ L E+VNIVFH+AATV
Sbjct: 124 VEEIFEDAMFNKMKQACPKYDHKIRAIAGDCTLPSLGIGSSDRETLVENVNIVFHLAATV 183
Query: 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144
+FDE +TA +IN K +L + EMK+L S IYVSTAY+ C K++EE+FYEP
Sbjct: 184 RFDEKMKTAMQINVKACRDILDLCYEMKHLKSVIYVSTAYTQCPQKEVEERFYEPPLDSK 243
Query: 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPV 204
+M + + S + + + IL+ PNTYT +K E +VR+ +P+G+ RP IV+
Sbjct: 244 KMIALTDCVSDSMMENITPILLDKWPNTYTFTKAIAEDVVRQNSRGMPIGMFRPGIVIAT 303
Query: 205 VEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARR 264
+EP P W+ G T + G G++RT+ + + + +MVP DL VN +++AAWD+A R
Sbjct: 304 YQEPVPGWIDNFYGPTGVIAGAGTGVLRTLRADPTKVANMVPVDLCVNGMISAAWDIAER 363
Query: 265 VK 266
+
Sbjct: 364 FQ 365
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383865013|ref|XP_003707971.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 164/284 (57%), Gaps = 8/284 (2%)
Query: 25 AKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84
++ F D FD+LR+++ F +I+ + D GLGL E ++ + + V+IVFHVAATV
Sbjct: 90 VEEIFDDPLFDKLREKHPKFRHQIIAVAGDCTEPGLGLSEVDRSTITQRVSIVFHVAATV 149
Query: 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144
+FDE + A IN + + ++ + +EM NL SF++VSTAY+NC IEEK Y+P +
Sbjct: 150 RFDEKMKLAVPINVRSPKDIIHLCKEMPNLKSFVHVSTAYANCPRDFIEEKVYDP---PM 206
Query: 145 EMEQIINSCSHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIV 201
E +++I + ++++I L+ PNTYT +K E ++ ++ LP+GI RP+IV
Sbjct: 207 EADKLITLVDCMDEKLVDEITPRLLGSWPNTYTFTKALAESVIAKEAGDLPVGIFRPAIV 266
Query: 202 MPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261
+ EP W+ M G T + G G++R+++ + S ++VPGDL +N L+A AWDV
Sbjct: 267 ISTYREPTRGWIDNMYGPTGVAAGAGTGVLRSIHCDGSIQANVVPGDLTINALIACAWDV 326
Query: 262 ARRVKKLDTITRSDQNVEA-KLIDPNNNVEEESIKKLDVNYEIN 304
A R K + T +N+ + +N V E +K L Y +
Sbjct: 327 ANR-KSMITTEEKTKNIPVYHYVSKDNPVTYEQLKSLSEKYGLQ 369
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328722094|ref|XP_001947250.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 157/263 (59%), Gaps = 3/263 (1%)
Query: 26 KDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85
K+ F D F+ ++KE NF E+I + D +G++EK +++++VNIV H AATV+
Sbjct: 70 KELFDDPVFELMKKEQPNFLEKITAVIGDCALPNMGIEEKYINIIKDEVNIVIHSAATVR 129
Query: 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK-IEEKFYEPLYTHI 144
FDEH + A IN + +LK+++ +KNL +F+++STAYSNC ++ ++E FY+P T
Sbjct: 130 FDEHLRIAVNINIIALQDILKISQNIKNLKAFVHISTAYSNCAGREVVDEIFYKPPITGD 189
Query: 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPV 204
++ Q++NS +T + L+ PNTY ++K E + LP+G++RPS+++
Sbjct: 190 KLLQVVNSLDDEYITRITPSLLGEWPNTYAMTKAIAEGEIMTYGKGLPIGVIRPSMIIAT 249
Query: 205 VEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARR 264
EP P W+ G T + A G+G+MR + +++ D+VPGD V N +LA AWD+ +
Sbjct: 250 DNEPVPGWINNFYGPTGVVAATGIGLMRCMNADSTKTADIVPGDYVSNAVLACAWDIHNK 309
Query: 265 VKKLDTI--TRSDQNVEAKLIDP 285
K+ + + D + LIDP
Sbjct: 310 WKEQNASNEMKVDNLEKETLIDP 332
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158300988|ref|XP_320774.4| AGAP011736-PA [Anopheles gambiae str. PEST] gi|157013424|gb|EAA00047.4| AGAP011736-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 144/242 (59%)
Query: 25 AKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84
++ F D FD++++ + +I + D GLG+ +++VL E+VNIVFH+AATV
Sbjct: 88 VEEIFDDAMFDKMKQACPKYDHKIRAVAGDCMQPGLGISSSDREVLTENVNIVFHLAATV 147
Query: 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144
+FDE +TA +IN K +L + +MK+L S IYVSTAY+ C ++E+FYEP
Sbjct: 148 RFDEKMKTAMQINVKACRDVLDLCHDMKHLKSVIYVSTAYTQCPQSVVDERFYEPPLESE 207
Query: 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPV 204
+M + + + + + +L+ PNTYT +K E +VR+ +P+G+ RP IV+
Sbjct: 208 KMIHLTDCVTDGMIEKITPVLLDKWPNTYTFTKAIAEDVVRKNSRGMPVGMFRPGIVIAT 267
Query: 205 VEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARR 264
+EP P W+ G T + G G++RT+ + + + +MVP DL VN ++++AWD+A R
Sbjct: 268 YQEPVPGWIDNFYGPTGVIAGAGTGVLRTLRADPTKVANMVPVDLCVNGIISSAWDIAER 327
Query: 265 VK 266
+
Sbjct: 328 FR 329
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|197102022|ref|NP_001126210.1| fatty acyl-CoA reductase 1 [Pongo abelii] gi|75041501|sp|Q5R834.1|FACR1_PONAB RecName: Full=Fatty acyl-CoA reductase 1; AltName: Full=Male sterility domain-containing protein 2 gi|55729163|emb|CAH91318.1| hypothetical protein [Pongo abelii] gi|55730711|emb|CAH92076.1| hypothetical protein [Pongo abelii] | Back alignment and taxonomy information |
|---|
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 176/293 (60%), Gaps = 16/293 (5%)
Query: 26 KDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85
++ + FDRLR EN +F E+I+ + ++L L L E++K+V+ E NI+FH AATV+
Sbjct: 57 EEVLSGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVR 116
Query: 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145
F+E+ + A ++N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++
Sbjct: 117 FNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVD 173
Query: 146 MEQIINSCSHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVM 202
+++I+S + ++NDI LI PNTY +K E +V+++ KL + IVRPSIV
Sbjct: 174 PKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVG 233
Query: 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW--- 259
+EP P W+ NG + +++A G GI+RT+ + + + D+VP D+VVN+ LAAAW
Sbjct: 234 ASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSG 293
Query: 260 -DVARRVKKLDTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ R + + T S VE +I N E++ ++ +VN NH
Sbjct: 294 VNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
Source: Pongo abelii Species: Pongo abelii Genus: Pongo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|417402150|gb|JAA47930.1| Putative acyl-coa reductase [Desmodus rotundus] | Back alignment and taxonomy information |
|---|
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 176/293 (60%), Gaps = 16/293 (5%)
Query: 26 KDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85
++ + FDRLR EN +F E+IV + ++L L L E++K+V+ E NI+FH AATV+
Sbjct: 57 EEVISGKLFDRLRDENPDFREKIVAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVR 116
Query: 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145
F+E+ + A ++N T++L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++
Sbjct: 117 FNENLRDAVQLNVIATQQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVD 173
Query: 146 MEQIINSCSHTELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVM 202
+++I+S + ++NDI LI PNTY +K E +V+++ KL + IVRPSIV
Sbjct: 174 PKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYIVQQEGAKLNVAIVRPSIVG 233
Query: 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW--- 259
+EP P W+ NG + +++A G GI+RT+ + + + D+VP D+VVN LAAAW
Sbjct: 234 ASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWYSG 293
Query: 260 -DVARRVKKLDTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ R + + T S VE +I N E++ ++ +VN NH
Sbjct: 294 VNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
Source: Desmodus rotundus Species: Desmodus rotundus Genus: Desmodus Family: Phyllostomidae Order: Chiroptera Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1217 | ||||||
| FB|FBgn0039620 | 517 | CG1443 [Drosophila melanogaste | 0.185 | 0.437 | 0.373 | 4.4e-53 | |
| ZFIN|ZDB-GENE-060503-367 | 515 | si:dkey-97m3.1 "si:dkey-97m3.1 | 0.184 | 0.434 | 0.382 | 7e-52 | |
| UNIPROTKB|G8ENM4 | 515 | FAR1 "Uncharacterized protein" | 0.219 | 0.518 | 0.374 | 8.6e-52 | |
| UNIPROTKB|E2R4R9 | 514 | FAR1 "Uncharacterized protein" | 0.219 | 0.519 | 0.363 | 4.8e-51 | |
| UNIPROTKB|Q8WVX9 | 515 | FAR1 "Fatty acyl-CoA reductase | 0.219 | 0.518 | 0.371 | 7.7e-51 | |
| UNIPROTKB|A5PJQ0 | 515 | FAR1 "Uncharacterized protein" | 0.219 | 0.518 | 0.367 | 7.9e-51 | |
| MGI|MGI:1914670 | 515 | Far1 "fatty acyl CoA reductase | 0.219 | 0.518 | 0.363 | 1e-50 | |
| UNIPROTKB|Q5ZM72 | 515 | FAR1 "Fatty acyl-CoA reductase | 0.219 | 0.518 | 0.378 | 7.3e-50 | |
| RGD|1306647 | 515 | Far1 "fatty acyl CoA reductase | 0.181 | 0.429 | 0.396 | 7.4e-50 | |
| UNIPROTKB|Q66H50 | 515 | Far1 "Fatty acyl-CoA reductase | 0.181 | 0.429 | 0.396 | 7.4e-50 |
| FB|FBgn0039620 CG1443 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 4.4e-53, Sum P(2) = 4.4e-53
Identities = 86/230 (37%), Positives = 139/230 (60%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
++++ N + +I +++ D GLG+ E++ + E+VNIV H AATV+FDE + A
Sbjct: 94 KMKQVNPKYRCQITIISGDCSLPGLGISADERETIMENVNIVLHSAATVRFDEKLKMAIA 153
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC-- 153
IN GT++++K+A+E+ NL + ++VSTA+++CN++ I+E+FY + E ++ C
Sbjct: 154 INVHGTKEIIKLAKEIVNLKALVHVSTAFAHCNMRHIQERFYSGTMSG-ENAFKLSECLD 212
Query: 154 SHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWV 213
HT L L +IK PNTYT +K E +V++ LP+ I RP IV+ EP W+
Sbjct: 213 EHT-LNTLTPTIIKGYPNTYTFTKVLAENVVQQSAQNLPVTIFRPGIVITTYREPVTGWI 271
Query: 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263
M G + V +G G++R + N +VP D+ VN LLA+AWD+AR
Sbjct: 272 DNMYGPCGVIVGIGSGVLRVFTGDMDNKAHIVPVDMCVNALLASAWDIAR 321
|
|
| ZFIN|ZDB-GENE-060503-367 si:dkey-97m3.1 "si:dkey-97m3.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 7.0e-52, Sum P(2) = 7.0e-52
Identities = 88/230 (38%), Positives = 149/230 (64%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
R+R++N F ++I+ ++++L GL + ++ + L V+IVFH AAT++FDE + A +
Sbjct: 67 RVREDNPEFHQKIIAISSELMQPGLAISAQDVETLTSRVHIVFHCAATIRFDEPLKHALQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T++LL +A++M+ L +FI++STAY+NCN + I+E Y P +E ++I+S
Sbjct: 127 LNVMATQQLLSLAQQMQQLQAFIHISTAYANCNRRHIDELIYPP---PVEPRKLIDSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ +++ DI LI PNTYT +K E +V+++ KL +GIVRPSIV +EP P W
Sbjct: 184 MDESIIRDITPRLIGDWPNTYTYTKALAECVVQQESAKLNVGIVRPSIVGASWQEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262
+ NG + +++A G GI+RT+ + + D++P D+V+N+ LAA W A
Sbjct: 244 IDNFNGPSGVFIAAGKGILRTMRASNDAVADLIPVDVVINLTLAAGWYTA 293
|
|
| UNIPROTKB|G8ENM4 FAR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 467 (169.5 bits), Expect = 8.6e-52, Sum P(2) = 8.6e-52
Identities = 106/283 (37%), Positives = 169/283 (59%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
RLR EN +F E+I+ + ++L L L E++KK + + NI+FH AATV+F+E+ + A +
Sbjct: 67 RLRDENPDFREKIIAINSELTQPKLALSEEDKKTIIDSTNIIFHCAATVRFNENLRDAVQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++ +++INS
Sbjct: 127 LNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVDPQKLINSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ ++NDI LI PNTY +K E +V+++ KL + IVRPSIV +EP P W
Sbjct: 184 MDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW----DVARRVKKL 268
+ NG + +++A G GI+RT+ + + + D+VP D+VVN LAAAW + R +
Sbjct: 244 IDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIMVY 303
Query: 269 DTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ T S VE +I N E++ ++ +VN NH
Sbjct: 304 NCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
|
| UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 462 (167.7 bits), Expect = 4.8e-51, Sum P(2) = 4.8e-51
Identities = 103/283 (36%), Positives = 171/283 (60%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
RLR EN +F E+++ + ++L L L E++K+++ + +NI+FH AATV+F+E+ + A +
Sbjct: 67 RLRDENPDFREKVIAINSELTQPKLALSEEDKEIIIDSINIIFHCAATVRFNENLRDAVQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++ +++I+S
Sbjct: 127 LNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVDPKKLIDSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ ++NDI LI PNTY +K E +V+++ KL + IVRPSIV +EP P W
Sbjct: 184 MDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW----DVARRVKKL 268
+ NG + +++A G GI+RT+ + + + D+VP D+VVN LAAAW + R +
Sbjct: 244 IDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIMVY 303
Query: 269 DTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ T S VE +I N E++ ++ +VN NH
Sbjct: 304 NCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
|
| UNIPROTKB|Q8WVX9 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 465 (168.7 bits), Expect = 7.7e-51, Sum P(2) = 7.7e-51
Identities = 105/283 (37%), Positives = 171/283 (60%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
RLR EN +F E+I+ + ++L L L E++K+V+ + NI+FH AATV+F+E+ + A +
Sbjct: 67 RLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++ +++I+S
Sbjct: 127 LNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVDPKKLIDSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ ++NDI LI PNTY +K E +V+++ KL + IVRPSIV +EP P W
Sbjct: 184 MDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW----DVARRVKKL 268
+ NG + +++A G GI+RT+ + + + D+VP D+VVN+ LAAAW + R +
Sbjct: 244 IDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNIMVY 303
Query: 269 DTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ T S VE +I N E++ ++ +VN NH
Sbjct: 304 NCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
|
| UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 7.9e-51, Sum P(2) = 7.9e-51
Identities = 104/283 (36%), Positives = 171/283 (60%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
RLR EN +F E+I+ + ++L L L E++K+++ + NI+FH AATV+F+E+ + A +
Sbjct: 67 RLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNIIFHCAATVRFNENLRDAVQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++ +++I+S
Sbjct: 127 LNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVDPKKLIDSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ ++NDI LI PNTY +K E +V+++ KL + IVRPSIV +EP P W
Sbjct: 184 MDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVVIVRPSIVGASWKEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW----DVARRVKKL 268
+ NG + +++A G GI+RT+ + + + D+VP D+VVN+ LAAAW + R +
Sbjct: 244 IDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNIMVY 303
Query: 269 DTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ T S VE +I N E++ ++ +VN NH
Sbjct: 304 NCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
|
| MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 1.0e-50, Sum P(2) = 1.0e-50
Identities = 103/283 (36%), Positives = 170/283 (60%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
RLR EN +F E+I+ + ++L L L E++K+++ + N++FH AATV+F+E+ + A +
Sbjct: 67 RLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++ +++I+S
Sbjct: 127 LNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVDPKKLIDSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ ++NDI LI PNTY +K E +V+++ KL + IVRPSIV +EP P W
Sbjct: 184 MDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW----DVARRVKKL 268
+ NG + +++A G GI+RT+ + + + D+VP D+VVN LAAAW + R +
Sbjct: 244 IDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIMVY 303
Query: 269 DTITRSDQ-----NVEAKLIDP-NNNVEEESIKKLDVNYEINH 305
+ T S VE +I N E++ ++ +VN NH
Sbjct: 304 NCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
|
| UNIPROTKB|Q5ZM72 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 452 (164.2 bits), Expect = 7.3e-50, Sum P(2) = 7.3e-50
Identities = 107/283 (37%), Positives = 169/283 (59%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
RLR+E +F E+I+V+T++L L L K+ L E +NI+FH AATV+F+E + A +
Sbjct: 67 RLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDAVQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T++LL +A++M NL+ F++VSTAY+ CN K IEE Y P ++ +++++S
Sbjct: 127 LNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPP---PVDPKKLMDSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ +++NDI LI PNTYT +K E +V+++ +L I+RPSIV +EP P W
Sbjct: 184 MDDSLVNDITPKLIGDRPNTYTYTKALAEYVVQQEGARLNTAIIRPSIVGASWKEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW--DVAR-RVKKLD 269
+ NG + +++A G GI+RT+ + + D+VP D+VVN+ LAAAW V R R +
Sbjct: 244 IDNFNGPSGLFIAAGKGILRTMRASNGAVADLVPVDVVVNMTLAAAWYSGVNRPRNIMVY 303
Query: 270 TITRSDQN------VEAKLIDP-NNNVEEESIKKLDVNYEINH 305
T N VE +I N E++ ++ +VN NH
Sbjct: 304 NCTTGGTNPFHWSEVEYHVISTFKRNPLEQAFRRPNVNLTSNH 346
|
|
| RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 450 (163.5 bits), Expect = 7.4e-50, Sum P(2) = 7.4e-50
Identities = 90/227 (39%), Positives = 149/227 (65%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
RLR EN +F ++I+ + ++L L L E++K+++ + N++FH AATV+F+E+ + A +
Sbjct: 67 RLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++ +++I+S
Sbjct: 127 LNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVDPKKLIDSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ ++NDI LI PNTY +K E +V+++ KL + IVRPSIV +EP P W
Sbjct: 184 MDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259
+ NG + +++A G GI+RT+ + + + D+VP D+VVN LAAAW
Sbjct: 244 IDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAW 290
|
|
| UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 450 (163.5 bits), Expect = 7.4e-50, Sum P(2) = 7.4e-50
Identities = 90/227 (39%), Positives = 149/227 (65%)
Query: 36 RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFE 95
RLR EN +F ++I+ + ++L L L E++K+++ + N++FH AATV+F+E+ + A +
Sbjct: 67 RLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQ 126
Query: 96 INCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155
+N T +L+ +A++MKNL+ F++VSTAY+ CN K I+E Y P ++ +++I+S
Sbjct: 127 LNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPP---PVDPKKLIDSLEW 183
Query: 156 TELTVLNDI---LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW 212
+ ++NDI LI PNTY +K E +V+++ KL + IVRPSIV +EP P W
Sbjct: 184 MDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGW 243
Query: 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259
+ NG + +++A G GI+RT+ + + + D+VP D+VVN LAAAW
Sbjct: 244 IDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAW 290
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1217 | |||
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 3e-70 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 1e-47 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-39 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 4e-27 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 2e-20 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 2e-17 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 2e-17 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 1e-15 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 3e-15 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-13 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 3e-13 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 3e-13 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 2e-11 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 8e-11 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-09 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 2e-09 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 3e-09 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 8e-09 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 2e-08 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 3e-08 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 5e-07 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 5e-07 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 3e-06 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 2e-04 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 5e-04 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 237 bits (608), Expect = 3e-70
Identities = 98/258 (37%), Positives = 143/258 (55%), Gaps = 9/258 (3%)
Query: 5 RGKLGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDE 64
RGK G + + + ++ D FDR R N F +IV + DL LGL +
Sbjct: 35 RGKSGQSAEE--------RL-RELLKDKLFDRGRNLNPLFESKIVPIEGDLSEPNLGLSD 85
Query: 65 KEKKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 124
++ + L E+VNI+ H AATV FDE A IN GT +LL++A+ K L +F++VSTAY
Sbjct: 86 EDLQTLIEEVNIIIHCAATVTFDERLDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAY 145
Query: 125 SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMV 184
N + + IEEK Y P ++ I+ EL L+ PNTYT +K E++V
Sbjct: 146 VNGDRQLIEEKVYPPPADPEKLIDILELMDDLELERATPKLLGGHPNTYTFTKALAERLV 205
Query: 185 REKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244
++ LPL IVRPSIV ++EP P W+ NG +++A G GI+RT+ + + + D+
Sbjct: 206 LKERGNLPLVIVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADI 265
Query: 245 VPGDLVVNILLAAAWDVA 262
+P D+V N LLAAA
Sbjct: 266 IPVDVVANALLAAAAYSG 283
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 1e-47
Identities = 77/240 (32%), Positives = 115/240 (47%), Gaps = 35/240 (14%)
Query: 25 AKDFFADDAFDRLRKE--------NANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76
AKD + A +RLR+E ERI+ + DL LGL +++ + L E+V++
Sbjct: 31 AKD--GESALERLRQELLKYGLFDRLKALERIIPVAGDLSEPNLGLSDEDFQELAEEVDV 88
Query: 77 VFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNI-KKIEEK 135
+ H AATV F E + N GT ++L++A++MK L F +VSTAY N +EEK
Sbjct: 89 IIHNAATVNFVEPYSDLRATNVLGTREVLRLAKQMKKL-PFHHVSTAYVNGERGGLLEEK 147
Query: 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGI 195
+ E L+ +PN YT SK EQ+VRE LP+ I
Sbjct: 148 ------PYKLDEDEPA-------------LLGGLPNGYTQSKWLAEQLVREAAGGLPVVI 188
Query: 196 VRPSIVMPVVEEPCPMWVKGMN-GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNIL 254
RPSI+ E W+ G + G + GLG++ + + +D+VP D V N +
Sbjct: 189 YRPSIITG---ESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 1e-39
Identities = 62/154 (40%), Positives = 84/154 (54%)
Query: 527 RLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAAT 586
RLR+ D FD R N F +IV + DL LGL ++ + L E+VNI+ H AAT
Sbjct: 45 RLRELLKDKLFDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAAT 104
Query: 587 VKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 646
V FDE A IN GT +LL++A+ K L +F++VSTAY N + + IEEK Y P
Sbjct: 105 VTFDERLDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADP 164
Query: 647 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSK 680
++ I+ EL L+ PNTYT +K
Sbjct: 165 EKLIDILELMDDLELERATPKLLGGHPNTYTFTK 198
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 4e-27
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 527 RLRD-FFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAA 585
RLR FD L+ ERI+ + DL LGL ++ + L E+V+++ H AA
Sbjct: 40 RLRQELLKYGLFDRLK-----ALERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAA 94
Query: 586 TVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNI-KKIEEKFYEPLY 644
TV F E + N GT ++L++A++MK L F +VSTAY N +EEK
Sbjct: 95 TVNFVEPYSDLRATNVLGTREVLRLAKQMKKL-PFHHVSTAYVNGERGGLLEEK------ 147
Query: 645 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNA 682
+ E L+ +PN YT SK
Sbjct: 148 PYKLDEDEPA-------------LLGGLPNGYTQSKWL 172
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 2e-20
Identities = 64/244 (26%), Positives = 125/244 (51%), Gaps = 27/244 (11%)
Query: 41 NANFTERIVVLTADLQSDGLGL-DEKEKKVLREDVNIVFHVAATVKFDEHFQTAFEINCK 99
N+ +E++ + D+ D LG+ D ++ + ++++IV ++AAT FDE + A IN
Sbjct: 79 NSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTL 138
Query: 100 GTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFY---EPLYTHIE--------- 145
G +L A++ + ++VSTAY C K I EK + E L + +
Sbjct: 139 GALNVLNFAKKCVKVKMLLHVSTAYV-CGEKSGLILEKPFHMGETLNGNRKLDINEEKKL 197
Query: 146 MEQIIN-----SCSHTELT-VLNDILIKPM-----PNTYTLSKNACEQMVREKMDKLPLG 194
+++ + S E+T + D+ ++ PNTY +K E ++ + LPL
Sbjct: 198 VKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENLPLV 257
Query: 195 IVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNIL 254
I+RP+++ +EP P W++G+ + ++ V G G + + ++++D++P D+VVN +
Sbjct: 258 IIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAM 317
Query: 255 LAAA 258
+ A
Sbjct: 318 IVAM 321
|
Length = 491 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 2e-17
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 426 LYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTL 485
+LLP + + L +L G+K +L+K+YRK+ L + F+ NEW F NDN L+ L
Sbjct: 1 FLHLLPAYLLDLLL-RLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERL 59
Query: 486 NSKDRKMFGFSMKKVSWLFFHLNLHRSLSKY 516
+ +DR++F F ++ + W + N L KY
Sbjct: 60 SEEDRELFNFDIRSIDWDDYFENYIPGLRKY 90
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 2e-17
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1072 LYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTL 1131
+LLP + + L +L G+K +L+K+YRK+ L + F+ NEW F NDN L+ L
Sbjct: 1 FLHLLPAYLLDLLL-RLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERL 59
Query: 1132 NSKDRKMFGFSMKKVSWLFFHLNLHRSLSKY 1162
+ +DR++F F ++ + W + N L KY
Sbjct: 60 SEEDRELFNFDIRSIDWDDYFENYIPGLRKY 90
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 1e-15
Identities = 59/224 (26%), Positives = 87/224 (38%), Gaps = 41/224 (18%)
Query: 46 ERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLL 105
+R+ VL DL LGL + L V+ V H AA+ F + A+ N GTE +L
Sbjct: 49 DRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVL 108
Query: 106 KMAEEMKNLDS--FIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLND 163
++A LD F YVSTAY N E E+ N
Sbjct: 109 ELA---ARLDIQRFHYVSTAYVAGN--------REGNIRETELNPGQN------------ 145
Query: 164 ILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL---- 219
N Y SK EQ+VR ++PL + RPSIV+ + + +
Sbjct: 146 -----FKNPYEQSKAEAEQLVRAAATQIPLTVYRPSIVVGDSK------TGRIEKIDGLY 194
Query: 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVN-ILLAAAWDVA 262
+ + LG + N +++VP D V + I+ + A
Sbjct: 195 ELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLSKKPEA 238
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 3e-15
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 34/246 (13%)
Query: 47 RIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLK 106
++V + ++ LGL+ + ++V+++ + AA FDE + A +IN +G L+
Sbjct: 193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMS 252
Query: 107 MAEEMKNLDSFIYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLN--- 162
A++ K L F+ VSTAY N + +I EK + + I E I++ L+
Sbjct: 253 FAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFR-MGDCIARELGISNSLPHNRPALDIEA 311
Query: 163 DI---------------LIKPMP-------------NTYTLSKNACEQMVREKMDKLPLG 194
+I + M +TY +K E ++ +P+
Sbjct: 312 EIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMRGDIPVV 371
Query: 195 IVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNIL 254
I+RPS++ ++P P W++G + + + G G + + + ++D+VP D+VVN
Sbjct: 372 IIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNAT 431
Query: 255 LAA-AW 259
LAA A
Sbjct: 432 LAAMAK 437
|
Length = 605 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 1e-13
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 30 ADDAFDRLRK---------ENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHV 80
+ A +RL + RI V+ DL LGL + + + L E+V+++ H
Sbjct: 37 EEAALERLIDNLKEYGLNLWDELELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHN 96
Query: 81 AATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140
A V + ++ N GT++LLK+A K +VST F
Sbjct: 97 GANVNWVYPYEELKPANVLGTKELLKLAATGKLK-PLHFVSTLSV----------FSAEE 145
Query: 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDK-LPLGIVRPS 199
Y ++ E+ + L N + PN Y SK E+++RE ++ LP+ I+RP
Sbjct: 146 YNALDDEESDD-----MLESQNGL-----PNGYIQSKWVAEKLLREAANRGLPVAIIRPG 195
Query: 200 IVMP 203
+
Sbjct: 196 NIFG 199
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 3e-13
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 426 LYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTL 485
Y+ LP F L +L G+K +L+K+YRK+ + FS+NEW F N N +L +
Sbjct: 1 FYHTLPAY-FLDLLLRLYGQKPRLVKLYRKIHKGLEVLQPFSLNEWIFDNKNTRELREKM 59
Query: 486 NSKDRKMFGFSMKKVSW 502
+ +D+K+F F M+ + W
Sbjct: 60 SEEDKKLFNFDMESLDW 76
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 3e-13
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 1072 LYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTL 1131
Y+ LP F L +L G+K +L+K+YRK+ + FS+NEW F N N +L +
Sbjct: 1 FYHTLPAY-FLDLLLRLYGQKPRLVKLYRKIHKGLEVLQPFSLNEWIFDNKNTRELREKM 59
Query: 1132 NSKDRKMFGFSMKKVSW 1148
+ +D+K+F F M+ + W
Sbjct: 60 SEEDKKLFNFDMESLDW 76
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-11
Identities = 46/177 (25%), Positives = 69/177 (38%), Gaps = 32/177 (18%)
Query: 31 DDAFDRLRK-------ENANFT-ERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAA 82
+ A +RLR+ + + ERI V+ DL LGL + E + L E+V+ + H A
Sbjct: 38 EHAMERLREALRSYRLWHEDLARERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGA 97
Query: 83 TVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142
V + + N GT ++L++A YVST +
Sbjct: 98 LVNWVYPYSELRGANVLGTREVLRLA-ASGRAKPLHYVSTI-----------SVGAAIDL 145
Query: 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDK-LPLGIVRP 198
E + TV + Y SK E +VRE D+ LP+ IVRP
Sbjct: 146 STVTED--------DATVTPPPGL---AGGYAQSKWVAELLVREASDRGLPVTIVRP 191
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 8e-11
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 31 DDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHF 90
+ FD R + +R+ V+ DL LGL E+ + L E+V+++ H AA V +
Sbjct: 45 EKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPY 104
Query: 91 QTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150
N GT ++L++A K YVS+ + E Y ++ ++I
Sbjct: 105 SELRGANVLGTAEVLRLAATGK-PKPLHYVSSI-------SVGETEY-YSNFTVDFDEIS 155
Query: 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDK-LPLGIVRP 198
+ + + Y SK E++VRE D+ LP+ I RP
Sbjct: 156 PTRNVGQGL----------AGGYGRSKWVAEKLVREAGDRGLPVTIFRP 194
|
Length = 382 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 525 KSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVA 584
RL D + L E RI V+ DL LGL + + L E+V+++ H
Sbjct: 41 LERLIDNL-KEYGLNLWDEL--ELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNG 97
Query: 585 ATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627
A V + ++ N GT++LLK+A K +VST
Sbjct: 98 ANVNWVYPYEELKPANVLGTKELLKLAATGKLK-PLHFVSTLS 139
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 2e-09
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 852 EEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 908
+EP P W+ NG +++A G GI+RT+ + + + D++P D+V N LLAAA
Sbjct: 227 KEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANALLAAAAYSG 283
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 3e-09
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 525 KSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVA 584
+RL FDL R + +R+ V+ DL LGL E+ + L E+V+++ H A
Sbjct: 41 LARLEK-----TFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNA 95
Query: 585 ATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625
A V + N GT ++L++A K YVS+
Sbjct: 96 ALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSS 135
|
Length = 382 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 8e-09
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLL 608
+R+ VL DL LGL A L V+ V H AA+ F + A+ N GTE +L
Sbjct: 49 DRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVL 108
Query: 609 KMAEEMKNLDS--FIYVSTAY 627
++A LD F YVSTAY
Sbjct: 109 ELA---ARLDIQRFHYVSTAY 126
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 2e-08
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Query: 521 PDLTKSRLRDFFADDAFDLLRKENVNFT-ERIVVLTADLQSDGLGLDEKAKEVLREDVNI 579
+ RLR+ A R + + ERI V+ DL LGL + E L E+V+
Sbjct: 37 EEHAMERLRE-----ALRSYRLWHEDLARERIEVVAGDLSEPRLGLSDAEWERLAENVDT 91
Query: 580 VFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626
+ H A V + + N GT ++L++A YVST
Sbjct: 92 IVHNGALVNWVYPYSELRGANVLGTREVLRLA-ASGRAKPLHYVSTI 137
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 3e-08
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLK 609
++V + ++ LGL+ + + ++V+++ + AA FDE + A +IN +G L+
Sbjct: 193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMS 252
Query: 610 MAEEMKNLDSFIYVSTAYSN 629
A++ K L F+ VSTAY N
Sbjct: 253 FAKKCKKLKLFLQVSTAYVN 272
|
Length = 605 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 5e-07
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 527 RLRD-FFADDAFDLLRK---ENVN--FTERIVVLTADLQSDGLGL-DEKAKEVLREDVNI 579
RL D D F +LR+ EN+N +E++ + D+ D LG+ D +E + ++++I
Sbjct: 56 RLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDI 115
Query: 580 VFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627
V ++AAT FDE + A IN G +L A++ + ++VSTAY
Sbjct: 116 VVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163
|
Length = 491 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 5e-07
Identities = 47/241 (19%), Positives = 78/241 (32%), Gaps = 43/241 (17%)
Query: 33 AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF----DE 88
DRLR + + DL + ++ + + V H+AA
Sbjct: 29 GLDRLRDGLDPLLSGVEFVVLDLTDR-----DLVDELAKGVPDAVIHLAAQSSVPDSNAS 83
Query: 89 HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148
++N GT LL+ A + F++ S+ Y
Sbjct: 84 DPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSV----------VY----------- 121
Query: 149 IINSCSHTELTVLNDILIKPMP-NTYTLSKNACEQMVRE--KMDKLPLGIVRPSIVMPVV 205
+++ L P P N Y +SK A EQ++R ++ LP+ I+RP V
Sbjct: 122 -----GDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVY--G 174
Query: 206 EEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMV-PGDLVVNILLAAAWDVARR 264
P G+ + G I + + S D V D+ +LLA
Sbjct: 175 PGDKPDLSSGVVSAFIRQLLKGEPI-IVIGGDGSQTRDFVYVDDVADALLLALENPDGGV 233
Query: 265 V 265
Sbjct: 234 F 234
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 39/135 (28%)
Query: 75 NIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA--YSNCNI 129
++V H+AA V + FE N GT LL+ A + + F+Y S+A Y +
Sbjct: 32 DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKA-GVKRFVYASSASVYGSPEG 90
Query: 130 KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNT-YTLSKNACEQMVREKM 188
EE+ P P + Y +SK A E ++R
Sbjct: 91 LPEEEETP------------------------------PRPLSPYGVSKLAAEHLLRSYG 120
Query: 189 DK--LPLGIVRPSIV 201
+ LP+ I+R + V
Sbjct: 121 ESYGLPVVILRLANV 135
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-04
Identities = 42/195 (21%), Positives = 64/195 (32%), Gaps = 49/195 (25%)
Query: 72 EDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST--AYSNCN 128
+ + VFH+AA + + + N +GT +L A E + ++ S+ A
Sbjct: 61 KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALE-AGVRRVVHTSSIAALGGPP 119
Query: 129 IKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM 188
+I+E +P PN Y SK E V E
Sbjct: 120 DGRIDETTPWN--------------------------ERPFPNDYYRSKLLAELEVLEAA 153
Query: 189 DK-LPLGIVRPSIVM-PVVEEPCPMW---VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVD 243
+ L + IV PS V P E P + +NG Y G + VD
Sbjct: 154 AEGLDVVIVNPSAVFGPGDEGPTSTGLDVLDYLNGKLPAYPPGGT-----------SFVD 202
Query: 244 MVPGDLVVNILLAAA 258
+ V +AA
Sbjct: 203 V---RDVAEGHIAAM 214
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 565 LDEKAKEVLREDVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFI 621
L+ + V+ + +++V H+AA V + FE N GT LL+ A + + F+
Sbjct: 19 LERGHEVVVIDRLDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKA-GVKRFV 77
Query: 622 YVSTA--YSNCNIKKIEEKFY-EPL--Y--THIEMEQIINS 655
Y S+A Y + EE+ PL Y + + E ++ S
Sbjct: 78 YASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRS 118
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1217 | |||
| KOG1221|consensus | 467 | 100.0 | ||
| KOG1221|consensus | 467 | 100.0 | ||
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.95 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.94 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.94 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.91 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.91 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.9 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.9 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.9 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.9 | |
| KOG0747|consensus | 331 | 99.87 | ||
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.86 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.86 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.85 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.85 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.83 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.83 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.83 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.83 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.82 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.81 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.81 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.81 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.8 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.8 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.8 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.79 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.79 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.79 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.79 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.79 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.79 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.78 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.78 | |
| KOG1502|consensus | 327 | 99.78 | ||
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.78 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.78 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.77 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.77 | |
| KOG1429|consensus | 350 | 99.76 | ||
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.75 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.75 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.75 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.75 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.75 | |
| KOG1430|consensus | 361 | 99.74 | ||
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.73 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.72 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.71 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.71 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.71 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.7 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.69 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.65 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.65 | |
| KOG1371|consensus | 343 | 99.65 | ||
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.63 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.62 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.6 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.59 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.57 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.56 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.56 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.55 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.55 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.54 | |
| KOG0747|consensus | 331 | 99.53 | ||
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.52 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.51 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.51 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.5 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.49 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.48 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.48 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.48 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.47 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.44 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.44 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.42 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.41 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.41 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.41 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.41 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.4 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.39 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.37 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.37 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.36 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.35 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.35 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.34 | |
| KOG1502|consensus | 327 | 99.33 | ||
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.32 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.32 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.32 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.31 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.29 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.27 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.27 | |
| KOG1429|consensus | 350 | 99.27 | ||
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.26 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.25 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.24 | |
| KOG1430|consensus | 361 | 99.24 | ||
| KOG1431|consensus | 315 | 99.2 | ||
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.19 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.16 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.14 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.13 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.12 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.12 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.11 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.08 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.03 | |
| KOG2865|consensus | 391 | 99.01 | ||
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.0 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.99 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.96 | |
| KOG1371|consensus | 343 | 98.96 | ||
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 98.93 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.91 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.91 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 98.88 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 98.87 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.84 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 98.8 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.79 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 98.79 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 98.75 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.74 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.73 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.73 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.73 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.7 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.7 | |
| KOG2774|consensus | 366 | 98.69 | ||
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.68 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.68 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.68 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.67 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 98.63 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.61 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.6 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.59 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.58 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.58 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.56 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.54 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.54 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 98.54 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.51 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 98.51 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.51 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.49 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.49 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 98.49 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.45 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.45 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.45 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.43 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.43 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.42 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.4 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.4 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.39 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.38 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.36 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.34 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.34 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.33 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.33 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.31 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.3 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.28 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.27 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.27 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.24 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.2 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.18 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.17 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.17 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.17 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.15 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.12 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.12 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.12 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.11 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.11 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.1 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.09 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.09 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.08 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.08 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.07 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.07 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.07 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.07 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.06 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.06 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.05 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.05 | |
| KOG1372|consensus | 376 | 98.05 | ||
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.04 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.03 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.03 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.01 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.0 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 98.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.99 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.99 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.98 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.95 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.95 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 97.94 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.94 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.92 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.91 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.91 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.9 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.9 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.89 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 97.89 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.89 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.88 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 97.88 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.87 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 97.86 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.86 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 97.85 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.85 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.84 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.83 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.83 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.81 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 97.81 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 97.8 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.79 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.79 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 97.78 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.78 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 97.77 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 97.77 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 97.77 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 97.77 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.76 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.75 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 97.74 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.73 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 97.72 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.72 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.72 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.72 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.72 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 97.72 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.71 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.7 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 97.7 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 97.69 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.69 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.68 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.68 | |
| KOG4288|consensus | 283 | 97.68 | ||
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 97.67 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.67 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.67 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.67 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 97.66 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 97.65 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 97.64 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 97.64 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 97.64 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 97.63 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 97.62 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 97.6 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.6 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 97.59 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.59 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.58 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.57 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.57 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 97.56 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 97.55 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 97.54 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.54 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.53 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 97.53 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.52 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.51 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.5 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 97.5 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.5 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.5 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 97.5 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 97.49 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.48 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.48 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 97.47 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.47 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.45 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.44 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 97.43 | |
| KOG1431|consensus | 315 | 97.43 | ||
| PRK06194 | 287 | hypothetical protein; Provisional | 97.43 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 97.43 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 97.42 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.42 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.42 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.41 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.41 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.41 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 97.41 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.4 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.39 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 97.39 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 97.38 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 97.38 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.37 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.36 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.36 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.36 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.36 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 97.35 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 97.34 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 97.33 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.33 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 97.33 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.32 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 97.32 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 97.32 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 97.31 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.31 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.3 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.29 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 97.29 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.29 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.29 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.29 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.28 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.28 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.28 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 97.27 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 97.27 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 97.27 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 97.27 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 97.25 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.24 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.24 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.23 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.21 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.2 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.2 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.19 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.19 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 97.18 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.18 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.18 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.18 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.17 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.17 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.17 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 97.15 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 97.15 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.15 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.14 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.14 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.14 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 97.14 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 97.14 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.13 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.12 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.12 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.11 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 97.11 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 97.1 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 97.1 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.09 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 97.08 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.08 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.08 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.07 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 97.07 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 97.06 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.05 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.0 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 96.99 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.99 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 96.99 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 96.98 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 96.98 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 96.98 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 96.97 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 96.97 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 96.97 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 96.95 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 96.95 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 96.94 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 96.94 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.93 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 96.93 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.93 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 96.93 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.91 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 96.91 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 96.91 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.9 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 96.89 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 96.88 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 96.88 | |
| PLN00015 | 308 | protochlorophyllide reductase | 96.88 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 96.87 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 96.86 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 96.86 | |
| KOG4039|consensus | 238 | 96.86 | ||
| PRK08017 | 256 | oxidoreductase; Provisional | 96.83 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 96.82 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 96.81 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.79 | |
| KOG2865|consensus | 391 | 96.75 | ||
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.75 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.75 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 96.74 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 96.74 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 96.72 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 96.71 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.71 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.71 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.69 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 96.69 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.69 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.67 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.66 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.65 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.65 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.64 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.63 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.63 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.62 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 96.61 | |
| KOG1205|consensus | 282 | 96.6 | ||
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 96.6 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 96.6 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 96.58 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 96.55 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 96.54 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 96.54 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.53 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 96.52 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 96.5 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.46 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.44 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 96.43 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 96.43 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 96.41 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.34 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 96.33 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 96.28 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.27 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 96.24 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.23 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.21 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.2 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 96.15 | |
| KOG2774|consensus | 366 | 96.15 | ||
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.09 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 96.08 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.08 |
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-82 Score=739.55 Aligned_cols=429 Identities=31% Similarity=0.527 Sum_probs=392.3
Q ss_pred HHHHhhcccccccccc---cccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEE
Q psy13944 505 FHLNLHRSLSKYAIHV---PDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVF 581 (1217)
Q Consensus 505 Y~~~~~~GirvYlLkr---~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVf 581 (1217)
-++....--++|+|.| +.+..+|++...++++|+.+++.+|+..+|+.+|.||+++++||++++|++.+.++||+||
T Consensus 32 lLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivi 111 (467)
T KOG1221|consen 32 LLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISESDLRTLADEVNIVI 111 (467)
T ss_pred HHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCChHHHHHHHhcCCEEE
Confidence 3444433348999965 4677899999999999999999999999999999999999999999999999999999999
Q ss_pred EcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcccccccccCCCC--ChhHHHHHHhhCCcc
Q psy13944 582 HVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY--THIEMEQIINSCSHT 659 (1217)
Q Consensus 582 H~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~--~p~~~~~l~~~~~~~ 659 (1217)
|+||+++|+++++.+..+|+.||++++++|+++++++.||||||+||+|....++|++|+.+. ++++++++.++++++
T Consensus 112 h~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~ 191 (467)
T KOG1221|consen 112 HSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDE 191 (467)
T ss_pred EeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHhhhccchHH
Confidence 999999999999999999999999999999999999999999999999988899999999887 899999999999999
Q ss_pred hhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccchhhhhhhhccccCCcccccccccc
Q psy13944 660 ELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVGETIADNRHQQNLHPLSRQEYIFSD 739 (1217)
Q Consensus 660 ~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~e~~~~~~~~~~~~~~~~~~~~~~~ 739 (1217)
.++++++++.++|||||++||++||.++..|.
T Consensus 192 ~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~------------------------------------------------ 223 (467)
T KOG1221|consen 192 LLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA------------------------------------------------ 223 (467)
T ss_pred HHHHhhHHhcCCCCCceeehHhhHHHHHHhhc------------------------------------------------
Confidence 99999999999999999999999888884431
Q ss_pred CCccccccccchhhhhccccCccccCCCeeEEeecccccCccccCCcccccccccccccccccccCCCCccccCCCcccc
Q psy13944 740 TGCFFSINLHSLCMIEKKVQPNINTTLPYSVALTVSTNTSDKTMGNNSVHGSLKRRRKKSIEEITDDPFKSEENAPQTIL 819 (1217)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 819 (1217)
.+||++|+| |
T Consensus 224 ------------------------~~lPivIiR------------------------------------------P---- 233 (467)
T KOG1221|consen 224 ------------------------ENLPLVIIR------------------------------------------P---- 233 (467)
T ss_pred ------------------------cCCCeEEEc------------------------------------------C----
Confidence 247777777 4
Q ss_pred ccccccCCcccchhhhhcccchhhhhhhcccccCCCcccccCCchHHHHHHHHhcceeeeeecCCCcccceeeHHHHHHH
Q psy13944 820 DFYDKRDEDALSDKLIEFDAEESEIQAFYKVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNI 899 (1217)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gw~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpvD~vv~a 899 (1217)
|+|.| +++||+|||+||.+||+|++.++|+|++|.+.+|.+.++|+||||+|||+
T Consensus 234 ----------------------siI~s---t~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~ 288 (467)
T KOG1221|consen 234 ----------------------SIITS---TYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNA 288 (467)
T ss_pred ----------------------Cceec---cccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHH
Confidence 44444 68999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccccccccchhhhccCCCCchhhhhhhhcccccccccCCccCCcccchhhhhhhhhhhcccCCCC
Q psy13944 900 LLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIKQNIKEKFIDKYNNNV 979 (1217)
Q Consensus 900 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 (1217)
+|+++|+++...+
T Consensus 289 ~ia~~~~~~~~~~------------------------------------------------------------------- 301 (467)
T KOG1221|consen 289 MIASAWQHAGNSK------------------------------------------------------------------- 301 (467)
T ss_pred HHHHHHHHhccCC-------------------------------------------------------------------
Confidence 9999999875410
Q ss_pred CCCCcccccccccccccccccccccccCCCCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhccccccCccccccccc
Q psy13944 980 PDTDDSFKMSTQTQNLADSVISNQSVSNKSNGEHSDRIYHMVSCVENPIALGKSTELTIYYSNQAKEGCEKSLWCIHHNP 1059 (1217)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vy~~~s~~~npi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1217)
...++|||||||..||++|+++.+.+..|.... |+++.+|||.+.+
T Consensus 302 --------------------------------~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~--Pl~~~iw~P~~~~ 347 (467)
T KOG1221|consen 302 --------------------------------EKTPPIYHLTSSNDNPVTWGDFIELALRYFEKI--PLEKMIWYPFGTL 347 (467)
T ss_pred --------------------------------CCCCcEEEecccccCcccHHHHHHHHHHhcccC--CcccceeccCcee
Confidence 013579999999999999999999999998765 8999999999999
Q ss_pred ccchHHHHHHHHHHHhhhHHHHHHHHHHhhCCchhHHHHHHHHHHHHhhccccccCeEEeechhHHHHHhhcCccccccc
Q psy13944 1060 TGKKWLYFTYFYLYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTLNSKDRKMF 1139 (1217)
Q Consensus 1060 ~~~~~~~~~~~~~~~~lPa~l~~d~~~~l~g~kp~l~k~~~k~~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~Dr~~F 1139 (1217)
++|.|.|.++++++|++||++ +|+++++.|+||+++|+|+|++++.++++||++++|+|+++|+.+|++.|+++||++|
T Consensus 348 ~sn~~~f~~~~~~~h~lPa~~-~d~~~~i~g~k~~~~k~~~ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d~~~f 426 (467)
T KOG1221|consen 348 TSNPWLFNLAAFLYHTLPAYI-LDLLLRLLGKKPRLVKLYRKIHKLVKLLEPFSLFKWIFDNKNTEKLREKMSEEDKRLF 426 (467)
T ss_pred eecHhHHHHHHHHHHHhhHHH-HHHHHHHhCCChhhhHHHHHHHHHHHhhhhheeceEEecCccHHHHHHhCCHHHHhhc
Confidence 999999999999999999995 6999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCHHHHHHHHHHHHHHhhcCCCc-CchhHHHHHH
Q psy13944 1140 GFSMKKVSWLFFHLNLHRSLSKYAIHVPV-TKKLYVTKHR 1178 (1217)
Q Consensus 1140 ~fD~~~i~W~~Y~~~~~~g~~~y~~~~~~-~~~~~~~~~~ 1178 (1217)
+||++.+||++|+.+++.|+|+|++||+. +.+.++++++
T Consensus 427 ~fd~~~ldW~ey~~~~i~G~r~~llKe~~e~l~~~r~~~k 466 (467)
T KOG1221|consen 427 NFDMKQLDWEEYFNRHLLGLRKYLLKESPESLPQARKRLK 466 (467)
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHhcCChhhhHHHHHhhc
Confidence 99999999999999999999999999987 5555555443
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-81 Score=729.10 Aligned_cols=421 Identities=32% Similarity=0.556 Sum_probs=405.8
Q ss_pred cCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcccCH
Q psy13944 11 NGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHF 90 (1217)
Q Consensus 11 tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e~l 90 (1217)
-..|+|+|+++++|+.+.+++++|+.+++.+|+..+|+.+|.||+++++||++++|++.+.++||+|||+||+++|++++
T Consensus 44 lLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l 123 (467)
T KOG1221|consen 44 LLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPL 123 (467)
T ss_pred EEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhh
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCC--ChHHHHHHhhcCCcccccccccccCCC
Q psy13944 91 QTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY--THIEMEQIINSCSHTELTVLNDILIKP 168 (1217)
Q Consensus 91 ~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~--dp~~~~~~~~~l~d~~~~~~tp~~~~~ 168 (1217)
+.++.+|+.||++++++|++|++++.|+|+||||+++....++|++|+.+. ++++++++.++++++.++..+|++.++
T Consensus 124 ~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~ 203 (467)
T KOG1221|consen 124 DVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGG 203 (467)
T ss_pred hhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCC
Confidence 999999999999999999999999999999999999888899999999997 899999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHH
Q psy13944 169 MPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGD 248 (1217)
Q Consensus 169 ~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVD 248 (1217)
|||||++||++||+++.+++.++|++|+||++|+++++||+|||++|.+||.+++.++++|+++.+.++++..+|+||||
T Consensus 204 ~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD 283 (467)
T KOG1221|consen 204 WPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVD 283 (467)
T ss_pred CCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHHHhhchhhhcc
Q psy13944 249 LVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIKQNIKEKFIDK 328 (1217)
Q Consensus 249 dVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia~~~g~~~~~~ 328 (1217)
+|||++++++|+.+. +..
T Consensus 284 ~vvN~~ia~~~~~~~----~~~---------------------------------------------------------- 301 (467)
T KOG1221|consen 284 MVVNAMIASAWQHAG----NSK---------------------------------------------------------- 301 (467)
T ss_pred HHHHHHHHHHHHHhc----cCC----------------------------------------------------------
Confidence 999999999987665 100
Q ss_pred cCCCCCCCCCccchhhhhhccccccccccccCcCCCCCCCCcEEeecCCCCcccchhHHHHHHHHHhhccccccCCcccc
Q psy13944 329 YNNNVPDTDDSFKMSTQTQNLADSVISNQSVSNKSNGEHSDRIYHMVSCVENPIALGKSTELTIYYSNQAKEGCEKSLWC 408 (1217)
Q Consensus 329 ~~~~~~~~~~~~~~~~t~~~l~~s~~~~~~~~~~~~~~~~~~vYn~~s~~~npitw~~~~~~~~~~~~~~~~p~~~~~w~ 408 (1217)
.++++||||+||..||++|+++.+.+..++.+ +|+++.+||
T Consensus 302 -------------------------------------~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~--~Pl~~~iw~ 342 (467)
T KOG1221|consen 302 -------------------------------------EKTPPIYHLTSSNDNPVTWGDFIELALRYFEK--IPLEKMIWY 342 (467)
T ss_pred -------------------------------------CCCCcEEEecccccCcccHHHHHHHHHHhccc--CCcccceec
Confidence 02568999999999999999999999999998 999999999
Q ss_pred cccccccchHHHHHHHHHHHHhhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhhcccCeeEeccccHHHHHHHcCcc
Q psy13944 409 IHHNPTGKKWLYFTYFYLYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTLNSK 488 (1217)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~~g~k~~~~k~~~k~~~~~~~~~~F~~~~w~f~~~n~~~L~~~l~~~ 488 (1217)
|.+.+++|.|.|.++++++|+|||+++| +++++.|+||+++|+|+|++++..+++||++++|.|+++|+.+|++.||++
T Consensus 343 P~~~~~sn~~~f~~~~~~~h~lPa~~~d-~~~~i~g~k~~~~k~~~ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~ 421 (467)
T KOG1221|consen 343 PFGTLTSNPWLFNLAAFLYHTLPAYILD-LLLRLLGKKPRLVKLYRKIHKLVKLLEPFSLFKWIFDNKNTEKLREKMSEE 421 (467)
T ss_pred cCceeeecHhHHHHHHHHHHHhhHHHHH-HHHHHhCCChhhhHHHHHHHHHHHhhhhheeceEEecCccHHHHHHhCCHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCccccCCHHHHHHHhhccccccccccccccccccccccc
Q psy13944 489 DRKMFGFSMKKVSWLFFHLNLHRSLSKYAIHVPDLTKSRLRDFFA 533 (1217)
Q Consensus 489 d~~~F~fd~~~~~W~~Y~~~~~~GirvYlLkr~~stleRarkilk 533 (1217)
||++|+||++.+||++|+.+++.|+|.|++|++.++.++++++++
T Consensus 422 d~~~f~fd~~~ldW~ey~~~~i~G~r~~llKe~~e~l~~~r~~~k 466 (467)
T KOG1221|consen 422 DKRLFNFDMKQLDWEEYFNRHLLGLRKYLLKESPESLPQARKRLK 466 (467)
T ss_pred HHhhcCCCcccCCHHHHHHHHHHHHHHHHhcCChhhhHHHHHhhc
Confidence 999999999999999999999999999999999999888887764
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-64 Score=611.87 Aligned_cols=402 Identities=20% Similarity=0.318 Sum_probs=338.9
Q ss_pred ccccccccc---ccccccc-ccccchhhhhhhhcCcCC-----cCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcC
Q psy13944 514 SKYAIHVPD---LTKSRLR-DFFADDAFDLLRKENVNF-----TERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVA 584 (1217)
Q Consensus 514 rvYlLkr~~---stleRar-kilk~~vfd~l~~~~~~~-----~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~A 584 (1217)
++|||.|+. +..+|++ ++++.++|+++++..+.. .+|++++.||+++++|||++++++.+.+++|+|||+|
T Consensus 148 kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~A 227 (605)
T PLN02503 148 KIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSA 227 (605)
T ss_pred EEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECc
Confidence 899998764 4566774 677789999998876542 5799999999999999999999999999999999999
Q ss_pred ccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc-cccccccC-------------------CCC
Q psy13944 585 ATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-KIEEKFYE-------------------PLY 644 (1217)
Q Consensus 585 A~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~-~I~E~~y~-------------------~p~ 644 (1217)
|.++|+++++.+.++|+.||.+|+++|++++++++|||+||+||||+.. .+.|+.|+ ++.
T Consensus 228 A~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~ 307 (605)
T PLN02503 228 ANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPAL 307 (605)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccC
Confidence 9999999999999999999999999999987789999999999999986 89999996 456
Q ss_pred ChhHHHHHH----h--hCCcchhhh-----hhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCc
Q psy13944 645 THIEMEQII----N--SCSHTELTV-----LNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHP 713 (1217)
Q Consensus 645 ~p~~~~~l~----~--~~~~~~~~~-----~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~ 713 (1217)
|+...+++. + ..+++..+. +++.++++|||||++||++||.+|+.+.
T Consensus 308 d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~---------------------- 365 (605)
T PLN02503 308 DIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMR---------------------- 365 (605)
T ss_pred CHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhc----------------------
Confidence 777777766 2 222233333 5667899999999999999888884321
Q ss_pred cchhhhhhhhccccCCccccccccccCCccccccccchhhhhccccCccccCCCeeEEeecccccCccccCCcccccccc
Q psy13944 714 VGETIADNRHQQNLHPLSRQEYIFSDTGCFFSINLHSLCMIEKKVQPNINTTLPYSVALTVSTNTSDKTMGNNSVHGSLK 793 (1217)
Q Consensus 714 v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~i~r~~~~~~~~~~~~~~~~~~~~~ 793 (1217)
.+||++|+|
T Consensus 366 --------------------------------------------------~~LPv~IvR--------------------- 374 (605)
T PLN02503 366 --------------------------------------------------GDIPVVIIR--------------------- 374 (605)
T ss_pred --------------------------------------------------CCCCEEEEc---------------------
Confidence 247777777
Q ss_pred cccccccccccCCCCccccCCCccccccccccCCcccchhhhhcccchhhhhhhcccccCCCcccccCCchHHHHHHHHh
Q psy13944 794 RRRKKSIEEITDDPFKSEENAPQTILDFYDKRDEDALSDKLIEFDAEESEIQAFYKVVEEPCPMWVKGMNGLTAMYVAVG 873 (1217)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gw~~~~~g~~~~~~~~~ 873 (1217)
| |+|.+ +|+||+|||++|.++.++++..+|
T Consensus 375 ---------------------P--------------------------siV~s---t~~eP~pGw~d~~~~~~p~~~~~g 404 (605)
T PLN02503 375 ---------------------P--------------------------SVIES---TWKDPFPGWMEGNRMMDPIVLYYG 404 (605)
T ss_pred ---------------------C--------------------------CEecc---cccCCccccccCccccchhhhhee
Confidence 4 33333 689999999999444444445567
Q ss_pred cceeeeeecCCCcccceeeHHHHHHHHHHHHHHHHHhhcccccccccccchhhhccCCCCchhhhhhhhcccccccccCC
Q psy13944 874 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGN 953 (1217)
Q Consensus 874 ~g~~~~~~~~~~~~~d~vpvD~vv~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1217)
+|+++.+++|++..+|+||||+||||+|+|+|......
T Consensus 405 ~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~------------------------------------------ 442 (605)
T PLN02503 405 KGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAA------------------------------------------ 442 (605)
T ss_pred ccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhccc------------------------------------------
Confidence 99999999999999999999999999999976532110
Q ss_pred ccCCcccchhhhhhhhhhhcccCCCCCCCCcccccccccccccccccccccccCCCCCCCCCcEEEecCCCCCcccHHHH
Q psy13944 954 YDTTNHVNYIKQNIKEKFIDKYNNNVPDTDDSFKMSTQTQNLADSVISNQSVSNKSNGEHSDRIYHMVSCVENPIALGKS 1033 (1217)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vy~~~s~~~npi~~~~~ 1033 (1217)
....+||||||+..||++|+++
T Consensus 443 ----------------------------------------------------------~~~~~vYn~ts~~~nP~t~~~~ 464 (605)
T PLN02503 443 ----------------------------------------------------------KPEINVYQIASSVVNPLVFQDL 464 (605)
T ss_pred ----------------------------------------------------------CCCCCEEEeCCCCCCCeEHHHH
Confidence 0023699999999999999999
Q ss_pred HHHHHHHhhhccccccCcccccccccccchHHHHHHHHHHHhhhHHHHHHHHHHhh-----CCchhHHHHHHHHHH----
Q psy13944 1034 TELTIYYSNQAKEGCEKSLWCIHHNPTGKKWLYFTYFYLYNLLPTLVFFVFLEKLS-----GKKAQLMKIYRKVFF---- 1104 (1217)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lPa~l~~d~~~~l~-----g~kp~l~k~~~k~~~---- 1104 (1217)
.+++..++.++ |+.+++|+|. ..+.+++++.+..+++|+ +.|+++++. |++|++++.++|+++
T Consensus 465 ~~~~~~~~~~~--P~~~~~~~~~-~~~~~~~~~~~~~~~~h~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 536 (605)
T PLN02503 465 ARLLYEHYKSS--PYMDSKGRPI-HVPPMKLFSSMEDFSSHL-----WRDALLRSGLAGMSSSDRKLSQKLENICAKSVE 536 (605)
T ss_pred HHHHHHHHhhC--CcccccCcce-eccCceehhhHHHHHHHH-----HHHHHHHHhhhcccccChHHHHHHHHHHHHHHH
Confidence 99999998876 7999999997 668999999999999996 247777764 489999998886555
Q ss_pred ----HHhhccccccCeEEeechhHHHHHhhcCcccccccccccccCCHHHHHHH-HHHHHHHhhcCC
Q psy13944 1105 ----LNTTIANFSINEWSFTNDNALKLFNTLNSKDRKMFGFSMKKVSWLFFHLN-LHRSLSKYAIHV 1166 (1217)
Q Consensus 1105 ----~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~Dr~~F~fD~~~i~W~~Y~~~-~~~g~~~y~~~~ 1166 (1217)
++++++||++++|.|+|+|+++|++.|+++||++|+||++.|||++|+.+ |+.|+|||++|+
T Consensus 537 ~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~Dr~~F~~D~~~idW~~Y~~~~~i~G~rky~lk~ 603 (605)
T PLN02503 537 QAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEEKAEFGFDVGSIDWRDYITNVHIPGLRRHVMKG 603 (605)
T ss_pred HHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHHhhccCCCcCCCCHHHHHHHhhhhHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999998 888999999986
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-63 Score=598.92 Aligned_cols=404 Identities=23% Similarity=0.365 Sum_probs=359.6
Q ss_pred CCCCCCcccHHHHHH-HHhcChhHHHhhhcCcccC-----CCeEEEEccCCCCCCCCCHHH-HHHhcCCccEEEEcCccC
Q psy13944 12 GAKTCKHNSILWVAK-DFFADDAFDRLRKENANFT-----ERIVVLTADLQSDGLGLDEKE-KKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 12 g~r~kkg~~~~eRL~-~~l~~~vfd~Lr~~~p~~~-----~kI~~V~GDl~d~~LGLs~ed-l~~L~~~VDiViH~AA~v 84 (1217)
..|+++++++++|+. ++.+.++|+++++..+... ++++++.||+++++|||++.+ ++.+++++|+|||+||.+
T Consensus 44 LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v 123 (491)
T PLN02996 44 LLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATT 123 (491)
T ss_pred EEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECcccc
Confidence 357888999999996 6888899999998776544 799999999999999998876 577889999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc-cccccccCCCC--------ChH--------HHH
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-KIEEKFYEPLY--------THI--------EME 147 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~-~I~E~~y~~p~--------dp~--------~~~ 147 (1217)
++++++..+.++|+.||.+|+++|++++++++|||+||++|||... .++|+.|+++. +++ ++.
T Consensus 124 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (491)
T PLN02996 124 NFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLK 203 (491)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHH
Confidence 9999999999999999999999999987899999999999998765 47888888654 443 233
Q ss_pred HHhhc-CCcccccc------cccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 148 QIINS-CSHTELTV------LNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 148 ~~~~~-l~d~~~~~------~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
+..++ ++++.++. ++++...+|||+|+.||++||+++.+++.++|++|+||++|+|++++|.+||+++++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~ 283 (491)
T PLN02996 204 ELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTID 283 (491)
T ss_pred HHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHH
Confidence 33333 55555542 566667899999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccce
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVN 300 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~ 300 (1217)
+++.++++|.++.++|++++.+|+|||||||+|+++++++... .
T Consensus 284 ~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~----~-------------------------------- 327 (491)
T PLN02996 284 SVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAG----G-------------------------------- 327 (491)
T ss_pred HHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhc----c--------------------------------
Confidence 9999999999999999999999999999999999999886322 0
Q ss_pred eeccCCccCchHHHHHHHHhhchhhhcccCCCCCCCCCccchhhhhhccccccccccccCcCCCCCCCCcEEeecCCCCc
Q psy13944 301 YEINHGNYDTTNHVNYIKQNIKEKFIDKYNNNVPDTDDSFKMSTQTQNLADSVISNQSVSNKSNGEHSDRIYHMVSCVEN 380 (1217)
Q Consensus 301 YnI~sg~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~l~~s~~~~~~~~~~~~~~~~~~vYn~~s~~~n 380 (1217)
.....|||++|+..|
T Consensus 328 -----------------------------------------------------------------~~~~~vYNi~s~~~~ 342 (491)
T PLN02996 328 -----------------------------------------------------------------QGSEIIYHVGSSLKN 342 (491)
T ss_pred -----------------------------------------------------------------CCCCcEEEecCCCCC
Confidence 012359999999999
Q ss_pred ccchhHHHHHHHHHhhccccccC----CcccccccccccchHHHHHHHHHHHHhhHHHHHHHHHH--hcCCcHHHHHHHH
Q psy13944 381 PIALGKSTELTIYYSNQAKEGCE----KSLWCIHHNPTGKKWLYFTYFYLYNLLPTLVFFVFLEK--LSGKKAQLMKIYR 454 (1217)
Q Consensus 381 pitw~~~~~~~~~~~~~~~~p~~----~~~w~~~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~--~~g~k~~~~k~~~ 454 (1217)
|++|+++.+.+.+++.+ +|+. +++|+|.++++++.++|.++.+++|.+|++++| ++.. +.|+||+++|+||
T Consensus 343 ~~s~~ei~~~~~~~~~~--~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~~~~~~~~~~~~ 419 (491)
T PLN02996 343 PVKFSNLHDFAYRYFSK--NPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQ-LVNIILPKRYGDKYTDLNR 419 (491)
T ss_pred cccHHHHHHHHHHHhhh--CCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHHH-HHHHHhhhccChHHHHHHH
Confidence 99999999999999998 9998 599999999999999999999999999999999 7777 6689999999999
Q ss_pred HH---HHHHHhhhhcccCeeEeccccHHHHHHHcCccc---cccccCccccCCHHHHHHH-hhccccccccc
Q psy13944 455 KV---FFLNTTIANFSINEWSFTNDNALKLFNTLNSKD---RKMFGFSMKKVSWLFFHLN-LHRSLSKYAIH 519 (1217)
Q Consensus 455 k~---~~~~~~~~~F~~~~w~f~~~n~~~L~~~l~~~d---~~~F~fd~~~~~W~~Y~~~-~~~GirvYlLk 519 (1217)
|+ ++++++++||++++|.|+++|+.+|++.|+++| |++|+||++.+||++|+++ |++|+|+|+||
T Consensus 420 ~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y~~~~~~~g~~~y~~k 491 (491)
T PLN02996 420 KIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNVHIPGLVKYVLK 491 (491)
T ss_pred HHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccCcccCCHHHHHHHhhHHHHHHHhcC
Confidence 99 666999999999999999999999999999955 9999999999999999999 99999999986
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-62 Score=598.53 Aligned_cols=401 Identities=20% Similarity=0.313 Sum_probs=353.2
Q ss_pred CCCCCCcccHHHHHH-HHhcChhHHHhhhcCccc-----CCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC
Q psy13944 12 GAKTCKHNSILWVAK-DFFADDAFDRLRKENANF-----TERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85 (1217)
Q Consensus 12 g~r~kkg~~~~eRL~-~~l~~~vfd~Lr~~~p~~-----~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~ 85 (1217)
-.|+++++++.+|+. ++++.++|+++++..+.. .+|++++.||+++++|||++++++.+.+++|+|||+||.++
T Consensus 152 LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~ 231 (605)
T PLN02503 152 LIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT 231 (605)
T ss_pred EEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc
Confidence 467889999999996 688889999999887653 68999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc-cccccccC-------------------CCCChHH
Q psy13944 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-KIEEKFYE-------------------PLYTHIE 145 (1217)
Q Consensus 86 f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~-~I~E~~y~-------------------~p~dp~~ 145 (1217)
|+++++.+.++|+.||.+++++|++++++++|||+||+||||+.. .++|+.|+ ++.|+++
T Consensus 232 f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~ 311 (605)
T PLN02503 232 FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEA 311 (605)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHH
Confidence 999999999999999999999999988899999999999999985 69999997 4568888
Q ss_pred HHHHh----h--cCCcccccc-----cccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCccccc
Q psy13944 146 MEQII----N--SCSHTELTV-----LNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 146 ~~~~~----~--~l~d~~~~~-----~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
++++. + +.+++..+. ++++++.+|||+|++||++||+++.++..++|++|+||++|.+++++|+|||.+
T Consensus 312 ~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d 391 (605)
T PLN02503 312 EIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWME 391 (605)
T ss_pred HHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCcccccc
Confidence 88776 2 222233333 677899999999999999999999998899999999999999999999999999
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESI 294 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~ 294 (1217)
+.......+..+++|.++.++++++...|+||||+||||+++|++.... . .
T Consensus 392 ~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~----~-~------------------------ 442 (605)
T PLN02503 392 GNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG----A-A------------------------ 442 (605)
T ss_pred CccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc----c-c------------------------
Confidence 9443333334456999999999999999999999999999998654222 0 0
Q ss_pred hhccceeeccCCccCchHHHHHHHHhhchhhhcccCCCCCCCCCccchhhhhhccccccccccccCcCCCCCCCCcEEee
Q psy13944 295 KKLDVNYEINHGNYDTTNHVNYIKQNIKEKFIDKYNNNVPDTDDSFKMSTQTQNLADSVISNQSVSNKSNGEHSDRIYHM 374 (1217)
Q Consensus 295 ~~~g~~YnI~sg~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~l~~s~~~~~~~~~~~~~~~~~~vYn~ 374 (1217)
....+||||
T Consensus 443 -----------------------------------------------------------------------~~~~~vYn~ 451 (605)
T PLN02503 443 -----------------------------------------------------------------------KPEINVYQI 451 (605)
T ss_pred -----------------------------------------------------------------------CCCCCEEEe
Confidence 013579999
Q ss_pred cCCCCcccchhHHHHHHHHHhhccccccCCcccccccccccchHHHHHHHHHHHHhhHHHHHHHHHHhc-----CCcHHH
Q psy13944 375 VSCVENPIALGKSTELTIYYSNQAKEGCEKSLWCIHHNPTGKKWLYFTYFYLYNLLPTLVFFVFLEKLS-----GKKAQL 449 (1217)
Q Consensus 375 ~s~~~npitw~~~~~~~~~~~~~~~~p~~~~~w~~~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~~-----g~k~~~ 449 (1217)
+|+..||++|+++.+.+.+++.+ +|+.+++|+|. ..+.+++.+.+..|++|+ +.| +++++. |++|++
T Consensus 452 ts~~~nP~t~~~~~~~~~~~~~~--~P~~~~~~~~~-~~~~~~~~~~~~~~~~h~----~~d-~~~~~~~~~~~~~~~~~ 523 (605)
T PLN02503 452 ASSVVNPLVFQDLARLLYEHYKS--SPYMDSKGRPI-HVPPMKLFSSMEDFSSHL----WRD-ALLRSGLAGMSSSDRKL 523 (605)
T ss_pred CCCCCCCeEHHHHHHHHHHHHhh--CCcccccCcce-eccCceehhhHHHHHHHH----HHH-HHHHHhhhcccccChHH
Confidence 99999999999999999999999 99999999997 669999999999999995 688 777764 589999
Q ss_pred HHHHHHHHH--------HHHhhhhcccCeeEeccccHHHHHHHcCccccccccCccccCCHHHHHHH-hhcccccccccc
Q psy13944 450 MKIYRKVFF--------LNTTIANFSINEWSFTNDNALKLFNTLNSKDRKMFGFSMKKVSWLFFHLN-LHRSLSKYAIHV 520 (1217)
Q Consensus 450 ~k~~~k~~~--------~~~~~~~F~~~~w~f~~~n~~~L~~~l~~~d~~~F~fd~~~~~W~~Y~~~-~~~GirvYlLkr 520 (1217)
.+.++|+++ ++++++||++++|.|+++|+++|++.|+++||++|+||++.|||++||++ |++|+|+|++|+
T Consensus 524 ~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~Dr~~F~~D~~~idW~~Y~~~~~i~G~rky~lk~ 603 (605)
T PLN02503 524 SQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEEKAEFGFDVGSIDWRDYITNVHIPGLRRHVMKG 603 (605)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHHhhccCCCcCCCCHHHHHHHhhhhHHHHHHhcc
Confidence 998886655 89999999999999999999999999999999999999999999999997 999999999985
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-61 Score=580.95 Aligned_cols=406 Identities=23% Similarity=0.359 Sum_probs=341.3
Q ss_pred ccccccccccc---cccccc-ccccchhhhhhhhcCcCCc-----CcEEEEEcccCCCCCCCCHHH-HHHHhcCccEEEE
Q psy13944 513 LSKYAIHVPDL---TKSRLR-DFFADDAFDLLRKENVNFT-----ERIVVLTADLQSDGLGLDEKA-KEVLREDVNIVFH 582 (1217)
Q Consensus 513 irvYlLkr~~s---tleRar-kilk~~vfd~l~~~~~~~~-----~kV~~V~GDltd~~LGLs~~~-~~~L~~~vdvVfH 582 (1217)
.++|||.|+.+ .++|++ ++.+..+|+++++..++.. ++++++.||+++++|||++.+ ++.+.+++|+|||
T Consensus 39 ~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH 118 (491)
T PLN02996 39 KKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVN 118 (491)
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEE
Confidence 37999988654 445553 5677788988877655433 789999999999999998776 6778889999999
Q ss_pred cCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc-cccccccCCCC--------Chh------
Q psy13944 583 VAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-KIEEKFYEPLY--------THI------ 647 (1217)
Q Consensus 583 ~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~-~I~E~~y~~p~--------~p~------ 647 (1217)
+||.+++++++..+.++|+.||.+|+++|++++++++|||+||++|||... .++|+.|+++. ++.
T Consensus 119 ~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~ 198 (491)
T PLN02996 119 LAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLV 198 (491)
T ss_pred CccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHH
Confidence 999999999999999999999999999999987789999999999998765 68898887554 332
Q ss_pred --HHHHHHhh-CCcchhhh------hhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccchhh
Q psy13944 648 --EMEQIINS-CSHTELTV------LNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 648 --~~~~l~~~-~~~~~~~~------~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
.+.++.+. ++++.++. +++.+..++||+|++||++||.++..|.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~--------------------------- 251 (491)
T PLN02996 199 KEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFK--------------------------- 251 (491)
T ss_pred HHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhc---------------------------
Confidence 12233332 44444442 5666678999999999999888885432
Q ss_pred hhhhhccccCCccccccccccCCccccccccchhhhhccccCccccCCCeeEEeecccccCccccCCccccccccccccc
Q psy13944 719 ADNRHQQNLHPLSRQEYIFSDTGCFFSINLHSLCMIEKKVQPNINTTLPYSVALTVSTNTSDKTMGNNSVHGSLKRRRKK 798 (1217)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1217)
.+||++|+|
T Consensus 252 ---------------------------------------------~~lpv~i~R-------------------------- 260 (491)
T PLN02996 252 ---------------------------------------------ENLPLVIIR-------------------------- 260 (491)
T ss_pred ---------------------------------------------CCCCEEEEC--------------------------
Confidence 146666666
Q ss_pred ccccccCCCCccccCCCccccccccccCCcccchhhhhcccchhhhhhhcccccCCCcccccCCchHHHHHHHHhcceee
Q psy13944 799 SIEEITDDPFKSEENAPQTILDFYDKRDEDALSDKLIEFDAEESEIQAFYKVVEEPCPMWVKGMNGLTAMYVAVGLGIMR 878 (1217)
Q Consensus 799 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gw~~~~~g~~~~~~~~~~g~~~ 878 (1217)
|.+| .+ ++++|+|||+++++|+.+++.++++|.++
T Consensus 261 ----------------P~~V--------------------------~G---~~~~p~~gwi~~~~~~~~i~~~~~~g~~~ 295 (491)
T PLN02996 261 ----------------PTMI--------------------------TS---TYKEPFPGWIEGLRTIDSVIVGYGKGKLT 295 (491)
T ss_pred ----------------CCEe--------------------------cc---CCcCCCCCcccchhhHHHHHHHhccceEe
Confidence 3333 22 57999999999999999999999999999
Q ss_pred eeecCCCcccceeeHHHHHHHHHHHHHHHHHhhcccccccccccchhhhccCCCCchhhhhhhhcccccccccCCccCCc
Q psy13944 879 TVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTN 958 (1217)
Q Consensus 879 ~~~~~~~~~~d~vpvD~vv~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1217)
.++||+++.+|+||||+||||+++++|+.+...
T Consensus 296 ~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~----------------------------------------------- 328 (491)
T PLN02996 296 CFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQ----------------------------------------------- 328 (491)
T ss_pred EEecCCCeecceecccHHHHHHHHHHHHhhccC-----------------------------------------------
Confidence 999999999999999999999999998742100
Q ss_pred ccchhhhhhhhhhhcccCCCCCCCCcccccccccccccccccccccccCCCCCCCCCcEEEecCCCCCcccHHHHHHHHH
Q psy13944 959 HVNYIKQNIKEKFIDKYNNNVPDTDDSFKMSTQTQNLADSVISNQSVSNKSNGEHSDRIYHMVSCVENPIALGKSTELTI 1038 (1217)
Q Consensus 959 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vy~~~s~~~npi~~~~~~~~~~ 1038 (1217)
....|||++|+..||++|+++.+.+.
T Consensus 329 ------------------------------------------------------~~~~vYNi~s~~~~~~s~~ei~~~~~ 354 (491)
T PLN02996 329 ------------------------------------------------------GSEIIYHVGSSLKNPVKFSNLHDFAY 354 (491)
T ss_pred ------------------------------------------------------CCCcEEEecCCCCCcccHHHHHHHHH
Confidence 01259999999999999999999999
Q ss_pred HHhhhcccccc----CcccccccccccchHHHHHHHHHHHhhhHHHHHHHHHH--hhCCchhHHHHHHHH---HHHHhhc
Q psy13944 1039 YYSNQAKEGCE----KSLWCIHHNPTGKKWLYFTYFYLYNLLPTLVFFVFLEK--LSGKKAQLMKIYRKV---FFLNTTI 1109 (1217)
Q Consensus 1039 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lPa~l~~d~~~~--l~g~kp~l~k~~~k~---~~~~~~~ 1109 (1217)
.++... |+. +++|+|..++++++++|.++.+++|.+|+++ +|++.. +.|+||+++|++||+ +++++++
T Consensus 355 ~~~~~~--p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (491)
T PLN02996 355 RYFSKN--PWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKA-LQLVNIILPKRYGDKYTDLNRKIKLVMRLVDLY 431 (491)
T ss_pred HHhhhC--CCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHH-HHHHHHHhhhccChHHHHHHHHHHHHHHHHHHh
Confidence 998776 677 6999999999999999999999999999996 577777 677999999999999 7779999
Q ss_pred cccccCeEEeechhHHHHHhhcCccc---ccccccccccCCHHHHHHH-HHHHHHHhhcC
Q psy13944 1110 ANFSINEWSFTNDNALKLFNTLNSKD---RKMFGFSMKKVSWLFFHLN-LHRSLSKYAIH 1165 (1217)
Q Consensus 1110 ~~F~~~eW~F~~~n~~~L~~~l~~~D---r~~F~fD~~~i~W~~Y~~~-~~~g~~~y~~~ 1165 (1217)
+||++++|.|+|+|+++|++.|+++| |++|+||++.|||++|+.+ ++.|+|+|++|
T Consensus 432 ~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y~~~~~~~g~~~y~~k 491 (491)
T PLN02996 432 KPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNVHIPGLVKYVLK 491 (491)
T ss_pred hccccceEEEccHHHHHHHHHCCccccccccEeccCcccCCHHHHHHHhhHHHHHHHhcC
Confidence 99999999999999999999999955 9999999999999999999 77799999986
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=315.14 Aligned_cols=246 Identities=17% Similarity=0.111 Sum_probs=178.8
Q ss_pred CcccCCCCCCcccHHHHHHHHh-cChh--HHH------hhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhc--CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFF-ADDA--FDR------LRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLR--EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l-~~~v--fd~------Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~--~~VD 75 (1217)
.-.||+.+.-|..+.++|.+.. ...+ .++ +....+ ....+++++.||++++ +.+..++ .++|
T Consensus 9 VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~------~~~~~~~~~~~~D 82 (668)
T PLN02260 9 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASA------DLVNYLLITEGID 82 (668)
T ss_pred EEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCCh------HHHHHHHhhcCCC
Confidence 4589999999999999998752 2222 221 111011 1235789999999997 5665543 6799
Q ss_pred EEEEcCccCCccc---CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhc
Q psy13944 76 IVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 76 iViH~AA~v~f~e---~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
+|||+||....+. ....++++|+.||.+++++|++.+.+++|||+||+.+||....- ...+
T Consensus 83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~----~~~~------------ 146 (668)
T PLN02260 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED----ADVG------------ 146 (668)
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccc----cccC------------
Confidence 9999999876543 33568899999999999999986558999999999999864310 0000
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCc
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGI 230 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~ 230 (1217)
.+++ ... ...+.|+.||..+|+++..+. .+++++|+||++|||+.+.+ .. ....++..+..|.
T Consensus 147 ~~E~--~~~------~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~-----~~--~i~~~~~~a~~g~ 211 (668)
T PLN02260 147 NHEA--SQL------LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-----EK--LIPKFILLAMQGK 211 (668)
T ss_pred cccc--CCC------CCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc-----cc--HHHHHHHHHhCCC
Confidence 0000 000 112679999999999999876 68999999999999997533 11 1234455556666
Q ss_pred eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccC
Q psy13944 231 MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYD 309 (1217)
Q Consensus 231 l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s 309 (1217)
...+++++++.+++|||||+|+++..++..... ++.||++++ +++
T Consensus 212 ~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~----------------------------------~~vyni~~~~~~s 257 (668)
T PLN02260 212 PLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEV----------------------------------GHVYNIGTKKERR 257 (668)
T ss_pred CeEEecCCCceEeeEEHHHHHHHHHHHHhcCCC----------------------------------CCEEEECCCCeeE
Confidence 566788999999999999999999877653222 578999988 899
Q ss_pred chHHHHHHHHhhchh
Q psy13944 310 TTNHVNYIKQNIKEK 324 (1217)
Q Consensus 310 ~~el~~~ia~~~g~~ 324 (1217)
..|+++.+++.+|.+
T Consensus 258 ~~el~~~i~~~~g~~ 272 (668)
T PLN02260 258 VIDVAKDICKLFGLD 272 (668)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998864
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=269.53 Aligned_cols=216 Identities=29% Similarity=0.443 Sum_probs=144.1
Q ss_pred CCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcccCHH
Q psy13944 13 AKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQ 91 (1217)
Q Consensus 13 ~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e~l~ 91 (1217)
.|++++.++.+|+.+.+.. .+++...+ ...+||+++.||+++++|||++++++.|.+++|+||||||.++|..+++
T Consensus 29 vR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~ 105 (249)
T PF07993_consen 29 VRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYS 105 (249)
T ss_dssp E-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--
T ss_pred EeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcccch
Confidence 4677777889999875554 66664432 4578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc-ccccccCCCCChHHHHHHhhcCCcccccccccccCCCCC
Q psy13944 92 TAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK-IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMP 170 (1217)
Q Consensus 92 ~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~-I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~P 170 (1217)
.+.++||.||++|+++|.+.+. ++|+|+||+++.+.... +.|+.++. +.........++
T Consensus 106 ~~~~~NV~gt~~ll~la~~~~~-~~~~~iSTa~v~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~ 165 (249)
T PF07993_consen 106 ELRAVNVDGTRNLLRLAAQGKR-KRFHYISTAYVAGSRPGTIEEKVYPE-------------------EEDDLDPPQGFP 165 (249)
T ss_dssp EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HH-------------------H--EEE--TTSE
T ss_pred hhhhhHHHHHHHHHHHHHhccC-cceEEeccccccCCCCCccccccccc-------------------ccccchhhccCC
Confidence 9999999999999999997544 59999999888877553 44433220 001111245678
Q ss_pred ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccc-hhHHHHHHHhcCceeEEeeCCCceeccccH
Q psy13944 171 NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMN-GLTAMYVAVGLGIMRTVYQNTSNIVDMVPG 247 (1217)
Q Consensus 171 NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~-g~~~li~~~~~G~l~~i~g~~~~~~D~VpV 247 (1217)
|+|+.||++||+++++++ .|+|++|+||++|+| +|.+||.+... ++..+...+..|..+..+++++...|++||
T Consensus 166 ~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g---~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPV 242 (249)
T PF07993_consen 166 NGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG---DSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPV 242 (249)
T ss_dssp E-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE----SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEH
T ss_pred ccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc---cCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECH
Confidence 999999999999999988 599999999999999 46678888777 666777777888888888888888999999
Q ss_pred HHHHHHH
Q psy13944 248 DLVVNIL 254 (1217)
Q Consensus 248 DdVvnAi 254 (1217)
|+||++|
T Consensus 243 D~va~aI 249 (249)
T PF07993_consen 243 DYVARAI 249 (249)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 9999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=282.66 Aligned_cols=219 Identities=21% Similarity=0.278 Sum_probs=154.5
Q ss_pred cccCCCCCCcccHHHHHHHH-hcChhHHHhhhc--------Cccc-CCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDF-FADDAFDRLRKE--------NANF-TERIVVLTADLQSDGLGLDEKEKKVLREDVNIVF 78 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~-l~~~vfd~Lr~~--------~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiVi 78 (1217)
-.||+.+.-|..+.++|.+. -...+....|.. .... ..+++++.||++++.+|++.++++.+ +++|+||
T Consensus 4 LVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vi 82 (657)
T PRK07201 4 FVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVV 82 (657)
T ss_pred EEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCCEEE
Confidence 36888889999999998741 112221111110 0011 25799999999999999999888888 8999999
Q ss_pred EcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc-ccccccCCCCChHHHHHHhhcCCccc
Q psy13944 79 HVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK-IEEKFYEPLYTHIEMEQIINSCSHTE 157 (1217)
Q Consensus 79 H~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~-I~E~~y~~p~dp~~~~~~~~~l~d~~ 157 (1217)
||||..++........++|+.||.+++++|++. ++++|||+||..++|.... .+|...+.
T Consensus 83 h~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~~~~~e~~~~~------------------ 143 (657)
T PRK07201 83 HLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYEGVFREDDFDE------------------ 143 (657)
T ss_pred ECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCccCccccccchh------------------
Confidence 999998887777888999999999999999985 6799999999999885431 22211100
Q ss_pred ccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhH---HHHHHHhcC-ceeE
Q psy13944 158 LTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT---AMYVAVGLG-IMRT 233 (1217)
Q Consensus 158 ~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~---~li~~~~~G-~l~~ 233 (1217)
....++.|+.||+.+|+++.+. .+++++|+||++|||+... |..++..++. .++..+... ....
T Consensus 144 --------~~~~~~~Y~~sK~~~E~~~~~~-~g~~~~ilRp~~v~G~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (657)
T PRK07201 144 --------GQGLPTPYHRTKFEAEKLVREE-CGLPWRVYRPAVVVGDSRT---GEMDKIDGPYYFFKVLAKLAKLPSWLP 211 (657)
T ss_pred --------hcCCCCchHHHHHHHHHHHHHc-CCCcEEEEcCCeeeecCCC---CccccCCcHHHHHHHHHHhccCCcccc
Confidence 1123467999999999999864 5899999999999998643 3333333322 222222111 1112
Q ss_pred EeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 234 VYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 234 i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
+.+.+....+++||||++++++.++.
T Consensus 212 ~~~~~~~~~~~v~vddva~ai~~~~~ 237 (657)
T PRK07201 212 MVGPDGGRTNIVPVDYVADALDHLMH 237 (657)
T ss_pred cccCCCCeeeeeeHHHHHHHHHHHhc
Confidence 34555677899999999999987765
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=265.66 Aligned_cols=221 Identities=27% Similarity=0.368 Sum_probs=140.1
Q ss_pred ccccccccccc---cccccccccc-chhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCcccc
Q psy13944 513 LSKYAIHVPDL---TKSRLRDFFA-DDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVK 588 (1217)
Q Consensus 513 irvYlLkr~~s---tleRarkilk-~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~ 588 (1217)
+++|||.|+.+ ..+|+.+.+. ..+++.... ...+||+++.||+++++|||++++++.|.+++|+||||||.++
T Consensus 23 ~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~ 99 (249)
T PF07993_consen 23 VKIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVN 99 (249)
T ss_dssp TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-S
T ss_pred cEEEEEEeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCCChHHhhccccccceeeecchhhh
Confidence 49999999874 4556644443 344443321 2368999999999999999999999999999999999999999
Q ss_pred chhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhh
Q psy13944 589 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 667 (1217)
Q Consensus 589 f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~ 667 (1217)
|..+++++.++||.||++|+++|.+. +.++|+|+||+++.+... .++|+.++. +.....
T Consensus 100 ~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~~-------------------~~~~~~ 159 (249)
T PF07993_consen 100 FNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYPE-------------------EEDDLD 159 (249)
T ss_dssp BS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-HH-------------------H--EEE
T ss_pred hcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccccccc-------------------ccccch
Confidence 99999999999999999999999976 445999999988888765 455553311 001112
Q ss_pred ccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccchhhhhhhhccccCCccccccccccCCcccccc
Q psy13944 668 LIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVGETIADNRHQQNLHPLSRQEYIFSDTGCFFSIN 747 (1217)
Q Consensus 668 l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (1217)
....++|+|++||++||.++..+ +++
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a--------------------------------~~~---------------------- 185 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREA--------------------------------AQR---------------------- 185 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHH--------------------------------HHH----------------------
T ss_pred hhccCCccHHHHHHHHHHHHHHH--------------------------------Hhc----------------------
Confidence 24567899999999977777332 111
Q ss_pred ccchhhhhccccCccccCCCeeEEeecccccCccccCCcccccccccccccccccccCCCCccccCCCccccccccccCC
Q psy13944 748 LHSLCMIEKKVQPNINTTLPYSVALTVSTNTSDKTMGNNSVHGSLKRRRKKSIEEITDDPFKSEENAPQTILDFYDKRDE 827 (1217)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~lp~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 827 (1217)
.|+|++|+| |..|
T Consensus 186 ----------------~g~p~~I~R------------------------------------------p~~i--------- 198 (249)
T PF07993_consen 186 ----------------HGLPVTIYR------------------------------------------PGII--------- 198 (249)
T ss_dssp ----------------H---EEEEE------------------------------------------E-EE---------
T ss_pred ----------------CCceEEEEe------------------------------------------cCcc---------
Confidence 268889988 3233
Q ss_pred cccchhhhhcccchhhhhhhcccccCCCcccccCCc-hHHHHHHHHhcceeeeeecCCCcccceeeHHHHHHHH
Q psy13944 828 DALSDKLIEFDAEESEIQAFYKVVEEPCPMWVKGMN-GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNIL 900 (1217)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gw~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~vpvD~vv~a~ 900 (1217)
..+|.+||.+... ++..+...+.+|.++.+.++.+..+|+||||+||++|
T Consensus 199 -----------------------~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 199 -----------------------VGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp -----------------------E-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred -----------------------cccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 2478889988888 8888888999999999999988899999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-25 Score=209.44 Aligned_cols=94 Identities=31% Similarity=0.676 Sum_probs=91.7
Q ss_pred HHHhhhHHHHHHHHHHhhCCchhHHHHHHHHHHHHhhccccccCeEEeechhHHHHHhhcCcccccccccccccCCHHHH
Q psy13944 1072 LYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTLNSKDRKMFGFSMKKVSWLFF 1151 (1217)
Q Consensus 1072 ~~~~lPa~l~~d~~~~l~g~kp~l~k~~~k~~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~Dr~~F~fD~~~i~W~~Y 1151 (1217)
|+|.+||++ .|+++++.|+||+++|+++|++.++++++||+++||+|+|+|+.+|++.|+++||++|+||+++|||++|
T Consensus 1 ~~h~lPA~~-~D~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y 79 (94)
T PF03015_consen 1 LFHFLPAYL-LDLILRLFGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEY 79 (94)
T ss_pred CcchHHHHH-HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHH
Confidence 579999996 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCC
Q psy13944 1152 HLNLHRSLSKYAIHV 1166 (1217)
Q Consensus 1152 ~~~~~~g~~~y~~~~ 1166 (1217)
+.+++.|+|||++||
T Consensus 80 ~~~~~~G~rkyllke 94 (94)
T PF03015_consen 80 FRNYIPGIRKYLLKE 94 (94)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999997
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-25 Score=208.68 Aligned_cols=94 Identities=31% Similarity=0.670 Sum_probs=92.3
Q ss_pred HHHHhhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhhcccCeeEeccccHHHHHHHcCccccccccCccccCCHHHH
Q psy13944 426 LYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTLNSKDRKMFGFSMKKVSWLFF 505 (1217)
Q Consensus 426 ~~~~~pa~~~d~~~~~~~g~k~~~~k~~~k~~~~~~~~~~F~~~~w~f~~~n~~~L~~~l~~~d~~~F~fd~~~~~W~~Y 505 (1217)
|+|++||+++| +++++.|+||+++|+|+|+.+++++++||+++||.|+++|+.+|++.|+++||+.|+||++.|||++|
T Consensus 1 ~~h~lPA~~~D-~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y 79 (94)
T PF03015_consen 1 LFHFLPAYLLD-LILRLFGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEY 79 (94)
T ss_pred CcchHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHH
Confidence 57999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccccccc
Q psy13944 506 HLNLHRSLSKYAIHV 520 (1217)
Q Consensus 506 ~~~~~~GirvYlLkr 520 (1217)
++++++|+|+|++|+
T Consensus 80 ~~~~~~G~rkyllke 94 (94)
T PF03015_consen 80 FRNYIPGIRKYLLKE 94 (94)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999986
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-23 Score=227.19 Aligned_cols=250 Identities=16% Similarity=0.137 Sum_probs=196.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCC--eEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTER--IVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAAT 83 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~k--I~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~ 83 (1217)
-.||..+--|.+...-|.+...+ .++|+|...+.+...+ +.++.||+.|. +.++++++ ++|.|||+||.
T Consensus 4 LVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~------~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 4 LVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDR------ALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred EEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccH------HHHHHHHHhcCCCEEEECccc
Confidence 46788888888888888874444 6789998888877777 58999999998 77777775 58999999998
Q ss_pred CCcccC---HHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 84 VKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 84 v~f~e~---l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
....|+ +-.+++-||.||.+||++|++. ++++|||.|||.+||.... |.|+....|
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~~~PI~E~~~~~p------------------ 138 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPTTSPISETSPLAP------------------ 138 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCCCcccCCCCCCCC------------------
Confidence 755443 3469999999999999999995 8999999999999998763 555443322
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcc-cccccchhHHHHHHHhcCcee--E
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPM-WVKGMNGLTAMYVAVGLGIMR--T 233 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pG-Widn~~g~~~li~~~~~G~l~--~ 233 (1217)
-|+||.||++.|+++..+. .++.++++|.+++.|+..+..-| |..+..-...++..+..|... .
T Consensus 139 -----------~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ 207 (329)
T COG1087 139 -----------INPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLF 207 (329)
T ss_pred -----------CCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeE
Confidence 2789999999999999887 78999999999999997655444 444444334444445555443 3
Q ss_pred Eee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 234 VYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 234 i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
++| ||.++||+|||.|+|+|+++|+..-.. .+ ....||+|+|
T Consensus 208 ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~----~g---------------------------~~~~~NLG~G~ 256 (329)
T COG1087 208 IFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKE----GG---------------------------SNNIFNLGSGN 256 (329)
T ss_pred EeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHh----CC---------------------------ceeEEEccCCC
Confidence 444 788999999999999999998876443 11 1358999999
Q ss_pred ccCchHHHHHHHHhhchhh
Q psy13944 307 NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~~ 325 (1217)
.+|.+|+++.+.+..|.++
T Consensus 257 G~SV~evi~a~~~vtg~~i 275 (329)
T COG1087 257 GFSVLEVIEAAKKVTGRDI 275 (329)
T ss_pred ceeHHHHHHHHHHHhCCcC
Confidence 9999999999999999875
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-23 Score=231.46 Aligned_cols=246 Identities=17% Similarity=0.144 Sum_probs=185.7
Q ss_pred ccCCCCCCcccHHHHHHHHhc---ChhHHHhhhcCc----ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFA---DDAFDRLRKENA----NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAA 82 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~---~~vfd~Lr~~~p----~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA 82 (1217)
+||+.+.-|..+.++|.+... =.++|+-..... ...+...++.||++++ +++..+++++|+|||+||
T Consensus 2 VTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~------~~l~~a~~g~d~V~H~Aa 75 (280)
T PF01073_consen 2 VTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDP------ESLEEALEGVDVVFHTAA 75 (280)
T ss_pred EEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccH------HHHHHHhcCCceEEEeCc
Confidence 589999999999999999663 245553222111 1123334899999999 999999999999999999
Q ss_pred cCCcc--cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cc---cccccCCCCChHHHHHHhhcCC
Q psy13944 83 TVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KI---EEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 83 ~v~f~--e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I---~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
.+... .+.+.++++||.||++||++|++ .++++|||+||+.++++.. .+ +|..+
T Consensus 76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~-~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~----------------- 137 (280)
T PF01073_consen 76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARK-AGVKRLVYTSSISVVFDNYKGDPIINGDEDTP----------------- 137 (280)
T ss_pred cccccCcccHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcCcceeEeccCCCCcccCCcCCc-----------------
Confidence 88654 36778999999999999999998 4999999999999987621 11 22110
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhcC-------CCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKMD-------KLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~-------gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
....+.+.|+.||++||++++++.. .|.++++||+.||||+.... ...+...+.
T Consensus 138 ----------~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~---------~~~~~~~~~ 198 (280)
T PF01073_consen 138 ----------YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRL---------VPRLVKMVR 198 (280)
T ss_pred ----------ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccc---------cchhhHHHH
Confidence 0112446799999999999998753 48999999999999975321 123344455
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|......++++...|++||++||.|++.|+..-.. .+. .....|+.|+|+++
T Consensus 199 ~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~----~~~----------------------~~~~~G~~y~itd~~ 252 (280)
T PF01073_consen 199 SGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLE----PGK----------------------PERVAGQAYFITDGE 252 (280)
T ss_pred hcccceeecCCCceECcEeHHHHHHHHHHHHHHhcc----ccc----------------------cccCCCcEEEEECCC
Confidence 565566778888999999999999999998865333 000 01236999999999
Q ss_pred ccC-chHHHHHHHHhhchh
Q psy13944 307 NYD-TTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 ~~s-~~el~~~ia~~~g~~ 324 (1217)
+.. .||+...+.+.+|.+
T Consensus 253 p~~~~~~f~~~~~~~~G~~ 271 (280)
T PF01073_consen 253 PVPSFWDFMRPLWEALGYP 271 (280)
T ss_pred ccCcHHHHHHHHHHHCCCC
Confidence 888 999999999999976
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-23 Score=224.44 Aligned_cols=241 Identities=20% Similarity=0.145 Sum_probs=189.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---hHHHhhhc-C------cccCCCeEEEEccCCCCCCCCCHHHHHHhcC--Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---AFDRLRKE-N------ANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---vfd~Lr~~-~------p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VD 75 (1217)
.-+||..+.-|.+...-+.+--... +.|.|--. + -.-.++..++.|||.|. +.+..+++ .+|
T Consensus 3 iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~------~~v~~~~~~~~~D 76 (340)
T COG1088 3 ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDR------ELVDRLFKEYQPD 76 (340)
T ss_pred EEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCH------HHHHHHHHhcCCC
Confidence 3467888888877777666533321 12222110 0 11235889999999998 88888887 589
Q ss_pred EEEEcCccCCcccC---HHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc----ccccccCCCCChHHHHH
Q psy13944 76 IVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK----IEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 76 iViH~AA~v~f~e~---l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~----I~E~~y~~p~dp~~~~~ 148 (1217)
+|+|+||..+.+.+ +..++++||.||.+|||++++...-.+|+||||-.|||+... ..|+.+-.|
T Consensus 77 ~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~P-------- 148 (340)
T COG1088 77 AVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNP-------- 148 (340)
T ss_pred eEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCC--------
Confidence 99999999866543 558999999999999999999643359999999999998542 122211111
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHH
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV 226 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~ 226 (1217)
.++|..||+.+..+++.|. +|+|++|.|||+-|||++.| -.....++..+
T Consensus 149 ---------------------sSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfp-------EKlIP~~I~na 200 (340)
T COG1088 149 ---------------------SSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFP-------EKLIPLMIINA 200 (340)
T ss_pred ---------------------CCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCc-------hhhhHHHHHHH
Confidence 1569999999999999998 99999999999999999976 23345667788
Q ss_pred hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC
Q psy13944 227 GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG 306 (1217)
Q Consensus 227 ~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg 306 (1217)
..|....++|+|.++||++||+|-++|+-..+.+... |++||||++
T Consensus 201 l~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~----------------------------------GE~YNIgg~ 246 (340)
T COG1088 201 LLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI----------------------------------GETYNIGGG 246 (340)
T ss_pred HcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC----------------------------------CceEEeCCC
Confidence 8999999999999999999999999999887775444 899999999
Q ss_pred -ccCchHHHHHHHHhhchh
Q psy13944 307 -NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 -~~s~~el~~~ia~~~g~~ 324 (1217)
..+-.|+++.|.+.+|+.
T Consensus 247 ~E~~Nlevv~~i~~~l~~~ 265 (340)
T COG1088 247 NERTNLEVVKTICELLGKD 265 (340)
T ss_pred ccchHHHHHHHHHHHhCcc
Confidence 899999999999999975
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=235.92 Aligned_cols=246 Identities=13% Similarity=0.055 Sum_probs=181.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhh-----------hcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLR-----------KEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLREDV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr-----------~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V 74 (1217)
.-+||+.+.-|..+.++|.+.... ..+++.. ... .....++.++.||+.+. +++..+++++
T Consensus 18 vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~------~~l~~~~~~~ 91 (348)
T PRK15181 18 WLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKF------TDCQKACKNV 91 (348)
T ss_pred EEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCH------HHHHHHhhCC
Confidence 448999999999999999874211 1122211 000 11235688999999997 7888888999
Q ss_pred cEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHH
Q psy13944 75 NIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 75 DiViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~ 149 (1217)
|+|||+||.... ........++|+.||.+||++|++. ++++|||+||+.+||.... +.|+...
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~----------- 159 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHPDLPKIEERIG----------- 159 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCCCCCCCCCCCC-----------
Confidence 999999997543 2344568999999999999999985 8899999999999986321 1121100
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
...+.|+.||.++|+++..+. .+++++++||++||||++.|.... . .....++..+.
T Consensus 160 ------------------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~-~--~~i~~~~~~~~ 218 (348)
T PRK15181 160 ------------------RPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAY-S--AVIPRWILSLL 218 (348)
T ss_pred ------------------CCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCcc-c--cCHHHHHHHHH
Confidence 011569999999999998876 689999999999999986542111 0 12235555566
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|....+.+++++.+|||||||+|++++.++..... . ..++.|||+++
T Consensus 219 ~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~----~---------------------------~~~~~yni~~g~ 267 (348)
T PRK15181 219 KDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL----A---------------------------SKNKVYNVAVGD 267 (348)
T ss_pred cCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc----c---------------------------CCCCEEEecCCC
Confidence 666666788999999999999999999877653211 0 02678999999
Q ss_pred ccCchHHHHHHHHhhch
Q psy13944 307 NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~ 323 (1217)
++++.|+++.+.+.++.
T Consensus 268 ~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 268 RTSLNELYYLIRDGLNL 284 (348)
T ss_pred cEeHHHHHHHHHHHhCc
Confidence 99999999999988763
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=213.05 Aligned_cols=240 Identities=18% Similarity=0.157 Sum_probs=183.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH---HH------hhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHh--cCCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF---DR------LRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVL--REDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf---d~------Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L--~~~VD 75 (1217)
.-+||.++.-|.+...++.+--.+.-| |. +.... .....+-.++.+|+.+. .....+ .+++|
T Consensus 9 vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~------~~~~~~~~~~~id 82 (331)
T KOG0747|consen 9 VLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADA------DLVLYLFETEEID 82 (331)
T ss_pred EEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccch------HHHHhhhccCchh
Confidence 457888888888888777663332111 11 11111 12345678999999987 333333 35789
Q ss_pred EEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc---ccccccCCCCChHHHHH
Q psy13944 76 IVFHVAATVKF----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK---IEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 76 iViH~AA~v~f----~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~---I~E~~y~~p~dp~~~~~ 148 (1217)
.|+|+||.... .+++ +++..|+.+|..||+.++..+++++|||+||..|||+..+ ..|...+.|
T Consensus 83 ~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nP-------- 153 (331)
T KOG0747|consen 83 TVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNP-------- 153 (331)
T ss_pred hhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCC--------
Confidence 99999998643 3443 5888999999999999999889999999999999998753 123222221
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHH
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV 226 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~ 226 (1217)
.|+|+.||++||++++.|. .++|++++|.++||||.+-|. .....++...
T Consensus 154 ---------------------tnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-------klipkFi~l~ 205 (331)
T KOG0747|consen 154 ---------------------TNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-------KLIPKFIKLA 205 (331)
T ss_pred ---------------------CCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-------HHhHHHHHHH
Confidence 2789999999999999998 899999999999999988652 2334566655
Q ss_pred hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC
Q psy13944 227 GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG 306 (1217)
Q Consensus 227 ~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg 306 (1217)
..|..-++.|+|.+.+.++||+|+++|+.+++.+ +. .|++||||+.
T Consensus 206 ~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-g~---------------------------------~geIYNIgtd 251 (331)
T KOG0747|consen 206 MRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-GE---------------------------------LGEIYNIGTD 251 (331)
T ss_pred HhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-CC---------------------------------ccceeeccCc
Confidence 6676778899999999999999999999887776 32 2899999999
Q ss_pred -ccCchHHHHHHHHhhchh
Q psy13944 307 -NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 -~~s~~el~~~ia~~~g~~ 324 (1217)
+....|+++.|.+..++.
T Consensus 252 ~e~~~~~l~k~i~eli~~~ 270 (331)
T KOG0747|consen 252 DEMRVIDLAKDICELFEKR 270 (331)
T ss_pred chhhHHHHHHHHHHHHHHh
Confidence 999999999998887764
|
|
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.4e-22 Score=188.08 Aligned_cols=92 Identities=35% Similarity=0.708 Sum_probs=88.8
Q ss_pred HHHhhhHHHHHHHHHHhhCCchhHHHHHHHHHHHHhhccccccCeEEeechhHHHHHhhcCcccccccccccccCCHHHH
Q psy13944 1072 LYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTLNSKDRKMFGFSMKKVSWLFF 1151 (1217)
Q Consensus 1072 ~~~~lPa~l~~d~~~~l~g~kp~l~k~~~k~~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~Dr~~F~fD~~~i~W~~Y 1151 (1217)
++|.+||++ .|.++.+.|+||+++++++|+..++++++||+++||+|+|+|+++|++.|+++||++|+||+++|||++|
T Consensus 1 ~~~~lpa~~-~d~~~~l~g~~~~~~~~~~k~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~~idW~~Y 79 (92)
T cd09071 1 FLHLLPAYL-LDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDY 79 (92)
T ss_pred CcccchHHH-HHHHHHHhCCChHHHHHHHHHHHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCCCCCHHHH
Confidence 468999996 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhc
Q psy13944 1152 HLNLHRSLSKYAI 1164 (1217)
Q Consensus 1152 ~~~~~~g~~~y~~ 1164 (1217)
+.+++.|+|+|++
T Consensus 80 ~~~~~~G~r~yll 92 (92)
T cd09071 80 FENYIPGLRKYLL 92 (92)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999985
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-22 Score=188.57 Aligned_cols=92 Identities=35% Similarity=0.703 Sum_probs=89.6
Q ss_pred HHHHhhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhhcccCeeEeccccHHHHHHHcCccccccccCccccCCHHHH
Q psy13944 426 LYNLLPTLVFFVFLEKLSGKKAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTLNSKDRKMFGFSMKKVSWLFF 505 (1217)
Q Consensus 426 ~~~~~pa~~~d~~~~~~~g~k~~~~k~~~k~~~~~~~~~~F~~~~w~f~~~n~~~L~~~l~~~d~~~F~fd~~~~~W~~Y 505 (1217)
++|.+||+++| +++.+.|+||+++|+++|+.+++++++||+++||.|+++|+.+|++.|+++||++|+||++.|||++|
T Consensus 1 ~~~~lpa~~~d-~~~~l~g~~~~~~~~~~k~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~~idW~~Y 79 (92)
T cd09071 1 FLHLLPAYLLD-LLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDY 79 (92)
T ss_pred CcccchHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCCCCCHHHH
Confidence 36899999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccccc
Q psy13944 506 HLNLHRSLSKYAI 518 (1217)
Q Consensus 506 ~~~~~~GirvYlL 518 (1217)
++++++|++.|++
T Consensus 80 ~~~~~~G~r~yll 92 (92)
T cd09071 80 FENYIPGLRKYLL 92 (92)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999975
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-20 Score=216.00 Aligned_cols=240 Identities=20% Similarity=0.148 Sum_probs=178.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh--hHHHhhhcC------c-ccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD--AFDRLRKEN------A-NFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIV 77 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~--vfd~Lr~~~------p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiV 77 (1217)
-+||+.+.-|..+.++|.+..... ++++..+.. + ....++.++.+|++++ ++++.++++ +|+|
T Consensus 5 lVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~D~V 78 (355)
T PRK10217 5 LITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDR------AELARVFTEHQPDCV 78 (355)
T ss_pred EEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcCh------HHHHHHHhhcCCCEE
Confidence 368999999999999998753321 233221100 0 0123688899999998 788887774 8999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhc--------CCCCeEEEEcCcccccccc----cccccccCCCCC
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEM--------KNLDSFIYVSTAYSNCNIK----KIEEKFYEPLYT 142 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~--------~~lk~fV~vSTa~v~g~~~----~I~E~~y~~p~d 142 (1217)
||+||..... +..+..+++|+.||.+++++|++. +++++|||+||..+||... .++|+....
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~--- 155 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA--- 155 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCC---
Confidence 9999986543 245679999999999999999863 3568999999999998532 123321110
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
.-+.|+.||.++|+++..++ .+++++++||++||||.+.|. ....
T Consensus 156 --------------------------p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-------~~~~ 202 (355)
T PRK10217 156 --------------------------PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-------KLIP 202 (355)
T ss_pred --------------------------CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-------cHHH
Confidence 12579999999999999875 789999999999999976431 1223
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccce
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVN 300 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~ 300 (1217)
.++..+..|....+++++++.+||+||||+|.+++.++..... ++.
T Consensus 203 ~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~~----------------------------------~~~ 248 (355)
T PRK10217 203 LMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKV----------------------------------GET 248 (355)
T ss_pred HHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCCC----------------------------------CCe
Confidence 4455556665556678999999999999999999888754222 578
Q ss_pred eeccCC-ccCchHHHHHHHHhhchh
Q psy13944 301 YEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 301 YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
||++++ +++.+|+++.+++.+|..
T Consensus 249 yni~~~~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 249 YNIGGHNERKNLDVVETICELLEEL 273 (355)
T ss_pred EEeCCCCcccHHHHHHHHHHHhccc
Confidence 999999 899999999999988853
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-21 Score=221.43 Aligned_cols=218 Identities=23% Similarity=0.258 Sum_probs=166.5
Q ss_pred CCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcccCHH
Q psy13944 13 AKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQ 91 (1217)
Q Consensus 13 ~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e~l~ 91 (1217)
.|++..+.+.+||++.++. ..|+ ....++|+++.||+++++|||++.+++.|.++||.|||+||.+++..|+.
T Consensus 32 VRA~s~E~a~~RL~~~~~~~~~~~------e~~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs 105 (382)
T COG3320 32 VRAQSDEAALARLEKTFDLYRHWD------ELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYS 105 (382)
T ss_pred EecCCHHHHHHHHHHHhhhhhhhh------hhhcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcccCcHH
Confidence 4667777789999987772 3343 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCC
Q psy13944 92 TAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPN 171 (1217)
Q Consensus 92 ~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PN 171 (1217)
++...||.||..++++|.. .+.|.|+||||.+|......-..+. +.. .+++.. ...+..++
T Consensus 106 ~L~~~NVlGT~evlrLa~~-gk~Kp~~yVSsisv~~~~~~~~~~~-----~~~--------~~~~~~-----~~~~~~~~ 166 (382)
T COG3320 106 ELRGANVLGTAEVLRLAAT-GKPKPLHYVSSISVGETEYYSNFTV-----DFD--------EISPTR-----NVGQGLAG 166 (382)
T ss_pred HhcCcchHhHHHHHHHHhc-CCCceeEEEeeeeeccccccCCCcc-----ccc--------cccccc-----cccCccCC
Confidence 9999999999999999988 5789999999999876533111100 000 000111 11345678
Q ss_pred hHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh-cCceeEEeeCCCceeccccHHH
Q psy13944 172 TYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG-LGIMRTVYQNTSNIVDMVPGDL 249 (1217)
Q Consensus 172 tYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~-~G~l~~i~g~~~~~~D~VpVDd 249 (1217)
+|+.|||+||.++++.. .|+|++|+||+.|.|+.+ +|-.+.....+.++.++. .|..+ +.+...|++|||.
T Consensus 167 GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~lg~~P----~~~~~~~~~p~~~ 239 (382)
T COG3320 167 GYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQLGIAP----DSEYSLDMLPVDH 239 (382)
T ss_pred CcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc---cCccccchHHHHHHHHHHHhCCCC----CcccchhhCccce
Confidence 99999999999999998 899999999999999976 444444445556665544 34332 3467788999999
Q ss_pred HHHHHHHHHHhhh
Q psy13944 250 VVNILLAAAWDVA 262 (1217)
Q Consensus 250 VvnAii~aa~~~~ 262 (1217)
++.++.+.+.+..
T Consensus 240 v~~~v~~~~~~~~ 252 (382)
T COG3320 240 VARAVVAPSVQVA 252 (382)
T ss_pred eeEEeehhhhhHH
Confidence 8888777666554
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=214.31 Aligned_cols=269 Identities=13% Similarity=0.034 Sum_probs=181.6
Q ss_pred CcccCCCCCCcccHHHHHHHHh-cC-hhHHHhhhc----C----cccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFF-AD-DAFDRLRKE----N----ANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l-~~-~vfd~Lr~~----~----p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+.- .. .++++.... . +....+++++.||+.+. +++..+++++|+|
T Consensus 17 VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~------~~l~~~~~~~d~V 90 (386)
T PLN02427 17 ICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHD------SRLEGLIKMADLT 90 (386)
T ss_pred EEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCCh------HHHHHHhhcCCEE
Confidence 3589999999999999998752 21 223321110 0 01234799999999998 8888888999999
Q ss_pred EEcCccCC---cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhc
Q psy13944 78 FHVAATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 78 iH~AA~v~---f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
||+||... +.......+..|+.|+.+++++|++. + ++|||+||+++||.... +.|.....+ ++.. ..
T Consensus 91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~-~~~~-----~~ 162 (386)
T PLN02427 91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIGSFLPKDHPLRQ-DPAF-----YV 162 (386)
T ss_pred EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcCCCCCccccccc-cccc-----cc
Confidence 99999753 33344456788999999999999884 4 89999999999986431 233221100 0000 00
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccc---cccc-hhHHHHHHH
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWV---KGMN-GLTAMYVAV 226 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWi---dn~~-g~~~li~~~ 226 (1217)
.+++. ............+.|+.||.++|+++..++ .+++++|+||++||||++...+|-. .... ....++..+
T Consensus 163 ~~e~~-~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (386)
T PLN02427 163 LKEDE-SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 241 (386)
T ss_pred ccccc-cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHH
Confidence 00000 000000001123579999999999999876 6899999999999999865433210 0111 112333455
Q ss_pred hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC
Q psy13944 227 GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG 306 (1217)
Q Consensus 227 ~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg 306 (1217)
..|....+.+++++.+|||||||+|++++.++.+... ..++.||++++
T Consensus 242 ~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~--------------------------------~~g~~yni~~~ 289 (386)
T PLN02427 242 LRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPAR--------------------------------ANGHIFNVGNP 289 (386)
T ss_pred hcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCccc--------------------------------ccCceEEeCCC
Confidence 5666656778888999999999999999988765321 02568999985
Q ss_pred --ccCchHHHHHHHHhhch
Q psy13944 307 --NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 307 --~~s~~el~~~ia~~~g~ 323 (1217)
+++..|+++.+++.+|.
T Consensus 290 ~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 290 NNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred CCCccHHHHHHHHHHHhcc
Confidence 79999999999998874
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-20 Score=220.29 Aligned_cols=264 Identities=14% Similarity=0.058 Sum_probs=179.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcc------------------------cCCCeEEEEccCCCCCCCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENAN------------------------FTERIVVLTADLQSDGLGL 62 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~------------------------~~~kI~~V~GDl~d~~LGL 62 (1217)
.-+||+.+.-|..+.++|.+...+ .++|++.+..+. ...+++++.||++++
T Consensus 50 VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~---- 125 (442)
T PLN02572 50 VMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDF---- 125 (442)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCH----
Confidence 448999999999999999874322 233332211100 013688999999998
Q ss_pred CHHHHHHhcC--CccEEEEcCccCCcc----cC--HHHHHHHHHHHHHHHHHHhHhcCCCC-eEEEEcCcccccccc-cc
Q psy13944 63 DEKEKKVLRE--DVNIVFHVAATVKFD----EH--FQTAFEINCKGTEKLLKMAEEMKNLD-SFIYVSTAYSNCNIK-KI 132 (1217)
Q Consensus 63 s~edl~~L~~--~VDiViH~AA~v~f~----e~--l~~a~~vNV~GT~~LLelAk~~~~lk-~fV~vSTa~v~g~~~-~I 132 (1217)
+.+..+++ ++|+|||+||..... .+ ....+++|+.||.++|++|++. +++ +|||+||..+||... .+
T Consensus 126 --~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~V~~SS~~vYG~~~~~~ 202 (442)
T PLN02572 126 --EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHLVKLGTMGEYGTPNIDI 202 (442)
T ss_pred --HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccEEEEecceecCCCCCCC
Confidence 78887776 589999999874321 11 2345789999999999999985 564 899999999998632 23
Q ss_pred cccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCc
Q psy13944 133 EEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 133 ~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
+|...+. ++ ...++.. +. .....+.|+.||.++|.++..++ .+++++++||++||||++.+..
T Consensus 203 ~E~~i~~--~~--------~~~e~~~----~~-~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~ 267 (442)
T PLN02572 203 EEGYITI--TH--------NGRTDTL----PY-PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETM 267 (442)
T ss_pred ccccccc--cc--------ccccccc----cC-CCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccc
Confidence 3321000 00 0000000 00 00112579999999999998886 6999999999999999864310
Q ss_pred --ccc------cc-c-chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy13944 211 --MWV------KG-M-NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEA 280 (1217)
Q Consensus 211 --GWi------dn-~-~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~ 280 (1217)
-+. ++ + .....++..+..|....++|++++.+|||||||+|++++.++..... .+
T Consensus 268 ~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~----~g----------- 332 (442)
T PLN02572 268 MDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAK----PG----------- 332 (442)
T ss_pred cccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhh----cC-----------
Confidence 000 01 1 12334555666676656788999999999999999999988765322 00
Q ss_pred cccCCCCchhhhhhhhccceeeccCCccCchHHHHHHHHh---hchh
Q psy13944 281 KLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIKQN---IKEK 324 (1217)
Q Consensus 281 hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia~~---~g~~ 324 (1217)
....||++++.+++.|+++.+++. +|.+
T Consensus 333 ----------------~~~i~Nigs~~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 333 ----------------EFRVFNQFTEQFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred ----------------ceeEEEeCCCceeHHHHHHHHHHHHHhhCCC
Confidence 125799987789999999999998 6644
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-20 Score=219.11 Aligned_cols=239 Identities=12% Similarity=0.092 Sum_probs=173.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhh----cCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRK----ENAN--FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVA 81 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~----~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~A 81 (1217)
-+||+.+.-|..+.++|.+...+ ..+++... .... ...++.++.+|+.++ .+.++|+|||+|
T Consensus 124 LVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----------~~~~~D~ViHlA 192 (436)
T PLN02166 124 VVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----------ILLEVDQIYHLA 192 (436)
T ss_pred EEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----------cccCCCEEEECc
Confidence 37999999999999999874322 11221100 0000 123678899999775 135799999999
Q ss_pred ccCC---cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcc
Q psy13944 82 ATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHT 156 (1217)
Q Consensus 82 A~v~---f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~ 156 (1217)
|... +.......+++|+.||.+|+++|++. + .+|||+||.+|||+.. .++|..+..
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g-~r~V~~SS~~VYg~~~~~p~~E~~~~~----------------- 253 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-G-ARFLLTSTSEVYGDPLEHPQKETYWGN----------------- 253 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-C-CEEEEECcHHHhCCCCCCCCCcccccc-----------------
Confidence 9753 33456678999999999999999985 4 4899999999998643 133332110
Q ss_pred cccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE
Q psy13944 157 ELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 157 ~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i 234 (1217)
.++.. ..+.|+.||..+|++++.+. .+++++++||++|||+++.+.. -.....++..+..|....+
T Consensus 254 -~~p~~------p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~-----~~~i~~~i~~~l~~~~i~v 321 (436)
T PLN02166 254 -VNPIG------ERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDD-----GRVVSNFVAQTIRKQPMTV 321 (436)
T ss_pred -CCCCC------CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCc-----cchHHHHHHHHhcCCCcEE
Confidence 00000 11569999999999999886 6899999999999999753211 1112356666677766677
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHH
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNH 313 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el 313 (1217)
++++++.+|||||+|+|++++.++... . +..|||+++ .++..|+
T Consensus 322 ~g~g~~~rdfi~V~Dva~ai~~~~~~~-~----------------------------------~giyNIgs~~~~Si~el 366 (436)
T PLN02166 322 YGDGKQTRSFQYVSDLVDGLVALMEGE-H----------------------------------VGPFNLGNPGEFTMLEL 366 (436)
T ss_pred eCCCCeEEeeEEHHHHHHHHHHHHhcC-C----------------------------------CceEEeCCCCcEeHHHH
Confidence 889999999999999999998876421 1 347999998 8999999
Q ss_pred HHHHHHhhchh
Q psy13944 314 VNYIKQNIKEK 324 (1217)
Q Consensus 314 ~~~ia~~~g~~ 324 (1217)
++.+++.+|.+
T Consensus 367 a~~I~~~~g~~ 377 (436)
T PLN02166 367 AEVVKETIDSS 377 (436)
T ss_pred HHHHHHHhCCC
Confidence 99999998754
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=209.16 Aligned_cols=254 Identities=11% Similarity=0.060 Sum_probs=178.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh--HHHhhhcCcc--cCCCeEEEEccCC-CCCCCCCHHHHHHhcCCccEEEEcCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA--FDRLRKENAN--FTERIVVLTADLQ-SDGLGLDEKEKKVLREDVNIVFHVAAT 83 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v--fd~Lr~~~p~--~~~kI~~V~GDl~-d~~LGLs~edl~~L~~~VDiViH~AA~ 83 (1217)
-+||+.+.-|..+.++|.+--...+ .++-....+. ...+++++.+|++ +. +.+..+++++|+|||+||.
T Consensus 5 lVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~~~~~~~d~ViH~aa~ 78 (347)
T PRK11908 5 LILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINK------EWIEYHVKKCDVILPLVAI 78 (347)
T ss_pred EEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCH------HHHHHHHcCCCEEEECccc
Confidence 3789999999999999876321111 2211111111 1246899999998 44 6677788899999999996
Q ss_pred CC---cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 84 VK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 84 v~---f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
.. ....+..++++|+.||.+|+++|++. + ++|||+||+.+||.... +.|+..+.
T Consensus 79 ~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~~~~~ee~~~~------------------- 137 (347)
T PRK11908 79 ATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPDEEFDPEASPL------------------- 137 (347)
T ss_pred CChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCCcCcCcccccc-------------------
Confidence 43 23455678899999999999999985 4 79999999999986431 22211000
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccc-cchhHHHHHHHhcCceeEEe
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKG-MNGLTAMYVAVGLGIMRTVY 235 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn-~~g~~~li~~~~~G~l~~i~ 235 (1217)
. ..| .....+.|+.||.++|+++..++ .+++++++||+.||||+..+...-... ......++..+..|....+.
T Consensus 138 ~-~~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 214 (347)
T PRK11908 138 V-YGP--INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLV 214 (347)
T ss_pred c-cCc--CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEe
Confidence 0 000 01112579999999999999876 799999999999999986542111011 11223555566667655677
Q ss_pred eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC--ccCchHH
Q psy13944 236 QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG--NYDTTNH 313 (1217)
Q Consensus 236 g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg--~~s~~el 313 (1217)
+++++.+|||||+|+|++++.++.+... . ..++.||++++ .+++.|+
T Consensus 215 ~~g~~~r~~i~v~D~a~a~~~~~~~~~~----~---------------------------~~g~~yni~~~~~~~s~~e~ 263 (347)
T PRK11908 215 DGGSQKRAFTDIDDGIDALMKIIENKDG----V---------------------------ASGKIYNIGNPKNNHSVREL 263 (347)
T ss_pred cCCceeeccccHHHHHHHHHHHHhCccc----c---------------------------CCCCeEEeCCCCCCcCHHHH
Confidence 7889999999999999999988765321 0 02678999985 6899999
Q ss_pred HHHHHHhhch
Q psy13944 314 VNYIKQNIKE 323 (1217)
Q Consensus 314 ~~~ia~~~g~ 323 (1217)
++.+++.+|.
T Consensus 264 ~~~i~~~~~~ 273 (347)
T PRK11908 264 ANKMLELAAE 273 (347)
T ss_pred HHHHHHHhcC
Confidence 9999998885
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=214.99 Aligned_cols=240 Identities=13% Similarity=0.098 Sum_probs=172.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHh---hhcC-c--ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRL---RKEN-A--NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~L---r~~~-p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~ 80 (1217)
.-+||+.+.-|..+.++|.+.-.+ .+.++. +.+. . ....++.++.+|+.++ ++.++|+|||+
T Consensus 122 ILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----------~l~~~D~ViHl 190 (442)
T PLN02206 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----------ILLEVDQIYHL 190 (442)
T ss_pred EEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----------hhcCCCEEEEe
Confidence 338999999999999999874322 112211 0110 0 1124688899998775 23579999999
Q ss_pred CccCC---cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCc
Q psy13944 81 AATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 81 AA~v~---f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
||... ........+++|+.||.+|+++|++. +. +|||+||+.+||+... ..|+.+..
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~~---------------- 252 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHPQVETYWGN---------------- 252 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCCCCCCcccccc----------------
Confidence 99753 23456678999999999999999985 44 8999999999986431 23322110
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeE
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRT 233 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~ 233 (1217)
.++. ...+.|+.||.++|+++..+. .+++++++||++|||+...+..+ .....++..+..+....
T Consensus 253 --~~P~------~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~-----~~v~~~i~~~l~~~~i~ 319 (442)
T PLN02206 253 --VNPI------GVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDG-----RVVSNFVAQALRKEPLT 319 (442)
T ss_pred --CCCC------CccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccc-----chHHHHHHHHHcCCCcE
Confidence 0000 012579999999999999876 68999999999999997532111 11234555666665566
Q ss_pred EeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchH
Q psy13944 234 VYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTN 312 (1217)
Q Consensus 234 i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~e 312 (1217)
+++++++.+||+||+|+|++++.++... . +..|||+++ +++..|
T Consensus 320 i~g~G~~~rdfi~V~Dva~ai~~a~e~~-~----------------------------------~g~yNIgs~~~~sl~E 364 (442)
T PLN02206 320 VYGDGKQTRSFQFVSDLVEGLMRLMEGE-H----------------------------------VGPFNLGNPGEFTMLE 364 (442)
T ss_pred EeCCCCEEEeEEeHHHHHHHHHHHHhcC-C----------------------------------CceEEEcCCCceeHHH
Confidence 7889999999999999999999877531 1 347999988 899999
Q ss_pred HHHHHHHhhchh
Q psy13944 313 HVNYIKQNIKEK 324 (1217)
Q Consensus 313 l~~~ia~~~g~~ 324 (1217)
+++.+++.+|.+
T Consensus 365 lae~i~~~~g~~ 376 (442)
T PLN02206 365 LAKVVQETIDPN 376 (442)
T ss_pred HHHHHHHHhCCC
Confidence 999999988743
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-19 Score=206.50 Aligned_cols=251 Identities=19% Similarity=0.126 Sum_probs=175.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh--HHHhh------hcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA--FDRLR------KENA-NFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIV 77 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v--fd~Lr------~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiV 77 (1217)
-+||+.+.-|..+.++|.+.....+ .++.. .... ....+++++.+|+++. +++..+++ ++|+|
T Consensus 4 lITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v 77 (352)
T PRK10084 4 LVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDR------AELDRIFAQHQPDAV 77 (352)
T ss_pred EEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCH------HHHHHHHHhcCCCEE
Confidence 3689999999999999987533212 12110 0000 0124578899999998 78877775 48999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhc--------CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEM--------KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~--------~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
||+||.+... .....++++|+.||.+++++|++. +++++|||+||.++||.....++ ..+....|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~-~~~~~~~~--- 153 (352)
T PRK10084 78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE-VENSEELP--- 153 (352)
T ss_pred EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc-ccccccCC---
Confidence 9999986432 235678999999999999999863 24679999999999986321110 00000000
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
.++++. + ...-+.|+.||+++|+++..++ .++|++++||+.||||...+. .....++.
T Consensus 154 -----~~~E~~-----~---~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-------~~~~~~~~ 213 (352)
T PRK10084 154 -----LFTETT-----A---YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-------KLIPLVIL 213 (352)
T ss_pred -----CccccC-----C---CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-------chHHHHHH
Confidence 001110 0 0112679999999999998875 689999999999999975321 11233445
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN 304 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~ 304 (1217)
.+..|....+++++++.+|+|||||+|++++.++.... .++.||++
T Consensus 214 ~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~----------------------------------~~~~yni~ 259 (352)
T PRK10084 214 NALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGK----------------------------------AGETYNIG 259 (352)
T ss_pred HHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC----------------------------------CCceEEeC
Confidence 55556555677889999999999999999987775321 15789999
Q ss_pred CC-ccCchHHHHHHHHhhch
Q psy13944 305 HG-NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 305 sg-~~s~~el~~~ia~~~g~ 323 (1217)
++ +.+..++++.+++.+|.
T Consensus 260 ~~~~~s~~~~~~~i~~~~~~ 279 (352)
T PRK10084 260 GHNEKKNLDVVLTICDLLDE 279 (352)
T ss_pred CCCcCcHHHHHHHHHHHhcc
Confidence 98 88999999999998875
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-19 Score=203.74 Aligned_cols=240 Identities=18% Similarity=0.147 Sum_probs=169.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhh----hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLR----KENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr----~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiVi 78 (1217)
.-+||+.+.-|..+.++|.+..... . .+... +.......+++++.+|++++ +++..+++++|+||
T Consensus 13 vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~Vi 86 (342)
T PLN02214 13 VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY------EALKAAIDGCDGVF 86 (342)
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCCh------HHHHHHHhcCCEEE
Confidence 4589999999999999998642210 0 01100 01111124688999999998 88888889999999
Q ss_pred EcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCc-ccccccc-----cccccccCCCCChHHHHHHhhc
Q psy13944 79 HVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA-YSNCNIK-----KIEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 79 H~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa-~v~g~~~-----~I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
|+||... ......+++|+.||.+++++|++. ++++|||+||+ .+||... .++|+.++..
T Consensus 87 h~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~------------ 151 (342)
T PLN02214 87 HTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDL------------ 151 (342)
T ss_pred EecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCCCCcccCcccCCCh------------
Confidence 9999753 456778999999999999999984 78999999996 5776422 1333321100
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCc
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGI 230 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~ 230 (1217)
+. .....+.|+.||.++|++++.+. .+++++++||++||||...+. . ......+..+..|.
T Consensus 152 ---~~--------~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~--~----~~~~~~~~~~~~g~ 214 (342)
T PLN02214 152 ---DF--------CKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPT--I----NASLYHVLKYLTGS 214 (342)
T ss_pred ---hh--------ccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC--C----CchHHHHHHHHcCC
Confidence 00 00112579999999999999876 699999999999999975432 1 11111222334454
Q ss_pred eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCc
Q psy13944 231 MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDT 310 (1217)
Q Consensus 231 l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~ 310 (1217)
... . ++..+|||||+|||++++.++.+... ++.||+++++++.
T Consensus 215 ~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~~----------------------------------~g~yn~~~~~~~~ 257 (342)
T PLN02214 215 AKT-Y--ANLTQAYVDVRDVALAHVLVYEAPSA----------------------------------SGRYLLAESARHR 257 (342)
T ss_pred ccc-C--CCCCcCeeEHHHHHHHHHHHHhCccc----------------------------------CCcEEEecCCCCH
Confidence 332 2 35678999999999999998875433 3579998878899
Q ss_pred hHHHHHHHHhhc
Q psy13944 311 TNHVNYIKQNIK 322 (1217)
Q Consensus 311 ~el~~~ia~~~g 322 (1217)
.|+++.+++.++
T Consensus 258 ~el~~~i~~~~~ 269 (342)
T PLN02214 258 GEVVEILAKLFP 269 (342)
T ss_pred HHHHHHHHHHCC
Confidence 999999998875
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.3e-19 Score=221.60 Aligned_cols=256 Identities=11% Similarity=0.045 Sum_probs=180.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--hhHHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHH-HHHhcCCccEEEEcCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--DAFDRLRKENAN--FTERIVVLTADLQSDGLGLDEKE-KKVLREDVNIVFHVAA 82 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--~vfd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~ed-l~~L~~~VDiViH~AA 82 (1217)
.-+||+.+.-|..+.++|.+-... ..+++.....+. ..++++++.||++++ .+ ++.+++++|+|||+||
T Consensus 318 VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~------~~~l~~~l~~~D~ViHlAa 391 (660)
T PRK08125 318 VLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIH------SEWIEYHIKKCDVVLPLVA 391 (660)
T ss_pred EEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCc------HHHHHHHhcCCCEEEECcc
Confidence 448999999999999999874222 223322111111 124689999999986 43 4667789999999999
Q ss_pred cCC---cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCccc
Q psy13944 83 TVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTE 157 (1217)
Q Consensus 83 ~v~---f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~ 157 (1217)
... +.......+++|+.||.+++++|++. + ++|||+||+++||... .++|+....+.
T Consensus 392 ~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~---------------- 453 (660)
T PRK08125 392 IATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIV---------------- 453 (660)
T ss_pred ccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcCCCCCCCcCcccccccc----------------
Confidence 754 33445578899999999999999985 4 7999999999998632 13443211000
Q ss_pred ccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccc-cchhHHHHHHHhcCceeEE
Q psy13944 158 LTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKG-MNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 158 ~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn-~~g~~~li~~~~~G~l~~i 234 (1217)
.| .....+.|+.||+++|+++..++ .+++++++||++||||++.+....... ......++..+..|....+
T Consensus 454 ----~p--~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~ 527 (660)
T PRK08125 454 ----GP--INKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL 527 (660)
T ss_pred ----CC--CCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEE
Confidence 00 00011469999999999999876 689999999999999976432111000 1112345555666666667
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC--ccCchH
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG--NYDTTN 312 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg--~~s~~e 312 (1217)
.+++++.+|||||+|+|++++.++.+... . ..++.||++++ .++..|
T Consensus 528 ~g~g~~~rd~i~v~Dva~a~~~~l~~~~~----~---------------------------~~g~iyni~~~~~~~s~~e 576 (660)
T PRK08125 528 VDGGKQKRCFTDIRDGIEALFRIIENKDN----R---------------------------CDGQIINIGNPDNEASIRE 576 (660)
T ss_pred eCCCceeeceeeHHHHHHHHHHHHhcccc----c---------------------------cCCeEEEcCCCCCceeHHH
Confidence 78899999999999999999988764321 0 12678999987 589999
Q ss_pred HHHHHHHhhchh
Q psy13944 313 HVNYIKQNIKEK 324 (1217)
Q Consensus 313 l~~~ia~~~g~~ 324 (1217)
+++.+.+..|.+
T Consensus 577 l~~~i~~~~g~~ 588 (660)
T PRK08125 577 LAEMLLASFEKH 588 (660)
T ss_pred HHHHHHHHhccC
Confidence 999999998853
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=199.78 Aligned_cols=218 Identities=25% Similarity=0.298 Sum_probs=157.8
Q ss_pred CCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccc
Q psy13944 46 ERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 125 (1217)
Q Consensus 46 ~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v 125 (1217)
.+++++.||++++.|||+.+++..+.+++|+|||+||.+++..++....++|+.|+.+++++|.+. +.++|||+||.++
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v 139 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISV 139 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccc
Confidence 689999999999999999999999989999999999999888888889999999999999999984 6788999999999
Q ss_pred cccccc--ccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceec
Q psy13944 126 NCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVM 202 (1217)
Q Consensus 126 ~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~ 202 (1217)
++.... +.|. +.... ......++|+.||+.+|+++.++. .+++++|+||+.|+
T Consensus 140 ~~~~~~~~~~~~-------------------~~~~~-----~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~ 195 (367)
T TIGR01746 140 LAAIDLSTVTED-------------------DAIVT-----PPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRIL 195 (367)
T ss_pred cCCcCCCCcccc-------------------ccccc-----cccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCcee
Confidence 875321 1110 00000 011234689999999999998876 69999999999999
Q ss_pred cCCCCCCcccccccchhHHHHHHHh-cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhccccccccccccccccc
Q psy13944 203 PVVEEPCPMWVKGMNGLTAMYVAVG-LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAK 281 (1217)
Q Consensus 203 G~~~eP~pGWidn~~g~~~li~~~~-~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~h 281 (1217)
|+... |..........++..+. .|. .+.......+++||||++++++.++..... . ..+++||
T Consensus 196 G~~~~---g~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~vddva~ai~~~~~~~~~----~------~~~~~~~ 259 (367)
T TIGR01746 196 GNSYT---GAINSSDILWRMVKGCLALGA---YPDSPELTEDLTPVDYVARAIVALSSQPAA----S------AGGPVFH 259 (367)
T ss_pred ecCCC---CCCCchhHHHHHHHHHHHhCC---CCCCCccccCcccHHHHHHHHHHHHhCCCc----c------cCCceEE
Confidence 98432 22111112223333322 222 222222467899999999999988764332 0 1256899
Q ss_pred ccCCCCchhhhhhhhccc-eeecc
Q psy13944 282 LIDPNNNVEEESIKKLDV-NYEIN 304 (1217)
Q Consensus 282 l~np~~~~~~~~~~~~g~-~YnI~ 304 (1217)
+.+|.+.+|.+.+....+ ++.+.
T Consensus 260 v~~~~~~s~~e~~~~i~~~g~~~~ 283 (367)
T TIGR01746 260 VVNPEPVSLDEFLEWLERAGYNLK 283 (367)
T ss_pred ecCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999998888776333 44443
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=203.20 Aligned_cols=249 Identities=15% Similarity=0.060 Sum_probs=174.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH--HHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF--DRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf--d~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
.-.||+.+.-|..+.++|.+.. ..++ ++..... +.....+.++.+|+++. +.+..+++++|+|||+||.+
T Consensus 24 IlVtGgtGfIG~~l~~~L~~~G-~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~D~Vih~Aa~~ 96 (370)
T PLN02695 24 ICITGAGGFIASHIARRLKAEG-HYIIASDWKKNEHMSEDMFCHEFHLVDLRVM------ENCLKVTKGVDHVFNLAADM 96 (370)
T ss_pred EEEECCccHHHHHHHHHHHhCC-CEEEEEEeccccccccccccceEEECCCCCH------HHHHHHHhCCCEEEEccccc
Confidence 3489999999999999998742 2222 2211100 11111357889999987 77777778999999999975
Q ss_pred C---cc-cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 85 K---FD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 85 ~---f~-e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
. +. .........|+.|+.+|+++|++. ++++|||+||..+|+......+.. +. +++...+
T Consensus 97 ~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~~~~~---~~------------~E~~~~p 160 (370)
T PLN02695 97 GGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQLETNV---SL------------KESDAWP 160 (370)
T ss_pred CCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCccccCcCC---Cc------------CcccCCC
Confidence 3 21 233456788999999999999984 789999999999998643211110 00 0100000
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccc-cchhHHHHHHHhc-CceeEEee
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKG-MNGLTAMYVAVGL-GIMRTVYQ 236 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn-~~g~~~li~~~~~-G~l~~i~g 236 (1217)
. ..-+.|+.+|..+|+++..+. .+++++++||++||||... |... ...+..++..+.. +....+++
T Consensus 161 ~------~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~g 230 (370)
T PLN02695 161 A------EPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGT----WKGGREKAPAAFCRKALTSTDEFEMWG 230 (370)
T ss_pred C------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCC----ccccccccHHHHHHHHHcCCCCeEEeC
Confidence 0 112579999999999998876 6999999999999998643 2111 1123455555544 34456778
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVN 315 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~ 315 (1217)
++++.+|||||+|+|++++.++... . ++.||++++ +++..|+++
T Consensus 231 ~g~~~r~~i~v~D~a~ai~~~~~~~-~----------------------------------~~~~nv~~~~~~s~~el~~ 275 (370)
T PLN02695 231 DGKQTRSFTFIDECVEGVLRLTKSD-F----------------------------------REPVNIGSDEMVSMNEMAE 275 (370)
T ss_pred CCCeEEeEEeHHHHHHHHHHHHhcc-C----------------------------------CCceEecCCCceeHHHHHH
Confidence 9999999999999999998765431 1 357999998 899999999
Q ss_pred HHHHhhchh
Q psy13944 316 YIKQNIKEK 324 (1217)
Q Consensus 316 ~ia~~~g~~ 324 (1217)
.+.+..|.+
T Consensus 276 ~i~~~~g~~ 284 (370)
T PLN02695 276 IALSFENKK 284 (370)
T ss_pred HHHHHhCCC
Confidence 998887754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.1e-19 Score=201.49 Aligned_cols=241 Identities=17% Similarity=0.170 Sum_probs=170.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHH---------HhhhcCc--ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFD---------RLRKENA--NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd---------~Lr~~~p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDi 76 (1217)
.-+||+.+.-|..+.++|.+... .+.- .+.+..+ ....+++++.+|++++ +.+..+++++|+
T Consensus 8 vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~d~ 80 (322)
T PLN02986 8 VCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEE------SSFEQAIEGCDA 80 (322)
T ss_pred EEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCc------chHHHHHhCCCE
Confidence 45899999999999999987421 1111 1111000 1134789999999998 788888899999
Q ss_pred EEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccc--cccc-----cccccccCCCCChHHHH
Q psy13944 77 VFHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN--CNIK-----KIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 77 ViH~AA~v~f~--e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~--g~~~-----~I~E~~y~~p~dp~~~~ 147 (1217)
|||+||.+... ++....+++|+.||.+++++|++.+++++|||+||+.++ +... .++|+.+..|
T Consensus 81 vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p------- 153 (322)
T PLN02986 81 VFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDP------- 153 (322)
T ss_pred EEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCCh-------
Confidence 99999986442 344467899999999999999886578999999998654 3211 1222221110
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
.......+.|+.||.++|++++++. .+++++++||++||||...|..+ + ...++..
T Consensus 154 ----------------~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~----~--~~~~~~~ 211 (322)
T PLN02986 154 ----------------SLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLN----F--SVELIVD 211 (322)
T ss_pred ----------------HHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCC----c--cHHHHHH
Confidence 0011123679999999999999886 68999999999999997655211 1 1244555
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccC
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINH 305 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~s 305 (1217)
+..|.. +. +.+.+++|||+|+|++++.++..+.. ++.||+++
T Consensus 212 ~~~g~~--~~--~~~~~~~v~v~Dva~a~~~al~~~~~----------------------------------~~~yni~~ 253 (322)
T PLN02986 212 FINGKN--LF--NNRFYRFVDVRDVALAHIKALETPSA----------------------------------NGRYIIDG 253 (322)
T ss_pred HHcCCC--CC--CCcCcceeEHHHHHHHHHHHhcCccc----------------------------------CCcEEEec
Confidence 555542 12 35678999999999999988875433 34799965
Q ss_pred CccCchHHHHHHHHhhc
Q psy13944 306 GNYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 306 g~~s~~el~~~ia~~~g 322 (1217)
.+++..|+++.+++.++
T Consensus 254 ~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 254 PIMSVNDIIDILRELFP 270 (322)
T ss_pred CCCCHHHHHHHHHHHCC
Confidence 58999999999998875
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-18 Score=196.22 Aligned_cols=241 Identities=22% Similarity=0.245 Sum_probs=180.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc-cEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDV-NIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V-DiViH~AA~v~f 86 (1217)
-+||+.+.-|..+.+||.+...+ ..+++...........+.++.+|+++. +....+.+.+ |+|||+||....
T Consensus 4 LVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~~d~vih~aa~~~~ 77 (314)
T COG0451 4 LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDR------DLVDELAKGVPDAVIHLAAQSSV 77 (314)
T ss_pred EEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccccccceeeecccch------HHHHHHHhcCCCEEEEccccCch
Confidence 36888999999999999985222 334432222221124678999999997 6667777778 999999999765
Q ss_pred ccC----HHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 87 DEH----FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 87 ~e~----l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
... +..+..+|+.||.+++++|++ .++++|||.||.++++... .++|+. .|
T Consensus 78 ~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~~~~~~~~~~E~~--~~------------------- 135 (314)
T COG0451 78 PDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVYGDPPPLPIDEDL--GP------------------- 135 (314)
T ss_pred hhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceECCCCCCCCccccc--CC-------------------
Confidence 433 346899999999999999998 6899999988888777531 233321 11
Q ss_pred ccccccCCCCC-ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCce-eEEe
Q psy13944 160 VLNDILIKPMP-NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIM-RTVY 235 (1217)
Q Consensus 160 ~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l-~~i~ 235 (1217)
..| +.|+.||+++|+++..+. .+++++|+||+.|||++..+. + .+ .....++..+..+.. ..+.
T Consensus 136 --------~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~ 203 (314)
T COG0451 136 --------PRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPD--L-SS-GVVSAFIRQLLKGEPIIVIG 203 (314)
T ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCC--C-Cc-CcHHHHHHHHHhCCCcceEe
Confidence 111 269999999999999988 689999999999999987553 1 11 122334545566664 5667
Q ss_pred eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC--ccCchHH
Q psy13944 236 QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG--NYDTTNH 313 (1217)
Q Consensus 236 g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg--~~s~~el 313 (1217)
+++...++++||||+|.+++.++..... + .||++++ .++..|+
T Consensus 204 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~----------------------------------~-~~ni~~~~~~~~~~e~ 248 (314)
T COG0451 204 GDGSQTRDFVYVDDVADALLLALENPDG----------------------------------G-VFNIGSGTAEITVREL 248 (314)
T ss_pred CCCceeEeeEeHHHHHHHHHHHHhCCCC----------------------------------c-EEEeCCCCCcEEHHHH
Confidence 7888889999999999999998876554 3 8999998 6899999
Q ss_pred HHHHHHhhchh
Q psy13944 314 VNYIKQNIKEK 324 (1217)
Q Consensus 314 ~~~ia~~~g~~ 324 (1217)
++.+++.+|..
T Consensus 249 ~~~~~~~~~~~ 259 (314)
T COG0451 249 AEAVAEAVGSK 259 (314)
T ss_pred HHHHHHHhCCC
Confidence 99999998876
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=199.24 Aligned_cols=241 Identities=14% Similarity=0.103 Sum_probs=167.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH----------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD----------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd----------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDi 76 (1217)
.-+||+.+.-|..+.++|.+.... .+.. .+.. .+....+++++.||++++ +.+..+++++|+
T Consensus 7 ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~d~ 79 (322)
T PLN02662 7 VCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLA-LDGAKERLHLFKANLLEE------GSFDSVVDGCEG 79 (322)
T ss_pred EEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHh-ccCCCCceEEEeccccCc------chHHHHHcCCCE
Confidence 558999999999999999874221 0111 0100 011134789999999998 778888899999
Q ss_pred EEEcCccCCc--ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccc--ccccc-----cccccccCCCCChHHHH
Q psy13944 77 VFHVAATVKF--DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS--NCNIK-----KIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 77 ViH~AA~v~f--~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v--~g~~~-----~I~E~~y~~p~dp~~~~ 147 (1217)
|||+||.... ..+....+++|+.||.+++++|++..++++|||+||+++ |+... .++|+....
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~-------- 151 (322)
T PLN02662 80 VFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSD-------- 151 (322)
T ss_pred EEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCC--------
Confidence 9999997643 233347889999999999999988557899999999753 54321 123321111
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
|......++.|+.||.++|++++.+. .+++++++||+.||||...|..+ .....+..
T Consensus 152 ---------------p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~------~~~~~~~~ 210 (322)
T PLN02662 152 ---------------PAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLN------TSAEAILN 210 (322)
T ss_pred ---------------hhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCC------chHHHHHH
Confidence 10011123579999999999998876 68999999999999997654211 11233444
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccC
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINH 305 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~s 305 (1217)
+..|.. ..+++.+|||||||+|++++.++..+.. +..||+++
T Consensus 211 ~~~~~~----~~~~~~~~~i~v~Dva~a~~~~~~~~~~----------------------------------~~~~~~~g 252 (322)
T PLN02662 211 LINGAQ----TFPNASYRWVDVRDVANAHIQAFEIPSA----------------------------------SGRYCLVE 252 (322)
T ss_pred HhcCCc----cCCCCCcCeEEHHHHHHHHHHHhcCcCc----------------------------------CCcEEEeC
Confidence 444432 1235679999999999999988765332 23578874
Q ss_pred CccCchHHHHHHHHhhc
Q psy13944 306 GNYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 306 g~~s~~el~~~ia~~~g 322 (1217)
.+++..|+++.+.+.++
T Consensus 253 ~~~s~~e~~~~i~~~~~ 269 (322)
T PLN02662 253 RVVHYSEVVKILHELYP 269 (322)
T ss_pred CCCCHHHHHHHHHHHCC
Confidence 58999999999998765
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=199.90 Aligned_cols=241 Identities=13% Similarity=0.043 Sum_probs=172.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHH---------hhhc---C-cccCCCeEEEEccCCCCCCCCCHHHHHHhcCC-
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDR---------LRKE---N-ANFTERIVVLTADLQSDGLGLDEKEKKVLRED- 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~---------Lr~~---~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~- 73 (1217)
-+||+.+.-|..+.++|.+...+ .++++ +... . .....+++++.||+++. +.+..++++
T Consensus 4 lVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~l~~~~~~~ 77 (343)
T TIGR01472 4 LITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDS------SNLRRIIDEI 77 (343)
T ss_pred EEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCH------HHHHHHHHhC
Confidence 47899999999999999874322 11221 1100 0 00123588999999998 788887774
Q ss_pred -ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCC---CeEEEEcCccccccccc--ccccccCCCCChH
Q psy13944 74 -VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNL---DSFIYVSTAYSNCNIKK--IEEKFYEPLYTHI 144 (1217)
Q Consensus 74 -VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~l---k~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~ 144 (1217)
+|+|||+||..... +.....+++|+.||.+|+++|++. ++ ++|||+||+.+||.... ++|+....
T Consensus 78 ~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~----- 151 (343)
T TIGR01472 78 KPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSELYGKVQEIPQNETTPFY----- 151 (343)
T ss_pred CCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHHhhCCCCCCCCCCCCCCC-----
Confidence 69999999985432 234567788999999999999885 43 48999999999986431 22321110
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
..+.|+.||..+|.+++.++ .++++++.|+.++|||.... +.. ......+
T Consensus 152 ------------------------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~--~~~~~~~ 203 (343)
T TIGR01472 152 ------------------------PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGE--NFV--TRKITRA 203 (343)
T ss_pred ------------------------CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCc--ccc--chHHHHH
Confidence 12579999999999998886 68999999999999986321 111 0112234
Q ss_pred HHHHhcCc-eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcccee
Q psy13944 223 YVAVGLGI-MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNY 301 (1217)
Q Consensus 223 i~~~~~G~-l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Y 301 (1217)
+..+..|. ...+.|++++.+||+||||+|++++.++.+. . +..|
T Consensus 204 ~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~-~----------------------------------~~~y 248 (343)
T TIGR01472 204 AAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQD-K----------------------------------PDDY 248 (343)
T ss_pred HHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcC-C----------------------------------CccE
Confidence 44455564 3345688999999999999999998887532 1 2469
Q ss_pred eccCC-ccCchHHHHHHHHhhchh
Q psy13944 302 EINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 302 nI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
||+++ ++++.|+++.+++.+|.+
T Consensus 249 ni~~g~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 249 VIATGETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred EecCCCceeHHHHHHHHHHHcCCC
Confidence 99999 999999999999998864
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-18 Score=194.75 Aligned_cols=233 Identities=12% Similarity=0.064 Sum_probs=164.9
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccCCc-
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATVKF- 86 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v~f- 86 (1217)
+||+.+.-|..+.++|.+.-...+.. . ....+|+++. ++++.+++ ++|+|||+||....
T Consensus 2 ItGa~GfiG~~l~~~L~~~g~~v~~~--~----------~~~~~Dl~~~------~~l~~~~~~~~~d~Vih~A~~~~~~ 63 (306)
T PLN02725 2 VAGHRGLVGSAIVRKLEALGFTNLVL--R----------THKELDLTRQ------ADVEAFFAKEKPTYVILAAAKVGGI 63 (306)
T ss_pred cccCCCcccHHHHHHHHhCCCcEEEe--e----------ccccCCCCCH------HHHHHHHhccCCCEEEEeeeeeccc
Confidence 58999999999999997743221111 0 1136899887 78877765 57999999997542
Q ss_pred ---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 87 ---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 87 ---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
......+++.|+.||.+|+++|++. ++++|||+||+++||... .++|+....
T Consensus 64 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~---------------------- 120 (306)
T PLN02725 64 HANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKFAPQPIPETALLT---------------------- 120 (306)
T ss_pred chhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCCCCCCCCHHHhcc----------------------
Confidence 2334568899999999999999985 789999999999998532 133321100
Q ss_pred ccccCCCCC-C-hHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHH----HHhcCceeE
Q psy13944 162 NDILIKPMP-N-TYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV----AVGLGIMRT 233 (1217)
Q Consensus 162 tp~~~~~~P-N-tYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~----~~~~G~l~~ 233 (1217)
....| + .|+.||.++|++++.+. .+++++++||+.|||+... ..+- +......++. ....|....
T Consensus 121 ----~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~-~~~~--~~~~~~~~i~~~~~~~~~~~~~~ 193 (306)
T PLN02725 121 ----GPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDN-FHPE--NSHVIPALIRRFHEAKANGAPEV 193 (306)
T ss_pred ----CCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCC-CCCC--CCcccHHHHHHHHHHhhcCCCeE
Confidence 00112 3 49999999999998775 6899999999999999642 1110 0011122222 223454433
Q ss_pred E-eeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCch
Q psy13944 234 V-YQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTT 311 (1217)
Q Consensus 234 i-~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~ 311 (1217)
+ ++++++.+++|||+|+|++++.++..... ++.||++++ +++..
T Consensus 194 ~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~----------------------------------~~~~ni~~~~~~s~~ 239 (306)
T PLN02725 194 VVWGSGSPLREFLHVDDLADAVVFLMRRYSG----------------------------------AEHVNVGSGDEVTIK 239 (306)
T ss_pred EEcCCCCeeeccccHHHHHHHHHHHHhcccc----------------------------------CcceEeCCCCcccHH
Confidence 3 67889999999999999999888764222 356899988 89999
Q ss_pred HHHHHHHHhhchh
Q psy13944 312 NHVNYIKQNIKEK 324 (1217)
Q Consensus 312 el~~~ia~~~g~~ 324 (1217)
|+++.+++.+|.+
T Consensus 240 e~~~~i~~~~~~~ 252 (306)
T PLN02725 240 ELAELVKEVVGFE 252 (306)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999988743
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=200.87 Aligned_cols=247 Identities=16% Similarity=0.144 Sum_probs=166.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--------cc--cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--------AN--FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--------p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+.... +.-..+... +. ...+++++.||++++ +++..+++++|+|
T Consensus 12 vlItG~~GfIG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~v 84 (338)
T PLN00198 12 ACVIGGTGFLASLLIKLLLQKGYA-VNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDE------ESFEAPIAGCDLV 84 (338)
T ss_pred EEEECCchHHHHHHHHHHHHCCCE-EEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCCh------HHHHHHHhcCCEE
Confidence 558999999999999999874222 210001100 00 113688999999998 7888888899999
Q ss_pred EEcCccCCcc--cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc------cccccccCCCCChHHHHHH
Q psy13944 78 FHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK------KIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 78 iH~AA~v~f~--e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~------~I~E~~y~~p~dp~~~~~~ 149 (1217)
||+||...+. .+...++++|+.|+.+|+++|.+..++++|||+||+.+|+... .++|+.... .
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~----~----- 155 (338)
T PLN00198 85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTD----V----- 155 (338)
T ss_pred EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCc----h-----
Confidence 9999976543 2334577999999999999998865689999999999887431 133322110 0
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
...+.. ....+.|+.||.++|++++.++ .+++++++||++||||.+.+. .... ..++..+.
T Consensus 156 ------~~~~~~-----~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~---~~~~---~~~~~~~~ 218 (338)
T PLN00198 156 ------EFLTSE-----KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSD---IPSS---LSLAMSLI 218 (338)
T ss_pred ------hhhhhc-----CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCC---CCCc---HHHHHHHH
Confidence 000000 0112469999999999999887 689999999999999976431 1111 12233344
Q ss_pred cCceeEEee-CC----CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceee
Q psy13944 228 LGIMRTVYQ-NT----SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYE 302 (1217)
Q Consensus 228 ~G~l~~i~g-~~----~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Yn 302 (1217)
.|....+.+ ++ +..+|||||||+|++++.++..... +..|
T Consensus 219 ~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~----------------------------------~~~~- 263 (338)
T PLN00198 219 TGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESA----------------------------------SGRY- 263 (338)
T ss_pred cCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCc----------------------------------CCcE-
Confidence 443322333 12 2347999999999999988764322 2346
Q ss_pred ccCC-ccCchHHHHHHHHhhc
Q psy13944 303 INHG-NYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 303 I~sg-~~s~~el~~~ia~~~g 322 (1217)
++++ .++..|+++.+.+..+
T Consensus 264 ~~~~~~~s~~el~~~i~~~~~ 284 (338)
T PLN00198 264 ICCAANTSVPELAKFLIKRYP 284 (338)
T ss_pred EEecCCCCHHHHHHHHHHHCC
Confidence 4555 8899999999987654
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=198.52 Aligned_cols=239 Identities=17% Similarity=0.112 Sum_probs=160.7
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHH-HHHhc-----CCccEEEEcCcc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKE-KKVLR-----EDVNIVFHVAAT 83 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~ed-l~~L~-----~~VDiViH~AA~ 83 (1217)
+||+.+.-|..+.++|.+.....+. .+++..+. .....++.+|+.+. .+.++ ++.++ .++|+|||+||.
T Consensus 4 VtGa~GfiG~~l~~~L~~~g~~~v~-~~~~~~~~-~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 78 (308)
T PRK11150 4 VTGGAGFIGSNIVKALNDKGITDIL-VVDNLKDG-TKFVNLVDLDIADY---MDKEDFLAQIMAGDDFGDIEAIFHEGAC 78 (308)
T ss_pred EecCCcHHHHHHHHHHHhCCCceEE-EecCCCcc-hHHHhhhhhhhhhh---hhHHHHHHHHhcccccCCccEEEECcee
Confidence 6899999999999999874322111 11111110 00112334565543 01122 23332 268999999986
Q ss_pred CCc-ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 84 VKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 84 v~f-~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
... ......+++.|+.||.+|+++|++. +. +|||+||+++||+... ++|..+..
T Consensus 79 ~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~~~E~~~~~--------------------- 135 (308)
T PRK11150 79 SSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDFIEEREYEK--------------------- 135 (308)
T ss_pred cCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCCCccCCCCC---------------------
Confidence 432 2234467899999999999999985 55 6999999999986421 22321111
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchh-HHHHHHHhcCceeEE-ee
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL-TAMYVAVGLGIMRTV-YQ 236 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~-~~li~~~~~G~l~~i-~g 236 (1217)
..+.|+.||.++|++++++. .+++++++||++|||++..+. +. +.+. ..++..+..|....+ .+
T Consensus 136 --------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~-~~---~~~~~~~~~~~~~~~~~~~i~~g 203 (308)
T PRK11150 136 --------PLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHK-GS---MASVAFHLNNQLNNGENPKLFEG 203 (308)
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCC-Cc---cchhHHHHHHHHhcCCCCEEecC
Confidence 12579999999999999886 689999999999999976431 11 1111 123345566654333 46
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVN 315 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~ 315 (1217)
+++..+|++||||+|++++.++... . ++.||++++ ++++.|+++
T Consensus 204 ~~~~~r~~i~v~D~a~a~~~~~~~~-~----------------------------------~~~yni~~~~~~s~~el~~ 248 (308)
T PRK11150 204 SENFKRDFVYVGDVAAVNLWFWENG-V----------------------------------SGIFNCGTGRAESFQAVAD 248 (308)
T ss_pred CCceeeeeeeHHHHHHHHHHHHhcC-C----------------------------------CCeEEcCCCCceeHHHHHH
Confidence 6778999999999999998776431 1 358999999 899999999
Q ss_pred HHHHhhch
Q psy13944 316 YIKQNIKE 323 (1217)
Q Consensus 316 ~ia~~~g~ 323 (1217)
.+++..|.
T Consensus 249 ~i~~~~~~ 256 (308)
T PRK11150 249 AVLAYHKK 256 (308)
T ss_pred HHHHHhCC
Confidence 99998874
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-19 Score=205.37 Aligned_cols=151 Identities=19% Similarity=0.166 Sum_probs=114.3
Q ss_pred cccccccccccc---cccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc
Q psy13944 513 LSKYAIHVPDLT---KSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF 589 (1217)
Q Consensus 513 irvYlLkr~~st---leRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f 589 (1217)
.++|||+|..+. .+|+++.+. .+..+ .....++|+++.||+++++|||++.+++.|.++||.|||+||.|++
T Consensus 26 ~kv~cLVRA~s~E~a~~RL~~~~~--~~~~~---~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~ 100 (382)
T COG3320 26 AKVICLVRAQSDEAALARLEKTFD--LYRHW---DELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNH 100 (382)
T ss_pred CcEEEEEecCCHHHHHHHHHHHhh--hhhhh---hhhhcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcc
Confidence 699999998874 444444444 22222 2234689999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhcc
Q psy13944 590 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILI 669 (1217)
Q Consensus 590 ~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~ 669 (1217)
..++.+....||.||..+|++|... +.|.|+||||.+|......-.++.-.. +..+ +...-
T Consensus 101 v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~~~~~~~~----------------~~~~--~~~~~ 161 (382)
T COG3320 101 VFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYSNFTVDFD----------------EISP--TRNVG 161 (382)
T ss_pred cCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccCCCccccc----------------cccc--ccccc
Confidence 9999999999999999999999986 789999999999876533211111000 0000 01113
Q ss_pred CCCCChhHHHHHHHHHHh
Q psy13944 670 KPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 670 ~~~pNtYt~SK~lAE~lv 687 (1217)
+..+++|++|||+||.+|
T Consensus 162 ~~~~~GY~~SKwvaE~Lv 179 (382)
T COG3320 162 QGLAGGYGRSKWVAEKLV 179 (382)
T ss_pred CccCCCcchhHHHHHHHH
Confidence 456789999999977777
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=198.18 Aligned_cols=243 Identities=16% Similarity=0.144 Sum_probs=170.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH--H-----Hhhhc--CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF--D-----RLRKE--NANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf--d-----~Lr~~--~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-.||+.+.-|..+.++|.+...+. +. + ..... ......+++++.+|++++ ++++.+++++|+|
T Consensus 8 vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~d~v 81 (325)
T PLN02989 8 VCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDE------GSFELAIDGCETV 81 (325)
T ss_pred EEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCc------hHHHHHHcCCCEE
Confidence 4589999999999999998742211 00 0 00000 001124688999999998 7888888999999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc-------cccccccCCCCChHHHH
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-------KIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~-------~I~E~~y~~p~dp~~~~ 147 (1217)
||+||..... +.....+++|+.|+.+++++|.+..+.++||++||..+++... .++|+....|.
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~------ 155 (325)
T PLN02989 82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPS------ 155 (325)
T ss_pred EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchh------
Confidence 9999975432 3456788999999999999998754578999999987765321 13333211110
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
......+.|+.||.++|++++.+. .+++++++||++||||++.|..+ ....++..
T Consensus 156 -----------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~------~~~~~i~~ 212 (325)
T PLN02989 156 -----------------FAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLN------FSVAVIVE 212 (325)
T ss_pred -----------------HhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCC------chHHHHHH
Confidence 000112579999999999998876 68999999999999998765311 12234445
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccC
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINH 305 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~s 305 (1217)
+..|... .+ ...+||+||+|+|++++.++..... ++.||+++
T Consensus 213 ~~~~~~~--~~--~~~r~~i~v~Dva~a~~~~l~~~~~----------------------------------~~~~ni~~ 254 (325)
T PLN02989 213 LMKGKNP--FN--TTHHRFVDVRDVALAHVKALETPSA----------------------------------NGRYIIDG 254 (325)
T ss_pred HHcCCCC--CC--CcCcCeeEHHHHHHHHHHHhcCccc----------------------------------CceEEEec
Confidence 5555332 12 3458999999999999988764332 34699965
Q ss_pred CccCchHHHHHHHHhhch
Q psy13944 306 GNYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 306 g~~s~~el~~~ia~~~g~ 323 (1217)
+++++.|+++.+++.++.
T Consensus 255 ~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 255 PVVTIKDIENVLREFFPD 272 (325)
T ss_pred CCCCHHHHHHHHHHHCCC
Confidence 589999999999998763
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.9e-18 Score=193.66 Aligned_cols=241 Identities=19% Similarity=0.165 Sum_probs=180.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhc-------C----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA-------D----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~-------~----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDi 76 (1217)
.=+||+.+.-|..+..+|.+-.- + .-.+.|++ .+...+++..+.+||.++ +.++..+++||.
T Consensus 9 VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~-l~~a~~~l~l~~aDL~d~------~sf~~ai~gcdg 81 (327)
T KOG1502|consen 9 VCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRK-LEGAKERLKLFKADLLDE------GSFDKAIDGCDG 81 (327)
T ss_pred EEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHh-cccCcccceEEecccccc------chHHHHHhCCCE
Confidence 44899999999999999887221 1 11112332 344566799999999999 899999999999
Q ss_pred EEEcCccCCcccC--HHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccc-c------cccccccCCCCChHHHH
Q psy13944 77 VFHVAATVKFDEH--FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNI-K------KIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 77 ViH~AA~v~f~e~--l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~-~------~I~E~~y~~p~dp~~~~ 147 (1217)
|||+|+.+.|+.. ..+.++.+|.||.++|++|++.+.+||||++||..+.... . .++|+.+.+
T Consensus 82 VfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd-------- 153 (327)
T KOG1502|consen 82 VFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSD-------- 153 (327)
T ss_pred EEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCc--------
Confidence 9999999988544 5589999999999999999998889999999997655432 1 255554432
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
++-... --+.|+.||.+||+..++++ .+++++.+-|+.|+||.-.| ..+....++..
T Consensus 154 -------~~~~~~--------~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~------~l~~s~~~~l~ 212 (327)
T KOG1502|consen 154 -------LDFCRC--------KKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP------SLNSSLNALLK 212 (327)
T ss_pred -------HHHHHh--------hHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc------ccchhHHHHHH
Confidence 111110 00579999999999999998 78999999999999997765 23444566677
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccC
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINH 305 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~s 305 (1217)
..+|...... +....||||+|||+|++.|..++.+ ++.|.+.+
T Consensus 213 ~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E~~~a----------------------------------~GRyic~~ 255 (327)
T KOG1502|consen 213 LIKGLAETYP---NFWLAFVDVRDVALAHVLALEKPSA----------------------------------KGRYICVG 255 (327)
T ss_pred HHhcccccCC---CCceeeEeHHHHHHHHHHHHcCccc----------------------------------CceEEEec
Confidence 7777554433 4445599999999999999998777 34566666
Q ss_pred CccCchHHHHHHHHhh
Q psy13944 306 GNYDTTNHVNYIKQNI 321 (1217)
Q Consensus 306 g~~s~~el~~~ia~~~ 321 (1217)
...+..|+++++.+..
T Consensus 256 ~~~~~~ei~~~l~~~~ 271 (327)
T KOG1502|consen 256 EVVSIKEIADILRELF 271 (327)
T ss_pred CcccHHHHHHHHHHhC
Confidence 6666778887777653
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.4e-18 Score=191.82 Aligned_cols=240 Identities=19% Similarity=0.136 Sum_probs=175.0
Q ss_pred cccCCCCCCcccHHHHHHHHhc-Chh--HHHhhh-cC----cc--cCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFA-DDA--FDRLRK-EN----AN--FTERIVVLTADLQSDGLGLDEKEKKVLRED--VNI 76 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~-~~v--fd~Lr~-~~----p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDi 76 (1217)
-.||+.+.-|..+.++|.+... ..+ .++... .. .. ...+++++.+|++++ +++..++++ +|+
T Consensus 3 lItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~d~ 76 (317)
T TIGR01181 3 LVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDR------ELVSRLFTEHQPDA 76 (317)
T ss_pred EEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCH------HHHHHHHhhcCCCE
Confidence 3689999999999999987531 222 221100 00 00 123688999999998 888888877 899
Q ss_pred EEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc---ccccccCCCCChHHHHHHh
Q psy13944 77 VFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK---IEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 77 ViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~---I~E~~y~~p~dp~~~~~~~ 150 (1217)
|||+||....+ +....++++|+.|+.+++++|++...-.++||+||.++||.... +.|....
T Consensus 77 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~------------ 144 (317)
T TIGR01181 77 VVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPL------------ 144 (317)
T ss_pred EEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCC------------
Confidence 99999986533 34567889999999999999987422237999999999986431 1221100
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhc
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL 228 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~ 228 (1217)
.| -+.|+.+|+.+|++++.+. .+++++++||+.+||+...+. . ....++..+..
T Consensus 145 -----------~~------~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-----~--~~~~~~~~~~~ 200 (317)
T TIGR01181 145 -----------AP------SSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-----K--LIPLMITNALA 200 (317)
T ss_pred -----------CC------CCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-----c--HHHHHHHHHhc
Confidence 00 1569999999999998875 689999999999999865321 1 12345555666
Q ss_pred CceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-c
Q psy13944 229 GIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-N 307 (1217)
Q Consensus 229 G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~ 307 (1217)
|....+.+++++.+|++||||+++++..++.+... ++.||++++ +
T Consensus 201 ~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~----------------------------------~~~~~~~~~~~ 246 (317)
T TIGR01181 201 GKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRV----------------------------------GETYNIGGGNE 246 (317)
T ss_pred CCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCC----------------------------------CceEEeCCCCc
Confidence 65555678888999999999999999887753222 568999988 8
Q ss_pred cCchHHHHHHHHhhchh
Q psy13944 308 YDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 308 ~s~~el~~~ia~~~g~~ 324 (1217)
++..|+++.+++.+|.+
T Consensus 247 ~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 247 RTNLEVVETILELLGKD 263 (317)
T ss_pred eeHHHHHHHHHHHhCCC
Confidence 99999999999998853
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=193.59 Aligned_cols=253 Identities=14% Similarity=0.088 Sum_probs=174.7
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcC-hhHHH-----------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFAD-DAFDR-----------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~-----------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
+.-+||+.+.-|..+.++|.+...+ .++++ +.+.......++.++.+|++++ +++..+++
T Consensus 7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~l~~~~~~~ 80 (352)
T PLN02240 7 TILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDK------EALEKVFAST 80 (352)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCH------HHHHHHHHhC
Confidence 3457899999999999999874222 11221 1111111224688999999988 77777765
Q ss_pred CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHH
Q psy13944 73 DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~ 147 (1217)
++|+|||+||..... ......+++|+.|+.+++++|++. ++++|||+||+.+||... .++|+...
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~~~~~~E~~~~--------- 150 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSATVYGQPEEVPCTEEFPL--------- 150 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCCCC---------
Confidence 689999999975432 345678999999999999999884 788999999999987532 13332111
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccc--cchhHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLTAM 222 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~~l 222 (1217)
...+.|+.||.++|++++.+. .+++++++|++++||++....-|.... ......+
T Consensus 151 --------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~ 210 (352)
T PLN02240 151 --------------------SATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPY 210 (352)
T ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHH
Confidence 112579999999999998764 478999999999999864322222111 1112233
Q ss_pred HHHHhcCce--eEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhh
Q psy13944 223 YVAVGLGIM--RTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESI 294 (1217)
Q Consensus 223 i~~~~~G~l--~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~ 294 (1217)
+..+..|.. ..+.+ ++.+.+|||||+|+|++++.++..... .+
T Consensus 211 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~----~~------------------------- 261 (352)
T PLN02240 211 VQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFT----DP------------------------- 261 (352)
T ss_pred HHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhh----cc-------------------------
Confidence 444443432 22333 678999999999999999988865322 00
Q ss_pred hhccceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 295 KKLDVNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 295 ~~~g~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
...++.||++++ +++..|+++.+++.+|.+
T Consensus 262 ~~~~~~yni~~~~~~s~~el~~~i~~~~g~~ 292 (352)
T PLN02240 262 DIGCEAYNLGTGKGTSVLEMVAAFEKASGKK 292 (352)
T ss_pred CCCCceEEccCCCcEeHHHHHHHHHHHhCCC
Confidence 012578999998 999999999999998854
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.7e-18 Score=196.43 Aligned_cols=244 Identities=14% Similarity=0.051 Sum_probs=171.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHHhhhcCc------ccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDRLRKENA------NFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~Lr~~~p------~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiVi 78 (1217)
.-+||+.+.-|..+.++|.+...+. .+++-....+ ....++.++.+|++++ +++..++++ +|+||
T Consensus 7 ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi 80 (349)
T TIGR02622 7 VLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA------AKLRKAIAEFKPEIVF 80 (349)
T ss_pred EEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH------HHHHHHHhhcCCCEEE
Confidence 4478999999999999998743221 1111000000 0123577899999998 888888775 69999
Q ss_pred EcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cccccccCCCCChHHHHHHhhc
Q psy13944 79 HVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 79 H~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
|+||..... ..+...+++|+.|+.+++++|++...+++||++||+.+|+... .+.|....
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~-------------- 146 (349)
T TIGR02622 81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPL-------------- 146 (349)
T ss_pred ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCC--------------
Confidence 999964332 2345788999999999999998864478999999999988532 12221100
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---------CCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
...+.|+.||.++|.+++.++ .+++++++||+.||||+... . -.....++
T Consensus 147 ---------------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~-~~~~~~~~ 205 (349)
T TIGR02622 147 ---------------GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-----E-DRLIPDVI 205 (349)
T ss_pred ---------------CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-----h-hhhhHHHH
Confidence 011569999999999998764 28999999999999986411 1 11223556
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeec
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEI 303 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI 303 (1217)
..+..|.... .+++++.+||+||||+|++++.++.+... . . ...++.|||
T Consensus 206 ~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~~~~----~-~------------------------~~~~~~yni 255 (349)
T TIGR02622 206 RAFSSNKIVI-IRNPDATRPWQHVLEPLSGYLLLAEKLFT----G-Q------------------------AEFAGAWNF 255 (349)
T ss_pred HHHhcCCCeE-ECCCCcccceeeHHHHHHHHHHHHHHHhh----c-C------------------------ccccceeee
Confidence 6666665544 45789999999999999999987764322 0 0 012568999
Q ss_pred cCC---ccCchHHHHHHHHhhc
Q psy13944 304 NHG---NYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 304 ~sg---~~s~~el~~~ia~~~g 322 (1217)
+++ +++..++++.+.+..+
T Consensus 256 ~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 256 GPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred CCCcccCcCHHHHHHHHHHHhc
Confidence 974 7999999998887654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=192.53 Aligned_cols=242 Identities=11% Similarity=-0.012 Sum_probs=171.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHH---------hhhc---CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDR---------LRKE---NANFTERIVVLTADLQSDGLGLDEKEKKVLRED- 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~---------Lr~~---~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~- 73 (1217)
.-+||+.+.-|..+.++|.+..... +.++ +... ......++.++.+|+++. +++..++++
T Consensus 9 vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~ 82 (340)
T PLN02653 9 ALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDA------SSLRRWLDDI 82 (340)
T ss_pred EEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCH------HHHHHHHHHc
Confidence 4489999999999999998742221 1111 1000 000124588999999998 777777664
Q ss_pred -ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCC-----eEEEEcCccccccccc-ccccccCCCCCh
Q psy13944 74 -VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLD-----SFIYVSTAYSNCNIKK-IEEKFYEPLYTH 143 (1217)
Q Consensus 74 -VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk-----~fV~vSTa~v~g~~~~-I~E~~y~~p~dp 143 (1217)
+|+|||+||..... ......+++|+.||.+|+++|++. +++ +|||+||+.+||.... ++|+...
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~----- 156 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSEMYGSTPPPQSETTPF----- 156 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHHHhCCCCCCCCCCCCC-----
Confidence 69999999985432 334567799999999999999885 443 8999999999986431 2222110
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
...+.|+.||+++|++++.++ .+++++..|+.++|||+..+ ..+. .....
T Consensus 157 ------------------------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~ 208 (340)
T PLN02653 157 ------------------------HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITR 208 (340)
T ss_pred ------------------------CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc--ccch--hHHHH
Confidence 012579999999999998876 68888999999999986322 1110 01122
Q ss_pred HHHHHhcCcee-EEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccce
Q psy13944 222 MYVAVGLGIMR-TVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVN 300 (1217)
Q Consensus 222 li~~~~~G~l~-~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~ 300 (1217)
++..+..|... ...|++++.+||+||+|+|+|++.++... . +..
T Consensus 209 ~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~-~----------------------------------~~~ 253 (340)
T PLN02653 209 AVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE-K----------------------------------PDD 253 (340)
T ss_pred HHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC-C----------------------------------CCc
Confidence 23344455433 34588999999999999999999887632 1 346
Q ss_pred eeccCC-ccCchHHHHHHHHhhchh
Q psy13944 301 YEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 301 YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
||++++ ++++.|+++.+++.+|.+
T Consensus 254 yni~~g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 254 YVVATEESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred EEecCCCceeHHHHHHHHHHHcCCC
Confidence 999999 999999999999988753
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.8e-18 Score=184.47 Aligned_cols=237 Identities=14% Similarity=0.103 Sum_probs=178.7
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCc--ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENA--NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAA 82 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA 82 (1217)
.||+.+.-|.++.+||..-... -.|+..++... .-....+.+.-|+..+ ++.+||.|||+||
T Consensus 32 itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----------l~~evD~IyhLAa 100 (350)
T KOG1429|consen 32 ITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----------LLKEVDQIYHLAA 100 (350)
T ss_pred EecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----------HHHHhhhhhhhcc
Confidence 8999999999999999874432 12222222111 1234566777777765 6789999999999
Q ss_pred cC---CcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccc
Q psy13944 83 TV---KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTE 157 (1217)
Q Consensus 83 ~v---~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~ 157 (1217)
.. .|..++-..+.+|+.||.++|-+|++.. ++|+|.||+.|||++.. ..|.. |.+-
T Consensus 101 pasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~y---------------wg~v-- 161 (350)
T KOG1429|consen 101 PASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETY---------------WGNV-- 161 (350)
T ss_pred CCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCcccc---------------cccc--
Confidence 85 4666666789999999999999999963 79999999999998542 11111 1110
Q ss_pred ccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEe
Q psy13944 158 LTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVY 235 (1217)
Q Consensus 158 ~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~ 235 (1217)
.++.| -..|...|.+||.++..|+ .|+.+.|.|+++.|||... |.+. ....-++.....+...+++
T Consensus 162 -npigp------r~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~----~~dg-rvvsnf~~q~lr~epltv~ 229 (350)
T KOG1429|consen 162 -NPIGP------RSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMH----MDDG-RVVSNFIAQALRGEPLTVY 229 (350)
T ss_pred -CcCCc------hhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccc----cCCC-hhhHHHHHHHhcCCCeEEE
Confidence 11111 1479999999999999998 7999999999999998643 4442 2334566777888888999
Q ss_pred eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHH
Q psy13944 236 QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHV 314 (1217)
Q Consensus 236 g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~ 314 (1217)
|+|.+.|.|.+|+|+|+++++++..... +.+|||+. .++..|++
T Consensus 230 g~G~qtRSF~yvsD~Vegll~Lm~s~~~-----------------------------------~pvNiGnp~e~Tm~elA 274 (350)
T KOG1429|consen 230 GDGKQTRSFQYVSDLVEGLLRLMESDYR-----------------------------------GPVNIGNPGEFTMLELA 274 (350)
T ss_pred cCCcceEEEEeHHHHHHHHHHHhcCCCc-----------------------------------CCcccCCccceeHHHHH
Confidence 9999999999999999999999876555 24789887 89999999
Q ss_pred HHHHHhhch
Q psy13944 315 NYIKQNIKE 323 (1217)
Q Consensus 315 ~~ia~~~g~ 323 (1217)
+.+.+..|.
T Consensus 275 emv~~~~~~ 283 (350)
T KOG1429|consen 275 EMVKELIGP 283 (350)
T ss_pred HHHHHHcCC
Confidence 999988754
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-17 Score=189.87 Aligned_cols=223 Identities=14% Similarity=0.018 Sum_probs=158.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v~ 85 (1217)
.-+||+.+.-|..+.++|.+..+-..+++ . -..+.||++++ +.+..+++ ++|+||||||...
T Consensus 3 iLVtG~~GfiGs~l~~~L~~~g~V~~~~~--~--------~~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~Aa~~~ 66 (299)
T PRK09987 3 ILLFGKTGQVGWELQRALAPLGNLIALDV--H--------STDYCGDFSNP------EGVAETVRKIRPDVIVNAAAHTA 66 (299)
T ss_pred EEEECCCCHHHHHHHHHhhccCCEEEecc--c--------cccccCCCCCH------HHHHHHHHhcCCCEEEECCccCC
Confidence 34789999999999999876431111221 0 12457899988 78877776 5899999999875
Q ss_pred cc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 86 FD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 86 f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
.+ ..+..+..+|+.||.+|+++|++. +. +|||+||.+||+.... ..|+..+.
T Consensus 67 ~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~--------------------- 123 (299)
T PRK09987 67 VDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTGDIPWQETDATA--------------------- 123 (299)
T ss_pred cchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCCCCCcCCCCCCC---------------------
Confidence 43 345677899999999999999986 43 7999999999986431 23321111
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeC--C
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQN--T 238 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~--~ 238 (1217)
..|.|+.||+++|+++..+.. +.+|+||++|||+... + ....++..+..|....+.++ +
T Consensus 124 --------P~~~Yg~sK~~~E~~~~~~~~--~~~ilR~~~vyGp~~~-------~--~~~~~~~~~~~~~~~~v~~d~~g 184 (299)
T PRK09987 124 --------PLNVYGETKLAGEKALQEHCA--KHLIFRTSWVYAGKGN-------N--FAKTMLRLAKEREELSVINDQFG 184 (299)
T ss_pred --------CCCHHHHHHHHHHHHHHHhCC--CEEEEecceecCCCCC-------C--HHHHHHHHHhcCCCeEEeCCCcC
Confidence 126799999999999988753 5799999999998532 1 12345555555655566666 5
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYI 317 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~i 317 (1217)
....++..+|+++.++..++..... ++.||++++ +++..|+++.+
T Consensus 185 ~~~~~~~~~d~~~~~~~~~~~~~~~----------------------------------~giyni~~~~~~s~~e~~~~i 230 (299)
T PRK09987 185 APTGAELLADCTAHAIRVALNKPEV----------------------------------AGLYHLVASGTTTWHDYAALV 230 (299)
T ss_pred CCCCHHHHHHHHHHHHHHhhccCCC----------------------------------CCeEEeeCCCCccHHHHHHHH
Confidence 5666666778888877765532211 358999988 89999999999
Q ss_pred HHhhc
Q psy13944 318 KQNIK 322 (1217)
Q Consensus 318 a~~~g 322 (1217)
.+..+
T Consensus 231 ~~~~~ 235 (299)
T PRK09987 231 FEEAR 235 (299)
T ss_pred HHHHH
Confidence 87654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=187.34 Aligned_cols=239 Identities=16% Similarity=0.130 Sum_probs=165.8
Q ss_pred ccCCCCCCcccHHHHHHHHhcChh--HHHhhhcCcccCC--CeEEEEccCCCCCCCCCHHHHHHhc----CCccEEEEcC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDA--FDRLRKENANFTE--RIVVLTADLQSDGLGLDEKEKKVLR----EDVNIVFHVA 81 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~v--fd~Lr~~~p~~~~--kI~~V~GDl~d~~LGLs~edl~~L~----~~VDiViH~A 81 (1217)
.||+.+.-|..+.++|.+.-...+ .++.++ +.... ....+.+|+.++ +.++.+. .++|+|||+|
T Consensus 3 ItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~--~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~~~~~D~vvh~A 74 (314)
T TIGR02197 3 VTGGAGFIGSNLVKALNERGITDILVVDNLRD--GHKFLNLADLVIADYIDKE------DFLDRLEKGAFGKIEAIFHQG 74 (314)
T ss_pred EeCCcchhhHHHHHHHHHcCCceEEEEecCCC--chhhhhhhheeeeccCcch------hHHHHHHhhccCCCCEEEECc
Confidence 588899999999999987542222 222111 11111 113466777776 5566554 4799999999
Q ss_pred ccCCcc-cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc-ccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 82 ATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK-IEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 82 A~v~f~-e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~-I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
|..... ......+++|+.|+.+++++|++. ++ +|||+||+++|++... +.|+..
T Consensus 75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~~~~~~e~~~---------------------- 130 (314)
T TIGR02197 75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDGEAGFREGRE---------------------- 130 (314)
T ss_pred cccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCCCCCcccccC----------------------
Confidence 975432 345578899999999999999985 54 7999999999986431 111100
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEe
Q psy13944 160 VLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVY 235 (1217)
Q Consensus 160 ~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~ 235 (1217)
.....+.|+.||..+|.+++++. .+++++++||+.|||++..+.. ...+ ....++..+..|....+.
T Consensus 131 ------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~ 201 (314)
T TIGR02197 131 ------LERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKG-KMAS--VAFHLFNQIKAGGNVKLF 201 (314)
T ss_pred ------cCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCC-Cccc--HHHHHHHHHhcCCCeEEe
Confidence 00112679999999999998752 4679999999999999754321 1111 122344455555443332
Q ss_pred ------eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-cc
Q psy13944 236 ------QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NY 308 (1217)
Q Consensus 236 ------g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~ 308 (1217)
+++++.++++||||++++++.++.. .. ++.||++++ ++
T Consensus 202 ~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~----------------------------------~~~yni~~~~~~ 246 (314)
T TIGR02197 202 KSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GV----------------------------------SGIFNLGTGRAR 246 (314)
T ss_pred cCccccCCCCceeeeEEHHHHHHHHHHHHhc-cc----------------------------------CceEEcCCCCCc
Confidence 4678889999999999999988765 22 458999998 99
Q ss_pred CchHHHHHHHHhhchh
Q psy13944 309 DTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 309 s~~el~~~ia~~~g~~ 324 (1217)
+.+|+++.+++.+|.+
T Consensus 247 s~~e~~~~i~~~~g~~ 262 (314)
T TIGR02197 247 SFNDLADAVFKALGKD 262 (314)
T ss_pred cHHHHHHHHHHHhCCC
Confidence 9999999999998864
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.5e-18 Score=196.55 Aligned_cols=244 Identities=15% Similarity=0.117 Sum_probs=162.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHH-------Hhhhc--CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFD-------RLRKE--NANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd-------~Lr~~--~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+...+. +.. .+... .+....+++++.||++++ +.++.+++++|+|
T Consensus 8 iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~------~~~~~~~~~~d~V 81 (351)
T PLN02650 8 VCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVE------GSFDDAIRGCTGV 81 (351)
T ss_pred EEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCCh------hhHHHHHhCCCEE
Confidence 4589999999999999998742211 011 11110 011123688999999998 7888888999999
Q ss_pred EEcCccCCcc--cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc----ccccccCCCCChHHHHHHhh
Q psy13944 78 FHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK----IEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 78 iH~AA~v~f~--e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~----I~E~~y~~p~dp~~~~~~~~ 151 (1217)
||+||..... .+....+++|+.||.+|+++|++...+++|||+||+.+++.... .+|.....
T Consensus 82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~------------ 149 (351)
T PLN02650 82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSD------------ 149 (351)
T ss_pred EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCc------------
Confidence 9999976533 23346889999999999999998644789999999877654211 12321100
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH--Hh
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA--VG 227 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~--~~ 227 (1217)
.+... + .....+.|+.||.++|++++.+. .+++++++||++||||.+.+. . +..++.. ..
T Consensus 150 ---~~~~~---~--~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~---~-----~~~~~~~~~~~ 213 (351)
T PLN02650 150 ---LDFCR---R--KKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS---M-----PPSLITALSLI 213 (351)
T ss_pred ---hhhhh---c--cccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC---C-----CccHHHHHHHh
Confidence 00000 0 00111479999999999999887 699999999999999976431 0 1111111 12
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|... ..+. ...+|||||+|+|++++.++..... +..| ++++
T Consensus 214 ~~~~~-~~~~-~~~r~~v~V~Dva~a~~~~l~~~~~----------------------------------~~~~-i~~~~ 256 (351)
T PLN02650 214 TGNEA-HYSI-IKQGQFVHLDDLCNAHIFLFEHPAA----------------------------------EGRY-ICSSH 256 (351)
T ss_pred cCCcc-ccCc-CCCcceeeHHHHHHHHHHHhcCcCc----------------------------------CceE-EecCC
Confidence 22221 1222 2347999999999999988764322 2357 4555
Q ss_pred ccCchHHHHHHHHhhc
Q psy13944 307 NYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g 322 (1217)
++++.|+++.+++.++
T Consensus 257 ~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 257 DATIHDLAKMLREKYP 272 (351)
T ss_pred CcCHHHHHHHHHHhCc
Confidence 8999999999998765
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-17 Score=186.94 Aligned_cols=250 Identities=15% Similarity=0.099 Sum_probs=169.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCc-------c-cCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENA-------N-FTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIV 77 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p-------~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiV 77 (1217)
-+||+.+.-|..+.++|.+.-.+ .++++..+... . ...++.++.+|++++ +.+..+++ ++|+|
T Consensus 4 lVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v 77 (338)
T PRK10675 4 LVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE------ALLTEILHDHAIDTV 77 (338)
T ss_pred EEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCH------HHHHHHHhcCCCCEE
Confidence 36888889999999999864222 11211100000 0 123567889999988 77777665 58999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhc
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
||+||..... ......+++|+.|+.+++++|++. ++++||++||+.+||.... ++|+...
T Consensus 78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~~~~~~E~~~~-------------- 142 (338)
T PRK10675 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQPKIPYVESFPT-------------- 142 (338)
T ss_pred EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCCCCccccccCC--------------
Confidence 9999976432 234578899999999999999985 7889999999999885421 3332110
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccc--cchhHHHHHHHh
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLTAMYVAVG 227 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~~li~~~~ 227 (1217)
+...+.|+.+|..+|+++++++ .+++++++|++.+||+.....-|--+. .......+..+.
T Consensus 143 --------------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 208 (338)
T PRK10675 143 --------------GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVA 208 (338)
T ss_pred --------------CCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHH
Confidence 0112579999999999999875 479999999999999853211111000 011122333333
Q ss_pred cCce--eEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccc
Q psy13944 228 LGIM--RTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDV 299 (1217)
Q Consensus 228 ~G~l--~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~ 299 (1217)
.+.. ..+.+ ++.+.+|+|||||+|++++.++..... . ..++
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~----~---------------------------~~~~ 257 (338)
T PRK10675 209 VGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLAN----K---------------------------PGVH 257 (338)
T ss_pred hcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhc----c---------------------------CCCc
Confidence 3321 22332 567889999999999999988764221 0 0257
Q ss_pred eeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 300 NYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 300 ~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
.||++++ +++..|+++.+.+..|.+
T Consensus 258 ~~ni~~~~~~s~~e~~~~i~~~~g~~ 283 (338)
T PRK10675 258 IYNLGAGVGSSVLDVVNAFSKACGKP 283 (338)
T ss_pred eEEecCCCceeHHHHHHHHHHHhCCC
Confidence 8999988 899999999999998864
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-18 Score=184.37 Aligned_cols=213 Identities=22% Similarity=0.204 Sum_probs=161.9
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCccc----CCCeEEEEccCCCCCCCCCHHHHHHhcCCc--cEEEEcCcc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENANF----TERIVVLTADLQSDGLGLDEKEKKVLREDV--NIVFHVAAT 83 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~----~~kI~~V~GDl~d~~LGLs~edl~~L~~~V--DiViH~AA~ 83 (1217)
++|+.+.-|..+..+|.+.... ++...+...+.. ..++.++.+|+.+. ++++.++++. |+|||+||.
T Consensus 3 I~GatG~iG~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~------~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 3 ITGATGFIGSALVRQLLKKGHE-VIVLSRSSNSESFEEKKLNVEFVIGDLTDK------EQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EETTTSHHHHHHHHHHHHTTTE-EEEEESCSTGGHHHHHHTTEEEEESETTSH------HHHHHHHHHHTESEEEEEBSS
T ss_pred EEccCCHHHHHHHHHHHHcCCc-cccccccccccccccccceEEEEEeecccc------ccccccccccCceEEEEeecc
Confidence 5788888888888888875433 222222222221 12899999999988 8888888766 999999998
Q ss_pred CCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 84 VKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 84 v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
... .......++.|+.++.+++++|++. ++++|||+||+.+|+... .++|+....|
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~------------------ 136 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDPDGEPIDEDSPINP------------------ 136 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSSSSSSBETTSGCCH------------------
T ss_pred ccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc------------------
Confidence 631 1456678999999999999999985 669999999999999763 2344332211
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEee
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQ 236 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g 236 (1217)
-+.|+.+|..+|++++.+. .+++++++||+.|||+. .+.. . .......++..+.+|....+++
T Consensus 137 -----------~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 201 (236)
T PF01370_consen 137 -----------LSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-NPNN-N--SSSFLPSLIRQALKGKPIKIPG 201 (236)
T ss_dssp -----------SSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-SSSS-S--TSSHHHHHHHHHHTTSSEEEES
T ss_pred -----------cccccccccccccccccccccccccccccccccccccc-cccc-c--cccccchhhHHhhcCCcccccC
Confidence 1459999999999999887 59999999999999998 1111 1 1123346777788888778889
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
++++.+|++||+|+|++++.++.+...
T Consensus 202 ~~~~~~~~i~v~D~a~~~~~~~~~~~~ 228 (236)
T PF01370_consen 202 DGSQVRDFIHVDDLAEAIVAALENPKA 228 (236)
T ss_dssp TSSCEEEEEEHHHHHHHHHHHHHHSCT
T ss_pred CCCCccceEEHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999987663
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-17 Score=189.75 Aligned_cols=245 Identities=18% Similarity=0.157 Sum_probs=188.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhc---ChhHHHhhhcC--cc-----cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA---DDAFDRLRKEN--AN-----FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~---~~vfd~Lr~~~--p~-----~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||.++.-|+++.++|.+.-. -.++|.--... +. ...+++.+.||+.+. ..+...+.++ .|
T Consensus 7 vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~------~~i~~a~~~~-~V 79 (361)
T KOG1430|consen 7 VLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDA------NSISNAFQGA-VV 79 (361)
T ss_pred EEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhh------hhhhhhccCc-eE
Confidence 34799999999999999998542 25555221100 11 256789999999998 7888888999 88
Q ss_pred EEcCccC--Cccc-CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc---ccccccCCCCChHHHHHHhh
Q psy13944 78 FHVAATV--KFDE-HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK---IEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 78 iH~AA~v--~f~e-~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~---I~E~~y~~p~dp~~~~~~~~ 151 (1217)
+||||.. .+.. ..+...++||.||.+++++|++. +++++||+||++|..+... -+|.. |.
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~~n~~E~~-p~------------ 145 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPIINGDESL-PY------------ 145 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeecccCCCCC-CC------------
Confidence 8888864 4444 47789999999999999999995 9999999999999876543 12211 10
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcC
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLG 229 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G 229 (1217)
...+++.|+.||+.||+++.+.. .+|-.+.+||+.||||++.- -...++..+..|
T Consensus 146 --------------p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~---------~~~~i~~~~~~g 202 (361)
T KOG1430|consen 146 --------------PLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR---------LLPKIVEALKNG 202 (361)
T ss_pred --------------ccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc---------ccHHHHHHHHcc
Confidence 02345689999999999999987 67999999999999997632 224566677788
Q ss_pred ceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-cc
Q psy13944 230 IMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NY 308 (1217)
Q Consensus 230 ~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~ 308 (1217)
......++++..-|+++++.|+-|++.|+..-.. +.+ ...|+.|+|.++ ++
T Consensus 203 ~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~---~~~-------------------------~~~Gq~yfI~d~~p~ 254 (361)
T KOG1430|consen 203 GFLFKIGDGENLNDFTYGENVAWAHILAARALLD---KSP-------------------------SVNGQFYFITDDTPV 254 (361)
T ss_pred CceEEeeccccccceEEechhHHHHHHHHHHHHh---cCC-------------------------ccCceEEEEeCCCcc
Confidence 8888888889999999999999999988775442 010 125999999999 99
Q ss_pred CchHHHHHHHHhhchh
Q psy13944 309 DTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 309 s~~el~~~ia~~~g~~ 324 (1217)
..|++...+.+.+|..
T Consensus 255 ~~~~~~~~l~~~lg~~ 270 (361)
T KOG1430|consen 255 RFFDFLSPLVKALGYC 270 (361)
T ss_pred hhhHHHHHHHHhcCCC
Confidence 9999888999998876
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.9e-17 Score=190.34 Aligned_cols=248 Identities=17% Similarity=0.152 Sum_probs=161.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHH-------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDR-------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~-------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH 79 (1217)
.-+||+.+.-|..+.++|.+..... +.++ +..... ...+++++.+|++++ +++..+++++|+|||
T Consensus 13 vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~------~~~~~~~~~~d~Vih 85 (353)
T PLN02896 13 YCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK-EGDRLRLFRADLQEE------GSFDEAVKGCDGVFH 85 (353)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc-cCCeEEEEECCCCCH------HHHHHHHcCCCEEEE
Confidence 4589999999999999998642211 1111 111101 124688999999998 888888889999999
Q ss_pred cCccCCcc-----cCHHH-----HHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc-------cccccccCCCCC
Q psy13944 80 VAATVKFD-----EHFQT-----AFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-------KIEEKFYEPLYT 142 (1217)
Q Consensus 80 ~AA~v~f~-----e~l~~-----a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~-------~I~E~~y~~p~d 142 (1217)
+||..... ..+.. .+++|+.|+.+|+++|++...+++||++||+.+||... .++|+. +.|.+
T Consensus 86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~-~~p~~ 164 (353)
T PLN02896 86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETC-QTPID 164 (353)
T ss_pred CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCccc-CCcHH
Confidence 99986432 13333 44556799999999998765588999999999998432 123321 01100
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
...+ .....+.|+.||.++|++++.++ .+++++++||++||||++.+. +....
T Consensus 165 -----------------~~~~--~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~------~~~~~ 219 (353)
T PLN02896 165 -----------------HVWN--TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS------VPSSI 219 (353)
T ss_pred -----------------Hhhc--cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC------CCchH
Confidence 0000 00111369999999999999887 799999999999999976431 11111
Q ss_pred HHHHHHhcCceeE--Eee---CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhh
Q psy13944 221 AMYVAVGLGIMRT--VYQ---NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIK 295 (1217)
Q Consensus 221 ~li~~~~~G~l~~--i~g---~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~ 295 (1217)
..+.....|.... ..+ .....+|||||||+|++++.++.....
T Consensus 220 ~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~-------------------------------- 267 (353)
T PLN02896 220 QVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA-------------------------------- 267 (353)
T ss_pred HHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc--------------------------------
Confidence 1111112332111 111 112246999999999999988864222
Q ss_pred hccceeeccCCccCchHHHHHHHHhhc
Q psy13944 296 KLDVNYEINHGNYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 296 ~~g~~YnI~sg~~s~~el~~~ia~~~g 322 (1217)
+..|++++.+++..|+++.+++.++
T Consensus 268 --~~~~~~~~~~~s~~el~~~i~~~~~ 292 (353)
T PLN02896 268 --EGRYICCVDSYDMSELINHLSKEYP 292 (353)
T ss_pred --CccEEecCCCCCHHHHHHHHHHhCC
Confidence 2357544338999999999998775
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-16 Score=179.54 Aligned_cols=221 Identities=11% Similarity=0.102 Sum_probs=160.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhc-Chh--HHH-------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA-DDA--FDR-------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~-~~v--fd~-------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+... ..+ +++ +.+..+ ..++.++.||++++ +++..+++++|+|
T Consensus 7 vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~------~~l~~~~~~iD~V 78 (324)
T TIGR03589 7 ILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDK------ERLTRALRGVDYV 78 (324)
T ss_pred EEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCH------HHHHHHHhcCCEE
Confidence 44789999999999999987531 112 221 111111 14688999999998 8888888999999
Q ss_pred EEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 78 FHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 78 iH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
||+||.... .......+++|+.|+.+++++|++. ++++||++||.... .|
T Consensus 79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~------------~p-------------- 131 (324)
T TIGR03589 79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA------------NP-------------- 131 (324)
T ss_pred EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC------------CC--------------
Confidence 999997532 2345578999999999999999984 78899999995321 00
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcC
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLG 229 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G 229 (1217)
.++|+.||+++|+++..+. .+++++++||++|||+... ....+...+..|
T Consensus 132 ---------------~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~----------~i~~~~~~~~~~ 186 (324)
T TIGR03589 132 ---------------INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS----------VVPFFKSLKEEG 186 (324)
T ss_pred ---------------CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC----------cHHHHHHHHHhC
Confidence 1469999999999987632 6899999999999997421 112333344445
Q ss_pred ceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-cc
Q psy13944 230 IMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NY 308 (1217)
Q Consensus 230 ~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~ 308 (1217)
......+++++.+||+||||+|++++.++..... ++.| ++++ .+
T Consensus 187 ~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~----------------------------------~~~~-~~~~~~~ 231 (324)
T TIGR03589 187 VTELPITDPRMTRFWITLEQGVNFVLKSLERMLG----------------------------------GEIF-VPKIPSM 231 (324)
T ss_pred CCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCC----------------------------------CCEE-ccCCCcE
Confidence 3122234678899999999999999988764211 4566 5666 78
Q ss_pred CchHHHHHHHHhhch
Q psy13944 309 DTTNHVNYIKQNIKE 323 (1217)
Q Consensus 309 s~~el~~~ia~~~g~ 323 (1217)
+..|+++.+.+....
T Consensus 232 sv~el~~~i~~~~~~ 246 (324)
T TIGR03589 232 KITDLAEAMAPECPH 246 (324)
T ss_pred EHHHHHHHHHhhCCe
Confidence 999999999886543
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-16 Score=179.71 Aligned_cols=240 Identities=19% Similarity=0.159 Sum_probs=169.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~ 85 (1217)
.-++|+.+.-|..+.++|.+.... .+.++-....+. ...+++++.+|++++ +++..+++++|+|||+|+...
T Consensus 3 vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~------~~l~~~~~~~d~vi~~a~~~~ 76 (328)
T TIGR03466 3 VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDP------ASLRKAVAGCRALFHVAADYR 76 (328)
T ss_pred EEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCH------HHHHHHHhCCCEEEEeceecc
Confidence 457899999999999999874322 122221110011 123688999999998 888888999999999998754
Q ss_pred c-ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 86 F-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 86 f-~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
. .+.....+++|+.|+.+++++|++. ++++||++||.++|+... .++|.....|
T Consensus 77 ~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~--------------------- 134 (328)
T TIGR03466 77 LWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGDGTPADETTPSSL--------------------- 134 (328)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCCCCCcCccCCCCc---------------------
Confidence 2 3456778999999999999999984 789999999999988521 1233211110
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCC
Q psy13944 162 NDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTS 239 (1217)
Q Consensus 162 tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~ 239 (1217)
....+.|+.+|.++|++++++. .+++++++||+.+||++.... .....++..+..+...... +
T Consensus 135 -----~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~---~ 199 (328)
T TIGR03466 135 -----DDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKP-------TPTGRIIVDFLNGKMPAYV---D 199 (328)
T ss_pred -----ccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCC-------CcHHHHHHHHHcCCCceee---C
Confidence 1112469999999999999886 589999999999999864211 0112333444444332222 3
Q ss_pred ceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHHH
Q psy13944 240 NIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIKQ 319 (1217)
Q Consensus 240 ~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia~ 319 (1217)
...+++||+|+|++++.++.+... +..|++++.+++..|+++.+++
T Consensus 200 ~~~~~i~v~D~a~a~~~~~~~~~~----------------------------------~~~~~~~~~~~s~~e~~~~i~~ 245 (328)
T TIGR03466 200 TGLNLVHVDDVAEGHLLALERGRI----------------------------------GERYILGGENLTLKQILDKLAE 245 (328)
T ss_pred CCcceEEHHHHHHHHHHHHhCCCC----------------------------------CceEEecCCCcCHHHHHHHHHH
Confidence 346899999999999888754222 4568887559999999999999
Q ss_pred hhchh
Q psy13944 320 NIKEK 324 (1217)
Q Consensus 320 ~~g~~ 324 (1217)
.+|.+
T Consensus 246 ~~g~~ 250 (328)
T TIGR03466 246 ITGRP 250 (328)
T ss_pred HhCCC
Confidence 98865
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-16 Score=178.03 Aligned_cols=220 Identities=19% Similarity=0.096 Sum_probs=158.7
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc--cEEEEcCccCCcc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDV--NIVFHVAATVKFD 87 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V--DiViH~AA~v~f~ 87 (1217)
.+|+.+.-|..+.++|.+.. ..+.-.-| ..+|+.++ +++..+++++ |+|||+||.....
T Consensus 4 v~G~tG~iG~~l~~~l~~~g-~~v~~~~r------------~~~d~~~~------~~~~~~~~~~~~d~vi~~a~~~~~~ 64 (287)
T TIGR01214 4 ITGANGQLGRELVQQLSPEG-RVVVALTS------------SQLDLTDP------EALERLLRAIRPDAVVNTAAYTDVD 64 (287)
T ss_pred EEcCCCHHHHHHHHHHHhcC-CEEEEeCC------------cccCCCCH------HHHHHHHHhCCCCEEEECCcccccc
Confidence 57888888888888887632 12211001 15788887 7888877765 9999999976543
Q ss_pred ---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcccccccc
Q psy13944 88 ---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLN 162 (1217)
Q Consensus 88 ---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~t 162 (1217)
.....++++|+.|+.+++++|++. +. +|||+||+++|+... .++|...+
T Consensus 65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~~~~~~E~~~~------------------------ 118 (287)
T TIGR01214 65 GAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDGEGKRPYREDDAT------------------------ 118 (287)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecCCCCCCCCCCCCC------------------------
Confidence 245578899999999999999885 43 899999999997632 12232111
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee
Q psy13944 163 DILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV 242 (1217)
Q Consensus 163 p~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~ 242 (1217)
...+.|+.+|..+|++++.+ +++++|+||++|||+... ......++..+..+....+.+ +...
T Consensus 119 -----~~~~~Y~~~K~~~E~~~~~~--~~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~~~~--~~~~ 181 (287)
T TIGR01214 119 -----NPLNVYGQSKLAGEQAIRAA--GPNALIVRTSWLYGGGGG--------RNFVRTMLRLAGRGEELRVVD--DQIG 181 (287)
T ss_pred -----CCcchhhHHHHHHHHHHHHh--CCCeEEEEeeecccCCCC--------CCHHHHHHHHhhcCCCceEec--CCCc
Confidence 11257999999999999876 679999999999999631 111234454444443323333 4678
Q ss_pred ccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhh
Q psy13944 243 DMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNI 321 (1217)
Q Consensus 243 D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~ 321 (1217)
+++++||+|++++.++..... .++.||++++ .++..|+++.+++.+
T Consensus 182 ~~v~v~Dva~a~~~~~~~~~~---------------------------------~~~~~ni~~~~~~s~~e~~~~i~~~~ 228 (287)
T TIGR01214 182 SPTYAKDLARVIAALLQRLAR---------------------------------ARGVYHLANSGQCSWYEFAQAIFEEA 228 (287)
T ss_pred CCcCHHHHHHHHHHHHhhccC---------------------------------CCCeEEEECCCCcCHHHHHHHHHHHh
Confidence 999999999999988865422 1568999887 899999999999998
Q ss_pred chh
Q psy13944 322 KEK 324 (1217)
Q Consensus 322 g~~ 324 (1217)
|.+
T Consensus 229 ~~~ 231 (287)
T TIGR01214 229 GAD 231 (287)
T ss_pred Ccc
Confidence 865
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-16 Score=216.07 Aligned_cols=257 Identities=23% Similarity=0.237 Sum_probs=173.4
Q ss_pred ccCCCCCCcccHHHHHHHHh---cChhH------------HHhhhc-------CcccCCCeEEEEccCCCCCCCCCHHHH
Q psy13944 10 HNGAKTCKHNSILWVAKDFF---ADDAF------------DRLRKE-------NANFTERIVVLTADLQSDGLGLDEKEK 67 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l---~~~vf------------d~Lr~~-------~p~~~~kI~~V~GDl~d~~LGLs~edl 67 (1217)
.||+.+.-|..+.++|.+.. ...++ .++++. .+...++++++.||++++.|||+++.+
T Consensus 976 vTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~ 1055 (1389)
T TIGR03443 976 LTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKW 1055 (1389)
T ss_pred EeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHH
Confidence 68888888888888887543 11111 222211 112345899999999999999999999
Q ss_pred HHhcCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHH
Q psy13944 68 KVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIE 145 (1217)
Q Consensus 68 ~~L~~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~ 145 (1217)
..+..++|+|||+||.+++..++..+...|+.||.+++++|++. ++++|+|+||..+++.... ..+.......
T Consensus 1056 ~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~---- 1130 (1389)
T TIGR03443 1056 SDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSDELVQAGG---- 1130 (1389)
T ss_pred HHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhhhhhhccC----
Confidence 99999999999999999998888888889999999999999984 7889999999999874221 0110000000
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
....++. .. .......+++|+.||++||+++..+. .+++++|+||++|+|+...+. |...- ....++.
T Consensus 1131 -----~~~~e~~--~~-~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~--~~~~~-~~~~~~~ 1199 (1389)
T TIGR03443 1131 -----AGIPESD--DL-MGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGA--TNTDD-FLLRMLK 1199 (1389)
T ss_pred -----CCCCccc--cc-ccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCC--CCchh-HHHHHHH
Confidence 0000100 00 00112345789999999999998876 789999999999999965432 21111 1112222
Q ss_pred HH-hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhh
Q psy13944 225 AV-GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKK 296 (1217)
Q Consensus 225 ~~-~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~ 296 (1217)
+. ..|. ..+....+|++||||||++++.++..... . .....||+.|+...+|.+.+..
T Consensus 1200 ~~~~~~~----~p~~~~~~~~~~Vddva~ai~~~~~~~~~----~------~~~~i~~~~~~~~~~~~~~~~~ 1258 (1389)
T TIGR03443 1200 GCIQLGL----IPNINNTVNMVPVDHVARVVVAAALNPPK----E------SELAVAHVTGHPRIRFNDFLGT 1258 (1389)
T ss_pred HHHHhCC----cCCCCCccccccHHHHHHHHHHHHhCCcc----c------CCCCEEEeCCCCCCcHHHHHHH
Confidence 22 1222 22445679999999999999988764322 0 1234678888877777777665
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-16 Score=188.23 Aligned_cols=242 Identities=14% Similarity=0.092 Sum_probs=164.1
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh-h-H---H---HhhhcC--c---ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccE
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD-A-F---D---RLRKEN--A---NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~-v-f---d---~Lr~~~--p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDi 76 (1217)
+||+.+.-|..+.++|.+-.... + . + .+++.. . ....++.++.+|++++ +++..+++++|.
T Consensus 58 VTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~------~~l~~~i~~~d~ 131 (367)
T PLN02686 58 VTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEP------ESLHEAFDGCAG 131 (367)
T ss_pred EECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCH------HHHHHHHHhccE
Confidence 68999999999999998732211 1 0 1 111100 0 0113588999999998 888888899999
Q ss_pred EEEcCccCCccc---CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCc--cccccc--c----cccccccCCCCChHH
Q psy13944 77 VFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA--YSNCNI--K----KIEEKFYEPLYTHIE 145 (1217)
Q Consensus 77 ViH~AA~v~f~e---~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa--~v~g~~--~----~I~E~~y~~p~dp~~ 145 (1217)
|||+|+.+.... ......++|+.||.+++++|++..++++|||+||+ .+|+.. . .++|..+.
T Consensus 132 V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~------- 204 (367)
T PLN02686 132 VFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWS------- 204 (367)
T ss_pred EEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCC-------
Confidence 999999864322 12356788999999999999986579999999996 466531 1 12222110
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
+++. .....+.|+.||.++|++++.+. .+++++++||++||||...+. .+..++
T Consensus 205 --------~~~~--------~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~--------~~~~~~ 260 (367)
T PLN02686 205 --------DESF--------CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRR--------NSTATI 260 (367)
T ss_pred --------Chhh--------cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCC--------CChhHH
Confidence 0000 00112469999999999998876 689999999999999964321 011222
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeec
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEI 303 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI 303 (1217)
.+..|.. .+.+++ ..+++||||+|+|++.++..... . . .++.| +
T Consensus 261 -~~~~g~~-~~~g~g--~~~~v~V~Dva~A~~~al~~~~~----~-~--------------------------~~~~y-i 304 (367)
T PLN02686 261 -AYLKGAQ-EMLADG--LLATADVERLAEAHVCVYEAMGN----K-T--------------------------AFGRY-I 304 (367)
T ss_pred -HHhcCCC-ccCCCC--CcCeEEHHHHHHHHHHHHhccCC----C-C--------------------------CCCcE-E
Confidence 3344532 244444 45799999999999988864211 0 0 14567 7
Q ss_pred cCC-ccCchHHHHHHHHhhchh
Q psy13944 304 NHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 304 ~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
+++ +++..|+++.+++.+|.+
T Consensus 305 ~~g~~~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 305 CFDHVVSREDEAEELARQIGLP 326 (367)
T ss_pred EeCCCccHHHHHHHHHHHcCCC
Confidence 777 999999999999999865
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.6e-16 Score=177.29 Aligned_cols=249 Identities=17% Similarity=0.110 Sum_probs=169.8
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcc----c--CCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENAN----F--TERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFH 79 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~----~--~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH 79 (1217)
-.+|+.+.-|..+.++|.+.-.+ .+.++..+..+. . ..+++++.+|++++ +++..+++ ++|+|||
T Consensus 3 lV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~d~vv~ 76 (328)
T TIGR01179 3 LVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDR------ELLDRLFEEHKIDAVIH 76 (328)
T ss_pred EEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCH------HHHHHHHHhCCCcEEEE
Confidence 36888889999999998774222 112211111111 1 11577899999998 77777765 6899999
Q ss_pred cCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCC
Q psy13944 80 VAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 80 ~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
+||..... ......++.|+.|+.+++++|.+. ++++||++||.++|+.... ++|+...
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~~~~~e~~~~---------------- 139 (328)
T TIGR01179 77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSSIPISEDSPL---------------- 139 (328)
T ss_pred CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCCCCccccCCC----------------
Confidence 99976432 233467889999999999999884 6789999999988875321 2222100
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccc-cchhHHHHHHHhc--
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKG-MNGLTAMYVAVGL-- 228 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn-~~g~~~li~~~~~-- 228 (1217)
...+.|+.+|+.+|++++.+. .+++++|+||+.+||+...+..|+... .......+.....
T Consensus 140 -------------~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (328)
T TIGR01179 140 -------------GPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGK 206 (328)
T ss_pred -------------CCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhC
Confidence 112569999999999998875 689999999999999976554443211 1111111112222
Q ss_pred CceeEEe------eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceee
Q psy13944 229 GIMRTVY------QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYE 302 (1217)
Q Consensus 229 G~l~~i~------g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Yn 302 (1217)
+....+. .+++..+++||++|+++++..++..... . ..++.||
T Consensus 207 ~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~----~---------------------------~~~~~~n 255 (328)
T TIGR01179 207 RDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLN----G---------------------------GESHVYN 255 (328)
T ss_pred CCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhc----C---------------------------CCcceEE
Confidence 1111121 2567889999999999999988765322 0 1257899
Q ss_pred ccCC-ccCchHHHHHHHHhhchh
Q psy13944 303 INHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 303 I~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
++++ +++..|+++.+++.+|.+
T Consensus 256 ~~~~~~~s~~ei~~~~~~~~g~~ 278 (328)
T TIGR01179 256 LGYGQGFSVLEVIEAFKKVSGVD 278 (328)
T ss_pred cCCCCcccHHHHHHHHHHHhCCC
Confidence 9888 899999999999999865
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.8e-16 Score=170.38 Aligned_cols=123 Identities=22% Similarity=0.159 Sum_probs=99.4
Q ss_pred cchhhhhhhhcCcCCcCc--EEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchhcHH---HHHHHHHHHHH
Q psy13944 533 ADDAFDLLRKENVNFTER--IVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDEHFQ---TAFEINCKGTE 605 (1217)
Q Consensus 533 k~~vfd~l~~~~~~~~~k--V~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~~~~---~~~~~NV~GT~ 605 (1217)
+--++|+|.....+...+ +.+++|||.|.. .++++++ ++|.|||+||.....|+.+ ++++.||.||.
T Consensus 26 ~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~------~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl 99 (329)
T COG1087 26 EVVVLDNLSNGHKIALLKLQFKFYEGDLLDRA------LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTL 99 (329)
T ss_pred eEEEEecCCCCCHHHhhhccCceEEeccccHH------HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHH
Confidence 334667777666555555 689999999964 3666654 6899999999988887776 68899999999
Q ss_pred HHHHHHHhcCCCcEEEEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHH
Q psy13944 606 KLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAW 683 (1217)
Q Consensus 606 nLLelA~~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lA 683 (1217)
+||++|++. ++++|||.|||.|||+.. ||.|+....|. |+||.||.+.
T Consensus 100 ~Ll~am~~~-gv~~~vFSStAavYG~p~~~PI~E~~~~~p~-----------------------------NPYG~sKlm~ 149 (329)
T COG1087 100 NLIEAMLQT-GVKKFIFSSTAAVYGEPTTSPISETSPLAPI-----------------------------NPYGRSKLMS 149 (329)
T ss_pred HHHHHHHHh-CCCEEEEecchhhcCCCCCcccCCCCCCCCC-----------------------------CcchhHHHHH
Confidence 999999998 899999999999999876 78888654442 5699999998
Q ss_pred HHHhhhhc
Q psy13944 684 YIICLSFW 691 (1217)
Q Consensus 684 E~lv~~y~ 691 (1217)
|++...|.
T Consensus 150 E~iL~d~~ 157 (329)
T COG1087 150 EEILRDAA 157 (329)
T ss_pred HHHHHHHH
Confidence 88886653
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-15 Score=168.14 Aligned_cols=108 Identities=21% Similarity=0.219 Sum_probs=85.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchhcHH---HHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDEHFQ---TAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~~~~---~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+..+++|||.|.. .+.+++. ++|+|+|+||....+.++. .++++||.||.+|||+|++....-+|+||
T Consensus 51 ~~~~fv~~DI~D~~------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HI 124 (340)
T COG1088 51 PRYRFVQGDICDRE------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHI 124 (340)
T ss_pred CCceEEeccccCHH------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEe
Confidence 57999999999954 5777776 5899999999888877665 79999999999999999997333489999
Q ss_pred ccceeecCccc----ccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 624 STAYSNCNIKK----IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 624 STa~v~g~~~~----I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
||-.|||+... .+|.. |..| . ++|+.||+.|.++|++|.
T Consensus 125 STDEVYG~l~~~~~~FtE~t---p~~P------------------------s--SPYSASKAasD~lVray~ 167 (340)
T COG1088 125 STDEVYGDLGLDDDAFTETT---PYNP------------------------S--SPYSASKAASDLLVRAYV 167 (340)
T ss_pred ccccccccccCCCCCcccCC---CCCC------------------------C--CCcchhhhhHHHHHHHHH
Confidence 99999998542 23332 1111 1 249999999999998875
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-15 Score=168.79 Aligned_cols=248 Identities=15% Similarity=0.108 Sum_probs=178.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCccc--CCCeEEEEccCCCCCCCCCHHHHHHhcCC--c
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANF--TERIVVLTADLQSDGLGLDEKEKKVLRED--V 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~~--V 74 (1217)
.-.||+.+--|.+..-+|.+-.-. .....+++-.... -++|.++.||++|. +.++++++. .
T Consensus 5 VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~------~~L~kvF~~~~f 78 (343)
T KOG1371|consen 5 VLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDA------EALEKLFSEVKF 78 (343)
T ss_pred EEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCH------HHHHHHHhhcCC
Confidence 347888888898888888873221 2222222222223 37899999999998 899999875 5
Q ss_pred cEEEEcCccCCcccC---HHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHH
Q psy13944 75 NIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 75 DiViH~AA~v~f~e~---l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~ 149 (1217)
|.|+|+||.....++ +..++..|+.||.+||+.|++. +++.+|+.||+.+||.... +.|+...
T Consensus 79 d~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvYG~p~~ip~te~~~t----------- 146 (343)
T KOG1371|consen 79 DAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVYGLPTKVPITEEDPT----------- 146 (343)
T ss_pred ceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeeecCcceeeccCcCCC-----------
Confidence 999999998654332 3468899999999999999996 5999999999999998653 3332211
Q ss_pred hhcCCcccccccccccCCCCC-ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCC-----cccccccchhHH
Q psy13944 150 INSCSHTELTVLNDILIKPMP-NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPC-----PMWVKGMNGLTA 221 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~-----pGWidn~~g~~~ 221 (1217)
++| |.|+.||...|.++..+. .++.++++|.++++|..-... .|...++. |
T Consensus 147 ------------------~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~-p-- 205 (343)
T KOG1371|consen 147 ------------------DQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLL-P-- 205 (343)
T ss_pred ------------------CCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCccccc-c--
Confidence 122 789999999999999987 568999999999999322222 22222221 1
Q ss_pred HHHHHhcCcee--E------EeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhh
Q psy13944 222 MYVAVGLGIMR--T------VYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEES 293 (1217)
Q Consensus 222 li~~~~~G~l~--~------i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~ 293 (1217)
.+..+..|..+ . ...+|+.++|+++|-|.|+..+.|+.+... ..
T Consensus 206 ~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~----~~------------------------ 257 (343)
T KOG1371|consen 206 YVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRG----AA------------------------ 257 (343)
T ss_pred cccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhcccc----ch------------------------
Confidence 11222222221 1 123678999999999999999988876443 11
Q ss_pred hhhccceeeccCC-ccCchHHHHHHHHhhchhh
Q psy13944 294 IKKLDVNYEINHG-NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 294 ~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~~~ 325 (1217)
.-++||++++ +.+..+++++++++.|.+.
T Consensus 258 ---~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~ 287 (343)
T KOG1371|consen 258 ---EFGVYNLGTGKGSSVLELVTAFEKALGVKI 287 (343)
T ss_pred ---heeeEeecCCCCccHHHHHHHHHHHhcCCC
Confidence 1238999999 9999999999999999874
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=8e-15 Score=184.41 Aligned_cols=111 Identities=25% Similarity=0.363 Sum_probs=90.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.||++++++|++.++++.+ .++|+||||||.+++..+.....++|+.||.+++++|++. ++++|||+||..+
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v 128 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAV 128 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEecccc
Confidence 5699999999999999999888888 8999999999998888777788899999999999999987 6899999999999
Q ss_pred ecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 629 NCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 629 ~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
+|... ..+|...+. ....++.|+.||+.+|.++
T Consensus 129 ~g~~~~~~~e~~~~~--------------------------~~~~~~~Y~~sK~~~E~~~ 162 (657)
T PRK07201 129 AGDYEGVFREDDFDE--------------------------GQGLPTPYHRTKFEAEKLV 162 (657)
T ss_pred ccCccCccccccchh--------------------------hcCCCCchHHHHHHHHHHH
Confidence 88643 223321110 1123467999999988777
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=5e-15 Score=172.60 Aligned_cols=106 Identities=17% Similarity=0.190 Sum_probs=81.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.++.++.||+++. +.+..+++++|+|||+||..... .......++|+.||.+||++|++. ++++|||+||
T Consensus 69 ~~~~~~~~Di~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS 141 (348)
T PRK15181 69 SRFIFIQGDIRKF------TDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAAS 141 (348)
T ss_pred CceEEEEccCCCH------HHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeec
Confidence 5689999999984 35777888999999999975533 334467899999999999999997 7899999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+.+||... ++.|+.... ..+.|+.||.++|.++..|
T Consensus 142 ~~vyg~~~~~~~~e~~~~~-----------------------------p~~~Y~~sK~~~e~~~~~~ 179 (348)
T PRK15181 142 SSTYGDHPDLPKIEERIGR-----------------------------PLSPYAVTKYVNELYADVF 179 (348)
T ss_pred hHhhCCCCCCCCCCCCCCC-----------------------------CCChhhHHHHHHHHHHHHH
Confidence 99998532 222321111 1135999999988888554
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-15 Score=168.42 Aligned_cols=105 Identities=22% Similarity=0.231 Sum_probs=83.0
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchh--cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDE--HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~--~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++.|||++++ ++..+++++|+|||+||.+.... +.+..+++||.||+|||++|++. ++++|||+||+.+
T Consensus 47 ~~~~~~Di~d~~------~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~v 119 (280)
T PF01073_consen 47 KEYIQGDITDPE------SLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISV 119 (280)
T ss_pred eeEEEeccccHH------HHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcce
Confidence 449999999964 78888999999999999877654 56679999999999999999997 8999999999998
Q ss_pred ecC---cccc---cccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 629 NCN---IKKI---EEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 629 ~g~---~~~I---~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+++ ..++ +|... ....+.+.|+.||++||.+++.
T Consensus 120 v~~~~~~~~~~~~dE~~~---------------------------~~~~~~~~Y~~SK~~AE~~V~~ 159 (280)
T PF01073_consen 120 VFDNYKGDPIINGDEDTP---------------------------YPSSPLDPYAESKALAEKAVLE 159 (280)
T ss_pred eEeccCCCCcccCCcCCc---------------------------ccccccCchHHHHHHHHHHHHh
Confidence 876 2221 22211 0112456799999999988854
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=165.57 Aligned_cols=234 Identities=11% Similarity=0.048 Sum_probs=157.6
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcCh-hHHH----------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCcc
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFADD-AFDR----------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVN 75 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~----------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VD 75 (1217)
..-+||+.+.-|..+.++|.+..... ...+ +.. ......+++++.+|++++ +++..++.++|
T Consensus 8 ~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~-l~~~~~~~~~~~~Dl~d~------~~~~~~l~~~d 80 (297)
T PLN02583 8 SVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRG-LSCEEERLKVFDVDPLDY------HSILDALKGCS 80 (297)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHh-cccCCCceEEEEecCCCH------HHHHHHHcCCC
Confidence 35689999999999999998732211 1110 111 011124689999999998 78888889999
Q ss_pred EEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccc--c-c----cccccccCCCCChHHHH
Q psy13944 76 IVFHVAATVK-FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCN--I-K----KIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 76 iViH~AA~v~-f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~--~-~----~I~E~~y~~p~dp~~~~ 147 (1217)
.|+|+++... .....+..+++|+.||.+++++|.+..++++||++||..+++. . . .++|+.+..+
T Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~------- 153 (297)
T PLN02583 81 GLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQ------- 153 (297)
T ss_pred EEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCH-------
Confidence 9999887653 2223567899999999999999987556889999999765421 1 0 1233221110
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
.........|+.||.+||++++.+. .+++++++||+.||||...+.. .
T Consensus 154 ----------------~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----------~---- 203 (297)
T PLN02583 154 ----------------NFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----------P---- 203 (297)
T ss_pred ----------------HHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----------h----
Confidence 0000111359999999999998875 6899999999999998653310 0
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccC
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINH 305 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~s 305 (1217)
...+... ..+ ....++|+|||||+|+++|+..+.. ++.|.+++
T Consensus 204 ~~~~~~~-~~~--~~~~~~v~V~Dva~a~~~al~~~~~----------------------------------~~r~~~~~ 246 (297)
T PLN02583 204 YLKGAAQ-MYE--NGVLVTVDVNFLVDAHIRAFEDVSS----------------------------------YGRYLCFN 246 (297)
T ss_pred hhcCCcc-cCc--ccCcceEEHHHHHHHHHHHhcCccc----------------------------------CCcEEEec
Confidence 1122111 111 2346799999999999999875443 33677877
Q ss_pred CccCch-HHHHHHHHhh
Q psy13944 306 GNYDTT-NHVNYIKQNI 321 (1217)
Q Consensus 306 g~~s~~-el~~~ia~~~ 321 (1217)
+..+.+ ++++.+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~ 263 (297)
T PLN02583 247 HIVNTEEDAVKLAQMLS 263 (297)
T ss_pred CCCccHHHHHHHHHHhC
Confidence 766654 6777777654
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.1e-14 Score=162.76 Aligned_cols=217 Identities=11% Similarity=0.021 Sum_probs=145.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v~ 85 (1217)
.-+||+.+.-|.++.++|.+... ++....+|+.+. +.+...++ ++|+|||+||...
T Consensus 12 iLVtG~tGfiG~~l~~~L~~~g~----------------~V~~~~~~~~~~------~~v~~~l~~~~~D~ViH~Aa~~~ 69 (298)
T PLN02778 12 FLIYGKTGWIGGLLGKLCQEQGI----------------DFHYGSGRLENR------ASLEADIDAVKPTHVFNAAGVTG 69 (298)
T ss_pred EEEECCCCHHHHHHHHHHHhCCC----------------EEEEecCccCCH------HHHHHHHHhcCCCEEEECCcccC
Confidence 33899999999999999876321 122334666654 44444443 6899999999863
Q ss_pred ------cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccc
Q psy13944 86 ------FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTE 157 (1217)
Q Consensus 86 ------f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~ 157 (1217)
+...+..++++|+.||.+|+++|++. +++ ++++||.++|+.... .... .+ .+++.
T Consensus 70 ~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~~~~~p~~~~---~~------------~~Ee~ 132 (298)
T PLN02778 70 RPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEYDDAHPLGSG---IG------------FKEED 132 (298)
T ss_pred CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCCCCCCCcccC---CC------------CCcCC
Confidence 22456689999999999999999985 665 566777777654210 0000 00 00110
Q ss_pred ccccccccCCCCC-ChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEee
Q psy13944 158 LTVLNDILIKPMP-NTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQ 236 (1217)
Q Consensus 158 ~~~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g 236 (1217)
....| |.|+.||+++|+++..+. +..++|+++++|+... .+..++..+..+......+
T Consensus 133 --------~p~~~~s~Yg~sK~~~E~~~~~y~---~~~~lr~~~~~~~~~~----------~~~~fi~~~~~~~~~~~~~ 191 (298)
T PLN02778 133 --------TPNFTGSFYSKTKAMVEELLKNYE---NVCTLRVRMPISSDLS----------NPRNFITKITRYEKVVNIP 191 (298)
T ss_pred --------CCCCCCCchHHHHHHHHHHHHHhh---ccEEeeecccCCcccc----------cHHHHHHHHHcCCCeeEcC
Confidence 01112 689999999999998875 4678999887775311 1123555555554322221
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVN 315 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~ 315 (1217)
.+++||+|+++|++.++.. .. ++.||++++ +++..|+++
T Consensus 192 -----~s~~yv~D~v~al~~~l~~-~~----------------------------------~g~yNigs~~~iS~~el~~ 231 (298)
T PLN02778 192 -----NSMTILDELLPISIEMAKR-NL----------------------------------TGIYNFTNPGVVSHNEILE 231 (298)
T ss_pred -----CCCEEHHHHHHHHHHHHhC-CC----------------------------------CCeEEeCCCCcccHHHHHH
Confidence 3799999999999987642 11 348999988 899999999
Q ss_pred HHHHhhchh
Q psy13944 316 YIKQNIKEK 324 (1217)
Q Consensus 316 ~ia~~~g~~ 324 (1217)
.+++.+|.+
T Consensus 232 ~i~~~~~~~ 240 (298)
T PLN02778 232 MYRDYIDPS 240 (298)
T ss_pred HHHHHhCCC
Confidence 999999853
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-14 Score=161.17 Aligned_cols=222 Identities=17% Similarity=0.164 Sum_probs=154.0
Q ss_pred ccCCCCCCcccHHHHHHHHhcC----------hhHHHhhhc---Ccc--cCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD----------DAFDRLRKE---NAN--FTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~----------~vfd~Lr~~---~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
+||+.+--|..+.++|.+.--. .+|+.-++- .+. ....+.++.||++|. +.+..+++
T Consensus 3 VTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~------~~l~~~~~~~ 76 (293)
T PF02719_consen 3 VTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDK------ERLNRIFEEY 76 (293)
T ss_dssp EETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHH------HHHHHHTT--
T ss_pred EEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCH------HHHHHHHhhc
Confidence 6889999999999999774221 334322221 121 111345679999998 88999998
Q ss_pred CccEEEEcCccCC---cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 73 DVNIVFHVAATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 73 ~VDiViH~AA~v~---f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
++|+|||+||.-+ ....+.+++++||.||.+++++|.+. ++++||++||--+.-
T Consensus 77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~---------------------- 133 (293)
T PF02719_consen 77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVN---------------------- 133 (293)
T ss_dssp T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS----------------------
T ss_pred CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCC----------------------
Confidence 8999999999853 24567889999999999999999995 899999999953210
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcC-----CCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMD-----KLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~-----gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
..|.||.||.+||+++..+.. +..++++|.++|.|+..+-+| .+..
T Consensus 134 -------------------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip----------~F~~ 184 (293)
T PF02719_consen 134 -------------------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIP----------LFKK 184 (293)
T ss_dssp ---------------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHH----------HHHH
T ss_pred -------------------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHH----------HHHH
Confidence 027899999999999999872 468999999999998654333 4455
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN 304 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~ 304 (1217)
.+..|...++ .+++..|=|+-++++|+.++.|+..... |++|-.-
T Consensus 185 Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~~----------------------------------geifvl~ 229 (293)
T PF02719_consen 185 QIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAKG----------------------------------GEIFVLD 229 (293)
T ss_dssp HHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH--T----------------------------------TEEEEE-
T ss_pred HHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCCC----------------------------------CcEEEec
Confidence 6667755554 4678999999999999999988765443 6788888
Q ss_pred CC-ccCchHHHHHHHHhhchh
Q psy13944 305 HG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 305 sg-~~s~~el~~~ia~~~g~~ 324 (1217)
-| ++.+.|+++.+.+..|..
T Consensus 230 mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 230 MGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp --TCEECCCHHHHHHHHTT-E
T ss_pred CCCCcCHHHHHHHHHhhcccc
Confidence 87 999999999999888764
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.8e-14 Score=155.07 Aligned_cols=219 Identities=17% Similarity=0.093 Sum_probs=153.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiViH~AA~v~ 85 (1217)
+-.+|+.+.-|.++.+.+. -...+...-+ -..|++++ +.+.+++++ .|+|||+||.+.
T Consensus 3 iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~------------~~~Ditd~------~~v~~~i~~~~PDvVIn~AAyt~ 62 (281)
T COG1091 3 ILITGANGQLGTELRRALP--GEFEVIATDR------------AELDITDP------DAVLEVIRETRPDVVINAAAYTA 62 (281)
T ss_pred EEEEcCCChHHHHHHHHhC--CCceEEeccC------------ccccccCh------HHHHHHHHhhCCCEEEECccccc
Confidence 3467888888877777775 1111111101 12799988 777777764 599999999986
Q ss_pred cc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc-c-ccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 86 FD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-K-IEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 86 f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~-~-I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
.+ ...+.++.+|..|+.++.++|++... .+||+||-||+.... . -.|+-.+.|
T Consensus 63 vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga--~lVhiSTDyVFDG~~~~~Y~E~D~~~P-------------------- 120 (281)
T COG1091 63 VDKAESEPELAFAVNATGAENLARAAAEVGA--RLVHISTDYVFDGEKGGPYKETDTPNP-------------------- 120 (281)
T ss_pred cccccCCHHHHHHhHHHHHHHHHHHHHHhCC--eEEEeecceEecCCCCCCCCCCCCCCC--------------------
Confidence 64 34578999999999999999999643 899999999986543 1 222221211
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCc
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSN 240 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~ 240 (1217)
-|.||.||+++|+.+.+++ -...|+|.++|||.... |+ ...++.....|.... .-.++
T Consensus 121 ---------~nvYG~sKl~GE~~v~~~~--~~~~I~Rtswv~g~~g~-------nF--v~tml~la~~~~~l~--vv~Dq 178 (281)
T COG1091 121 ---------LNVYGRSKLAGEEAVRAAG--PRHLILRTSWVYGEYGN-------NF--VKTMLRLAKEGKELK--VVDDQ 178 (281)
T ss_pred ---------hhhhhHHHHHHHHHHHHhC--CCEEEEEeeeeecCCCC-------CH--HHHHHHHhhcCCceE--EECCe
Confidence 1679999999999999986 35899999999998532 22 223344444553332 33578
Q ss_pred eeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHH
Q psy13944 241 IVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQ 319 (1217)
Q Consensus 241 ~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~ 319 (1217)
....+++.|+|.++..++..... +..||+++. ..|+.|++..|.+
T Consensus 179 ~gsPt~~~dlA~~i~~ll~~~~~----------------------------------~~~yH~~~~g~~Swydfa~~I~~ 224 (281)
T COG1091 179 YGSPTYTEDLADAILELLEKEKE----------------------------------GGVYHLVNSGECSWYEFAKAIFE 224 (281)
T ss_pred eeCCccHHHHHHHHHHHHhcccc----------------------------------CcEEEEeCCCcccHHHHHHHHHH
Confidence 88999999999999988765443 224555444 5677889999988
Q ss_pred hhchh
Q psy13944 320 NIKEK 324 (1217)
Q Consensus 320 ~~g~~ 324 (1217)
..|.+
T Consensus 225 ~~~~~ 229 (281)
T COG1091 225 EAGVD 229 (281)
T ss_pred HhCCC
Confidence 87754
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.7e-14 Score=162.42 Aligned_cols=83 Identities=31% Similarity=0.401 Sum_probs=76.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.||++++.+||+++++..+..++|+|||+||.+++..++....++|+.||.+++++|.+. +.++|||+||.++
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v 139 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISV 139 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccc
Confidence 589999999999999999999999989999999999999988888888899999999999999986 6788999999998
Q ss_pred ecCc
Q psy13944 629 NCNI 632 (1217)
Q Consensus 629 ~g~~ 632 (1217)
++..
T Consensus 140 ~~~~ 143 (367)
T TIGR01746 140 LAAI 143 (367)
T ss_pred cCCc
Confidence 8753
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-14 Score=162.98 Aligned_cols=194 Identities=20% Similarity=0.109 Sum_probs=130.3
Q ss_pred EccCCCCCCCCCHHHHHHhcCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccc
Q psy13944 52 TADLQSDGLGLDEKEKKVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 126 (1217)
Q Consensus 52 ~GDl~d~~LGLs~edl~~L~~~--VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~ 126 (1217)
..|+++. +.+..+++. .|+||||||..+.+ ..++.++.+|+.++.+|.++|.+. + .++||+||.+|+
T Consensus 34 ~~dl~d~------~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VF 105 (286)
T PF04321_consen 34 DLDLTDP------EAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVF 105 (286)
T ss_dssp CS-TTSH------HHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS
T ss_pred hcCCCCH------HHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEE
Confidence 5677766 777777654 79999999987543 467789999999999999999985 3 499999999999
Q ss_pred ccccc--ccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccC
Q psy13944 127 CNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 127 g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~ 204 (1217)
+.... ..|+..+.| -|.||.||+.+|+.+++..+ ...|+|++.+||+
T Consensus 106 dG~~~~~y~E~d~~~P-----------------------------~~~YG~~K~~~E~~v~~~~~--~~~IlR~~~~~g~ 154 (286)
T PF04321_consen 106 DGDKGGPYTEDDPPNP-----------------------------LNVYGRSKLEGEQAVRAACP--NALILRTSWVYGP 154 (286)
T ss_dssp -SSTSSSB-TTS---------------------------------SSHHHHHHHHHHHHHHHH-S--SEEEEEE-SEESS
T ss_pred cCCcccccccCCCCCC-----------------------------CCHHHHHHHHHHHHHHHhcC--CEEEEecceeccc
Confidence 65421 233222211 16799999999999998765 7999999999998
Q ss_pred CCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccC
Q psy13944 205 VEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLID 284 (1217)
Q Consensus 205 ~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~n 284 (1217)
... +....++..+..|....+. .+.....++++|+|.+++.++.+... ..
T Consensus 155 ~~~---------~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~dlA~~i~~l~~~~~~----~~--------------- 204 (286)
T PF04321_consen 155 SGR---------NFLRWLLRRLRQGEPIKLF--DDQYRSPTYVDDLARVILELIEKNLS----GA--------------- 204 (286)
T ss_dssp SSS---------SHHHHHHHHHHCTSEEEEE--SSCEE--EEHHHHHHHHHHHHHHHHH-----G---------------
T ss_pred CCC---------chhhhHHHHHhcCCeeEee--CCceeCCEEHHHHHHHHHHHHHhccc----cc---------------
Confidence 332 1233455556666554444 47789999999999999999887554 10
Q ss_pred CCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhchhh
Q psy13944 285 PNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 285 p~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~~~ 325 (1217)
...++||+++. .+|..|+++.+++.+|.+.
T Consensus 205 -----------~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 205 -----------SPWGIYHLSGPERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp -----------GG-EEEE---BS-EEHHHHHHHHHHHHTHCT
T ss_pred -----------ccceeEEEecCcccCHHHHHHHHHHHhCCCC
Confidence 12567888777 7889999999999998763
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.1e-14 Score=162.76 Aligned_cols=218 Identities=13% Similarity=0.084 Sum_probs=155.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
-.||+.+.-|..+.++|.+.... .+..+-.+.... ...+++++.||++++ +++..+++++|+|||+++...
T Consensus 4 lVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~------~~l~~al~g~d~Vi~~~~~~~- 76 (317)
T CHL00194 4 LVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLP------ETLPPSFKGVTAIIDASTSRP- 76 (317)
T ss_pred EEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCH------HHHHHHHCCCCEEEECCCCCC-
Confidence 46899999999999998864221 112211101010 123689999999998 888888999999999986432
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccC
Q psy13944 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILI 166 (1217)
Q Consensus 87 ~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~ 166 (1217)
.......++|+.|+.+++++|++. ++++|||+||..+.. ++
T Consensus 77 -~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~---------~~---------------------------- 117 (317)
T CHL00194 77 -SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQ---------YP---------------------------- 117 (317)
T ss_pred -CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccc---------cC----------------------------
Confidence 223346789999999999999984 899999999954310 10
Q ss_pred CCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecccc
Q psy13944 167 KPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVP 246 (1217)
Q Consensus 167 ~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~Vp 246 (1217)
+..|..+|..+|+++.+ .+++++|+||+.+|+..-. .....+..+.. ....+++..+++|+
T Consensus 118 ---~~~~~~~K~~~e~~l~~--~~l~~tilRp~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~i~ 178 (317)
T CHL00194 118 ---YIPLMKLKSDIEQKLKK--SGIPYTIFRLAGFFQGLIS-------------QYAIPILEKQP-IWITNESTPISYID 178 (317)
T ss_pred ---CChHHHHHHHHHHHHHH--cCCCeEEEeecHHhhhhhh-------------hhhhhhccCCc-eEecCCCCccCccC
Confidence 13488999999999876 4799999999987753110 01111122222 22344567789999
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 247 GDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 247 VDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
|+|+|+++..++..+.. .++.||++++ .++..|+++.+++.+|.+
T Consensus 179 v~Dva~~~~~~l~~~~~---------------------------------~~~~~ni~g~~~~s~~el~~~~~~~~g~~ 224 (317)
T CHL00194 179 TQDAAKFCLKSLSLPET---------------------------------KNKTFPLVGPKSWNSSEIISLCEQLSGQK 224 (317)
T ss_pred HHHHHHHHHHHhcCccc---------------------------------cCcEEEecCCCccCHHHHHHHHHHHhCCC
Confidence 99999999888764333 2678999988 899999999999999875
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=155.64 Aligned_cols=230 Identities=10% Similarity=-0.013 Sum_probs=146.9
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEE-EEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCccc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVV-LTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDE 88 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~-V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e 88 (1217)
+||+.+.-|..+.+.|.+.. ..+....|...+ .+.... ...|+.. ......+.++|+|||+||......
T Consensus 3 VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~D~Vvh~a~~~~~~~ 72 (292)
T TIGR01777 3 ITGGTGFIGRALTQRLTKDG-HEVTILTRSPPA--GANTKWEGYKPWAP-------LAESEALEGADAVINLAGEPIADK 72 (292)
T ss_pred EEcccchhhHHHHHHHHHcC-CEEEEEeCCCCC--CCcccceeeecccc-------cchhhhcCCCCEEEECCCCCcccc
Confidence 58899999999999998742 222221122111 111110 0112211 223345678999999999764322
Q ss_pred -----CHHHHHHHHHHHHHHHHHHhHhcCCC--CeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 89 -----HFQTAFEINCKGTEKLLKMAEEMKNL--DSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 89 -----~l~~a~~vNV~GT~~LLelAk~~~~l--k~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
....+.++|+.|+.+++++|++. +. ..||++||+++||... .++|+..+.+
T Consensus 73 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~------------------- 132 (292)
T TIGR01777 73 RWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSEDRVFTEEDSPAG------------------- 132 (292)
T ss_pred cCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCCCCCcCcccCCCC-------------------
Confidence 23467889999999999999985 44 4677788878887532 1233211100
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCC
Q psy13944 160 VLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNT 238 (1217)
Q Consensus 160 ~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~ 238 (1217)
.+.|+..+...|+.+.... .+++++|+||+.|||+.. ++. ..++..+..+. ....+++
T Consensus 133 ----------~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~----~~~------~~~~~~~~~~~-~~~~g~~ 191 (292)
T TIGR01777 133 ----------DDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG----GAL------AKMLPPFRLGL-GGPLGSG 191 (292)
T ss_pred ----------CChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc----chh------HHHHHHHhcCc-ccccCCC
Confidence 1245667777787776544 689999999999999853 111 11111111111 1124678
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYI 317 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~i 317 (1217)
+..+++|+|||+|+++..++.++.. ...||++++ +++..|+++.+
T Consensus 192 ~~~~~~i~v~Dva~~i~~~l~~~~~----------------------------------~g~~~~~~~~~~s~~di~~~i 237 (292)
T TIGR01777 192 RQWFSWIHIEDLVQLILFALENASI----------------------------------SGPVNATAPEPVRNKEFAKAL 237 (292)
T ss_pred CcccccEeHHHHHHHHHHHhcCccc----------------------------------CCceEecCCCccCHHHHHHHH
Confidence 8999999999999999988754222 346899887 89999999999
Q ss_pred HHhhchh
Q psy13944 318 KQNIKEK 324 (1217)
Q Consensus 318 a~~~g~~ 324 (1217)
++..|.+
T Consensus 238 ~~~~g~~ 244 (292)
T TIGR01777 238 ARALHRP 244 (292)
T ss_pred HHHhCCC
Confidence 9998864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-14 Score=156.99 Aligned_cols=111 Identities=23% Similarity=0.211 Sum_probs=84.6
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHH---HHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQ---TAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~---~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
..+..++++|+.+..+- -...+.+++|.|+|.||....+.+.- ++...|+.||..||+.++..+++++|||+|
T Consensus 56 ~p~ykfv~~di~~~~~~----~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvS 131 (331)
T KOG0747|consen 56 SPNYKFVEGDIADADLV----LYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVS 131 (331)
T ss_pred CCCceEeeccccchHHH----HhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEec
Confidence 34678999999986420 11122357899999999876655543 567789999999999999999999999999
Q ss_pred cceeecCcc--c-ccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 625 TAYSNCNIK--K-IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 625 Ta~v~g~~~--~-I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
|-.|||+.. . ..|...+.| -|+|+.||++||.++++||
T Consensus 132 TdeVYGds~~~~~~~E~s~~nP-----------------------------tnpyAasKaAaE~~v~Sy~ 172 (331)
T KOG0747|consen 132 TDEVYGDSDEDAVVGEASLLNP-----------------------------TNPYAASKAAAEMLVRSYG 172 (331)
T ss_pred ccceecCccccccccccccCCC-----------------------------CCchHHHHHHHHHHHHHHh
Confidence 999999854 1 224333232 2569999999999999986
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-13 Score=161.23 Aligned_cols=220 Identities=16% Similarity=0.153 Sum_probs=173.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC----------hhH---HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD----------DAF---DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED- 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~----------~vf---d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~- 73 (1217)
.-+||+.+--|...-.|+.+.--. ..| ..+++..| ..++.++-||+.|. +.+..++++
T Consensus 253 vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~--~~~~~~~igdVrD~------~~~~~~~~~~ 324 (588)
T COG1086 253 VLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP--ELKLRFYIGDVRDR------DRVERAMEGH 324 (588)
T ss_pred EEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC--CcceEEEecccccH------HHHHHHHhcC
Confidence 348999999999999998874222 122 23333333 57899999999999 889999998
Q ss_pred -ccEEEEcCccCC---cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 74 -VNIVFHVAATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 74 -VDiViH~AA~v~---f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
+|+|||+||.-+ ...++.+++++||.||.|++++|.++ ++++||.+||--+ ++|
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKA----------V~P----------- 382 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKA----------VNP----------- 382 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcc----------cCC-----------
Confidence 999999999853 35677899999999999999999995 9999999999522 111
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcC-----CCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMD-----KLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~-----gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
.|.||.||.+||+++..+.. +-.++++|.|+|.|+..+-.| -+..
T Consensus 383 --------------------tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViP----------lFk~ 432 (588)
T COG1086 383 --------------------TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIP----------LFKK 432 (588)
T ss_pred --------------------chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHH----------HHHH
Confidence 27899999999999998862 478999999999999654332 3344
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN 304 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~ 304 (1217)
.+..|...++ .+++..|=|.-+.++|+.++.|+..... |++|-+-
T Consensus 433 QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~g----------------------------------Geifvld 477 (588)
T COG1086 433 QIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAKG----------------------------------GEIFVLD 477 (588)
T ss_pred HHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcCC----------------------------------CcEEEEc
Confidence 5566744443 5789999999999999999988765333 7888888
Q ss_pred CC-ccCchHHHHHHHHhhc
Q psy13944 305 HG-NYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 305 sg-~~s~~el~~~ia~~~g 322 (1217)
-| ++++.|+++.+.+..|
T Consensus 478 MGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 478 MGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred CCCCeEHHHHHHHHHHHhC
Confidence 87 9999999999988887
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=161.66 Aligned_cols=216 Identities=9% Similarity=0.027 Sum_probs=150.7
Q ss_pred CCCCCCcccHHHHHHHHhcC-hhHHHhhhcC-----------ccc-CCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEE
Q psy13944 12 GAKTCKHNSILWVAKDFFAD-DAFDRLRKEN-----------ANF-TERIVVLTADLQSDGLGLDEKEKKVLREDVNIVF 78 (1217)
Q Consensus 12 g~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~-----------p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiVi 78 (1217)
|+.+.-|..+.++|.+.... .++.+-.... .+. ...++++.||+.+. +..- ...++|+||
T Consensus 63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~------~~~~-~~~~~d~Vi 135 (378)
T PLN00016 63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADV------KSKV-AGAGFDVVY 135 (378)
T ss_pred CCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHH------Hhhh-ccCCccEEE
Confidence 88888999999999874221 1122111000 011 12488999998762 2221 125789999
Q ss_pred EcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcc
Q psy13944 79 HVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHT 156 (1217)
Q Consensus 79 H~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~ 156 (1217)
|+++. ++.++.+++++|++ .++++|||+||+++|+.... ..|..
T Consensus 136 ~~~~~-------------~~~~~~~ll~aa~~-~gvkr~V~~SS~~vyg~~~~~p~~E~~-------------------- 181 (378)
T PLN00016 136 DNNGK-------------DLDEVEPVADWAKS-PGLKQFLFCSSAGVYKKSDEPPHVEGD-------------------- 181 (378)
T ss_pred eCCCC-------------CHHHHHHHHHHHHH-cCCCEEEEEccHhhcCCCCCCCCCCCC--------------------
Confidence 99763 24578899999998 48999999999999986321 11100
Q ss_pred cccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEee
Q psy13944 157 ELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQ 236 (1217)
Q Consensus 157 ~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g 236 (1217)
..+++. +|..+|+++++ .+++++|+||+.+||+.... .....++..+..|....+++
T Consensus 182 ------------~~~p~~-sK~~~E~~l~~--~~l~~~ilRp~~vyG~~~~~--------~~~~~~~~~~~~~~~i~~~g 238 (378)
T PLN00016 182 ------------AVKPKA-GHLEVEAYLQK--LGVNWTSFRPQYIYGPGNNK--------DCEEWFFDRLVRGRPVPIPG 238 (378)
T ss_pred ------------cCCCcc-hHHHHHHHHHH--cCCCeEEEeceeEECCCCCC--------chHHHHHHHHHcCCceeecC
Confidence 001122 89999999876 47999999999999996422 01122344555665556678
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVN 315 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~ 315 (1217)
++++.++++|++|+|++++.++.++.. .++.||++++ .++..|+++
T Consensus 239 ~g~~~~~~i~v~Dva~ai~~~l~~~~~---------------------------------~~~~yni~~~~~~s~~el~~ 285 (378)
T PLN00016 239 SGIQLTQLGHVKDLASMFALVVGNPKA---------------------------------AGQIFNIVSDRAVTFDGMAK 285 (378)
T ss_pred CCCeeeceecHHHHHHHHHHHhcCccc---------------------------------cCCEEEecCCCccCHHHHHH
Confidence 889999999999999999988865333 2578999988 899999999
Q ss_pred HHHHhhchh
Q psy13944 316 YIKQNIKEK 324 (1217)
Q Consensus 316 ~ia~~~g~~ 324 (1217)
.+++.+|.+
T Consensus 286 ~i~~~~g~~ 294 (378)
T PLN00016 286 ACAKAAGFP 294 (378)
T ss_pred HHHHHhCCC
Confidence 999999875
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-13 Score=162.76 Aligned_cols=220 Identities=12% Similarity=0.097 Sum_probs=161.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhc---------CcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKE---------NANFTERIVVLTADLQSDGLGLDEKEKKVLRE----D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~---------~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----~ 73 (1217)
.-++|+.+.-|..+.++|.+.... .++.+-... ......+++++.||++++ +++..+++ +
T Consensus 63 VLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~------~~l~~~~~~~~~~ 136 (390)
T PLN02657 63 VLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA------DSLRKVLFSEGDP 136 (390)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH------HHHHHHHHHhCCC
Confidence 458999999999999999763221 112211100 011234789999999998 88887776 5
Q ss_pred ccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcC
Q psy13944 74 VNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153 (1217)
Q Consensus 74 VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l 153 (1217)
+|+||||+|.... ......++|+.++.+++++|++. ++++||++||.+++++
T Consensus 137 ~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~p------------------------- 188 (390)
T PLN02657 137 VDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQKP------------------------- 188 (390)
T ss_pred CcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccCc-------------------------
Confidence 9999999986321 12245678999999999999984 7899999999876321
Q ss_pred CcccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeE
Q psy13944 154 SHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRT 233 (1217)
Q Consensus 154 ~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~ 233 (1217)
.+.|..+|..+|+.+.....+++.+|+||+.+||+. .+++..+..|....
T Consensus 189 ----------------~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~--------------~~~~~~~~~g~~~~ 238 (390)
T PLN02657 189 ----------------LLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSL--------------GGQVEIVKDGGPYV 238 (390)
T ss_pred ----------------chHHHHHHHHHHHHHHhccCCCCEEEEccHHHhccc--------------HHHHHhhccCCceE
Confidence 024889999999998764478999999999999742 12233445566656
Q ss_pred EeeCCCcee-ccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccC-C-ccCc
Q psy13944 234 VYQNTSNIV-DMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINH-G-NYDT 310 (1217)
Q Consensus 234 i~g~~~~~~-D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~s-g-~~s~ 310 (1217)
+.|+++..+ ++|+++|+|.+++.++..+.. .++.|||++ + .++.
T Consensus 239 ~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~---------------------------------~~~~~~Iggp~~~~S~ 285 (390)
T PLN02657 239 MFGDGKLCACKPISEADLASFIADCVLDESK---------------------------------INKVLPIGGPGKALTP 285 (390)
T ss_pred EecCCcccccCceeHHHHHHHHHHHHhCccc---------------------------------cCCEEEcCCCCcccCH
Confidence 778887655 679999999999888764332 257899986 4 7899
Q ss_pred hHHHHHHHHhhchh
Q psy13944 311 TNHVNYIKQNIKEK 324 (1217)
Q Consensus 311 ~el~~~ia~~~g~~ 324 (1217)
.|+++.+.+.+|.+
T Consensus 286 ~Eia~~l~~~lG~~ 299 (390)
T PLN02657 286 LEQGEMLFRILGKE 299 (390)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999875
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.2e-13 Score=156.84 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=78.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCC---cEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNL---DSF 620 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~l---k~f 620 (1217)
.+++++.||++|.+ .+..+++ ++|+|||+||...... ......++|+.||.+|+++|++. ++ ++|
T Consensus 55 ~~~~~~~~Dl~d~~------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~ 127 (343)
T TIGR01472 55 ARMKLHYGDLTDSS------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKF 127 (343)
T ss_pred cceeEEEeccCCHH------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeE
Confidence 45899999999853 5666666 4699999999765332 23456788999999999999986 44 489
Q ss_pred EEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 621 IYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 621 V~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+||+.+||... +++|+....| .+.|+.||..+|.++..|
T Consensus 128 v~~SS~~vyg~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~ 170 (343)
T TIGR01472 128 YQASTSELYGKVQEIPQNETTPFYP-----------------------------RSPYAAAKLYAHWITVNY 170 (343)
T ss_pred EEeccHHhhCCCCCCCCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 9999999998643 3444421111 246999999988888665
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3e-13 Score=157.47 Aligned_cols=107 Identities=21% Similarity=0.183 Sum_probs=79.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhc--------C
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEM--------K 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~--------~ 615 (1217)
.+++++.+|+++++ +++.+++ ++|+|||+||.+... +.....+++|+.||.+++++|++. +
T Consensus 51 ~~~~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~ 124 (355)
T PRK10217 51 ERFAFEKVDICDRA------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKK 124 (355)
T ss_pred CceEEEECCCcChH------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhccccccc
Confidence 36889999999854 5666666 489999999976543 234578899999999999999863 3
Q ss_pred CCcEEEEEccceeecCcc----cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 616 NLDSFIYVSTAYSNCNIK----KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~----~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++++|||+||..+||... +++|.....| .+.|+.||.++|.++..|
T Consensus 125 ~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p-----------------------------~s~Y~~sK~~~e~~~~~~ 174 (355)
T PRK10217 125 SAFRFHHISTDEVYGDLHSTDDFFTETTPYAP-----------------------------SSPYSASKASSDHLVRAW 174 (355)
T ss_pred CceEEEEecchhhcCCCCCCCCCcCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 567999999999988532 3455421111 246999999988888554
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.3e-13 Score=156.50 Aligned_cols=76 Identities=18% Similarity=0.132 Sum_probs=62.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.||+++.. .+..+++++|+||||||.... .....+.+..|+.||.+|+++|++. + ++|||+||
T Consensus 65 ~~~~~~~~Dl~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS 136 (386)
T PLN02427 65 GRIQFHRINIKHDS------RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFST 136 (386)
T ss_pred CCeEEEEcCCCChH------HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEee
Confidence 46999999999853 577788899999999996542 2333456678999999999999986 4 79999999
Q ss_pred ceeecCc
Q psy13944 626 AYSNCNI 632 (1217)
Q Consensus 626 a~v~g~~ 632 (1217)
+++||..
T Consensus 137 ~~vYg~~ 143 (386)
T PLN02427 137 CEVYGKT 143 (386)
T ss_pred eeeeCCC
Confidence 9999864
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.6e-13 Score=153.95 Aligned_cols=113 Identities=12% Similarity=0.188 Sum_probs=79.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCcccc---chhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~---f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.+|++++. +.+..+++++|+|||+||... ........+++|+.||.+|+++|++. + ++|||+||
T Consensus 46 ~~~~~~~~Dl~~~~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS 118 (347)
T PRK11908 46 PRMHFFEGDITINK-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPST 118 (347)
T ss_pred CCeEEEeCCCCCCH-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEec
Confidence 35899999998432 346667789999999999643 23445567899999999999999986 4 69999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+.+||... ++.|+..+.... + .....+.|+.||.++|.++..|
T Consensus 119 ~~vyg~~~~~~~~ee~~~~~~~--------------------~--~~~p~~~Y~~sK~~~e~~~~~~ 163 (347)
T PRK11908 119 SEVYGMCPDEEFDPEASPLVYG--------------------P--INKPRWIYACSKQLMDRVIWAY 163 (347)
T ss_pred ceeeccCCCcCcCccccccccC--------------------c--CCCccchHHHHHHHHHHHHHHH
Confidence 99998643 233321110000 0 1112246999999988888554
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-13 Score=162.43 Aligned_cols=120 Identities=18% Similarity=0.033 Sum_probs=78.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchhc------HHHHHHHHHHHHHHHHHHHHhcCCCc-EE
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDEH------FQTAFEINCKGTEKLLKMAEEMKNLD-SF 620 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~~------~~~~~~~NV~GT~nLLelA~~~~~lk-~f 620 (1217)
+++++.|||+|++ .+..+++ ++|+|||+||......+ ....+++|+.||.+||++|++. +++ +|
T Consensus 114 ~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~ 186 (442)
T PLN02572 114 EIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHL 186 (442)
T ss_pred cceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccE
Confidence 5889999999853 5666665 58999999987442211 2345689999999999999987 564 89
Q ss_pred EEEccceeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 621 IYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 621 V~vSTa~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
||+||+.+||... +++|...+. +. ...+...+. ...-.|.|+.||.++|.++..|.
T Consensus 187 V~~SS~~vYG~~~~~~~E~~i~~--~~------------~~~e~~~~~-~~~P~s~Yg~SK~a~E~l~~~~~ 243 (442)
T PLN02572 187 VKLGTMGEYGTPNIDIEEGYITI--TH------------NGRTDTLPY-PKQASSFYHLSKVHDSHNIAFTC 243 (442)
T ss_pred EEEecceecCCCCCCCccccccc--cc------------ccccccccC-CCCCCCcchhHHHHHHHHHHHHH
Confidence 9999999998642 344431100 00 000000000 01112569999999888886653
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.1e-13 Score=160.41 Aligned_cols=105 Identities=16% Similarity=0.236 Sum_probs=75.8
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
+++++.+|+.++. +.++|+||||||.... .......+++|+.||.+|+++|++. +. +|||+||+
T Consensus 169 ~~~~~~~Di~~~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~ 235 (436)
T PLN02166 169 RFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTS 235 (436)
T ss_pred ceEEEECcccccc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcH
Confidence 5788999997753 2479999999996542 3345578899999999999999987 44 89999999
Q ss_pred eeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 627 YSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 627 ~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+|||+.. +++|..+... + + . .-.+.|+.||..+|.+++.|.
T Consensus 236 ~VYg~~~~~p~~E~~~~~~-~--------------------p--~-~p~s~Yg~SK~~aE~~~~~y~ 278 (436)
T PLN02166 236 EVYGDPLEHPQKETYWGNV-N--------------------P--I-GERSCYDEGKRTAETLAMDYH 278 (436)
T ss_pred HHhCCCCCCCCCccccccC-C--------------------C--C-CCCCchHHHHHHHHHHHHHHH
Confidence 9998643 4455422100 0 0 0 012469999999888886653
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=157.16 Aligned_cols=105 Identities=15% Similarity=0.244 Sum_probs=75.2
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCcccc---chhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~---f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
+++++.+|+.++. +.++|+||||||... ........+++|+.||.+||++|++. +. +|||+||+
T Consensus 168 ~~~~i~~D~~~~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~ 234 (442)
T PLN02206 168 NFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTS 234 (442)
T ss_pred ceEEEECCccChh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECCh
Confidence 5788899987642 247999999999654 22345578899999999999999987 54 89999999
Q ss_pred eeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 627 YSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 627 ~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
++||+.. +..|..+... + + . ...+.|+.||.++|.+++.|.
T Consensus 235 ~VYg~~~~~p~~E~~~~~~-~--------------------P--~-~~~s~Y~~SK~~aE~~~~~y~ 277 (442)
T PLN02206 235 EVYGDPLQHPQVETYWGNV-N--------------------P--I-GVRSCYDEGKRTAETLTMDYH 277 (442)
T ss_pred HHhCCCCCCCCCccccccC-C--------------------C--C-CccchHHHHHHHHHHHHHHHH
Confidence 9998643 3444422100 0 0 0 012469999999888886653
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.1e-13 Score=180.81 Aligned_cols=117 Identities=19% Similarity=0.255 Sum_probs=89.2
Q ss_pred ccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchh
Q psy13944 512 SLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDE 591 (1217)
Q Consensus 512 GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~ 591 (1217)
..++||+.|..+.....+++... +...........++++++.||++++.|||+++.+..+..++|+|||+||.+++..
T Consensus 999 ~~~V~~l~R~~~~~~~~~~l~~~--~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~ 1076 (1389)
T TIGR03443 999 NFKVFAHVRAKSEEAGLERLRKT--GTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVY 1076 (1389)
T ss_pred CcEEEEEECcCChHHHHHHHHHH--HHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCcc
Confidence 36888888765433222221111 0000001122345899999999999999999999999899999999999999988
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecC
Q psy13944 592 HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCN 631 (1217)
Q Consensus 592 ~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~ 631 (1217)
++......|+.||.++|++|++. ++++|+|+||+.+++.
T Consensus 1077 ~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~ 1115 (1389)
T TIGR03443 1077 PYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDT 1115 (1389)
T ss_pred CHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCc
Confidence 88888788999999999999987 6889999999999874
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.9e-12 Score=150.59 Aligned_cols=78 Identities=28% Similarity=0.260 Sum_probs=61.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhc--------C
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEM--------K 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~--------~ 615 (1217)
.+++++.+|++|.+ ++..+++ ++|+|||+||.+... ...+..+++|+.||.+++++|++. +
T Consensus 50 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~ 123 (352)
T PRK10084 50 ERYVFEHADICDRA------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKK 123 (352)
T ss_pred CceEEEEecCCCHH------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccc
Confidence 35788999999853 5666664 489999999976532 234578999999999999999863 2
Q ss_pred CCcEEEEEccceeecCc
Q psy13944 616 NLDSFIYVSTAYSNCNI 632 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~ 632 (1217)
++++|||+||.++||..
T Consensus 124 ~~~~~i~~SS~~vyg~~ 140 (352)
T PRK10084 124 NAFRFHHISTDEVYGDL 140 (352)
T ss_pred cceeEEEecchhhcCCC
Confidence 46789999999999863
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-12 Score=162.93 Aligned_cols=78 Identities=23% Similarity=0.241 Sum_probs=63.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh--cCccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR--EDVNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~--~~vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.||+++++ .+..+. .++|+|||+||....+.. .....++|+.||.+|+++|++.+.+++|||+
T Consensus 57 ~~v~~~~~Dl~d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~ 130 (668)
T PLN02260 57 PNFKFVKGDIASAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV 130 (668)
T ss_pred CCeEEEECCCCChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 46899999999864 244333 579999999998765443 3467889999999999999987558999999
Q ss_pred ccceeecCc
Q psy13944 624 STAYSNCNI 632 (1217)
Q Consensus 624 STa~v~g~~ 632 (1217)
||+.+||..
T Consensus 131 SS~~vyg~~ 139 (668)
T PLN02260 131 STDEVYGET 139 (668)
T ss_pred cchHHhCCC
Confidence 999999864
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-12 Score=164.24 Aligned_cols=195 Identities=14% Similarity=0.093 Sum_probs=142.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFD 87 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~ 87 (1217)
-.||+.+.-|..+.++|.+.... ..+++ ........++.++.+|++++ +++..+++++|+|||+|+....
T Consensus 4 LVTGATGfIGs~La~~Ll~~G~~Vv~l~R--~~~~~~~~~v~~v~gDL~D~------~~l~~al~~vD~VVHlAa~~~~- 74 (854)
T PRK05865 4 AVTGASGVLGRGLTARLLSQGHEVVGIAR--HRPDSWPSSADFIAADIRDA------TAVESAMTGADVVAHCAWVRGR- 74 (854)
T ss_pred EEECCCCHHHHHHHHHHHHCcCEEEEEEC--CchhhcccCceEEEeeCCCH------HHHHHHHhCCCEEEECCCcccc-
Confidence 46889999999999999764222 11221 11111224688999999998 8888888999999999986531
Q ss_pred cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCC
Q psy13944 88 EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIK 167 (1217)
Q Consensus 88 e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~ 167 (1217)
..++|+.||.+++++|++. ++++|||+||..
T Consensus 75 -----~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~------------------------------------------- 105 (854)
T PRK05865 75 -----NDHINIDGTANVLKAMAET-GTGRIVFTSSGH------------------------------------------- 105 (854)
T ss_pred -----hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH-------------------------------------------
Confidence 4689999999999999984 788999999831
Q ss_pred CCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccH
Q psy13944 168 PMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPG 247 (1217)
Q Consensus 168 ~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpV 247 (1217)
|..+|+++.+ .+++++|+||++|||+.. +. ++..+. .......|++...+|||||
T Consensus 106 ---------K~aaE~ll~~--~gl~~vILRp~~VYGP~~---~~----------~i~~ll-~~~v~~~G~~~~~~dfIhV 160 (854)
T PRK05865 106 ---------QPRVEQMLAD--CGLEWVAVRCALIFGRNV---DN----------WVQRLF-ALPVLPAGYADRVVQVVHS 160 (854)
T ss_pred ---------HHHHHHHHHH--cCCCEEEEEeceEeCCCh---HH----------HHHHHh-cCceeccCCCCceEeeeeH
Confidence 7888988865 489999999999999842 11 122211 1111123445667899999
Q ss_pred HHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHH
Q psy13944 248 DLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQ 319 (1217)
Q Consensus 248 DdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~ 319 (1217)
||+|++++.++..... .++.||++++ .++..|+++.+.+
T Consensus 161 dDVA~Ai~~aL~~~~~---------------------------------~ggvyNIgsg~~~Si~EIae~l~~ 200 (854)
T PRK05865 161 DDAQRLLVRALLDTVI---------------------------------DSGPVNLAAPGELTFRRIAAALGR 200 (854)
T ss_pred HHHHHHHHHHHhCCCc---------------------------------CCCeEEEECCCcccHHHHHHHHhh
Confidence 9999999888754322 1467999988 8999999887765
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.3e-12 Score=146.04 Aligned_cols=101 Identities=18% Similarity=0.076 Sum_probs=75.3
Q ss_pred EEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 553 VLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 553 ~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+.||++|++ .++++++ ++|+||||||....+. ....+.++|+.||.+|+++|++. +. +|||+||.+
T Consensus 35 ~~~~Dl~d~~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~ 106 (299)
T PRK09987 35 DYCGDFSNPE------GVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDY 106 (299)
T ss_pred cccCCCCCHH------HHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccce
Confidence 3468998753 5666665 5899999999876543 34567789999999999999997 54 799999999
Q ss_pred eecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 628 SNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 628 v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+... +++|+..+.| .|.|+.||..+|.+++.|
T Consensus 107 Vy~~~~~~p~~E~~~~~P-----------------------------~~~Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 107 VFPGTGDIPWQETDATAP-----------------------------LNVYGETKLAGEKALQEH 142 (299)
T ss_pred EECCCCCCCcCCCCCCCC-----------------------------CCHHHHHHHHHHHHHHHh
Confidence 998643 4555532222 146999999988888554
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.1e-12 Score=162.99 Aligned_cols=113 Identities=15% Similarity=0.182 Sum_probs=80.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.||++++. ..++.+++++|+|||+||.... .......+++|+.||.+++++|++. + ++|||+||
T Consensus 360 ~~~~~~~gDl~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS 432 (660)
T PRK08125 360 PRFHFVEGDISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPST 432 (660)
T ss_pred CceEEEeccccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcc
Confidence 36899999999853 2245566899999999997553 3344567899999999999999997 5 79999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++||... +++|+....+.. + ...-.+.|+.||.++|.++..|
T Consensus 433 ~~vyg~~~~~~~~E~~~~~~~~--------------------p--~~~p~s~Yg~sK~~~E~~~~~~ 477 (660)
T PRK08125 433 SEVYGMCTDKYFDEDTSNLIVG--------------------P--INKQRWIYSVSKQLLDRVIWAY 477 (660)
T ss_pred hhhcCCCCCCCcCccccccccC--------------------C--CCCCccchHHHHHHHHHHHHHH
Confidence 99998632 355553211000 0 0011136999999988888665
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.1e-12 Score=148.24 Aligned_cols=116 Identities=27% Similarity=0.320 Sum_probs=81.6
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch-h-cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD-E-HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~-~-~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
+++++.||+++++ ++..++.++|+|||+||...+. . +....+++|+.||.+|+++|++..++++|||+||+.
T Consensus 60 ~~~~~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~ 133 (338)
T PLN00198 60 DLKIFGADLTDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAA 133 (338)
T ss_pred ceEEEEcCCCChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecce
Confidence 5889999999864 5677778999999999976543 2 233567899999999999998865688999999999
Q ss_pred eecCcc------cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 628 SNCNIK------KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 628 v~g~~~------~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+|+... +++|+.... ... .+ .. ....+.|+.||.++|.++..|.
T Consensus 134 ~~g~~~~~~~~~~~~E~~~~~----~~~-----------~~---~~--~~p~~~Y~~sK~~~E~~~~~~~ 183 (338)
T PLN00198 134 AVSINKLSGTGLVMNEKNWTD----VEF-----------LT---SE--KPPTWGYPASKTLAEKAAWKFA 183 (338)
T ss_pred eeeccCCCCCCceeccccCCc----hhh-----------hh---hc--CCccchhHHHHHHHHHHHHHHH
Confidence 887431 344432110 000 00 00 0112359999999999987664
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.6e-12 Score=142.17 Aligned_cols=107 Identities=21% Similarity=0.162 Sum_probs=78.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.+|+++++ ++..++++ +|+|||+||.+..+ +..+..+++|+.|+.+++++|++...-.++||+
T Consensus 50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 123 (317)
T TIGR01181 50 PRYRFVKGDIGDRE------LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHI 123 (317)
T ss_pred CCcEEEEcCCcCHH------HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 36888999999854 67777776 89999999976543 334567899999999999999875222379999
Q ss_pred ccceeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||..+||... ++.|..... -.+.|+.||+.+|.+++.|
T Consensus 124 Ss~~v~g~~~~~~~~~e~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 164 (317)
T TIGR01181 124 STDEVYGDLEKGDAFTETTPLA-----------------------------PSSPYSASKAASDHLVRAY 164 (317)
T ss_pred eccceeCCCCCCCCcCCCCCCC-----------------------------CCCchHHHHHHHHHHHHHH
Confidence 9999998643 233331111 1246999999988888543
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.4e-12 Score=145.22 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=78.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCc-----
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLD----- 618 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk----- 618 (1217)
.+++++.+|+++.. ++..+++ ++|+|||+||..... ......+++|+.||.+|+++|++. +++
T Consensus 60 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~ 132 (340)
T PLN02653 60 ARMKLHYGDLSDAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQI 132 (340)
T ss_pred CceEEEEecCCCHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccce
Confidence 46899999999853 4666655 469999999975433 233466789999999999999987 443
Q ss_pred EEEEEccceeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 619 SFIYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 619 ~fV~vSTa~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+|||+||+.+||... +++|+....| .+.|+.||+++|.++++|
T Consensus 133 ~~v~~Ss~~vyg~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~ 176 (340)
T PLN02653 133 KYYQAGSSEMYGSTPPPQSETTPFHP-----------------------------RSPYAVAKVAAHWYTVNY 176 (340)
T ss_pred eEEEeccHHHhCCCCCCCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 899999999998743 3444421111 246999999988888665
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.2e-12 Score=144.27 Aligned_cols=84 Identities=25% Similarity=0.272 Sum_probs=62.1
Q ss_pred CccEEEEcCccccch-hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc--cccccccCCCCChhHHHHH
Q psy13944 576 DVNIVFHVAATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQI 652 (1217)
Q Consensus 576 ~vdvVfH~AA~v~f~-~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l 652 (1217)
++|+||||||..... ......++.|+.||.+||++|++. +. +|||+||+++||+.. +++|..+..|
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p--------- 136 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDFIEEREYEKP--------- 136 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCCCccCCCCCC---------
Confidence 689999999854322 123457899999999999999987 55 699999999998643 3444322111
Q ss_pred HhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 653 INSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 653 ~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+.|+.||.++|.+++.|
T Consensus 137 --------------------~~~Y~~sK~~~E~~~~~~ 154 (308)
T PRK11150 137 --------------------LNVYGYSKFLFDEYVRQI 154 (308)
T ss_pred --------------------CCHHHHHHHHHHHHHHHH
Confidence 246999999988888654
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-11 Score=142.37 Aligned_cols=114 Identities=21% Similarity=0.269 Sum_probs=81.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.+|+++++ +++.+++++|+|||+||..... +.....+++|+.||.+++++|.+..+.++||++||
T Consensus 56 ~~~~~~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS 129 (325)
T PLN02989 56 ERLKLFKADLLDEG------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSS 129 (325)
T ss_pred CceEEEeCCCCCch------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecc
Confidence 46899999999865 5777788999999999975432 23457789999999999999987545789999999
Q ss_pred ceeecCcc-------cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 626 AYSNCNIK-------KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 626 a~v~g~~~-------~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
..+++... +++|+....|. . .....+.|+.||.++|.++..|.
T Consensus 130 ~~~~~~~~~~~~~~~~~~E~~~~~p~---~--------------------~~~~~~~Y~~sK~~~E~~~~~~~ 179 (325)
T PLN02989 130 MAAVLAPETKLGPNDVVDETFFTNPS---F--------------------AEERKQWYVLSKTLAEDAAWRFA 179 (325)
T ss_pred hhheecCCccCCCCCccCcCCCCchh---H--------------------hcccccchHHHHHHHHHHHHHHH
Confidence 87764321 24454322110 0 01112569999999888886653
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.8e-12 Score=146.83 Aligned_cols=75 Identities=20% Similarity=0.172 Sum_probs=59.7
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCcccc---ch-hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVK---FD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~---f~-~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
++++.+|+++. +.+..+..++|+|||+||.+. +. .........|+.||.+|+++|++. ++++|||+||+
T Consensus 66 ~~~~~~Dl~d~------~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~ 138 (370)
T PLN02695 66 HEFHLVDLRVM------ENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSA 138 (370)
T ss_pred ceEEECCCCCH------HHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCch
Confidence 57788999874 356666778999999999753 21 223345678999999999999987 78999999999
Q ss_pred eeecCc
Q psy13944 627 YSNCNI 632 (1217)
Q Consensus 627 ~v~g~~ 632 (1217)
.+||..
T Consensus 139 ~vYg~~ 144 (370)
T PLN02695 139 CIYPEF 144 (370)
T ss_pred hhcCCc
Confidence 999864
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.4e-12 Score=141.33 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=73.4
Q ss_pred EcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccc----hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 555 TADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKF----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 555 ~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f----~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+|+++. ++++.+++ ++|+||||||..+. .......++.|+.||.+|+++|++. ++++|||+||+++
T Consensus 32 ~~Dl~~~------~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~v 104 (306)
T PLN02725 32 ELDLTRQ------ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCI 104 (306)
T ss_pred cCCCCCH------HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceee
Confidence 5788774 35666655 57999999997542 2334467889999999999999997 7899999999999
Q ss_pred ecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCC-C-hhHHHHHHHHHHhhhh
Q psy13944 629 NCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMP-N-TYTLSKNAWYIICLSF 690 (1217)
Q Consensus 629 ~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~p-N-tYt~SK~lAE~lv~~y 690 (1217)
||... +++|+.... ....| + .|+.||.++|.+++.|
T Consensus 105 yg~~~~~~~~E~~~~~--------------------------~~~~p~~~~Y~~sK~~~e~~~~~~ 144 (306)
T PLN02725 105 YPKFAPQPIPETALLT--------------------------GPPEPTNEWYAIAKIAGIKMCQAY 144 (306)
T ss_pred cCCCCCCCCCHHHhcc--------------------------CCCCCCcchHHHHHHHHHHHHHHH
Confidence 98532 444442110 00112 2 4999999988887554
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.34 E-value=6e-12 Score=144.27 Aligned_cols=113 Identities=18% Similarity=0.254 Sum_probs=80.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc--hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF--DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f--~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
.+++++.||++++. .++.+++++|+|||+||.+.. ..+....+++|+.||.+++++|++..++++|||+||+
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~ 128 (322)
T PLN02662 55 ERLHLFKANLLEEG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSM 128 (322)
T ss_pred CceEEEeccccCcc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCH
Confidence 47899999999865 577788899999999997643 2333467899999999999999876568899999997
Q ss_pred e--eecCcc-----cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 627 Y--SNCNIK-----KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 627 ~--v~g~~~-----~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. +|+... +++|+....| . ......+.|+.||.++|.++..|
T Consensus 129 ~~~~y~~~~~~~~~~~~E~~~~~p---~--------------------~~~~~~~~Y~~sK~~~E~~~~~~ 176 (322)
T PLN02662 129 AAVAYNGKPLTPDVVVDETWFSDP---A--------------------FCEESKLWYVLSKTLAEEAAWKF 176 (322)
T ss_pred HHhcCCCcCCCCCCcCCcccCCCh---h--------------------HhhcccchHHHHHHHHHHHHHHH
Confidence 5 354321 2444321111 0 01112346999999988888655
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-11 Score=139.58 Aligned_cols=115 Identities=23% Similarity=0.335 Sum_probs=86.5
Q ss_pred CcCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhc--HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 547 FTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEH--FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 547 ~~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~--~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
..+++.++.+||+|++ .++..+++||.|||+|+.+.|+.. .++.++..|.||.|+|+.|++.+.++|||++|
T Consensus 55 a~~~l~l~~aDL~d~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TS 128 (327)
T KOG1502|consen 55 AKERLKLFKADLLDEG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTS 128 (327)
T ss_pred CcccceEEeccccccc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEec
Confidence 3567999999999986 688889999999999999988655 55889999999999999999987799999999
Q ss_pred cceeecCc-c------cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNI-K------KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~-~------~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+.+.... . .++|+.+.++ +... -.. +-|..||.+||.-...|
T Consensus 129 S~aAv~~~~~~~~~~~vvdE~~wsd~----~~~~------------~~~-------~~Y~~sK~lAEkaAw~f 178 (327)
T KOG1502|consen 129 STAAVRYNGPNIGENSVVDEESWSDL----DFCR------------CKK-------LWYALSKTLAEKAAWEF 178 (327)
T ss_pred cHHHhccCCcCCCCCcccccccCCcH----HHHH------------hhH-------HHHHHHHHHHHHHHHHH
Confidence 96554322 1 4566543221 1110 000 46999999977777443
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=134.43 Aligned_cols=105 Identities=27% Similarity=0.303 Sum_probs=81.7
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCc--cEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDV--NIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~v--dvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
+++++.+|+++. +.++.++++. |+|||+||.... .......++.|+.++.++|++|++. ++++|||+|
T Consensus 43 ~~~~~~~dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~s 115 (236)
T PF01370_consen 43 NVEFVIGDLTDK------EQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLS 115 (236)
T ss_dssp TEEEEESETTSH------HHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred eEEEEEeecccc------ccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 799999999974 4677777655 999999997632 1345578889999999999999998 669999999
Q ss_pred cceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+.+|+... +++|+....|. +.|+.+|..+|.+++.|
T Consensus 116 S~~~y~~~~~~~~~e~~~~~~~-----------------------------~~Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 116 SASVYGDPDGEPIDEDSPINPL-----------------------------SPYGASKRAAEELLRDY 154 (236)
T ss_dssp EGGGGTSSSSSSBETTSGCCHS-----------------------------SHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccc-----------------------------ccccccccccccccccc
Confidence 999998763 45565433221 24999999988888654
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.4e-11 Score=141.63 Aligned_cols=110 Identities=21% Similarity=0.231 Sum_probs=80.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc-e
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA-Y 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa-~ 627 (1217)
.+++++.+|++++. ++..++.++|+|||+||... ......+++|+.||.+++++|++. ++++|||+||+ .
T Consensus 60 ~~~~~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~a 130 (342)
T PLN02214 60 ERLILCKADLQDYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGA 130 (342)
T ss_pred CcEEEEecCcCChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecccee
Confidence 46889999999854 57777889999999999753 445678899999999999999986 78899999995 5
Q ss_pred eecCcc-----cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 628 SNCNIK-----KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 628 v~g~~~-----~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+||... .++|+...+. + . .....+.|+.||.+||.++..|
T Consensus 131 vyg~~~~~~~~~~~E~~~~~~-~--------------------~--~~~p~~~Y~~sK~~aE~~~~~~ 175 (342)
T PLN02214 131 VYMDPNRDPEAVVDESCWSDL-D--------------------F--CKNTKNWYCYGKMVAEQAAWET 175 (342)
T ss_pred eeccCCCCCCcccCcccCCCh-h--------------------h--ccccccHHHHHHHHHHHHHHHH
Confidence 776422 2444421100 0 0 0111246999999998888665
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.1e-11 Score=138.43 Aligned_cols=106 Identities=21% Similarity=0.228 Sum_probs=79.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.+|++++. ++..+++ ++|+|||+||..... ......+++|+.|+.+++++|++. ++++|||+
T Consensus 58 ~~~~~~~~D~~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ 130 (352)
T PLN02240 58 DNLVFHKVDLRDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFS 130 (352)
T ss_pred ccceEEecCcCCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence 45889999998853 5666554 689999999975432 234568899999999999999986 78899999
Q ss_pred ccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+.+||... +++|+.... ..+.|+.||..+|.+++.|
T Consensus 131 Ss~~vyg~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 170 (352)
T PLN02240 131 SSATVYGQPEEVPCTEEFPLS-----------------------------ATNPYGRTKLFIEEICRDI 170 (352)
T ss_pred ccHHHhCCCCCCCCCCCCCCC-----------------------------CCCHHHHHHHHHHHHHHHH
Confidence 9998887532 455542111 1246999999988888654
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.8e-11 Score=137.34 Aligned_cols=106 Identities=21% Similarity=0.201 Sum_probs=77.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
++.++.+|++++ +++..++++ +|+|||+||...... .....+++|+.|+.+++++|++...+++||++|
T Consensus 53 ~~~~~~~Dl~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~S 126 (349)
T TIGR02622 53 KIEDHFGDIRDA------AKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVT 126 (349)
T ss_pred CceEEEccCCCH------HHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 577899999985 356666664 699999999654332 344678999999999999999864378999999
Q ss_pred cceeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+.+|+... +++|.....| .+.|+.||.++|.++..|
T Consensus 127 S~~vyg~~~~~~~~~e~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~ 166 (349)
T TIGR02622 127 SDKCYRNDEWVWGYRETDPLGG-----------------------------HDPYSSSKACAELVIASY 166 (349)
T ss_pred chhhhCCCCCCCCCccCCCCCC-----------------------------CCcchhHHHHHHHHHHHH
Confidence 999998632 2333321111 246999999988888654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.29 E-value=2e-11 Score=140.45 Aligned_cols=114 Identities=25% Similarity=0.299 Sum_probs=80.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch--hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~--~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
.+++++.+|++++. .++.+++++|+|||+||.+.+. .+....+++|+.||.++|+.|++.+++++|||+||+
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~ 129 (322)
T PLN02986 56 ERLKLFKADLLEES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSST 129 (322)
T ss_pred CceEEEecCCCCcc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecch
Confidence 46899999999865 5778888999999999976432 333457889999999999999986578999999997
Q ss_pred eee--cCcc-----cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 627 YSN--CNIK-----KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 627 ~v~--g~~~-----~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.++ +... .++|+....| .......+.|+.||.+||.++..|.
T Consensus 130 ~~~~~~~~~~~~~~~~~E~~~~~p-----------------------~~~~~~~~~Y~~sK~~aE~~~~~~~ 178 (322)
T PLN02986 130 AAVLFRQPPIEANDVVDETFFSDP-----------------------SLCRETKNWYPLSKILAENAAWEFA 178 (322)
T ss_pred hheecCCccCCCCCCcCcccCCCh-----------------------HHhhccccchHHHHHHHHHHHHHHH
Confidence 654 3211 2333321111 0011123569999999988886653
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-10 Score=134.45 Aligned_cols=106 Identities=17% Similarity=0.201 Sum_probs=78.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
++.++.+|+++++ .+..++. ++|+|||+||..... ......+++|+.|+.+|+++|++. ++++||++|
T Consensus 51 ~~~~~~~Dl~d~~------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S 123 (338)
T PRK10675 51 HPTFVEGDIRNEA------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSS 123 (338)
T ss_pred CceEEEccCCCHH------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence 4678899999853 4555554 589999999976543 233467899999999999999987 788999999
Q ss_pred cceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+.+||... +++|+... +.....|+.||..+|.+++.|
T Consensus 124 s~~~yg~~~~~~~~E~~~~----------------------------~~p~~~Y~~sK~~~E~~~~~~ 163 (338)
T PRK10675 124 SATVYGDQPKIPYVESFPT----------------------------GTPQSPYGKSKLMVEQILTDL 163 (338)
T ss_pred cHHhhCCCCCCccccccCC----------------------------CCCCChhHHHHHHHHHHHHHH
Confidence 999988543 34444211 011246999999988888654
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.3e-11 Score=139.56 Aligned_cols=117 Identities=18% Similarity=0.219 Sum_probs=80.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch--hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~--~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
.+++++.||++++. .++.+++++|+|||+||..... .+....+++|+.||.+||++|++...+++|||+||+
T Consensus 56 ~~~~~v~~Dl~d~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~ 129 (351)
T PLN02650 56 TRLTLWKADLAVEG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSA 129 (351)
T ss_pred CceEEEEecCCChh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecch
Confidence 36899999999864 4777788999999999976432 233467899999999999999986447899999998
Q ss_pred eeecCcc---c-ccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 627 YSNCNIK---K-IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 627 ~v~g~~~---~-I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+++... + ++|... .+. +. ... ...-.+.|+.||.++|.++..|.
T Consensus 130 ~~~~~~~~~~~~~~E~~~-~~~---~~---------------~~~-~~~~~~~Y~~sK~~~E~~~~~~~ 178 (351)
T PLN02650 130 GTVNVEEHQKPVYDEDCW-SDL---DF---------------CRR-KKMTGWMYFVSKTLAEKAAWKYA 178 (351)
T ss_pred hhcccCCCCCCccCcccC-Cch---hh---------------hhc-cccccchHHHHHHHHHHHHHHHH
Confidence 7765421 1 233311 000 00 000 00111469999999998886653
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-11 Score=135.20 Aligned_cols=104 Identities=17% Similarity=0.285 Sum_probs=78.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccc---cchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATV---KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v---~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
..++.+.-|+..+ ++.+||.|||+||.. .+..+.-..+.+|+.||.++|.+|++. + +||+|+||
T Consensus 75 ~~fel~~hdv~~p-----------l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aST 141 (350)
T KOG1429|consen 75 PNFELIRHDVVEP-----------LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLAST 141 (350)
T ss_pred cceeEEEeechhH-----------HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeec
Confidence 4577777777654 567899999999964 466666688899999999999999987 3 79999999
Q ss_pred ceeecCcc--ccccccc--CCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 626 AYSNCNIK--KIEEKFY--EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y--~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+.|||+.. +..|... -.|.+|. .+|...|.+||.||.+|.
T Consensus 142 seVYgdp~~hpq~e~ywg~vnpigpr--------------------------~cydegKr~aE~L~~~y~ 185 (350)
T KOG1429|consen 142 SEVYGDPLVHPQVETYWGNVNPIGPR--------------------------SCYDEGKRVAETLCYAYH 185 (350)
T ss_pred ccccCCcccCCCccccccccCcCCch--------------------------hhhhHHHHHHHHHHHHhh
Confidence 99999854 3333321 1222221 269999999999997775
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-10 Score=132.94 Aligned_cols=102 Identities=20% Similarity=0.211 Sum_probs=71.8
Q ss_pred EEEcccCCCCCCCCHHHHHHHh----cCccEEEEcCccccch-hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 553 VLTADLQSDGLGLDEKAKEVLR----EDVNIVFHVAATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 553 ~V~GDltd~~LGLs~~~~~~L~----~~vdvVfH~AA~v~f~-~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+.+|+++++ .++.+. .++|+|||+||..... .......++|+.||.+|+++|++. +. +|||+||++
T Consensus 45 ~~~~d~~~~~------~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~ 116 (314)
T TIGR02197 45 VIADYIDKED------FLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAA 116 (314)
T ss_pred eeeccCcchh------HHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHH
Confidence 4567877654 345554 4799999999975432 234567889999999999999986 55 799999999
Q ss_pred eecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 628 SNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 628 v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+|++.. +..|+.. .....+.|+.||+.+|.+++.|
T Consensus 117 vy~~~~~~~~e~~~----------------------------~~~p~~~Y~~sK~~~e~~~~~~ 152 (314)
T TIGR02197 117 TYGDGEAGFREGRE----------------------------LERPLNVYGYSKFLFDQYVRRR 152 (314)
T ss_pred hcCCCCCCcccccC----------------------------cCCCCCHHHHHHHHHHHHHHHH
Confidence 998643 2222210 0011346999999988888554
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-10 Score=132.75 Aligned_cols=107 Identities=21% Similarity=0.268 Sum_probs=80.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCc-cEEEEcCccccchhcH----HHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDV-NIVFHVAATVKFDEHF----QTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~v-dvVfH~AA~v~f~~~~----~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
..+.++.+|+++.+ ....+..++ |+|||+||........ .....+|+.||.+++++|++. ++++|||.
T Consensus 42 ~~~~~~~~d~~~~~------~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ 114 (314)
T COG0451 42 SGVEFVVLDLTDRD------LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFA 114 (314)
T ss_pred cccceeeecccchH------HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEe
Confidence 35788999999863 456666777 9999999988755543 358899999999999999994 89999998
Q ss_pred ccceeecCc--c-cccccc-cCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 624 STAYSNCNI--K-KIEEKF-YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 624 STa~v~g~~--~-~I~E~~-y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
||.++++.. . +++|+. .+.| .+.|+.||.++|.+++.|.
T Consensus 115 ss~~~~~~~~~~~~~~E~~~~~~p-----------------------------~~~Yg~sK~~~E~~~~~~~ 157 (314)
T COG0451 115 SSVSVVYGDPPPLPIDEDLGPPRP-----------------------------LNPYGVSKLAAEQLLRAYA 157 (314)
T ss_pred CCCceECCCCCCCCcccccCCCCC-----------------------------CCHHHHHHHHHHHHHHHHH
Confidence 888877753 1 455552 1111 0159999999888886553
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.3e-11 Score=138.35 Aligned_cols=117 Identities=23% Similarity=0.304 Sum_probs=79.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchh-----cHHH-----HHHHHHHHHHHHHHHHHhcCCCc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDE-----HFQT-----AFEINCKGTEKLLKMAEEMKNLD 618 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~-----~~~~-----~~~~NV~GT~nLLelA~~~~~lk 618 (1217)
.+++++.+|++++. ++..++.++|+|||+||...... +... .++.|+.||.+||++|++..+++
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~ 131 (353)
T PLN02896 58 DRLRLFRADLQEEG------SFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVK 131 (353)
T ss_pred CeEEEEECCCCCHH------HHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCcc
Confidence 46889999999853 57777788999999999765332 2332 34556799999999998864588
Q ss_pred EEEEEccceeecCcc-------cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 619 SFIYVSTAYSNCNIK-------KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 619 ~fV~vSTa~v~g~~~-------~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+||++||+.+||... +++|+. +.|.+ .... .......|+.||.++|.++..|.
T Consensus 132 ~~v~~SS~~vyg~~~~~~~~~~~~~E~~-~~p~~-----------------~~~~--~~~~~~~Y~~sK~~~E~~~~~~~ 191 (353)
T PLN02896 132 RVVFTSSISTLTAKDSNGRWRAVVDETC-QTPID-----------------HVWN--TKASGWVYVLSKLLTEEAAFKYA 191 (353)
T ss_pred EEEEEechhhccccccCCCCCCccCccc-CCcHH-----------------Hhhc--cCCCCccHHHHHHHHHHHHHHHH
Confidence 999999999997421 234431 11100 0000 01111369999999999997653
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.2e-11 Score=139.38 Aligned_cols=106 Identities=24% Similarity=0.297 Sum_probs=82.1
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccc--cchhc-HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATV--KFDEH-FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v--~f~~~-~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
..+++.+.||+.+.. ++.....++ .|+||||.. +|... .+...++||.||.++++.|++. +++++||+|
T Consensus 54 ~~~v~~~~~D~~~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtS 125 (361)
T KOG1430|consen 54 SGRVTVILGDLLDAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTS 125 (361)
T ss_pred CCceeEEecchhhhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEec
Confidence 467999999999865 577777889 888888853 45553 6678899999999999999998 899999999
Q ss_pred cceeecCccc---ccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 625 TAYSNCNIKK---IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 625 Ta~v~g~~~~---I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
|++|.....+ -+|.. |.| ..+++.|+.||+.||.+|+
T Consensus 126 s~~Vvf~g~~~~n~~E~~-p~p--------------------------~~~~d~Y~~sKa~aE~~Vl 165 (361)
T KOG1430|consen 126 SAYVVFGGEPIINGDESL-PYP--------------------------LKHIDPYGESKALAEKLVL 165 (361)
T ss_pred CceEEeCCeecccCCCCC-CCc--------------------------cccccccchHHHHHHHHHH
Confidence 9999876553 22322 111 2355679999999888884
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-10 Score=123.38 Aligned_cols=234 Identities=16% Similarity=0.136 Sum_probs=164.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEE---EccCCCCCCCCCHHHHHHhcCC--ccEEEEcCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVL---TADLQSDGLGLDEKEKKVLRED--VNIVFHVAA 82 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V---~GDl~d~~LGLs~edl~~L~~~--VDiViH~AA 82 (1217)
.-.||.++-.|+.++..+++.... .++..++ ..|+++. ++.+.+++. ...|||+||
T Consensus 4 IlVtGg~GLVGsAi~~vv~~q~~~-------------~e~wvf~~skd~DLt~~------a~t~~lF~~ekPthVIhlAA 64 (315)
T KOG1431|consen 4 ILVTGGTGLVGSAIVKVVQEQGFD-------------DENWVFIGSKDADLTNL------ADTRALFESEKPTHVIHLAA 64 (315)
T ss_pred EEEecCCchHHHHHHHHHHhcCCC-------------CcceEEeccccccccch------HHHHHHHhccCCceeeehHh
Confidence 346788888888888777663221 1122222 5688876 788888764 589999999
Q ss_pred cCCc---cc-CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcc
Q psy13944 83 TVKF---DE-HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHT 156 (1217)
Q Consensus 83 ~v~f---~e-~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~ 156 (1217)
.++- +. ..-+++..|+.---|+|..|.+. +++++|++.|...+.+.. .|+|.....
T Consensus 65 mVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~yPIdEtmvh~----------------- 126 (315)
T KOG1431|consen 65 MVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTSYPIDETMVHN----------------- 126 (315)
T ss_pred hhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCCCCCCHHHhcc-----------------
Confidence 9842 11 22358999999999999999995 889999998888877643 233321100
Q ss_pred cccccccccCCCCC--ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHH----hc
Q psy13944 157 ELTVLNDILIKPMP--NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV----GL 228 (1217)
Q Consensus 157 ~~~~~tp~~~~~~P--NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~----~~ 228 (1217)
....| -.|++.|.++.-.-+.|+ .|...+.+-|.+||||.+.-.| .+.....+++..+ ..
T Consensus 127 ---------gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnp---e~sHVlPali~r~h~ak~~ 194 (315)
T KOG1431|consen 127 ---------GPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNP---ENSHVLPALIHRFHEAKRN 194 (315)
T ss_pred ---------CCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCc---ccccchHHHHHHHHHHHhc
Confidence 01122 259999988887777777 7889999999999999765433 2233344555443 34
Q ss_pred Cc-eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 229 GI-MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 229 G~-l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
|. ...++|.|.-.|.|+|+||+|++++..+..-.. -+..+++.|
T Consensus 195 gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~----------------------------------vEpiils~ge 240 (315)
T KOG1431|consen 195 GTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEG----------------------------------VEPIILSVGE 240 (315)
T ss_pred CCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcC----------------------------------ccceEeccCc
Confidence 44 557899999999999999999999988765333 133456665
Q ss_pred --ccCchHHHHHHHHhhchh
Q psy13944 307 --NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 --~~s~~el~~~ia~~~g~~ 324 (1217)
.++++|+++.+.++.+-+
T Consensus 241 ~~EVtI~e~aeaV~ea~~F~ 260 (315)
T KOG1431|consen 241 SDEVTIREAAEAVVEAVDFT 260 (315)
T ss_pred cceeEHHHHHHHHHHHhCCC
Confidence 689999999999998754
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.9e-10 Score=127.17 Aligned_cols=96 Identities=24% Similarity=0.182 Sum_probs=69.8
Q ss_pred EcccCCCCCCCCHHHHHHHhcCc--cEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 555 TADLQSDGLGLDEKAKEVLREDV--NIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 555 ~GDltd~~LGLs~~~~~~L~~~v--dvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
.+|+.++ +++..+++++ |+|||+||...... .....+++|+.||.+++++|++. +. +|||+||+++|
T Consensus 33 ~~d~~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy 104 (287)
T TIGR01214 33 QLDLTDP------EALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVF 104 (287)
T ss_pred ccCCCCH------HHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeee
Confidence 3677653 4667666655 99999999765432 34467899999999999999987 44 89999999999
Q ss_pred cCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 630 CNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 630 g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
+... +++|...+. ..+.|+.||..+|.++
T Consensus 105 ~~~~~~~~~E~~~~~-----------------------------~~~~Y~~~K~~~E~~~ 135 (287)
T TIGR01214 105 DGEGKRPYREDDATN-----------------------------PLNVYGQSKLAGEQAI 135 (287)
T ss_pred cCCCCCCCCCCCCCC-----------------------------CcchhhHHHHHHHHHH
Confidence 7632 344442111 1246999999977777
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.6e-10 Score=142.39 Aligned_cols=198 Identities=12% Similarity=0.083 Sum_probs=133.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
.-+||+.+.-|..+.++|.+.... .+.++... .....+++++.+|++++ . +..++.++|+|||+|+...
T Consensus 3 ILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~--~~~~~~ve~v~~Dl~d~------~-l~~al~~~D~VIHLAa~~~- 72 (699)
T PRK12320 3 ILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH--DALDPRVDYVCASLRNP------V-LQELAGEADAVIHLAPVDT- 72 (699)
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh--hcccCCceEEEccCCCH------H-HHHHhcCCCEEEEcCccCc-
Confidence 347899999999999999874322 22332111 11234688999999986 3 5667788999999998642
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccC
Q psy13944 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILI 166 (1217)
Q Consensus 87 ~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~ 166 (1217)
.. ...+|+.|+.+++++|++. ++ ++||+||++ |..
T Consensus 73 ~~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~--G~~------------------------------------- 107 (699)
T PRK12320 73 SA----PGGVGITGLAHVANAAARA-GA-RLLFVSQAA--GRP------------------------------------- 107 (699)
T ss_pred cc----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC--CCC-------------------------------------
Confidence 11 2358999999999999985 55 799999874 321
Q ss_pred CCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecccc
Q psy13944 167 KPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVP 246 (1217)
Q Consensus 167 ~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~Vp 246 (1217)
..|. .+|.++.. .++|++|+|++++||+...+. . ..++..+..... ......+||
T Consensus 108 ----~~~~----~aE~ll~~--~~~p~~ILR~~nVYGp~~~~~------~---~r~I~~~l~~~~------~~~pI~vIy 162 (699)
T PRK12320 108 ----ELYR----QAETLVST--GWAPSLVIRIAPPVGRQLDWM------V---CRTVATLLRSKV------SARPIRVLH 162 (699)
T ss_pred ----cccc----HHHHHHHh--cCCCEEEEeCceecCCCCccc------H---hHHHHHHHHHHH------cCCceEEEE
Confidence 0122 36777765 358999999999999854321 0 122222222111 122344699
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHh
Q psy13944 247 GDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQN 320 (1217)
Q Consensus 247 VDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~ 320 (1217)
|||+|++++.++... . +.+||||++ .++..|+++.+...
T Consensus 163 VdDvv~alv~al~~~-~----------------------------------~GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 163 LDDLVRFLVLALNTD-R----------------------------------NGVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred HHHHHHHHHHHHhCC-C----------------------------------CCEEEEeCCCeeEHHHHHHHHHHh
Confidence 999999998877531 1 238999999 89999988777643
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.1e-10 Score=128.90 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=58.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.++.++.+|++|+ +++..+++++|+|||+||.... .......+++|+.||.+++++|++. ++++||++||
T Consensus 53 ~~~~~v~~Dl~d~------~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS 125 (324)
T TIGR03589 53 PCLRFFIGDVRDK------ERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALST 125 (324)
T ss_pred CcEEEEEccCCCH------HHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeC
Confidence 4688999999985 4677778889999999996532 2234578899999999999999986 6889999999
Q ss_pred c
Q psy13944 626 A 626 (1217)
Q Consensus 626 a 626 (1217)
.
T Consensus 126 ~ 126 (324)
T TIGR03589 126 D 126 (324)
T ss_pred C
Confidence 5
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.3e-10 Score=123.69 Aligned_cols=226 Identities=13% Similarity=0.064 Sum_probs=143.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
.-.||+.+.-|..+.++|.+.-... + .+.+.+.......++.++.+|++++ +++..++ ..+|
T Consensus 5 vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 5 WFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDS------AAVRAVVDRAFAALGRID 78 (276)
T ss_pred EEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCH------HHHHHHHHHHHHHcCCCC
Confidence 3478898999999999998642221 1 1111111111234788999999998 6665544 3579
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+||..... +..+..+++|+.|+.++++++ ++ .+..+||++||...... .|
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~----------~~---- 143 (276)
T PRK06482 79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRR-QGGGRIVQVSSEGGQIA----------YP---- 143 (276)
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEEEEEcCcccccC----------CC----
Confidence 999999975432 224567889999999999997 33 35679999999643211 00
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEeccee---ccCCCCCCccccccc
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIV---MPVVEEPCPMWVKGM 216 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV---~G~~~eP~pGWidn~ 216 (1217)
.-+.|+.||+..|.+++.+. .+++++++||+.+ +|+.... .++....
T Consensus 144 ------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-~~~~~~~ 198 (276)
T PRK06482 144 ------------------------GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDR-GAPLDAY 198 (276)
T ss_pred ------------------------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccc-cCCCccc
Confidence 01469999999999887654 5899999999988 5443211 1111111
Q ss_pred c-hhH-HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhh
Q psy13944 217 N-GLT-AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESI 294 (1217)
Q Consensus 217 ~-g~~-~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~ 294 (1217)
. .+. .+...+..|. . .-+.+++|++++++.++.....
T Consensus 199 ~~~~~~~~~~~~~~~~---------~-~~~~d~~~~~~a~~~~~~~~~~------------------------------- 237 (276)
T PRK06482 199 DDTPVGDLRRALADGS---------F-AIPGDPQKMVQAMIASADQTPA------------------------------- 237 (276)
T ss_pred cchhhHHHHHHHhhcc---------C-CCCCCHHHHHHHHHHHHcCCCC-------------------------------
Confidence 0 111 1222222221 1 1135789999999988753322
Q ss_pred hhccceeeccCC-ccCchHHHHHHHHhhch
Q psy13944 295 KKLDVNYEINHG-NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 295 ~~~g~~YnI~sg-~~s~~el~~~ia~~~g~ 323 (1217)
+..|+++++ ..+..+++..+.+.++.
T Consensus 238 ---~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (276)
T PRK06482 238 ---PRRLTLGSDAYASIRAALSERLAALEA 264 (276)
T ss_pred ---CeEEecChHHHHHHHHHHHHHHHHHHH
Confidence 456999999 77777777766666554
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.8e-10 Score=123.81 Aligned_cols=241 Identities=12% Similarity=0.005 Sum_probs=172.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhh-------------cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRK-------------ENANFTERIVVLTADLQSDGLGLDEKEKKVLRED- 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~-------------~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~- 73 (1217)
+-+||.++..|.=+.+=|.+.. -.++...|+ ..-....+++++.||++|. ..+.++++.
T Consensus 5 ALITGITGQDGsYLa~lLLekG-Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~------~~l~r~l~~v 77 (345)
T COG1089 5 ALITGITGQDGSYLAELLLEKG-YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDS------SNLLRILEEV 77 (345)
T ss_pred EEEecccCCchHHHHHHHHhcC-cEEEEEeeccccCCcccceeccccccCCceeEEEeccccch------HHHHHHHHhc
Confidence 3467777777876666666521 122222222 1112234589999999998 778777775
Q ss_pred -ccEEEEcCccC----CcccCHHHHHHHHHHHHHHHHHHhHhcCC-CCeEEEEcCccccccccc--ccccccCCCCChHH
Q psy13944 74 -VNIVFHVAATV----KFDEHFQTAFEINCKGTEKLLKMAEEMKN-LDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIE 145 (1217)
Q Consensus 74 -VDiViH~AA~v----~f~e~l~~a~~vNV~GT~~LLelAk~~~~-lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~ 145 (1217)
.|.|+|+||.. +|+.|. ...+++..||.+|||+.+.... -.+|...||+..||.... .+|..+-.|
T Consensus 78 ~PdEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyP----- 151 (345)
T COG1089 78 QPDEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYP----- 151 (345)
T ss_pred CchhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCC-----
Confidence 49999999984 676664 4778899999999999987642 358999999999996542 334322111
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
-++|+.+|..|-.+...|+ +|+-.|.=+.++--+| ..|-.--..-.+..+
T Consensus 152 ------------------------rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP----~Rge~FVTRKIt~av 203 (345)
T COG1089 152 ------------------------RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESP----LRGETFVTRKITRAV 203 (345)
T ss_pred ------------------------CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCC----CCccceehHHHHHHH
Confidence 1679999999999988877 7887776666655444 334322223344556
Q ss_pred HHHhcCceeE-EeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceee
Q psy13944 224 VAVGLGIMRT-VYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYE 302 (1217)
Q Consensus 224 ~~~~~G~l~~-i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Yn 302 (1217)
..+..|.... ..|+.++.+||-|..|-|++|...+.+... ..|.
T Consensus 204 a~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~P-----------------------------------ddyV 248 (345)
T COG1089 204 ARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEEP-----------------------------------DDYV 248 (345)
T ss_pred HHHHccccceEEeccccccccccchHHHHHHHHHHHccCCC-----------------------------------CceE
Confidence 6667776654 468999999999999999999988775433 4699
Q ss_pred ccCC-ccCchHHHHHHHHhhchh
Q psy13944 303 INHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 303 I~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
|++| ..+.+|+++...+..|.+
T Consensus 249 iATg~t~sVrefv~~Af~~~g~~ 271 (345)
T COG1089 249 IATGETHSVREFVELAFEMVGID 271 (345)
T ss_pred EecCceeeHHHHHHHHHHHcCce
Confidence 9999 999999999999999854
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.4e-09 Score=122.25 Aligned_cols=105 Identities=23% Similarity=0.214 Sum_probs=77.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
+++++.+|+++++ +++.++. ++|+|||+||...... .....++.|+.|+.+++++|.+. ++++||++|
T Consensus 48 ~~~~~~~D~~~~~------~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~s 120 (328)
T TIGR01179 48 RVTFVEGDLRDRE------LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSS 120 (328)
T ss_pred ceEEEECCCCCHH------HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEec
Confidence 5888999999854 4555554 6999999999764432 23357789999999999999986 678999999
Q ss_pred cceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|.+++|... +++|+.... ..+.|+.+|+.+|.++..+
T Consensus 121 s~~~~g~~~~~~~~e~~~~~-----------------------------~~~~y~~sK~~~e~~~~~~ 159 (328)
T TIGR01179 121 SAAVYGEPSSIPISEDSPLG-----------------------------PINPYGRSKLMSERILRDL 159 (328)
T ss_pred chhhcCCCCCCCccccCCCC-----------------------------CCCchHHHHHHHHHHHHHH
Confidence 998887532 344442111 1246999999988888554
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.4e-09 Score=124.49 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=69.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccc------hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKF------DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFI 621 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f------~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV 621 (1217)
+|....+|+++.. .+...+. ++|+||||||.+.. ......++++|+.||.+|+++|++. +++ ++
T Consensus 35 ~V~~~~~~~~~~~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v 106 (298)
T PLN02778 35 DFHYGSGRLENRA------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LT 106 (298)
T ss_pred EEEEecCccCCHH------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EE
Confidence 3555566766532 2333333 68999999997642 2345678999999999999999997 675 56
Q ss_pred EEccceeecCcc--c------ccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCC-ChhHHHHHHHHHHhhhh
Q psy13944 622 YVSTAYSNCNIK--K------IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMP-NTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 622 ~vSTa~v~g~~~--~------I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~p-NtYt~SK~lAE~lv~~y 690 (1217)
|+||.++|+... + +.|+.. ...| |.|+.||.++|.+|+.|
T Consensus 107 ~~sS~~vy~~~~~~p~~~~~~~~Ee~~-----------------------------p~~~~s~Yg~sK~~~E~~~~~y 155 (298)
T PLN02778 107 NYATGCIFEYDDAHPLGSGIGFKEEDT-----------------------------PNFTGSFYSKTKAMVEELLKNY 155 (298)
T ss_pred EEecceEeCCCCCCCcccCCCCCcCCC-----------------------------CCCCCCchHHHHHHHHHHHHHh
Confidence 677777775421 1 222211 1112 67999999999988665
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.1e-10 Score=131.18 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=60.3
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
++.++.+|++++. ++..+++++|.|||+|+.+.... ......++|+.||.+++++|++..++++|||+||+
T Consensus 108 ~~~~v~~Dl~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~ 181 (367)
T PLN02686 108 GIWTVMANLTEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSL 181 (367)
T ss_pred ceEEEEcCCCCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccH
Confidence 5889999999854 57777888999999999764332 12345678999999999999986579999999996
Q ss_pred --eeecC
Q psy13944 627 --YSNCN 631 (1217)
Q Consensus 627 --~v~g~ 631 (1217)
.+||.
T Consensus 182 ~~~vyg~ 188 (367)
T PLN02686 182 LACVWRQ 188 (367)
T ss_pred HHhcccc
Confidence 46653
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.5e-09 Score=121.29 Aligned_cols=108 Identities=21% Similarity=0.259 Sum_probs=81.3
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc-hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f-~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
+++++.+|++++ +++.++++++|+|||+|+.... .......+++|+.|+.+++++|++. ++++||++||.++
T Consensus 44 ~~~~~~~D~~~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~ 116 (328)
T TIGR03466 44 DVEIVEGDLRDP------ASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVAT 116 (328)
T ss_pred CceEEEeeCCCH------HHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhh
Confidence 588999999985 3677788899999999986542 3455678899999999999999986 6889999999999
Q ss_pred ecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 629 NCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 629 ~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++... +++|.....| ....+.|+.||.++|.+++.|
T Consensus 117 ~~~~~~~~~~~e~~~~~~--------------------------~~~~~~Y~~sK~~~e~~~~~~ 155 (328)
T TIGR03466 117 LGVRGDGTPADETTPSSL--------------------------DDMIGHYKRSKFLAEQAALEM 155 (328)
T ss_pred cCcCCCCCCcCccCCCCc--------------------------ccccChHHHHHHHHHHHHHHH
Confidence 88521 3444422111 111246999999988888554
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.9e-09 Score=117.97 Aligned_cols=222 Identities=17% Similarity=0.201 Sum_probs=153.9
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAA 82 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA 82 (1217)
.=|+.+.-|.-+...|.++..+-+. +-.+-+.-.-+..+-+..-|+.|+ +.++...+..++||++-+
T Consensus 66 VFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~De------dSIr~vvk~sNVVINLIG 139 (391)
T KOG2865|consen 66 VFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDE------DSIRAVVKHSNVVINLIG 139 (391)
T ss_pred EecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCH------HHHHHHHHhCcEEEEeec
Confidence 3467777788888888776554221 111101112345677778888888 889999999999999998
Q ss_pred cCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccc
Q psy13944 83 TVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLN 162 (1217)
Q Consensus 83 ~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~t 162 (1217)
.---..+. .+.++|+.+.++|...|+++ ++++|||+|+...+-
T Consensus 140 rd~eTknf-~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv----------------------------------- 182 (391)
T KOG2865|consen 140 RDYETKNF-SFEDVNVHIAERLARICKEA-GVERFIHVSCLGANV----------------------------------- 182 (391)
T ss_pred cccccCCc-ccccccchHHHHHHHHHHhh-Chhheeehhhccccc-----------------------------------
Confidence 63111122 35689999999999999995 999999999975321
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee
Q psy13944 163 DILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV 242 (1217)
Q Consensus 163 p~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~ 242 (1217)
..|+-|-.+|+++|..++++.+ ..+|+||+.+||..+ .+-.+...++.- .|.++......+.+.
T Consensus 183 -----~s~Sr~LrsK~~gE~aVrdafP--eAtIirPa~iyG~eD--------rfln~ya~~~rk-~~~~pL~~~GekT~K 246 (391)
T KOG2865|consen 183 -----KSPSRMLRSKAAGEEAVRDAFP--EATIIRPADIYGTED--------RFLNYYASFWRK-FGFLPLIGKGEKTVK 246 (391)
T ss_pred -----cChHHHHHhhhhhHHHHHhhCC--cceeechhhhcccch--------hHHHHHHHHHHh-cCceeeecCCcceee
Confidence 1124589999999999999875 379999999999853 222222222221 233332222234566
Q ss_pred ccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhh
Q psy13944 243 DMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNI 321 (1217)
Q Consensus 243 D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~ 321 (1217)
.-|+|-|||.+|+.|+.++.+ .|.+|..... -|...|+++++-+..
T Consensus 247 ~PVyV~DVaa~IvnAvkDp~s---------------------------------~Gktye~vGP~~yql~eLvd~my~~~ 293 (391)
T KOG2865|consen 247 QPVYVVDVAAAIVNAVKDPDS---------------------------------MGKTYEFVGPDRYQLSELVDIMYDMA 293 (391)
T ss_pred ccEEEehHHHHHHHhccCccc---------------------------------cCceeeecCCchhhHHHHHHHHHHHH
Confidence 789999999999999888766 2666766655 789999999887766
Q ss_pred ch
Q psy13944 322 KE 323 (1217)
Q Consensus 322 g~ 323 (1217)
.+
T Consensus 294 ~~ 295 (391)
T KOG2865|consen 294 RE 295 (391)
T ss_pred hh
Confidence 54
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-09 Score=113.93 Aligned_cols=179 Identities=17% Similarity=0.202 Sum_probs=127.5
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCccc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDE 88 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e 88 (1217)
.+|+.+.-|..+.+.|.+-- .++.-..|+..+ ....+++++.||+.++ +++...++++|+|||+++....
T Consensus 3 V~GatG~vG~~l~~~L~~~~-~~V~~~~R~~~~~~~~~~~~~~~~d~~d~------~~~~~al~~~d~vi~~~~~~~~-- 73 (183)
T PF13460_consen 3 VFGATGFVGRALAKQLLRRG-HEVTALVRSPSKAEDSPGVEIIQGDLFDP------DSVKAALKGADAVIHAAGPPPK-- 73 (183)
T ss_dssp EETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGHHHCTTEEEEESCTTCH------HHHHHHHTTSSEEEECCHSTTT--
T ss_pred EECCCChHHHHHHHHHHHCC-CEEEEEecCchhcccccccccceeeehhh------hhhhhhhhhcchhhhhhhhhcc--
Confidence 35777777777888777643 222222222211 1167999999999998 8999999999999999976433
Q ss_pred CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCC
Q psy13944 89 HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKP 168 (1217)
Q Consensus 89 ~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~ 168 (1217)
...++.+++++|++. +++++|++||+.++...... ... . ...
T Consensus 74 --------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~---~~~---------------------~-----~~~ 115 (183)
T PF13460_consen 74 --------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGL---FSD---------------------E-----DKP 115 (183)
T ss_dssp --------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSE---EEG---------------------G-----TCG
T ss_pred --------ccccccccccccccc-ccccceeeeccccCCCCCcc---ccc---------------------c-----ccc
Confidence 278889999999995 89999999999988753321 000 0 001
Q ss_pred CCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHH
Q psy13944 169 MPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGD 248 (1217)
Q Consensus 169 ~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVD 248 (1217)
.+..|...|..+|+.+.+ .+++.+++||+.++|....+. ..+...+.....+|+++
T Consensus 116 ~~~~~~~~~~~~e~~~~~--~~~~~~ivrp~~~~~~~~~~~----------------------~~~~~~~~~~~~~i~~~ 171 (183)
T PF13460_consen 116 IFPEYARDKREAEEALRE--SGLNWTIVRPGWIYGNPSRSY----------------------RLIKEGGPQGVNFISRE 171 (183)
T ss_dssp GGHHHHHHHHHHHHHHHH--STSEEEEEEESEEEBTTSSSE----------------------EEESSTSTTSHCEEEHH
T ss_pred chhhhHHHHHHHHHHHHh--cCCCEEEEECcEeEeCCCcce----------------------eEEeccCCCCcCcCCHH
Confidence 114699999999999975 489999999999999853311 01111345566899999
Q ss_pred HHHHHHHHHHH
Q psy13944 249 LVVNILLAAAW 259 (1217)
Q Consensus 249 dVvnAii~aa~ 259 (1217)
|+|.+++.++.
T Consensus 172 DvA~~~~~~l~ 182 (183)
T PF13460_consen 172 DVAKAIVEALE 182 (183)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99999998875
|
... |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.2e-09 Score=121.44 Aligned_cols=206 Identities=11% Similarity=0.081 Sum_probs=136.8
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------CC-ccEEEEcC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ED-VNIVFHVA 81 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------~~-VDiViH~A 81 (1217)
-++|+.+.-|..+.++|.+.. .++.-..|.........++.+.+|+.|+ +.+..++ ++ +|.|||++
T Consensus 3 lVtGatG~iG~~vv~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~d~~d~------~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 3 LLTGGTGKTASRIARLLQAAS-VPFLVASRSSSSSAGPNEKHVKFDWLDE------DTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred EEEcCCChHHHHHHHHHHhCC-CcEEEEeCCCccccCCCCccccccCCCH------HHHHHHHhcccCcCCceeEEEEeC
Confidence 368999999999999987642 2222222222111234677889999998 8888777 56 99999998
Q ss_pred ccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 82 ATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 82 A~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
+... . ....+.+++++|++. ++++|||+||+.+... .+
T Consensus 76 ~~~~--~--------~~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~----------~~--------------------- 113 (285)
T TIGR03649 76 PPIP--D--------LAPPMIKFIDFARSK-GVRRFVLLSASIIEKG----------GP--------------------- 113 (285)
T ss_pred CCCC--C--------hhHHHHHHHHHHHHc-CCCEEEEeeccccCCC----------Cc---------------------
Confidence 7542 1 123456899999985 8999999999654211 00
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHH-hcCceeEEeeCCCc
Q psy13944 162 NDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV-GLGIMRTVYQNTSN 240 (1217)
Q Consensus 162 tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~-~~G~l~~i~g~~~~ 240 (1217)
.+...|+.+.+. .+++.+++||+.+++....+. + ...+ ..|. ...+.++.
T Consensus 114 --------------~~~~~~~~l~~~-~gi~~tilRp~~f~~~~~~~~--~----------~~~~~~~~~--~~~~~g~~ 164 (285)
T TIGR03649 114 --------------AMGQVHAHLDSL-GGVEYTVLRPTWFMENFSEEF--H----------VEAIRKENK--IYSATGDG 164 (285)
T ss_pred --------------hHHHHHHHHHhc-cCCCEEEEeccHHhhhhcccc--c----------ccccccCCe--EEecCCCC
Confidence 111234444332 489999999998886432110 0 0111 1232 23345788
Q ss_pred eeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHH
Q psy13944 241 IVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQ 319 (1217)
Q Consensus 241 ~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~ 319 (1217)
..++|+++|+++++..++..+.. .+..|++.++ .++..|+++.+.+
T Consensus 165 ~~~~v~~~Dva~~~~~~l~~~~~---------------------------------~~~~~~l~g~~~~s~~eia~~l~~ 211 (285)
T TIGR03649 165 KIPFVSADDIARVAYRALTDKVA---------------------------------PNTDYVVLGPELLTYDDVAEILSR 211 (285)
T ss_pred ccCcccHHHHHHHHHHHhcCCCc---------------------------------CCCeEEeeCCccCCHHHHHHHHHH
Confidence 89999999999999887765332 1456788776 8999999999999
Q ss_pred hhchhh
Q psy13944 320 NIKEKF 325 (1217)
Q Consensus 320 ~~g~~~ 325 (1217)
.+|++.
T Consensus 212 ~~g~~v 217 (285)
T TIGR03649 212 VLGRKI 217 (285)
T ss_pred HhCCce
Confidence 999864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.5e-09 Score=116.72 Aligned_cols=97 Identities=25% Similarity=0.226 Sum_probs=73.4
Q ss_pred cccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeec
Q psy13944 556 ADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNC 630 (1217)
Q Consensus 556 GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g 630 (1217)
.||++++ .+.+++.+ .|+|||+||.+.++.. .+.++.+|..|+.+|.++|++. +. ++||+||-||+.
T Consensus 34 ~Ditd~~------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-ga-~lVhiSTDyVFD 105 (281)
T COG1091 34 LDITDPD------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-GA-RLVHISTDYVFD 105 (281)
T ss_pred ccccChH------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-CC-eEEEeecceEec
Confidence 5777754 46666664 6999999998876533 3578999999999999999997 44 799999999985
Q ss_pred Ccc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 631 NIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 631 ~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
... +..|+-.+.|. |-||.||.++|..+++
T Consensus 106 G~~~~~Y~E~D~~~P~-----------------------------nvYG~sKl~GE~~v~~ 137 (281)
T COG1091 106 GEKGGPYKETDTPNPL-----------------------------NVYGRSKLAGEEAVRA 137 (281)
T ss_pred CCCCCCCCCCCCCCCh-----------------------------hhhhHHHHHHHHHHHH
Confidence 543 56666544443 3599999997666643
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.9e-09 Score=118.54 Aligned_cols=109 Identities=23% Similarity=0.266 Sum_probs=88.8
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccchhcHH---HHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFDEHFQ---TAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~~~~~---~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
.++|.+++|||+|. +.++++.+. .|.|+|+||.....++.+ .+...|+.||.+|||.|++. +++.+|+
T Consensus 53 ~~~v~f~~~Dl~D~------~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~ 125 (343)
T KOG1371|consen 53 GKSVFFVEGDLNDA------EALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVF 125 (343)
T ss_pred CCceEEEEeccCCH------HHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEE
Confidence 36899999999985 457888764 699999999988777766 57889999999999999998 5999999
Q ss_pred EccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 623 VSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 623 vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.||+.+||... +++|+.... .--|.|+.||.+.|.++..|.
T Consensus 126 sssatvYG~p~~ip~te~~~t~----------------------------~p~~pyg~tK~~iE~i~~d~~ 168 (343)
T KOG1371|consen 126 SSSATVYGLPTKVPITEEDPTD----------------------------QPTNPYGKTKKAIEEIIHDYN 168 (343)
T ss_pred ecceeeecCcceeeccCcCCCC----------------------------CCCCcchhhhHHHHHHHHhhh
Confidence 99999999876 677764221 112569999999888886654
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.6e-08 Score=115.40 Aligned_cols=91 Identities=25% Similarity=0.189 Sum_probs=60.1
Q ss_pred HHHHHHHhc--CccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc--cccccc
Q psy13944 567 EKAKEVLRE--DVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKF 639 (1217)
Q Consensus 567 ~~~~~~L~~--~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~--~I~E~~ 639 (1217)
.+.+..++. ..|+||||||..+.+. ..+.+.++|+.++.+|.++|++. +. ++||+||.+|++... +..|+.
T Consensus 40 ~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~~-~li~~STd~VFdG~~~~~y~E~d 117 (286)
T PF04321_consen 40 PEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-GA-RLIHISTDYVFDGDKGGPYTEDD 117 (286)
T ss_dssp HHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SSTSSSB-TTS
T ss_pred HHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-CC-cEEEeeccEEEcCCcccccccCC
Confidence 456666655 4799999999876553 55689999999999999999986 44 899999999996543 456664
Q ss_pred cCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 640 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 640 y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
.+.|. |.||.||+.+|..++
T Consensus 118 ~~~P~-----------------------------~~YG~~K~~~E~~v~ 137 (286)
T PF04321_consen 118 PPNPL-----------------------------NVYGRSKLEGEQAVR 137 (286)
T ss_dssp ----S-----------------------------SHHHHHHHHHHHHHH
T ss_pred CCCCC-----------------------------CHHHHHHHHHHHHHH
Confidence 43332 569999999777774
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.6e-09 Score=115.27 Aligned_cols=201 Identities=14% Similarity=0.101 Sum_probs=126.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+.-...+ .+.+.++......++.++.+|++++ +.++.+++
T Consensus 10 vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 10 AVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNE------DAVNAGIDKVAERFG 83 (262)
T ss_pred EEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 44889999999999999986322110 1111111111234578899999998 66554443
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHH----HHHHHHHh-HhcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKG----TEKLLKMA-EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~G----T~~LLelA-k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+|+..... +.++..+++|+.| +..+++++ +. .+.+++|++||.+.... .+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~~~~iv~~ss~~~~~~----------~~ 152 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD-DRGGVVIYMGSVHSHEA----------SP 152 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh-cCCcEEEEEcchhhcCC----------CC
Confidence 489999999975321 2244678899999 77777777 54 46789999999654211 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCC-Cccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEP-CPMWVK 214 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP-~pGWid 214 (1217)
..+.|+.||+..|.+++.++ .++.++++||+.++++.... .+....
T Consensus 153 ----------------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~ 204 (262)
T PRK13394 153 ----------------------------LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAK 204 (262)
T ss_pred ----------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhh
Confidence 01469999999998887654 57999999999999874211 110000
Q ss_pred ccc-hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 215 GMN-GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 215 n~~-g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
... .....+..+ ...+....++++++|++++++.++...
T Consensus 205 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~dva~a~~~l~~~~ 244 (262)
T PRK13394 205 ELGISEEEVVKKV--------MLGKTVDGVFTTVEDVAQTVLFLSSFP 244 (262)
T ss_pred ccCCChHHHHHHH--------HhcCCCCCCCCCHHHHHHHHHHHcCcc
Confidence 000 001111111 122345678999999999999887643
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.7e-08 Score=111.40 Aligned_cols=199 Identities=15% Similarity=0.117 Sum_probs=124.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHH-------hcCC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKV-------LRED 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~-------L~~~ 73 (1217)
-+||+.+.-|..+.++|.+.... .-.+.+.++......++.++.+|+.++ +++.. .+.+
T Consensus 5 lItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 5 LVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE------DEIADMIAAAAAEFGG 78 (255)
T ss_pred EEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH------HHHHHHHHHHHHhcCC
Confidence 36888888888888888763221 011111111111234688999999998 64433 3456
Q ss_pred ccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+|+.... + +.++..++.|+.|+..+++.+. + .+.++||++||...+... +
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~~~~~~v~~ss~~~~~~~----------~-- 145 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKK-QGWGRIINIASAHGLVAS----------P-- 145 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCeEEEEEcchhhcCCC----------C--
Confidence 8999999997532 1 1234678899999988888773 3 356899999997543321 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCC-CCc-cc-cc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEE-PCP-MW-VK 214 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~e-P~p-GW-id 214 (1217)
.-..|+.+|...|.+++.+. .+++++++||+.++++... .++ .+ ..
T Consensus 146 --------------------------~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~ 199 (255)
T TIGR01963 146 --------------------------FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTR 199 (255)
T ss_pred --------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhccc
Confidence 01369999999998886554 4899999999999887421 000 00 00
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.... ...+... ...+...+++++++|+|++++.++...
T Consensus 200 ~~~~-~~~~~~~--------~~~~~~~~~~~~~~d~a~~~~~~~~~~ 237 (255)
T TIGR01963 200 GIPE-EQVIREV--------MLPGQPTKRFVTVDEVAETALFLASDA 237 (255)
T ss_pred CCCc-hHHHHHH--------HHccCccccCcCHHHHHHHHHHHcCcc
Confidence 0000 0000000 112345678999999999999887653
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.1e-08 Score=110.27 Aligned_cols=202 Identities=15% Similarity=0.140 Sum_probs=127.6
Q ss_pred cccCC-CcccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-CCc
Q psy13944 3 QNRGK-LGHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-EDV 74 (1217)
Q Consensus 3 ~~~g~-~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-~~V 74 (1217)
|+.++ .-.+|+.+.-|..+.++|.+-. ..+. +++.+..+. ..+++++.||+++. .+++...+ .++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d~-----~~~l~~~~~~~~ 86 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKG-FAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTEG-----SDKLVEAIGDDS 86 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhccc-CCceEEEEeeCCCC-----HHHHHHHhhcCC
Confidence 34444 5689999999999999987732 2221 111111111 24689999999974 14555555 689
Q ss_pred cEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 75 NIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 75 DiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
|+|||+++......+ ...+++|+.|+.+++++|++ .++++||++||..+|+.... ..+.++..+
T Consensus 87 d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~-~~~~~iV~iSS~~v~g~~~~---~~~~~~~~~----------- 150 (251)
T PLN00141 87 DAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRK-AGVTRFILVSSILVNGAAMG---QILNPAYIF----------- 150 (251)
T ss_pred CEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHH-cCCCEEEEEccccccCCCcc---cccCcchhH-----------
Confidence 999999886421122 22357899999999999988 47899999999998875321 000000000
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i 234 (1217)
. .....|..+|..+|+++++ .+++++++||+.+++... . |.....
T Consensus 151 -----------~-~~~~~~~~~k~~~e~~l~~--~gi~~~iirpg~~~~~~~---~------------------~~~~~~ 195 (251)
T PLN00141 151 -----------L-NLFGLTLVAKLQAEKYIRK--SGINYTIVRPGGLTNDPP---T------------------GNIVME 195 (251)
T ss_pred -----------H-HHHHHHHHHHHHHHHHHHh--cCCcEEEEECCCccCCCC---C------------------ceEEEC
Confidence 0 0002355679999998876 479999999999987531 1 111000
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
.+ ......+|+.+|+++++..++..+..
T Consensus 196 ~~-~~~~~~~i~~~dvA~~~~~~~~~~~~ 223 (251)
T PLN00141 196 PE-DTLYEGSISRDQVAEVAVEALLCPES 223 (251)
T ss_pred CC-CccccCcccHHHHHHHHHHHhcChhh
Confidence 11 11123479999999999988875443
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=116.59 Aligned_cols=75 Identities=9% Similarity=0.162 Sum_probs=59.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCcccc-chhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVK-FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~-f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+++++.+|+++++ ++..++.++|.|||+++... .....+..+++|+.||.+++++|.+..++++||++||..
T Consensus 57 ~~~~~~~~Dl~d~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~ 130 (297)
T PLN02583 57 ERLKVFDVDPLDYH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT 130 (297)
T ss_pred CceEEEEecCCCHH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchH
Confidence 46889999999864 56677789999999987543 222345788999999999999998764678999999975
Q ss_pred ee
Q psy13944 628 SN 629 (1217)
Q Consensus 628 v~ 629 (1217)
++
T Consensus 131 a~ 132 (297)
T PLN02583 131 AV 132 (297)
T ss_pred he
Confidence 53
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.9e-08 Score=111.72 Aligned_cols=201 Identities=13% Similarity=0.050 Sum_probs=125.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
.-+||+.+.-|....++|.+.... +. +.+.+.......++..+.+|++++ +++..++ ..+
T Consensus 6 vlItGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 6 WFITGASRGFGRAWTEAALERGDR-VVATARDTATLADLAEKYGDRLLPLALDVTDR------AAVFAAVETAVEHFGRL 78 (275)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhccCCeeEEEccCCCH------HHHHHHHHHHHHHcCCC
Confidence 347899999999999998763211 11 111111111234688899999997 6665443 357
Q ss_pred cEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|+|||+||..... +.++..+++|+.|+..+++.+ ++ .+..++|++||..++....
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~------------- 144 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE-QRSGHIIQISSIGGISAFP------------- 144 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEEcChhhcCCCC-------------
Confidence 9999999976321 245678999999998888776 33 3567999999976543210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
.-..|+.||+..|.+.+... .|+++.++||+.+..+...+..........
T Consensus 145 -------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~ 199 (275)
T PRK08263 145 -------------------------MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDA 199 (275)
T ss_pred -------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchh
Confidence 01369999999888876653 589999999998876643211111011100
Q ss_pred hHHHHHHHhcCceeEEeeCCCceecc-ccHHHHHHHHHHHHHhhhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDM-VPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~-VpVDdVvnAii~aa~~~~~ 263 (1217)
...+...+..+ .....+ +.++|++++++.++.....
T Consensus 200 ~~~~~~~~~~~---------~~~~~~~~~p~dva~~~~~l~~~~~~ 236 (275)
T PRK08263 200 YDTLREELAEQ---------WSERSVDGDPEAAAEALLKLVDAENP 236 (275)
T ss_pred hhhHHHHHHHH---------HHhccCCCCHHHHHHHHHHHHcCCCC
Confidence 01111111111 112234 8899999999988775433
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3e-08 Score=108.42 Aligned_cols=191 Identities=12% Similarity=0.083 Sum_probs=126.8
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcCh-h--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFADD-A--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~~-v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
+.-++|+.+.-|..+.++|.+..... + .+.+.+.......++.++.+|++++ +++..++
T Consensus 8 ~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~ 81 (249)
T PRK12825 8 VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDK------AALEAAVAAAVER 81 (249)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCH------HHHHHHHHHHHHH
Confidence 34578999999999999987632221 1 1111111122345689999999998 6666554
Q ss_pred -CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCC
Q psy13944 72 -EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.++|+|||+||..... +.+...+++|+.|+.++++.+. + .+.++||++||..++....
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~i~~SS~~~~~~~~--------- 151 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRK-QRGGRIVNISSVAGLPGWP--------- 151 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEECccccCCCCC---------
Confidence 3679999999965321 2245778999999999998873 3 3578999999986643210
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
....|+.+|+..|.+++.++ .+++++++||+.++++...+..
T Consensus 152 -----------------------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~---- 198 (249)
T PRK12825 152 -----------------------------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI---- 198 (249)
T ss_pred -----------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc----
Confidence 01369999999998886553 5899999999999998543211
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ...... .. ......+++++|+++++..++..
T Consensus 199 ---~-~~~~~~-~~---------~~~~~~~~~~~dva~~~~~~~~~ 230 (249)
T PRK12825 199 ---E-EAREAK-DA---------ETPLGRSGTPEDIARAVAFLCSD 230 (249)
T ss_pred ---c-hhHHhh-hc---------cCCCCCCcCHHHHHHHHHHHhCc
Confidence 0 111110 00 01122389999999998877654
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.5e-08 Score=111.56 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=56.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
+++++.||++|+. ++..+++++|+|||+++.. ........++|+.|+.+++++|++. ++++|||+||..
T Consensus 44 ~v~~v~~Dl~d~~------~l~~al~g~d~Vi~~~~~~--~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~ 112 (317)
T CHL00194 44 GAELVYGDLSLPE------TLPPSFKGVTAIIDASTSR--PSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILN 112 (317)
T ss_pred CCEEEECCCCCHH------HHHHHHCCCCEEEECCCCC--CCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecccc
Confidence 5889999999864 6777889999999998642 2233356788999999999999997 799999999953
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.2e-08 Score=105.44 Aligned_cols=155 Identities=15% Similarity=0.075 Sum_probs=102.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH--------HhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD--------RLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd--------~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|..+.++|.+.-.. .+.+ .+...... ....+.++.+|+++. +.+..+++
T Consensus 9 vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~ 82 (249)
T PRK09135 9 ALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDP------DALPELVAACVAA 82 (249)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCH------HHHHHHHHHHHHH
Confidence 457899999999999999873211 0111 11110001 123578999999997 66665554
Q ss_pred --CccEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 --DVNIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 --~VDiViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+||... +. +.++..+++|+.|+.++++++.+. ..-..++++|+... . .+.+
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~-- 151 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA--E-------RPLK-- 151 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh--c-------CCCC--
Confidence 5799999999642 11 234578899999999999999642 11124555444221 0 0000
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~ 206 (1217)
.-+.|+.||+.+|.+++.+. ++++++++||+.++|+..
T Consensus 152 ---------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 152 ---------------------------GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED 193 (249)
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence 01469999999999998765 469999999999999865
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.2e-08 Score=115.21 Aligned_cols=94 Identities=22% Similarity=0.263 Sum_probs=67.7
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCcccc---chhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~---f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
.+.++.||++|.+ .+..+++ ++|+|||+||.-. ....+.+++++||.||.|++++|.++ ++++||++|
T Consensus 55 ~~~~vigDvrd~~------~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~IS 127 (293)
T PF02719_consen 55 EIVPVIGDVRDKE------RLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFIS 127 (293)
T ss_dssp EEE--CTSCCHHH------HHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEE
T ss_pred ccCceeecccCHH------HHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEcc
Confidence 4567899999853 5788888 8999999999643 23456689999999999999999998 899999999
Q ss_pred cceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 625 TAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 625 Ta~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
|--+.- | .|.||.||.+||.+++++.
T Consensus 128 TDKAv~------------P-----------------------------tnvmGatKrlaE~l~~~~~ 153 (293)
T PF02719_consen 128 TDKAVN------------P-----------------------------TNVMGATKRLAEKLVQAAN 153 (293)
T ss_dssp ECGCSS-------------------------------------------SHHHHHHHHHHHHHHHHC
T ss_pred ccccCC------------C-----------------------------CcHHHHHHHHHHHHHHHHh
Confidence 953211 1 1579999999999997754
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.1e-08 Score=119.94 Aligned_cols=95 Identities=23% Similarity=0.233 Sum_probs=79.5
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCcccc---chhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVK---FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~---f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
..++.++-||+.|.+ .++.++++ +|+|||+||.-. ...++.+++++||.||.|++++|.++ ++++||.
T Consensus 301 ~~~~~~~igdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~ 373 (588)
T COG1086 301 ELKLRFYIGDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVL 373 (588)
T ss_pred CcceEEEecccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEE
Confidence 467999999999964 57788887 999999999644 34567799999999999999999998 8999999
Q ss_pred Eccce-eecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 623 VSTAY-SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 623 vSTa~-v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+||-- ||+ .|.||.||.+||.+++++.
T Consensus 374 iSTDKAV~P------------------------------------------tNvmGaTKr~aE~~~~a~~ 401 (588)
T COG1086 374 ISTDKAVNP------------------------------------------TNVMGATKRLAEKLFQAAN 401 (588)
T ss_pred EecCcccCC------------------------------------------chHhhHHHHHHHHHHHHHh
Confidence 99952 221 2679999999999998764
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.3e-07 Score=104.22 Aligned_cols=190 Identities=11% Similarity=0.059 Sum_probs=123.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED----- 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~----- 73 (1217)
.=+||+.+.-|....++|.+.-...+. +. +.+.......++.++.+|++++ +.+..++++
T Consensus 9 ~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 82 (247)
T PRK12935 9 AIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKV------EDANRLVEEAVNHF 82 (247)
T ss_pred EEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHHc
Confidence 337888888899999988862221110 11 1111111224688999999998 666655543
Q ss_pred --ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 74 --VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 74 --VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
+|+|||+|+..... +.++..+++|+.|+..+++.+... ....++|++||.+..... .+
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~- 152 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG---------FG- 152 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC---------CC-
Confidence 79999999985321 345578899999999999998642 234589999996543210 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
-..|+.||++.|.+++... .++++++++|+.|.++.....
T Consensus 153 ----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~------- 197 (247)
T PRK12935 153 ----------------------------QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV------- 197 (247)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc-------
Confidence 1369999998887775543 589999999998876532111
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
+.........+ ....++.+++|++++++.++.
T Consensus 198 --~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~ 229 (247)
T PRK12935 198 --PEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCR 229 (247)
T ss_pred --cHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcC
Confidence 11111121121 223568999999999988774
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.8e-07 Score=102.85 Aligned_cols=192 Identities=14% Similarity=0.031 Sum_probs=125.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHH----hh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDR----LR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~----Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|..+.++|.+.... .+.++ +. +.......++.++.+|++++ +++..+++
T Consensus 9 ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 9 ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR------AALKAAVAAGVEDFG 82 (251)
T ss_pred EEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHHhC
Confidence 447889999999999988863211 01110 00 00011123588999999998 77666654
Q ss_pred CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHh---cCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEE---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+.... + +.+...+++|+.|+.++++.+.. ..+.++||++||...+.. +.+
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~---------~~~-- 151 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV---------GYP-- 151 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc---------CCC--
Confidence 68999999988653 2 23456899999999999998742 135678999999765310 000
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.-..|+.||+.+|.++..+. .+++++++||+.++|+...+...
T Consensus 152 --------------------------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~------ 199 (251)
T PRK12826 152 --------------------------GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD------ 199 (251)
T ss_pred --------------------------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc------
Confidence 01369999999999987764 48999999999999985433210
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
..+...+..+ .+ ...+++++|+++++..++.
T Consensus 200 --~~~~~~~~~~----~~-----~~~~~~~~dva~~~~~l~~ 230 (251)
T PRK12826 200 --AQWAEAIAAA----IP-----LGRLGEPEDIAAAVLFLAS 230 (251)
T ss_pred --hHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhC
Confidence 1111111111 11 1247899999999987653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.1e-07 Score=109.23 Aligned_cols=153 Identities=15% Similarity=0.138 Sum_probs=103.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
.=+||+.+.-|....++|.+..... + -+.+.+...+...++.++.+|++++ ++++.++ ..+|
T Consensus 8 ~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 8 VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDE------AQIREGFEQLHREFGRID 81 (520)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCH------HHHHHHHHHHHHHhCCCC
Confidence 3478998889999999998743221 1 1122211112234677899999998 6666554 3589
Q ss_pred EEEEcCccCC-----c-c---cCHHHHHHHHHHHHHHHHHHhHhc---CCC-CeEEEEcCcccccccccccccccCCCCC
Q psy13944 76 IVFHVAATVK-----F-D---EHFQTAFEINCKGTEKLLKMAEEM---KNL-DSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 76 iViH~AA~v~-----f-~---e~l~~a~~vNV~GT~~LLelAk~~---~~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
++||+||... + + +.++..+++|+.|+..+++++... .+- .++|++||....... +
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~----------~-- 149 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL----------P-- 149 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC----------C--
Confidence 9999998631 1 1 235578999999999998887643 122 389999996542210 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..+.+++... .++.+..+.|+.|-.+
T Consensus 150 --------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 150 --------------------------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred --------------------------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 11469999999999876653 5788999999977554
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-07 Score=104.45 Aligned_cols=228 Identities=10% Similarity=0.042 Sum_probs=138.8
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-CccEEEEcCccC----
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-DVNIVFHVAATV---- 84 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-~VDiViH~AA~v---- 84 (1217)
.||.++.-|..+.+||.+.-.. +.-..|+ .+....++....--+ +.+..+.. ++|+|||+||..
T Consensus 3 iTGgTGlIG~~L~~~L~~~gh~-v~iltR~-~~~~~~~~~~~v~~~---------~~~~~~~~~~~DavINLAG~~I~~r 71 (297)
T COG1090 3 ITGGTGLIGRALTARLRKGGHQ-VTILTRR-PPKASQNLHPNVTLW---------EGLADALTLGIDAVINLAGEPIAER 71 (297)
T ss_pred EeccccchhHHHHHHHHhCCCe-EEEEEcC-CcchhhhcCcccccc---------chhhhcccCCCCEEEECCCCccccc
Confidence 5889999999999999875332 2221222 222222222111000 22233333 799999999975
Q ss_pred CcccCHH-HHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 85 KFDEHFQ-TAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 85 ~f~e~l~-~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
++++..+ ...+.-+.+|..|.++..++ ...+.||--|.+.-||+... ++|.. ++.
T Consensus 72 rWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~-~~g-------------------- 130 (297)
T COG1090 72 RWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES-PPG-------------------- 130 (297)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC-CCC--------------------
Confidence 3444444 67788899999999998754 46667777777788887653 44431 110
Q ss_pred cccccCCCCCChHHH-HHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCC
Q psy13944 161 LNDILIKPMPNTYTL-SKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNT 238 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~-SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~ 238 (1217)
+.+.. .=..=|+...+.. .+..++++|.++|.|+.. |-...+ ......+.| --.|+|
T Consensus 131 ----------~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~G----GaL~~m----~~~fk~glG---G~~GsG 189 (297)
T COG1090 131 ----------DDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDG----GALGKM----LPLFKLGLG---GKLGSG 189 (297)
T ss_pred ----------CChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCC----cchhhh----cchhhhccC---CccCCC
Confidence 11110 0001133333333 588999999999999743 111111 111222222 135899
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYI 317 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~i 317 (1217)
.+...|||+||+|++|+.+..+... ...||..+. |++..++...+
T Consensus 190 rQ~~SWIhieD~v~~I~fll~~~~l----------------------------------sGp~N~taP~PV~~~~F~~al 235 (297)
T COG1090 190 RQWFSWIHIEDLVNAILFLLENEQL----------------------------------SGPFNLTAPNPVRNKEFAHAL 235 (297)
T ss_pred CceeeeeeHHHHHHHHHHHHhCcCC----------------------------------CCcccccCCCcCcHHHHHHHH
Confidence 9999999999999999999987655 234666665 67778888888
Q ss_pred HHhhchh
Q psy13944 318 KQNIKEK 324 (1217)
Q Consensus 318 a~~~g~~ 324 (1217)
.+.++++
T Consensus 236 ~r~l~RP 242 (297)
T COG1090 236 GRALHRP 242 (297)
T ss_pred HHHhCCC
Confidence 8887754
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.6e-07 Score=102.73 Aligned_cols=196 Identities=14% Similarity=0.139 Sum_probs=124.8
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcCh-hH----HHh---hhcCccc--CCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADD-AF----DRL---RKENANF--TERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~L---r~~~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
+..=+||+.+.-|..+.++|.+..... +. +.+ .++.... ..++.++.+|++++ +++..+++
T Consensus 8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~ 81 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE------DQVARAVDAAT 81 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH------HHHHHHHHHHH
Confidence 445588998899999999998632210 01 111 1110111 24688999999998 66666554
Q ss_pred ----CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 73 ----DVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 ----~VDiViH~AA~v~f~--------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|+|||+|+..... +.+...+++|+.|+..+++.+.+. .+-.+||++||..+....
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------- 153 (276)
T PRK05875 82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH-------- 153 (276)
T ss_pred HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC--------
Confidence 679999999864211 124567889999999999877542 223589999997653210
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
...+.|+.||+..|.+++.+. .++.+.++||+.+.++...+.
T Consensus 154 ------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~--- 200 (276)
T PRK05875 154 ------------------------------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI--- 200 (276)
T ss_pred ------------------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc---
Confidence 011469999999999998764 578899999998876543211
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
... .........+ .....++.++|++++++.++..+
T Consensus 201 ---~~~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~ 236 (276)
T PRK05875 201 ---TES-PELSADYRAC---------TPLPRVGEVEDVANLAMFLLSDA 236 (276)
T ss_pred ---ccC-HHHHHHHHcC---------CCCCCCcCHHHHHHHHHHHcCch
Confidence 000 1111111111 11233677999999999887543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.7e-08 Score=106.52 Aligned_cols=193 Identities=16% Similarity=0.084 Sum_probs=124.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-----HHHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-----FDRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-----fd~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.=+||+.+.-|..+.++|.+..... + -+.+. +.......++.++.+|++++ +++..+++
T Consensus 9 ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~i~~~~~~~~~~~ 82 (254)
T PRK12746 9 ALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSI------DGVKKLVEQLKNEL 82 (254)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCH------HHHHHHHHHHHHHh
Confidence 4488999999999999998732211 1 01111 11111124688999999998 66655444
Q ss_pred -------CccEEEEcCccCCc---c-cC---HHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccccccccc
Q psy13944 73 -------DVNIVFHVAATVKF---D-EH---FQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 -------~VDiViH~AA~v~f---~-e~---l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
++|+|||+||.... . .+ ++..+++|+.|+.++++.+.+. ....++|++||..++....
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~------- 155 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT------- 155 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC-------
Confidence 58999999997421 1 12 3567889999999999998752 2335899999986643210
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
....|+.||++.|.+++.+. .++++++++|+.+.++......
T Consensus 156 -------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~-- 202 (254)
T PRK12746 156 -------------------------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLL-- 202 (254)
T ss_pred -------------------------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhc--
Confidence 01359999999999876553 5799999999999887532210
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. . ..+.....+ ......+++++|+++++..++..
T Consensus 203 -~---~--~~~~~~~~~--------~~~~~~~~~~~dva~~~~~l~~~ 236 (254)
T PRK12746 203 -D---D--PEIRNFATN--------SSVFGRIGQVEDIADAVAFLASS 236 (254)
T ss_pred -c---C--hhHHHHHHh--------cCCcCCCCCHHHHHHHHHHHcCc
Confidence 0 0 111111111 11223577899999998766543
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.9e-08 Score=106.31 Aligned_cols=200 Identities=11% Similarity=0.008 Sum_probs=122.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH----H---HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF----D---RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d---~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+.... .+. + .+..+......++..+.+|++++ ++++.+++
T Consensus 7 vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 7 ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE------EAINAGIDYAVETFG 80 (258)
T ss_pred EEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 457899899999999998863211 011 1 11111111235788999999998 66665544
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHH----hHhcCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKM----AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLel----Ak~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+|+..... +.+...+++|+.|+.++++. +++ .+.++||++||........
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~iss~~~~~~~~----------- 148 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA-QGGGRIINMASVHGLVGSA----------- 148 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh-cCCeEEEEEcchhhccCCC-----------
Confidence 589999999975332 12345778999995555544 444 4678999999975432110
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc-ccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP-MWVKG 215 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p-GWidn 215 (1217)
..+.|+.+|+..+.+.+.+. .++.+.++||+.+.++...+.. .-...
T Consensus 149 ---------------------------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~ 201 (258)
T PRK12429 149 ---------------------------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKE 201 (258)
T ss_pred ---------------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccc
Confidence 01469999998887776543 5789999999999987532110 00000
Q ss_pred cc-hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MN-GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~-g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.. ......... ........++++++|++++++.++..
T Consensus 202 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~a~~~~~l~~~ 239 (258)
T PRK12429 202 RGISEEEVLEDV--------LLPLVPQKRFTTVEEIADYALFLASF 239 (258)
T ss_pred cCCChHHHHHHH--------HhccCCccccCCHHHHHHHHHHHcCc
Confidence 00 000111111 11122345799999999998877654
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3e-07 Score=103.66 Aligned_cols=197 Identities=12% Similarity=0.081 Sum_probs=124.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HHhhh---cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DRLRK---ENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~---~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.=+||+.+.-|..+.++|.+... .+. +.+.+ +......++.++.+|++++ +++..+++
T Consensus 13 vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~ 85 (274)
T PRK07775 13 ALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP------DSVKSFVAQAEEAL 85 (274)
T ss_pred EEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHhc
Confidence 44788888889999999986321 111 11111 1111124678889999998 66665543
Q ss_pred -CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+|+.... + +.+...+++|+.|+.++++.+.+. .+..+||++||...+... |
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~----------~- 154 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR----------P- 154 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC----------C-
Confidence 57999999997532 1 223466899999999999887531 244579999997654321 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.+|+..|.+++.++ .+++++++||+.+.++..... ...
T Consensus 155 ---------------------------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~---~~~- 203 (274)
T PRK07775 155 ---------------------------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSL---PAE- 203 (274)
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccC---Chh-
Confidence 01359999999999998765 489999999987754421100 000
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
....++..... .+ +.....++++||+|++++.++.++
T Consensus 204 -~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~~~~~~~~ 240 (274)
T PRK07775 204 -VIGPMLEDWAK------WG-QARHDYFLRASDLARAITFVAETP 240 (274)
T ss_pred -hhhHHHHHHHH------hc-ccccccccCHHHHHHHHHHHhcCC
Confidence 01111111111 00 122356899999999999887653
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.2e-08 Score=103.54 Aligned_cols=244 Identities=14% Similarity=0.133 Sum_probs=167.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--CCccEEEEcCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR--EDVNIVFHVAAT 83 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~--~~VDiViH~AA~ 83 (1217)
.-+||+-+.-|.....=|+..+.+ .+...+++-.....+.--+|..|+.|- ..++++. ..+|..||..|.
T Consensus 47 vLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~------K~L~eIVVn~RIdWL~HfSAL 120 (366)
T KOG2774|consen 47 VLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQ------KSLEEIVVNKRIDWLVHFSAL 120 (366)
T ss_pred EEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhcc------ccHHHhhcccccceeeeHHHH
Confidence 446777777777777777776664 445556655555666667888999887 5666665 457999999887
Q ss_pred CC-ccc-CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 84 VK-FDE-HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 84 v~-f~e-~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
.+ +.| +...+.++|+.|..|+++.|++. +++- ..-||..++|+... .+|
T Consensus 121 LSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~i-FVPSTIGAFGPtSP---------RNP------------------ 171 (366)
T KOG2774|consen 121 LSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKV-FVPSTIGAFGPTSP---------RNP------------------ 171 (366)
T ss_pred HHHhcccCCceeeeecchhhhHHHHHHHHc-CeeE-eecccccccCCCCC---------CCC------------------
Confidence 53 222 33457899999999999999995 6654 44688888886431 111
Q ss_pred ccccCCCCC-ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCC
Q psy13944 162 NDILIKPMP-NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNT 238 (1217)
Q Consensus 162 tp~~~~~~P-NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~ 238 (1217)
||.+.-+.| .-||.||.-||.+-+.+. .|+++-.+|...+++... |-.|-.| +...-+--+..+|.- +.+-.+
T Consensus 172 TPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~-pgggttd--ya~A~f~~Al~~gk~-tCylrp 247 (366)
T KOG2774|consen 172 TPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATK-PGGGTTD--YAIAIFYDALQKGKH-TCYLRP 247 (366)
T ss_pred CCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCC-CCCCcch--hHHHHHHHHHHcCCc-ccccCC
Confidence 122222334 349999999998877665 788999999888877643 3233332 222223334445543 344567
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIK 318 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia 318 (1217)
+....+.+..|+-.+++..+..+.. . ...++||+..-+++-.|+++.+.
T Consensus 248 dtrlpmmy~~dc~~~~~~~~~a~~~----~---------------------------lkrr~ynvt~~sftpee~~~~~~ 296 (366)
T KOG2774|consen 248 DTRLPMMYDTDCMASVIQLLAADSQ----S---------------------------LKRRTYNVTGFSFTPEEIADAIR 296 (366)
T ss_pred CccCceeehHHHHHHHHHHHhCCHH----H---------------------------hhhheeeeceeccCHHHHHHHHH
Confidence 8899999999999999887765444 1 12568999988999999998887
Q ss_pred Hhh
Q psy13944 319 QNI 321 (1217)
Q Consensus 319 ~~~ 321 (1217)
+..
T Consensus 297 ~~~ 299 (366)
T KOG2774|consen 297 RVM 299 (366)
T ss_pred hhC
Confidence 664
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.4e-07 Score=115.29 Aligned_cols=201 Identities=13% Similarity=0.086 Sum_probs=130.9
Q ss_pred cccCC-CcccCCCCCCcccHHHHHHHHhcC-hhH----HHhhh---c---------CcccCCCeEEEEccCCCCCCCCCH
Q psy13944 3 QNRGK-LGHNGAKTCKHNSILWVAKDFFAD-DAF----DRLRK---E---------NANFTERIVVLTADLQSDGLGLDE 64 (1217)
Q Consensus 3 ~~~g~-~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr~---~---------~p~~~~kI~~V~GDl~d~~LGLs~ 64 (1217)
.+.|+ +-++|+.+.-|..+.++|.+.... .++ +++.+ . ......++.++.||+++.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~------ 150 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP------ 150 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH------
Confidence 34555 458999999999999999874222 111 11111 0 001124689999999998
Q ss_pred HHHHHhcCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 65 KEKKVLREDVNIVFHVAATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 65 edl~~L~~~VDiViH~AA~v~f~-e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+++..++.++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++||++||.+++... ..+..+
T Consensus 151 esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g--~p~~~~------ 221 (576)
T PLN03209 151 DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVG--FPAAIL------ 221 (576)
T ss_pred HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccC--ccccch------
Confidence 88888889999999999875321 134567889999999999999984 78999999998653110 000000
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
..-..|...|..+|+.+.. .|++++|+||+.+.++.... . ..
T Consensus 222 ------------------------~sk~~~~~~KraaE~~L~~--sGIrvTIVRPG~L~tp~d~~-~---~t-------- 263 (576)
T PLN03209 222 ------------------------NLFWGVLCWKRKAEEALIA--SGLPYTIVRPGGMERPTDAY-K---ET-------- 263 (576)
T ss_pred ------------------------hhHHHHHHHHHHHHHHHHH--cCCCEEEEECCeecCCcccc-c---cc--------
Confidence 0013588889999988875 58999999999998763321 0 00
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
+.......+ ....-.+..+|||++++.++.+..
T Consensus 264 -----~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~ 296 (576)
T PLN03209 264 -----HNLTLSEED-TLFGGQVSNLQVAELMACMAKNRR 296 (576)
T ss_pred -----cceeecccc-ccCCCccCHHHHHHHHHHHHcCch
Confidence 101111111 111225788999999998887554
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.1e-07 Score=103.66 Aligned_cols=204 Identities=11% Similarity=-0.000 Sum_probs=125.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
.-+||+.+.-|..+.++|.+.... +. +.+.........++..+.+|++++ +.+..+++ .+
T Consensus 7 vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 7 WLITGVSSGFGRALAQAALAAGHR-VVGTVRSEAARADFEALHPDRALARLLDVTDF------DAIDAVVADAEATFGPI 79 (277)
T ss_pred EEEecCCChHHHHHHHHHHhCcCE-EEEEeCCHHHHHHHHhhcCCCeeEEEccCCCH------HHHHHHHHHHHHHhCCC
Confidence 458899999999999999763221 11 111111112234688999999998 66665544 57
Q ss_pred cEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh---cCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 75 NIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 75 DiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
|+|||+|+..... +.++..+++|+.|+.++++++.. ..+..++|++||....... |
T Consensus 80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~----------~---- 145 (277)
T PRK06180 80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM----------P---- 145 (277)
T ss_pred CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC----------C----
Confidence 9999999985421 12346789999999999998542 1345689999997543210 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc-ccccccch
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP-MWVKGMNG 218 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p-GWidn~~g 218 (1217)
.-..|+.||+..|.+++..+ .+++++++||+.+.+++..+.. ........
T Consensus 146 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~ 201 (277)
T PRK06180 146 ------------------------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIAD 201 (277)
T ss_pred ------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHh
Confidence 01369999999998887654 4899999999999876532210 00000100
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
............. . .....+..++|++++++.++....
T Consensus 202 ~~~~~~~~~~~~~---~---~~~~~~~~~~dva~~~~~~l~~~~ 239 (277)
T PRK06180 202 YDALFGPIRQARE---A---KSGKQPGDPAKAAQAILAAVESDE 239 (277)
T ss_pred HHHHHHHHHHHHH---h---hccCCCCCHHHHHHHHHHHHcCCC
Confidence 0111111111000 0 011235679999999998876543
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.4e-08 Score=110.27 Aligned_cols=204 Identities=13% Similarity=0.052 Sum_probs=125.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hh----HH---HhhhcCc--ccCCCeEEEEccCCCCCCCCCHHHHHH------hc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DA----FD---RLRKENA--NFTERIVVLTADLQSDGLGLDEKEKKV------LR 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~v----fd---~Lr~~~p--~~~~kI~~V~GDl~d~~LGLs~edl~~------L~ 71 (1217)
.-+||+.+.-|..+.++|.+.... .+ -+ .+.+... ....+++++.+|++++ ++++. ..
T Consensus 6 ~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~~~~ 79 (280)
T PRK06914 6 AIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ------NSIHNFQLVLKEI 79 (280)
T ss_pred EEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH------HHHHHHHHHHHhc
Confidence 357899999999999998873211 00 11 1111111 1125789999999998 65543 12
Q ss_pred CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 72 EDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
..+|+|||+|+.... . +.+...+++|+.|+.++++.+ ++ .+..+||++||..+.... +
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~vsS~~~~~~~----------~ 148 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRK-QKSGKIINISSISGRVGF----------P 148 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEECcccccCCC----------C
Confidence 457999999987531 1 234467889999999988886 33 356789999996442110 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc-
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK- 214 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid- 214 (1217)
....|+.||+..|.+++.++ .+++++++||+.+.++...+......
T Consensus 149 ----------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~ 200 (280)
T PRK06914 149 ----------------------------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAEN 200 (280)
T ss_pred ----------------------------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhcccccccc
Confidence 01469999999999887653 58999999999998874322110000
Q ss_pred --ccchh-HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 215 --GMNGL-TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 215 --n~~g~-~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
....+ ...+..+.. .+ ......+++++|+|++++.++.++..
T Consensus 201 ~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~dva~~~~~~~~~~~~ 245 (280)
T PRK06914 201 QSETTSPYKEYMKKIQK----HI---NSGSDTFGNPIDVANLIVEIAESKRP 245 (280)
T ss_pred ccccccchHHHHHHHHH----HH---hhhhhccCCHHHHHHHHHHHHcCCCC
Confidence 00000 111111110 00 01223578899999999998875443
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.3e-08 Score=107.13 Aligned_cols=201 Identities=12% Similarity=0.085 Sum_probs=126.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hh----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DA----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.=+||+.+.-|..+.++|.+.... .+ .+.+.+.......++.++.+|++++ ++++.+++ .+|
T Consensus 9 vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 9 ALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQ------DSIDRIVAAAVERFGGID 82 (257)
T ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH------HHHHHHHHHHHHHcCCCC
Confidence 447888888999999999873221 01 1111111112234688999999998 66665554 579
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+|+..... +.++..+++|+.|+.++++++... ..-.++|++||...... .+
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~---- 148 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG----------EA---- 148 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC----------CC----
Confidence 999999975321 235578899999999999998642 11247999999643111 00
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc--
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN-- 217 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~-- 217 (1217)
.-..|+.||+..|.+++..+ .++++.++||+.|+++..+..........
T Consensus 149 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~ 204 (257)
T PRK07067 149 ------------------------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENR 204 (257)
T ss_pred ------------------------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCC
Confidence 01369999999888876543 68999999999999874322100000000
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.+..... ..+.......+++++|++++++.++...
T Consensus 205 ~~~~~~~---------~~~~~~~~~~~~~~~dva~~~~~l~s~~ 239 (257)
T PRK07067 205 PPGEKKR---------LVGEAVPLGRMGVPDDLTGMALFLASAD 239 (257)
T ss_pred CHHHHHH---------HHhhcCCCCCccCHHHHHHHHHHHhCcc
Confidence 0000000 1122234567899999999998877643
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-07 Score=103.79 Aligned_cols=220 Identities=14% Similarity=0.079 Sum_probs=138.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH----HhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD----RLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd----~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
.=+||+.+.-|.....+|.+.-.. -+.+ .+.+.... ...++.++.+|+.++ +++..+++ ++
T Consensus 5 ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 5 ALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDA------ASLAAALANAAAERGPV 78 (257)
T ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHHHHHHHcCCC
Confidence 347888888899999998763211 1111 11000000 124688999999998 66665554 47
Q ss_pred cEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 75 NIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 75 DiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
|+|||+|+..... +.+...+.+|+.|+.++++.+.. + .+..++|++||...... +
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------~------- 143 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA--------L------- 143 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC--------C-------
Confidence 9999999975321 11335577999999999988832 1 34468999999643211 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
.+ ..|+.||++.|.+++.++ .++++.++||+.+.++..... ....
T Consensus 144 -----------------------~~-~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~------~~~~ 193 (257)
T PRK07074 144 -----------------------GH-PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEAR------VAAN 193 (257)
T ss_pred -----------------------CC-cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcc------cccC
Confidence 00 159999999998887765 479999999999887642110 0001
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccc
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDV 299 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~ 299 (1217)
..+...... .....++++++|++++++.++..... . ..|.
T Consensus 194 ~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~~----~---------------------------~~g~ 233 (257)
T PRK07074 194 PQVFEELKK---------WYPLQDFATPDDVANAVLFLASPAAR----A---------------------------ITGV 233 (257)
T ss_pred hHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCchhc----C---------------------------cCCc
Confidence 112111111 12235799999999999988753222 0 1266
Q ss_pred eeeccCC-ccCchHHHHHHH
Q psy13944 300 NYEINHG-NYDTTNHVNYIK 318 (1217)
Q Consensus 300 ~YnI~sg-~~s~~el~~~ia 318 (1217)
.+++..| .....|+.+.+-
T Consensus 234 ~~~~~~g~~~~~~~~~~~~~ 253 (257)
T PRK07074 234 CLPVDGGLTAGNREMARTLT 253 (257)
T ss_pred EEEeCCCcCcCChhhhhhhc
Confidence 7778777 677778776543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.9e-07 Score=117.76 Aligned_cols=64 Identities=23% Similarity=0.268 Sum_probs=54.0
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
++.++.+|+++.+ ++..+++++|+|||+||.... ..++|+.||.+++++|++. ++++|||+||.
T Consensus 41 ~v~~v~gDL~D~~------~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~ 104 (854)
T PRK05865 41 SADFIAADIRDAT------AVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSG 104 (854)
T ss_pred CceEEEeeCCCHH------HHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCc
Confidence 5788999999853 577777899999999986432 4678999999999999987 78899999985
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.2e-07 Score=107.56 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=47.7
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh--cCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR--EDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~--~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.++++.||+++ ++.++ .++|+|||+++. ++.++.+|+++|++. ++++|||+||+.
T Consensus 111 ~v~~v~~D~~d---------~~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~ 167 (378)
T PLN00016 111 GVKTVWGDPAD---------VKSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAG 167 (378)
T ss_pred CceEEEecHHH---------HHhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHh
Confidence 48899999976 22222 478999999763 255789999999987 799999999999
Q ss_pred eecCc
Q psy13944 628 SNCNI 632 (1217)
Q Consensus 628 v~g~~ 632 (1217)
+|+..
T Consensus 168 vyg~~ 172 (378)
T PLN00016 168 VYKKS 172 (378)
T ss_pred hcCCC
Confidence 99863
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.1e-07 Score=103.87 Aligned_cols=200 Identities=13% Similarity=0.059 Sum_probs=125.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-H----HHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-F----DRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-f----d~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.=+||+.+.-|....++|.+.....+ . +.+. ++......++.++.+|++++ +++..+++
T Consensus 9 vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 82 (275)
T PRK05876 9 AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHR------EEVTHLADEAFRLLG 82 (275)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCH------HHHHHHHHHHHHHcC
Confidence 34889999999999999987322111 0 1111 11111123578899999998 66665554
Q ss_pred CccEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+||... +. +.++..+++|+.|+.++++.+.. ...-.++|++||...+... |
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~----------~- 151 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN----------A- 151 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC----------C-
Confidence 4799999999742 11 22446789999999999988752 1223589999997654211 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHH----HHHHHHHhc-CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNA----CEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~----AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+. +|.+..++. .++.+.+++|+.+.++....... ...
T Consensus 152 ---------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~- 202 (275)
T PRK05876 152 ---------------------------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSER-IRG- 202 (275)
T ss_pred ---------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhh-hcC-
Confidence 11469999996 666666665 68999999999887764321100 000
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
............+......++++++|||++++.++.+
T Consensus 203 -------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~ 239 (275)
T PRK05876 203 -------AACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA 239 (275)
T ss_pred -------ccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence 0000000011223334557899999999999988764
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=7.3e-07 Score=98.37 Aligned_cols=194 Identities=16% Similarity=0.062 Sum_probs=124.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--HH-------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--FD-------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--fd-------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.=.||+.+.-|....++|.+.....+ .. .+.++......++.++.+|++++ +++..+++
T Consensus 7 vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 80 (250)
T PRK08063 7 ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV------EKIKEMFAQIDEEF 80 (250)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 34788888889999998887422211 11 01111111234688899999998 76665554
Q ss_pred -CccEEEEcCccCCcc----c---CHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD----E---HFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~----e---~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+|+..... . .+...+++|+.|+..+++++.+. .+.++||++||..+.... +
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~- 149 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL----------E- 149 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC----------C-
Confidence 579999999864321 1 23356889999999999888642 234599999996542210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||++.|.+++.+. .++++.+++|+.+..+.....+++
T Consensus 150 ---------------------------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~---- 198 (250)
T PRK08063 150 ---------------------------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR---- 198 (250)
T ss_pred ---------------------------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc----
Confidence 01369999999999987654 578999999999977643222211
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..+....... . ....+++.+|++++++.++.+.
T Consensus 199 ---~~~~~~~~~~-~--------~~~~~~~~~dva~~~~~~~~~~ 231 (250)
T PRK08063 199 ---EELLEDARAK-T--------PAGRMVEPEDVANAVLFLCSPE 231 (250)
T ss_pred ---hHHHHHHhcC-C--------CCCCCcCHHHHHHHHHHHcCch
Confidence 1121111111 0 1124789999999998877543
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.6e-07 Score=100.66 Aligned_cols=198 Identities=15% Similarity=0.081 Sum_probs=122.9
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
++.-+||+.+.-|..+.++|.+-... .-.+.+.++.+.. ++.++.+|++++ +++..++
T Consensus 12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~------~~~~~~~~~~~~~ 83 (264)
T PRK12829 12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADP------AQVERVFDTAVER 83 (264)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCH------HHHHHHHHHHHHH
Confidence 34558999999999999999863221 0111111111211 678999999998 6655444
Q ss_pred -CCccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHhHhc---CCC-CeEEEEcCcccccccccccccccC
Q psy13944 72 -EDVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEEM---KNL-DSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f--------~e~l~~a~~vNV~GT~~LLelAk~~---~~l-k~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.++|+|||+||.... .+.+...+++|+.|+.++++.+.+. .+. +.|+++||.+....
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~---------- 153 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG---------- 153 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC----------
Confidence 468999999997621 1234578899999999998887421 233 56888887543111
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc-
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW- 212 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW- 212 (1217)
.+ . ...|+.+|...|.++...+ .+++++++||+.++++..+.....
T Consensus 154 ~~---------------------------~-~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~ 205 (264)
T PRK12829 154 YP---------------------------G-RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEAR 205 (264)
T ss_pred CC---------------------------C-CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhh
Confidence 00 0 0359999999999987764 489999999999999854321100
Q ss_pred --ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 213 --VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 213 --idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
.... +.......... . .....+++++|+++++..++.
T Consensus 206 ~~~~~~-~~~~~~~~~~~----~-----~~~~~~~~~~d~a~~~~~l~~ 244 (264)
T PRK12829 206 AQQLGI-GLDEMEQEYLE----K-----ISLGRMVEPEDIAATALFLAS 244 (264)
T ss_pred hhccCC-ChhHHHHHHHh----c-----CCCCCCCCHHHHHHHHHHHcC
Confidence 0000 00011111111 0 112358999999999877654
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=7e-07 Score=98.89 Aligned_cols=191 Identities=16% Similarity=0.140 Sum_probs=122.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHH-----h---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDR-----L---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~-----L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
+=+||+.+.-|..+.++|.+.-.. -+.++ + .+.......++.++.+|++++ +++..++
T Consensus 5 vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 78 (256)
T PRK12745 5 ALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADL------SAHEAMLDAAQAAW 78 (256)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHHHHHHhc
Confidence 346888888888888888864211 11110 0 000011234789999999998 6655544
Q ss_pred CCccEEEEcCccCCc---------ccCHHHHHHHHHHHHHHHHHHhHhc----CC-----CCeEEEEcCccccccccccc
Q psy13944 72 EDVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAEEM----KN-----LDSFIYVSTAYSNCNIKKIE 133 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f---------~e~l~~a~~vNV~GT~~LLelAk~~----~~-----lk~fV~vSTa~v~g~~~~I~ 133 (1217)
..+|+|||+||.... .+.++..+++|+.|+.++++.+.+. +. ..+||++||..+.....
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--- 155 (256)
T PRK12745 79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP--- 155 (256)
T ss_pred CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC---
Confidence 367999999987431 1235578999999999998887542 11 56799999976532110
Q ss_pred ccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCC
Q psy13944 134 EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEP 208 (1217)
Q Consensus 134 E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP 208 (1217)
....|+.+|++.|.+++.++ .+++++++||+.+.++...+
T Consensus 156 -----------------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~ 200 (256)
T PRK12745 156 -----------------------------------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP 200 (256)
T ss_pred -----------------------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc
Confidence 01459999999999887764 68999999999998865432
Q ss_pred CcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 209 CPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 209 ~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
. .+. .......+.. ...++.+++|+++++..++.
T Consensus 201 ~---~~~------~~~~~~~~~~--------~~~~~~~~~d~a~~i~~l~~ 234 (256)
T PRK12745 201 V---TAK------YDALIAKGLV--------PMPRWGEPEDVARAVAALAS 234 (256)
T ss_pred c---chh------HHhhhhhcCC--------CcCCCcCHHHHHHHHHHHhC
Confidence 1 111 1111111111 12357799999998887654
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.2e-07 Score=100.27 Aligned_cols=195 Identities=10% Similarity=0.013 Sum_probs=122.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
.-.||+.+.-|....++|.+.-.+.+. +.+. +.......++..+.+|++++ +++..++
T Consensus 9 vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 82 (252)
T PRK06077 9 VVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTR------EGCETLAKATIDRY 82 (252)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCH------HHHHHHHHHHHHHc
Confidence 447899999999999999863222111 0000 00011123567889999988 5555443
Q ss_pred CCccEEEEcCccCCc----ccC---HHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 72 EDVNIVFHVAATVKF----DEH---FQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f----~e~---l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
..+|+|||+||.... +.+ ++..+++|+.|+..+++++.+. ..-.+||++||..++....
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 149 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY------------- 149 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC-------------
Confidence 367999999996322 112 3467899999999999988753 2235899999976543210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
.-+.|+.||+..|.+++.++ +++.+.+++|+.+.++.......+.. . .
T Consensus 150 -------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~-~--~ 201 (252)
T PRK06077 150 -------------------------GLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG-M--S 201 (252)
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc-c--c
Confidence 01469999999999988765 46888889999887764211110000 0 0
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.. .... .......+++++|+|++++.++..
T Consensus 202 ~~---~~~~--------~~~~~~~~~~~~dva~~~~~~~~~ 231 (252)
T PRK06077 202 EK---EFAE--------KFTLMGKILDPEEVAEFVAAILKI 231 (252)
T ss_pred HH---HHHH--------hcCcCCCCCCHHHHHHHHHHHhCc
Confidence 00 0000 011223689999999999988853
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=2e-07 Score=105.31 Aligned_cols=191 Identities=11% Similarity=0.040 Sum_probs=116.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|..+.++|.+..... +. +.+.++......++.++.+|++++ ++++.+++
T Consensus 9 vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~g 82 (287)
T PRK06194 9 AVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA------AQVEALADAALERFG 82 (287)
T ss_pred EEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 4589999999999999998732211 11 111111111134688899999998 77776655
Q ss_pred CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHh----HhcCC-----CCeEEEEcCcccccccccccccc
Q psy13944 73 DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMA----EEMKN-----LDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelA----k~~~~-----lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
.+|+|||+||.... + +.++..+++|+.|+.++++++ .+... ..++|++||.+.+...
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------- 155 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP------- 155 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------
Confidence 47999999998642 1 223467899999999976664 22211 1489999997664321
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCccccc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
+ ..+.|+.||+..|.+++.++ .+.+...+|...+. ||+++
T Consensus 156 ---~----------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~-------pg~i~ 197 (287)
T PRK06194 156 ---P----------------------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC-------PYFVP 197 (287)
T ss_pred ---C----------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEE-------eCccc
Confidence 0 01469999999999998765 22222334433332 12222
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHH
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILL 255 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii 255 (1217)
... .....+....+.+++.+.+++++++|++.++.
T Consensus 198 t~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T PRK06194 198 TGI------WQSERNRPADLANTAPPTRSQLIAQAMSQKAV 232 (287)
T ss_pred Ccc------ccccccCchhcccCccccchhhHHHHHHHhhh
Confidence 110 01111222334566678888999988887754
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.6e-07 Score=101.95 Aligned_cols=199 Identities=13% Similarity=0.027 Sum_probs=121.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHH--------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDR--------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~--------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-.||+.+.-|....++|.+...+. +..+ +..+......++.++.+|++++ +++..+++
T Consensus 9 vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 82 (248)
T PRK07806 9 ALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDE------ESVAALMDTAREEF 82 (248)
T ss_pred EEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHhC
Confidence 3478999999999999887632221 1111 1100011124578899999998 66655543
Q ss_pred -CccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 73 -DVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
.+|+|||+|+.... ...+...+++|+.|+.++++.+.+. ..-.++|++||..+..... .+ +.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--~~---~~---------- 147 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT--VK---TM---------- 147 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc--cc---CC----------
Confidence 58999999986421 2234567889999999999999863 2234899999954321000 00 00
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
..-..|+.||+.+|.+++.++ .++++.+++|+.+-++....+. ... .+ +.+.
T Consensus 148 ------------------~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~---~~~-~~-~~~~ 204 (248)
T PRK07806 148 ------------------PEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLL---NRL-NP-GAIE 204 (248)
T ss_pred ------------------ccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhh---ccC-CH-HHHH
Confidence 001469999999999998764 5788888888766554211100 000 00 0000
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. .+ ....++++++|++++++.++...
T Consensus 205 ----~-~~------~~~~~~~~~~dva~~~~~l~~~~ 230 (248)
T PRK07806 205 ----A-RR------EAAGKLYTVSEFAAEVARAVTAP 230 (248)
T ss_pred ----H-HH------hhhcccCCHHHHHHHHHHHhhcc
Confidence 0 00 01136899999999999888743
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.5e-06 Score=99.48 Aligned_cols=193 Identities=16% Similarity=0.058 Sum_probs=126.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH----------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF----------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf----------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
.-+||+.+.-|..+.++|.+.....+. +.+.+.....-.++.++.+|++++ ++++.++
T Consensus 58 vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~ 131 (300)
T PRK06128 58 ALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE------AFCRQLVERAVKE 131 (300)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCH------HHHHHHHHHHHHH
Confidence 347899999999999999874222111 111111111234678899999997 6665554
Q ss_pred -CCccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 -EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 -~~VDiViH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.++|+|||+|+... + .+.++..+++|+.|+..+++.+... ..-.++|++||..++....
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 200 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP----------- 200 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC-----------
Confidence 36899999999642 1 1235678999999999999999752 2225899999987653210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||++.+.+++.++ .|+.+.+++|+.|.++..... . .
T Consensus 201 ---------------------------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~--~---~ 248 (300)
T PRK06128 201 ---------------------------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG--G---Q 248 (300)
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC--C---C
Confidence 01259999999999887664 589999999999998753211 0 0
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
....+..+..+ .....+...+|++++++.++..
T Consensus 249 --~~~~~~~~~~~---------~p~~r~~~p~dva~~~~~l~s~ 281 (300)
T PRK06128 249 --PPEKIPDFGSE---------TPMKRPGQPVEMAPLYVLLASQ 281 (300)
T ss_pred --CHHHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCc
Confidence 01112222211 1123467889999998877654
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.1e-06 Score=96.88 Aligned_cols=189 Identities=12% Similarity=0.074 Sum_probs=122.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.=.||+.+.-|....+.|.+..... +. ..+.++......++..+.+|++++ ++++.+++
T Consensus 9 vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 9 AIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDP------DSAKAMADATVSAFG 82 (250)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHhC
Confidence 3478888888999998887632110 00 111111111123577899999998 66655443
Q ss_pred CccEEEEcCccCCc-------c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 DVNIVFHVAATVKF-------D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|+|||+|+.... + +.++..+++|+.|+.++++++.+. .+-.+||++||..++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 151 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY----------- 151 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-----------
Confidence 57999999997421 1 123467889999999999998753 23468999999765321
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
.+.|+.||++.|.+++.+. .++++.+++|+.+..+.....
T Consensus 152 ------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~----- 196 (250)
T PRK07774 152 ------------------------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV----- 196 (250)
T ss_pred ------------------------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc-----
Confidence 1359999999999887764 478999999988776643211
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+..+...+..+... .-+..++|++++++.++..
T Consensus 197 ---~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~~~~~ 230 (250)
T PRK07774 197 ---TPKEFVADMVKGIPL---------SRMGTPEDLVGMCLFLLSD 230 (250)
T ss_pred ---CCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCh
Confidence 112233333333211 1245689999999887654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.5e-07 Score=100.79 Aligned_cols=154 Identities=12% Similarity=0.037 Sum_probs=105.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHH----hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDR----LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~----Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
.=+||+.+.-|....++|.+.... -+.++ ..+.......++.++.+|++++ +++..++ ..+|
T Consensus 13 vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 13 ALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADE------AQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred EEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH------HHHHHHHHHHHHHhCCCC
Confidence 348999999999999999874322 11111 1111112234688999999997 5554433 3479
Q ss_pred EEEEcCccCCcc---------cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKFD---------EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f~---------e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+||..... +.++..+++|+.|+.++++++... ....++|++||....... +
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~----------~---- 152 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE----------P---- 152 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC----------C----
Confidence 999999975321 124578999999999999999641 223579999987542210 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCC
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~ 205 (1217)
..+.|+.||+..|.+++.++ .++.+..++|+.+.++.
T Consensus 153 ------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 153 ------------------------DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred ------------------------CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 11469999999998887654 46899999999998864
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.6e-06 Score=95.36 Aligned_cols=189 Identities=12% Similarity=0.073 Sum_probs=123.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-----------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-----------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR---- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-----------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---- 71 (1217)
.-+||+.+.-|....++|.+.-.+. +. ..+.++......++.++.+|++++ ++++.++
T Consensus 9 ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~ 82 (249)
T PRK12827 9 VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDF------AATRAALDAGV 82 (249)
T ss_pred EEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHH
Confidence 4578899888998888888732221 11 111111122235688999999998 6666554
Q ss_pred ---CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhH-h---cCCCCeEEEEcCccccccccccccccc
Q psy13944 72 ---EDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAE-E---MKNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 72 ---~~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk-~---~~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
..+|+|||+|+.... . +.+...+++|+.|+.++++++. . -.+..++|++||...+....
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------- 155 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNR------- 155 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCC-------
Confidence 468999999997541 1 1245678999999999999997 1 13557899999975533210
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
.-..|+.+|+..+.+++..+ .+++++++||+.+.++......
T Consensus 156 -------------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~-- 202 (249)
T PRK12827 156 -------------------------------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA-- 202 (249)
T ss_pred -------------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--
Confidence 01359999999988877654 4899999999999987543210
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+.. .+... . ....+.+++|++++++.++..
T Consensus 203 ------~~~---~~~~~----~-----~~~~~~~~~~va~~~~~l~~~ 232 (249)
T PRK12827 203 ------PTE---HLLNP----V-----PVQRLGEPDEVAALVAFLVSD 232 (249)
T ss_pred ------hHH---HHHhh----C-----CCcCCcCHHHHHHHHHHHcCc
Confidence 010 11111 0 111256889999998876643
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.3e-07 Score=100.98 Aligned_cols=154 Identities=14% Similarity=0.106 Sum_probs=109.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhh-cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRK-ENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~-~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH 79 (1217)
.=+||+.+.-|....++|.+... .+.-.-|. .......+++++.+|++++ ++++.+++ .+|+|||
T Consensus 7 vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 7 ALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIPGVELLELDVTDD------ASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred EEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccCCCeeEEeecCCH------HHHHHHHHHHHHhCCCCCEEEE
Confidence 44789999999999999987422 22211111 1112245788999999998 77776665 4699999
Q ss_pred cCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh---cCCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 80 VAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 80 ~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
+||..... +..+..+++|+.|+.++++.+.. -.+..++|++||...+.. .|
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~--------- 140 (270)
T PRK06179 80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP----------AP--------- 140 (270)
T ss_pred CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC----------CC---------
Confidence 99975321 23457899999999999888532 136689999999755321 10
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
.-..|+.||+..|.+++... .+++++++||+.+.++..
T Consensus 141 -------------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 141 -------------------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred -------------------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 01369999999998877653 689999999999888754
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.6e-06 Score=95.58 Aligned_cols=197 Identities=10% Similarity=0.051 Sum_probs=124.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH----HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF----DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-.||+.+.-|....++|.+.... .+. +. +.+.......++.++.+|++++ ++++.+++
T Consensus 6 ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 6 AIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR------DSVDTAVAAAEQALG 79 (250)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 347888888899999888873211 111 11 1111111234688999999987 66665543
Q ss_pred CccEEEEcCccCC---c-cc---CHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVK---F-DE---HFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~---f-~e---~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
++|+|||+|+... + +. .++..+++|+.|+.++++.+... .+..++|++||..++....
T Consensus 80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~------------ 147 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS------------ 147 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC------------
Confidence 5899999998642 1 11 23467899999999998887521 2457899999986654211
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.+|++.|.+++.++ .++++.++||+.++++......++. .
T Consensus 148 --------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~ 198 (250)
T TIGR03206 148 --------------------------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---E 198 (250)
T ss_pred --------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---C
Confidence 01359999988888877654 4899999999999887533221211 1
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+..+...+..... ...+...+|++++++.++..
T Consensus 199 ~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~ 232 (250)
T TIGR03206 199 NPEKLREAFTRAIP---------LGRLGQPDDLPGAILFFSSD 232 (250)
T ss_pred ChHHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCc
Confidence 12223222222211 11245678999999887654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.7e-07 Score=100.79 Aligned_cols=66 Identities=17% Similarity=0.093 Sum_probs=48.0
Q ss_pred HHhcCccEEEEcCccccchh-----cHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEEccceeecCcc--ccccc
Q psy13944 572 VLREDVNIVFHVAATVKFDE-----HFQTAFEINCKGTEKLLKMAEEMKNL--DSFIYVSTAYSNCNIK--KIEEK 638 (1217)
Q Consensus 572 ~L~~~vdvVfH~AA~v~f~~-----~~~~~~~~NV~GT~nLLelA~~~~~l--k~fV~vSTa~v~g~~~--~I~E~ 638 (1217)
..+.++|+|||+||...+.. ......++|+.||.+|+++|++. +. ..|++.||+++||... +++|+
T Consensus 53 ~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~~~~~~E~ 127 (292)
T TIGR01777 53 EALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSEDRVFTEE 127 (292)
T ss_pred hhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCCCCCcCcc
Confidence 34578999999999755422 23357789999999999999987 44 4677788888888532 34444
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.5e-06 Score=96.61 Aligned_cols=195 Identities=10% Similarity=0.016 Sum_probs=125.8
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcCh-hH----HHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADD-AF----DRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
...-+||+.+.-|....++|.+..-.. +. +.++ +.......++.++.+|++++ ++++.+++
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~ 84 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDH------DAVRAAIDAFEAE 84 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCH------HHHHHHHHHHHHh
Confidence 345689999999999999998732111 01 1111 11111123578899999998 77766654
Q ss_pred --CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 --DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 --~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++++.+. ....++|++||...... .+
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------~~ 154 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA----------RP 154 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC----------CC
Confidence 479999999975321 223567889999999999988642 24568999999643211 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
.-..|+.+|...|.+++.++ .++++.++||+.+.++...... .
T Consensus 155 ----------------------------~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~---~- 202 (255)
T PRK07523 155 ----------------------------GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV---A- 202 (255)
T ss_pred ----------------------------CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc---c-
Confidence 01369999999999887664 5899999999998887532210 0
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ......+... .....+..++|+|++++.++..
T Consensus 203 --~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 235 (255)
T PRK07523 203 --D-PEFSAWLEKR---------TPAGRWGKVEELVGACVFLASD 235 (255)
T ss_pred --C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 0 1111111111 1123467899999998887754
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.7e-06 Score=96.40 Aligned_cols=192 Identities=17% Similarity=0.157 Sum_probs=122.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HH---HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FD---RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd---~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-++|+.+.-|..+.++|.+..... + -+ .+.+.......++.++.+|++++ +.+..+++
T Consensus 4 vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 4 VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDA------EACERLIEAAVARFG 77 (263)
T ss_pred EEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHcC
Confidence 3467888888888888886532110 0 01 11111111234688899999998 66665544
Q ss_pred CccEEEEcCccCCc---ccC-----HHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF---DEH-----FQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~e~-----l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
++|+|||+|+.... .+. +...+++|+.|+.++++.+... .+..++|++||...+....
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 145 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP------------ 145 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC------------
Confidence 68999999997532 111 3467899999999999998531 2346899999976543210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..|.+.+.+. .++.+.+++|+.+..+......
T Consensus 146 --------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~------- 192 (263)
T PRK06181 146 --------------------------TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRAL------- 192 (263)
T ss_pred --------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhc-------
Confidence 01369999999998886643 5899999999888765322100
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ..+.. ....+....++++++|+|++++.++..
T Consensus 193 ~--------~~~~~--~~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 193 D--------GDGKP--LGKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred c--------ccccc--cccccccccCCCCHHHHHHHHHHHhhC
Confidence 0 00110 001112234789999999999988864
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.5e-06 Score=95.87 Aligned_cols=156 Identities=14% Similarity=0.127 Sum_probs=103.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+.....+ ...+.........++.++.+|++++ +++..+++
T Consensus 5 ~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~ 78 (248)
T PRK06123 5 MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE------ADVLRLFEAVDREL 78 (248)
T ss_pred EEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCH------HHHHHHHHHHHHHh
Confidence 34788888888888888876321111 0011111111124578899999997 66666554
Q ss_pred -CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc-C-C----CCeEEEEcCccccccccccccccc
Q psy13944 73 -DVNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM-K-N----LDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 -~VDiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~-~-~----lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|+|||+|+.... . +.+...+++|+.|+.++++.+.+. . + -.++|++||..+...
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------- 149 (248)
T PRK06123 79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG--------- 149 (248)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC---------
Confidence 57999999987531 1 123477999999999998887542 1 1 136999999754211
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
.+ .....|+.||+..|.+++.++ +++++.++||+.|+++..
T Consensus 150 -~~---------------------------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~ 195 (248)
T PRK06123 150 -SP---------------------------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIH 195 (248)
T ss_pred -CC---------------------------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchh
Confidence 00 000249999999999887654 589999999999999853
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.8e-06 Score=94.55 Aligned_cols=152 Identities=14% Similarity=0.085 Sum_probs=102.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
.=.||+.+.-|....++|.+.... -+.+ .+.++......++.++.+|++++ ++...+++ .
T Consensus 11 vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 11 VVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETY------AGAQAAMAAAVEAFGR 84 (260)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCH------HHHHHHHHHHHHHcCC
Confidence 347899999999999999873221 1111 11111112234678899999997 65555443 5
Q ss_pred ccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|++||+|+... + .+.+...+++|+.|+..+++.+.. + .+..++|++||...++..
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------- 151 (260)
T PRK12823 85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN------------- 151 (260)
T ss_pred CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC-------------
Confidence 799999998531 1 122456788999988866655442 1 244689999997653210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
...|+.||++.|.+++.++ .++++.+++|+.|+++.
T Consensus 152 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 152 ---------------------------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred ---------------------------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 1259999999999887764 58999999999999973
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.1e-07 Score=105.78 Aligned_cols=72 Identities=15% Similarity=0.211 Sum_probs=56.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc----CccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE----DVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~----~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
.+++++.||++|++ +++.+++ ++|+||||||...- .....+++|+.|+.+++++|++. ++++||++|
T Consensus 111 ~~v~~v~~Dl~d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iS 181 (390)
T PLN02657 111 PGAEVVFGDVTDAD------SLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLS 181 (390)
T ss_pred CCceEEEeeCCCHH------HHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 36889999999864 5666665 59999999985321 12345678999999999999987 789999999
Q ss_pred cceee
Q psy13944 625 TAYSN 629 (1217)
Q Consensus 625 Ta~v~ 629 (1217)
|.+++
T Consensus 182 S~~v~ 186 (390)
T PLN02657 182 AICVQ 186 (390)
T ss_pred ecccc
Confidence 98764
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.4e-06 Score=94.24 Aligned_cols=199 Identities=14% Similarity=0.029 Sum_probs=126.3
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcC-hhH----HHhhhcCc--ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFAD-DAF----DRLRKENA--NFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr~~~p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
+.=+||+.+.-|..+.++|.+.... -+. +.+.+... ....++.++.+|++++ ++++.+++
T Consensus 7 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 7 VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA------EAVEALVDFVAARWG 80 (252)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 3568899999999999998873211 011 11110000 0124588999999998 66665543
Q ss_pred CccEEEEcCccCCc----ccC---HHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF----DEH---FQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~e~---l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+|+.... ..+ ++..+++|+.|+.++.+.+. + .+..+||++||....... +
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~ii~~sS~~~~~~~----------~- 148 (252)
T PRK06138 81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQR-QGGGSIVNTASQLALAGG----------R- 148 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh-cCCeEEEEECChhhccCC----------C-
Confidence 68999999997532 122 34678999999987776653 3 356799999997542210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
..+.|+.+|+..|.+++.++ .+++++++||+.++++.......+...
T Consensus 149 ---------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~- 200 (252)
T PRK06138 149 ---------------------------GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHAD- 200 (252)
T ss_pred ---------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccC-
Confidence 01469999999999887764 489999999999988864332222111
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
+..+ .....+ ......+++++|++++++.++....
T Consensus 201 --~~~~-~~~~~~--------~~~~~~~~~~~d~a~~~~~l~~~~~ 235 (252)
T PRK06138 201 --PEAL-REALRA--------RHPMNRFGTAEEVAQAALFLASDES 235 (252)
T ss_pred --hHHH-HHHHHh--------cCCCCCCcCHHHHHHHHHHHcCchh
Confidence 1111 111111 0111237889999999998775533
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.9e-06 Score=95.82 Aligned_cols=200 Identities=16% Similarity=0.122 Sum_probs=127.6
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcChh-HH------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFADDA-FD------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~~v-fd------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
..-+||+.+.-|....++|.+.....+ .+ .+.++......++.++.+|++++ +++..+++
T Consensus 9 ~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 9 VVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDD------AQCRDAVEQTVAKFG 82 (258)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCH------HHHHHHHHHHHHhcC
Confidence 355889999999999999986332110 00 11111111234688999999998 66665553
Q ss_pred CccEEEEcCccCC---cc---cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 73 DVNIVFHVAATVK---FD---EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 73 ~VDiViH~AA~v~---f~---e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
.+|+|||+|+... +. +.++..+++|+.|+.++++.+.+. ....+||++||...... .+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~---- 148 (258)
T PRK08628 83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG----------QG---- 148 (258)
T ss_pred CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC----------CC----
Confidence 5799999999632 22 335578899999999998887542 22358999999654211 00
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||+..|.+++..+ .++.+..+||+.|+++...+ |...+..+
T Consensus 149 ------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~ 201 (258)
T PRK08628 149 ------------------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN---WIATFDDP 201 (258)
T ss_pred ------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH---HhhhccCH
Confidence 01369999999999998764 57999999999999874322 22222211
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
......+... .+ ....++..+|++++++.++...
T Consensus 202 ~~~~~~~~~~----~~----~~~~~~~~~dva~~~~~l~~~~ 235 (258)
T PRK08628 202 EAKLAAITAK----IP----LGHRMTTAEEIADTAVFLLSER 235 (258)
T ss_pred HHHHHHHHhc----CC----ccccCCCHHHHHHHHHHHhChh
Confidence 1111111111 11 0124688999999998877654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.9e-06 Score=92.77 Aligned_cols=190 Identities=15% Similarity=0.132 Sum_probs=121.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.=.||+.+.-|..+.++|.+.-.. .+. +.+.........++.++.+|++++ +++..+++
T Consensus 8 ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 8 ALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE------AAVRALIEAAVEAFG 81 (246)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH------HHHHHHHHHHHHHhC
Confidence 447888888888888888763221 001 111111112234688999999988 65554443
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh---cCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+||..... +.+...++.|+.|+.++++.+.. ..+.++||++||...... .
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~----------~--- 148 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG----------N--- 148 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC----------C---
Confidence 469999999886432 12456788999999999988842 135579999999643211 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.....|+.+|...|.+++.+. .++.++++||+.++++...+.
T Consensus 149 -------------------------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~-------- 195 (246)
T PRK05653 149 -------------------------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL-------- 195 (246)
T ss_pred -------------------------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh--------
Confidence 001359999998888877654 578999999999988753210
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
........... + ....++.++|+++++..++.
T Consensus 196 -~~~~~~~~~~~----~-----~~~~~~~~~dva~~~~~~~~ 227 (246)
T PRK05653 196 -PEEVKAEILKE----I-----PLGRLGQPEEVANAVAFLAS 227 (246)
T ss_pred -hHHHHHHHHhc----C-----CCCCCcCHHHHHHHHHHHcC
Confidence 01111111111 1 12457889999999887764
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.1e-06 Score=96.56 Aligned_cols=193 Identities=15% Similarity=0.123 Sum_probs=124.1
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcC-hhHH----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEE
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFAD-DAFD----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVF 78 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~-~vfd----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiVi 78 (1217)
..-++|+.+.-|....+++.+.... .+.+ .+.+... ..+..++.+|++++ +++..+++ .+|+||
T Consensus 11 ~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~------~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 11 SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG--ETGCEPLRLDVGDD------AAIRAALAAAGAFDGLV 82 (245)
T ss_pred EEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCeEEEecCCCH------HHHHHHHHHhCCCCEEE
Confidence 4568999999999999988763221 1111 1111001 11356788999987 56655554 589999
Q ss_pred EcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---C-CCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 79 HVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---K-NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 79 H~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~-~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
|+|+..... +.++..+.+|+.|+.++++.+.+. + ...+||++||...+....
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------------- 145 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP----------------- 145 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC-----------------
Confidence 999975321 234467789999999999988653 1 135899999975532210
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
....|+.||..+|.+++.++ .+++++.+||+.+.++..... |.+ +..
T Consensus 146 ---------------------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~--~~~----~~~- 197 (245)
T PRK07060 146 ---------------------DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEA--WSD----PQK- 197 (245)
T ss_pred ---------------------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhh--ccC----HHH-
Confidence 01469999999999887764 479999999999988753211 211 111
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
...+... .....+++++|++++++.++...
T Consensus 198 ~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~ 227 (245)
T PRK07060 198 SGPMLAA---------IPLGRFAEVDDVAAPILFLLSDA 227 (245)
T ss_pred HHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcc
Confidence 1111111 11234899999999998877543
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.3e-06 Score=91.54 Aligned_cols=194 Identities=13% Similarity=0.079 Sum_probs=122.1
Q ss_pred cCCCcccCCCCCCcccHHHHHHHHhcCh-hH--------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 5 RGKLGHNGAKTCKHNSILWVAKDFFADD-AF--------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 5 ~g~~g~tg~r~kkg~~~~eRL~~~l~~~-vf--------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
.++.=.||+.+.-|..+.++|.+..... +. ..+..+......++.++.+|++++ +++..+++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~ 78 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA------ESVERAVDEAK 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHH
Confidence 3455688999999999999988632111 00 011111111235788999999998 66655443
Q ss_pred ----CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 ----DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ----~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
++|+|||+|+..... +.+...+.+|+.|+.++++.+... ...++||++||.......
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~--------- 149 (248)
T PRK05557 79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN--------- 149 (248)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC---------
Confidence 679999999975321 124467889999999999888653 244689999996432110
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
+ ....|+.+|++.|.+++.+. .+++++++||+.+.++...+.
T Consensus 150 -~----------------------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---- 196 (248)
T PRK05557 150 -P----------------------------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---- 196 (248)
T ss_pred -C----------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc----
Confidence 0 01469999999998776543 588999999988755432221
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
...+......+ .....+++++|+++++..++..
T Consensus 197 -----~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~ 229 (248)
T PRK05557 197 -----PEDVKEAILAQ---------IPLGRLGQPEEIASAVAFLASD 229 (248)
T ss_pred -----ChHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 11111111111 1112367899999998776543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.9e-06 Score=94.37 Aligned_cols=150 Identities=14% Similarity=0.142 Sum_probs=103.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+.... +-.+.+++.. ..++.++.+|++++ ++++.+++ ++|
T Consensus 6 vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~---~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~~~id 76 (273)
T PRK06182 6 ALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA---SLGVHPLSLDVTDE------ASIKAAVDTIIAEEGRID 76 (273)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hCCCeEEEeeCCCH------HHHHHHHHHHHHhcCCCC
Confidence 447899999999999999763221 1122222211 13588999999998 77766654 689
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHH----HHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKL----LKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~L----LelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+|+..... +.++..+++|+.|+..+ +..+++ .+..++|++||...... .
T Consensus 77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~-~~~g~iv~isS~~~~~~----------~----- 140 (273)
T PRK06182 77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRA-QRSGRIINISSMGGKIY----------T----- 140 (273)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHh-cCCCEEEEEcchhhcCC----------C-----
Confidence 999999975321 23457889999996554 445554 34568999999653211 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.....|+.||+..+.+.+..+ .++++.++||+.|.++.
T Consensus 141 -----------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 141 -----------------------PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred -----------------------CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 011359999999998865432 68999999999998764
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.4e-06 Score=93.70 Aligned_cols=200 Identities=16% Similarity=0.086 Sum_probs=127.9
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--cccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEEc
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--ANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFHV 80 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH~ 80 (1217)
+..-.+|+.+.-|....++|.+.....+.-.-|... .+...++.++.+|++++ +++..+++ .+|+|||+
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDP------ASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCH------HHHHHHHHhcCCCCEEEEC
Confidence 345689999999999999998754312221111110 11235789999999998 67666655 58999999
Q ss_pred Ccc-CC---c----ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 81 AAT-VK---F----DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 81 AA~-v~---f----~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
|+. .. + .+.+...+++|+.|+.++++++.+. .+..+||++||...+...
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-------------------- 140 (238)
T PRK08264 81 AGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-------------------- 140 (238)
T ss_pred CCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC--------------------
Confidence 997 21 1 1234467889999999999987531 245689999997653321
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
...+.|+.||..+|.+.+.++ .++++.++||+.+.++.....++- ...+..+..
T Consensus 141 ------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~---~~~~~~~a~ 199 (238)
T PRK08264 141 ------------------PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAP---KASPADVAR 199 (238)
T ss_pred ------------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCcC---CCCHHHHHH
Confidence 012469999999998887654 489999999999977643322221 111122222
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+..+.. ...+.+.++++++.++.+...
T Consensus 200 ~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~ 227 (238)
T PRK08264 200 QILDALE--------AGDEEVLPDEMARQVKAALSA 227 (238)
T ss_pred HHHHHHh--------CCCCeEeccHHHHHHHHHhhc
Confidence 2222111 113567778888887776543
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.6e-06 Score=94.55 Aligned_cols=184 Identities=12% Similarity=0.098 Sum_probs=121.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHH----hhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDR----LRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~----Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
.-++|+.+.-|..+.++|.+-... .+.++ ..+... .....+.++.+|+.+. +++..+++ ++
T Consensus 10 vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 10 VAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP------QAARRAVDEVNRQFGRL 83 (239)
T ss_pred EEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH------HHHHHHHHHHHHHhCCc
Confidence 458899999999999998764221 11111 100000 1123567888999987 66655544 68
Q ss_pred cEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 75 NIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 75 DiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
|+|||+|+.... . +.+...+++|+.|+.++++++.+. .+.+++|++||...++...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 149 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP-------------- 149 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC--------------
Confidence 999999986432 1 223467889999999999887531 3578999999986543210
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
. -..|+.+|+..+.+++... .++++.++||+.++++..... . +
T Consensus 150 -----------------------~-~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------~--~ 197 (239)
T PRK12828 150 -----------------------G-MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------M--P 197 (239)
T ss_pred -----------------------C-cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------C--C
Confidence 0 0359999998888876553 589999999999998732110 0 0
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. .....+++++|++++++.++...
T Consensus 198 ~------------------~~~~~~~~~~dva~~~~~~l~~~ 221 (239)
T PRK12828 198 D------------------ADFSRWVTPEQIAAVIAFLLSDE 221 (239)
T ss_pred c------------------hhhhcCCCHHHHHHHHHHHhCcc
Confidence 0 01122799999999988777643
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.3e-06 Score=91.28 Aligned_cols=187 Identities=13% Similarity=0.130 Sum_probs=115.8
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhH-----HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAF-----DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vf-----d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
.+|+.+.-|..+.++|.+-.-. .+. +. +.+.....-.++.++.+|++++ ++++.+++ .
T Consensus 3 ItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01830 3 VTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR------EDVKAVVEEIEEELGP 76 (239)
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHHHHHHHhCC
Confidence 4667777777777777653111 011 11 1111111123578999999998 66665543 4
Q ss_pred ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccc-ccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+|+..... +..+..+++|+.|+.++++.|... ....+||++||... +|..
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~------------- 143 (239)
T TIGR01830 77 IDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA------------- 143 (239)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-------------
Confidence 69999999985321 234578889999999999988642 34569999999643 2210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.+|+..|.+++... .++++.++||+.+.++...+.+
T Consensus 144 --------------------------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~------- 190 (239)
T TIGR01830 144 --------------------------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS------- 190 (239)
T ss_pred --------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC-------
Confidence 01369999998888776543 6899999999987654322110
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
..+....... .. ..-+.+++|++++++.++.
T Consensus 191 --~~~~~~~~~~-~~--------~~~~~~~~~~a~~~~~~~~ 221 (239)
T TIGR01830 191 --EKVKKKILSQ-IP--------LGRFGTPEEVANAVAFLAS 221 (239)
T ss_pred --hHHHHHHHhc-CC--------cCCCcCHHHHHHHHHHHhC
Confidence 1111111111 10 1125678999999987774
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.7e-06 Score=94.04 Aligned_cols=199 Identities=12% Similarity=0.069 Sum_probs=126.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH~ 80 (1217)
.-.||+.+.-|....++|.+.... +.-..+...+....++.++.+|++++ +++..+++ .+|+|||+
T Consensus 11 vlItGas~~iG~~la~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ 83 (252)
T PRK08220 11 VWVTGAAQGIGYAVALAFVEAGAK-VIGFDQAFLTQEDYPFATFVLDVSDA------AAVAQVCQRLLAETGPLDVLVNA 83 (252)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCE-EEEEecchhhhcCCceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEEC
Confidence 457899999999999999763222 11111111112245688999999998 67766654 47999999
Q ss_pred CccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 81 AATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 81 AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
|+..... +.++..+++|+.|+..+++.+... ....++|++||.......
T Consensus 84 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~--------------------- 142 (252)
T PRK08220 84 AGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR--------------------- 142 (252)
T ss_pred CCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC---------------------
Confidence 9975421 234578999999999999987531 234589999997542110
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc-ccchhHHHHH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK-GMNGLTAMYV 224 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid-n~~g~~~li~ 224 (1217)
.....|+.||+..|.+++.+. .++.+.+++|+.+.++.......... ......+...
T Consensus 143 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~ 205 (252)
T PRK08220 143 -----------------IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPE 205 (252)
T ss_pred -----------------CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHH
Confidence 001469999999999987664 57999999999999885422100000 0000000111
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.... .....+++.++|++++++.++..
T Consensus 206 ~~~~---------~~~~~~~~~~~dva~~~~~l~~~ 232 (252)
T PRK08220 206 QFKL---------GIPLGKIARPQEIANAVLFLASD 232 (252)
T ss_pred HHhh---------cCCCcccCCHHHHHHHHHHHhcc
Confidence 1111 11234689999999999887754
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.9e-06 Score=92.21 Aligned_cols=186 Identities=14% Similarity=0.147 Sum_probs=122.6
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcCh-hH----HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFADD-AF----DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
..-+||+.+.-|..+.++|.+..... +. +. +.++......++.++.+|++++ +++..+++
T Consensus 9 ~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 82 (239)
T PRK07666 9 NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY------EEVTAAIEQLKNEL 82 (239)
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCH------HHHHHHHHHHHHHc
Confidence 34578888888999999887632211 01 11 1111111234788999999998 66665554
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+|+..... +.++..+++|+.|+.++++.+... .+..++|++||...+....
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------- 151 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA----------- 151 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC-----------
Confidence 689999999874321 224577899999999998887531 3457899999975432210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.+|++.+.+++.+. .++++.++||+.+..+......
T Consensus 152 ---------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------ 198 (239)
T PRK07666 152 ---------------------------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG------ 198 (239)
T ss_pred ---------------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc------
Confidence 11469999999888876543 5899999999988876432110
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
... .....++..+|+|++++.++...
T Consensus 199 ---------~~~----------~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 199 ---------LTD----------GNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred ---------ccc----------cCCCCCCCHHHHHHHHHHHHhCC
Confidence 000 01124688999999999888653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.2e-06 Score=94.78 Aligned_cols=193 Identities=12% Similarity=0.063 Sum_probs=125.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH--------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF--------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf--------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|..+.++|.+..... +. +.+.........++.++.+|+++. ++++.+++
T Consensus 49 iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~i~~~~ 122 (290)
T PRK06701 49 ALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDE------AFCKDAVEETVREL 122 (290)
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCH------HHHHHHHHHHHHHc
Confidence 3478888889999999998632211 11 111111111124688999999997 66655543
Q ss_pred -CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 -DVNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 -~VDiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+.... . +.+...+++|+.|+.++++++.+. ....++|++||..++....
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~------------ 190 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE------------ 190 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC------------
Confidence 57999999996422 1 123468999999999999998752 2335899999986643211
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
. ...|+.||+..+.+++.++ .++++..+||+.|..+.... ...
T Consensus 191 -------------------------~-~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~------~~~ 238 (290)
T PRK06701 191 -------------------------T-LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS------DFD 238 (290)
T ss_pred -------------------------C-cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc------ccC
Confidence 0 1359999999999887765 48999999999988764321 011
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
...+..+.. ......+..++|++++++.++...
T Consensus 239 --~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll~~~ 271 (290)
T PRK06701 239 --EEKVSQFGS---------NTPMQRPGQPEELAPAYVFLASPD 271 (290)
T ss_pred --HHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHcCcc
Confidence 111111111 112345789999999998877643
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.4e-06 Score=94.38 Aligned_cols=184 Identities=13% Similarity=0.066 Sum_probs=114.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcC---cccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEEcC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKEN---ANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFHVA 81 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~---p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH~A 81 (1217)
=++|+.+.-|..+.++|.+- .+ .+.++-.... ......++++.+|++++ +++..+++ ++|+|||+|
T Consensus 7 lVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~a 79 (227)
T PRK08219 7 LITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDP------EAIAAAVEQLGRLDVLVHNA 79 (227)
T ss_pred EEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCH------HHHHHHHHhcCCCCEEEECC
Confidence 36788888888888888765 32 1111100100 01123578999999998 77777765 589999999
Q ss_pred ccCCcc-------cCHHHHHHHHHHHHH----HHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 82 ATVKFD-------EHFQTAFEINCKGTE----KLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 82 A~v~f~-------e~l~~a~~vNV~GT~----~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
+..... +.+...+++|+.++. .+++.+++ ...++|++||..+++...
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~v~~ss~~~~~~~~-------------------- 137 (227)
T PRK08219 80 GVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA--AHGHVVFINSGAGLRANP-------------------- 137 (227)
T ss_pred CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCeEEEEcchHhcCcCC--------------------
Confidence 975321 124456889999954 45554544 346899999976543210
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CC-CCEEEEecceeccCCCCCCcccccccchhHHHHHHH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DK-LPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV 226 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~g-LPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~ 226 (1217)
....|+.+|...|.++.... .+ +++..++|+.+.++... .+...
T Consensus 138 ------------------~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-------------~~~~~- 185 (227)
T PRK08219 138 ------------------GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR-------------GLVAQ- 185 (227)
T ss_pred ------------------CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh-------------hhhhh-
Confidence 01359999999998877654 34 77777887754433110 01000
Q ss_pred hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 227 GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 227 ~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.+ .......+++++|++++++.++.++
T Consensus 186 -~~-------~~~~~~~~~~~~dva~~~~~~l~~~ 212 (227)
T PRK08219 186 -EG-------GEYDPERYLRPETVAKAVRFAVDAP 212 (227)
T ss_pred -hc-------cccCCCCCCCHHHHHHHHHHHHcCC
Confidence 01 0112246899999999999887653
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.3e-07 Score=99.67 Aligned_cols=200 Identities=12% Similarity=0.048 Sum_probs=119.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH----HhhhcCc---c-c-CCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD----RLRKENA---N-F-TERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd----~Lr~~~p---~-~-~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
.-+||+.+.-|....++|.+.-.. -+.+ .+++... . . ..++.++.+|++++ +++..++
T Consensus 5 ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~i~~~~~~~~~~ 78 (259)
T PRK12384 5 AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE------QSVLALSRGVDEI 78 (259)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCH------HHHHHHHHHHHHH
Confidence 346888888888888888763211 1111 1111000 0 1 13688999999987 6655444
Q ss_pred -CCccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCccc-ccccccccccccC
Q psy13944 72 -EDVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYS-NCNIKKIEEKFYE 138 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v-~g~~~~I~E~~y~ 138 (1217)
..+|+|||+|+.... + +.++..+++|+.|+..+++.+.+. .+ -.++|++||... ++.
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---------- 148 (259)
T PRK12384 79 FGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS---------- 148 (259)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC----------
Confidence 357999999986431 1 234577899999999888777542 23 358999999542 111
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
+ .-..|+.||++.+.+++.+. .++++.++||+.++++.... +
T Consensus 149 -~----------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~-- 195 (259)
T PRK12384 149 -K----------------------------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--S-- 195 (259)
T ss_pred -C----------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--h--
Confidence 0 01369999999888776653 78999999999887653210 0
Q ss_pred cccchhHHHHHHHhc--CceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGL--GIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~--G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ...+...... +.......++.....+++.+|++++++.++..
T Consensus 196 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~ 240 (259)
T PRK12384 196 --L--LPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP 240 (259)
T ss_pred --h--hHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence 0 0000000000 00000111223446788999999999877543
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.6e-06 Score=93.33 Aligned_cols=200 Identities=17% Similarity=0.165 Sum_probs=124.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.=+||+.+.-|....++|.+..... +. +.+.++......++.++.+|++++ ++++.++ .
T Consensus 8 vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g 81 (258)
T PRK07890 8 VVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE------DQCANLVALALERFG 81 (258)
T ss_pred EEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH------HHHHHHHHHHHHHcC
Confidence 3378888888888888887632210 00 111111111134688999999998 6665544 4
Q ss_pred CccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+... + .+.+...+++|+.|+..+++++.+. +...++|++||.....+. +
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----------~-- 149 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ----------P-- 149 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC----------C--
Confidence 5799999998642 1 1234578999999999999998642 122589999997542210 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
..+.|+.+|...|.+++.++ .++++.++||+.++++...+...+.....
T Consensus 150 --------------------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~ 203 (258)
T PRK07890 150 --------------------------KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKY 203 (258)
T ss_pred --------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhccccc
Confidence 01469999999999988765 48999999999999985322111100000
Q ss_pred h--hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 G--LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g--~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+ ...+....... .....+..++|++++++.++..
T Consensus 204 ~~~~~~~~~~~~~~---------~~~~~~~~~~dva~a~~~l~~~ 239 (258)
T PRK07890 204 GVTVEQIYAETAAN---------SDLKRLPTDDEVASAVLFLASD 239 (258)
T ss_pred CCCHHHHHHHHhhc---------CCccccCCHHHHHHHHHHHcCH
Confidence 0 01111111111 1123478899999999877754
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.2e-06 Score=109.11 Aligned_cols=198 Identities=18% Similarity=0.167 Sum_probs=126.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH----H---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD----R---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd----~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+.... .+.+ . +.++.... .++.++.+|++++ +++..+++
T Consensus 425 vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~------~~v~~~~~~~~~~~g 497 (681)
T PRK08324 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDE------AAVQAAFEEAALAFG 497 (681)
T ss_pred EEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCH------HHHHHHHHHHHHHcC
Confidence 348898889999999998864222 1111 1 11111111 4788999999997 66655443
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCC-CeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNL-DSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||.... .+.++..+++|+.|+..+++.+.+. .+. .+||++||..+... .+
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~----------~~- 566 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP----------GP- 566 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC----------CC-
Confidence 68999999996421 1234578899999999998877532 232 58999999654221 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceec-cCCCCCCcccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVM-PVVEEPCPMWVKG 215 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~-G~~~eP~pGWidn 215 (1217)
.-..|+.||+..|.+++.++ .++++.+++|+.|| ++.... ++|...
T Consensus 567 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~-~~~~~~ 618 (681)
T PRK08324 567 ---------------------------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT-GEWIEA 618 (681)
T ss_pred ---------------------------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc-chhhhh
Confidence 01369999999999998764 47999999999998 542110 112110
Q ss_pred cchhHHHHHHHhcCcee----EEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 216 MNGLTAMYVAVGLGIMR----TVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~----~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
.....|... ..+.++....++++++|+|++++.++.
T Consensus 619 --------~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s 658 (681)
T PRK08324 619 --------RAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLAS 658 (681)
T ss_pred --------hhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhC
Confidence 011111111 012334556789999999999988764
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.3e-06 Score=92.76 Aligned_cols=192 Identities=14% Similarity=0.067 Sum_probs=118.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh------HHHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA------FDRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v------fd~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
=+||+.+.-|....++|.+.....+ -+.+. .+......++..+.+|++++ ++++.+++
T Consensus 5 lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 5 LVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDE------NQVVAMFTAIDQHDE 78 (247)
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCH------HHHHHHHHHHHHhCC
Confidence 3678888888888888876321110 01111 11111123578899999998 66666554
Q ss_pred CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHhHhc------CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 DVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEEM------KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~--------e~l~~a~~vNV~GT~~LLelAk~~------~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|+|||+|+..... +..+..+++|+.|+..+++.+... .+-.+||++||......
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~---------- 148 (247)
T PRK09730 79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG---------- 148 (247)
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC----------
Confidence 458999999964211 123478999999998887766432 11246999999754221
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
.| .....|+.+|+..|.+++... .+++++++||+.++++.....
T Consensus 149 ~~---------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~---- 197 (247)
T PRK09730 149 AP---------------------------GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG---- 197 (247)
T ss_pred CC---------------------------CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC----
Confidence 00 001259999999998876543 589999999999999853210
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+..........+.. .......+|++++++.++..
T Consensus 198 ----~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~~~~~ 231 (247)
T PRK09730 198 ----GEPGRVDRVKSNIP---------MQRGGQPEEVAQAIVWLLSD 231 (247)
T ss_pred ----CCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHhhcCh
Confidence 01111222222111 00123789999999877754
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=8.4e-06 Score=89.75 Aligned_cols=192 Identities=14% Similarity=0.094 Sum_probs=123.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH----HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF----DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.-+||+.+.-|..+.++|.+.... .+. +. +.++......++.++.+|++++ ++++.++ .
T Consensus 10 vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 10 ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADP------ASVQRFFDAAAAALG 83 (250)
T ss_pred EEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHcC
Confidence 347888888888888888763211 011 11 1111111124689999999998 6666555 4
Q ss_pred CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+.... + +.++..+++|+.|+.++++.+... .+-.+||++||........
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 151 (250)
T PRK12939 84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP------------ 151 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC------------
Confidence 68999999997532 1 234567889999999999888642 1234899999965432110
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.+|+..|.+++... .++.+..++|+.+..+...... .
T Consensus 152 --------------------------~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~----~-- 199 (250)
T PRK12939 152 --------------------------KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVP----A-- 199 (250)
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccC----C--
Confidence 01359999999999987654 5789999999988665432111 0
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.........+ .....+++++|++++++.++..
T Consensus 200 --~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 231 (250)
T PRK12939 200 --DERHAYYLKG---------RALERLQVPDDVAGAVLFLLSD 231 (250)
T ss_pred --hHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCc
Confidence 0111111111 2234578999999999988754
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.1e-05 Score=89.87 Aligned_cols=189 Identities=14% Similarity=0.068 Sum_probs=118.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
.=+||+.+.-|..+.++|.+..... + -+.+.++......++.++.+|+++. +++..++
T Consensus 12 vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~~ 85 (258)
T PRK09134 12 ALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADE------AEVRALVARASAAL 85 (258)
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 4488999999999999997632211 0 1111111111134688999999997 6665554
Q ss_pred CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
..+|+|||+|+.... .+.++..+++|+.|+..+++.+... ..-..+|++||...+.. .|
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~----------~p- 154 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL----------NP- 154 (258)
T ss_pred CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC----------CC-
Confidence 357999999986422 1234578999999999999987652 12247787777533211 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.-..|+.||+..|.+.+.++ .++.+..++|+.+.......
T Consensus 155 ---------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--------- 198 (258)
T PRK09134 155 ---------------------------DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS--------- 198 (258)
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC---------
Confidence 01369999999998887764 35889999998876542110
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+.. +.....+.. ......++|+|++++.++..
T Consensus 199 -~~~-~~~~~~~~~---------~~~~~~~~d~a~~~~~~~~~ 230 (258)
T PRK09134 199 -PED-FARQHAATP---------LGRGSTPEEIAAAVRYLLDA 230 (258)
T ss_pred -hHH-HHHHHhcCC---------CCCCcCHHHHHHHHHHHhcC
Confidence 011 111111110 11247799999999988864
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.6e-06 Score=94.90 Aligned_cols=152 Identities=18% Similarity=0.175 Sum_probs=105.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH-------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD-------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd-------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.=+||+.+.-|....++|.+.... .+.+ .+.++.. ...++.++.+|++++ ++++.+++
T Consensus 21 ~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~~g 93 (280)
T PLN02253 21 ALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVE------DDVSRAVDFTVDKFG 93 (280)
T ss_pred EEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCH------HHHHHHHHHHHHHhC
Confidence 448899999999999999863221 1111 1111111 124688999999998 67766554
Q ss_pred CccEEEEcCccCCc---------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccc-ccccccccccccCC
Q psy13944 73 DVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYS-NCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v-~g~~~~I~E~~y~~ 139 (1217)
++|+|||+||.... .+.++..+++|+.|+.++++.+.+. ..-.++|++||... ++.
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------- 162 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG----------- 162 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----------
Confidence 68999999997531 1234578999999999999877531 12247889888643 111
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
..+..|+.||+..|.+++.++ .++.+..++|+.|..+.
T Consensus 163 ----------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 205 (280)
T PLN02253 163 ----------------------------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL 205 (280)
T ss_pred ----------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 012469999999999987764 57899999999987764
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-06 Score=96.18 Aligned_cols=219 Identities=15% Similarity=0.104 Sum_probs=140.8
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc----c-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENA----N-FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p----~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
++|+.++-|..+.+.|.+ -..++.-..|.... . ....++++.+|+.++ +.+..+++++|.||.+-+..
T Consensus 3 V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~------~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 3 VTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDP------ESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-H------HHHHHHHTTCSEEEEESSCS
T ss_pred EECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhcccceEeecccCCH------HHHHHHHcCCceEEeecCcc
Confidence 468888888888888888 22222221221110 0 124578899999988 99999999999999887754
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
. . .-+....+++++|++. ++++||+.|....+...
T Consensus 76 ~--~-------~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~----------------------------------- 110 (233)
T PF05368_consen 76 H--P-------SELEQQKNLIDAAKAA-GVKHFVPSSFGADYDES----------------------------------- 110 (233)
T ss_dssp C--C-------CHHHHHHHHHHHHHHH-T-SEEEESEESSGTTTT-----------------------------------
T ss_pred h--h-------hhhhhhhhHHHhhhcc-ccceEEEEEeccccccc-----------------------------------
Confidence 3 1 1334467899999996 69999974443322100
Q ss_pred cCCCCC-ChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcC-ceeEEeeCCCcee
Q psy13944 165 LIKPMP-NTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLG-IMRTVYQNTSNIV 242 (1217)
Q Consensus 165 ~~~~~P-NtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G-~l~~i~g~~~~~~ 242 (1217)
....| ...-..|...|+.+++. +++.+++||+.-+...-.+..++.+ .... ....++++++...
T Consensus 111 -~~~~p~~~~~~~k~~ie~~l~~~--~i~~t~i~~g~f~e~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 176 (233)
T PF05368_consen 111 -SGSEPEIPHFDQKAEIEEYLRES--GIPYTIIRPGFFMENLLPPFAPVVD-----------IKKSKDVVTLPGPGNQKA 176 (233)
T ss_dssp -TTSTTHHHHHHHHHHHHHHHHHC--TSEBEEEEE-EEHHHHHTTTHHTTC-----------SCCTSSEEEEETTSTSEE
T ss_pred -ccccccchhhhhhhhhhhhhhhc--cccceeccccchhhhhhhhhccccc-----------ccccceEEEEccCCCccc
Confidence 00111 12345788999988875 8999999999766643222111000 1111 1235677777777
Q ss_pred ccc-cHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHHHhh
Q psy13944 243 DMV-PGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIKQNI 321 (1217)
Q Consensus 243 D~V-pVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia~~~ 321 (1217)
.++ ..+|+++++..++..+.. . ..++.+.+++..++..|+++.+.+.+
T Consensus 177 ~~~~~~~Dvg~~va~il~~p~~----~---------------------------~~~~~~~~~~~~~t~~eia~~~s~~~ 225 (233)
T PF05368_consen 177 VPVTDTRDVGRAVAAILLDPEK----H---------------------------NNGKTIFLAGETLTYNEIAAILSKVL 225 (233)
T ss_dssp EEEEHHHHHHHHHHHHHHSGGG----T---------------------------TEEEEEEEGGGEEEHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHcChHH----h---------------------------cCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 775 999999999988877554 1 02456777666889999999999999
Q ss_pred chhh
Q psy13944 322 KEKF 325 (1217)
Q Consensus 322 g~~~ 325 (1217)
|++.
T Consensus 226 G~~v 229 (233)
T PF05368_consen 226 GKKV 229 (233)
T ss_dssp TSEE
T ss_pred CCcc
Confidence 9873
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.6e-06 Score=91.14 Aligned_cols=197 Identities=12% Similarity=0.103 Sum_probs=118.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcC-cc-cCCCeEEEEccCCCCCCCCCHHHHHHhcCC----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKEN-AN-FTERIVVLTADLQSDGLGLDEKEKKVLRED---- 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~-p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~---- 73 (1217)
.-+||+.+.-|....++|.+.....+ .+.+.++. .. ....+.++.+|++++ +++..+++.
T Consensus 7 vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~ 80 (256)
T PRK09186 7 ILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ------ESLEEFLSKSAEK 80 (256)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCH------HHHHHHHHHHHHH
Confidence 34788888899999999987322110 11111110 11 123567789999998 777666543
Q ss_pred ---ccEEEEcCccCC------cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccc-cccccc
Q psy13944 74 ---VNIVFHVAATVK------FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIK-KIEEKF 136 (1217)
Q Consensus 74 ---VDiViH~AA~v~------f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~-~I~E~~ 136 (1217)
+|+|||+|+... +. +.+...+++|+.++..+++.+.+. .+..++|++||.+...... .+.|..
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~ 160 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT 160 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence 799999997531 11 124567888998887776665431 3457999999976543211 000000
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
....+..|+.||+..|.+.+... .++.+.+++|+.+.++..
T Consensus 161 -----------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~----- 206 (256)
T PRK09186 161 -----------------------------SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP----- 206 (256)
T ss_pred -----------------------------ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----
Confidence 00122469999999998875433 578999999997765421
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..+....... . ....+++++|++++++.++...
T Consensus 207 --------~~~~~~~~~~----~-----~~~~~~~~~dva~~~~~l~~~~ 239 (256)
T PRK09186 207 --------EAFLNAYKKC----C-----NGKGMLDPDDICGTLVFLLSDQ 239 (256)
T ss_pred --------HHHHHHHHhc----C-----CccCCCCHHHhhhhHhheeccc
Confidence 1111111111 0 1124789999999998877643
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=8.2e-06 Score=89.76 Aligned_cols=188 Identities=12% Similarity=0.016 Sum_probs=122.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-++|+.+.-|..+.++|.+.... .+. ..+.+.......++.++.+|++++ +++..+++
T Consensus 9 vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 9 ALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP------EAIAPGIAELLEQFG 82 (241)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH------HHHHHHHHHHHHHcC
Confidence 457888888999999999763221 011 111111112234688999999998 66655543
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+..... +.++..+++|+.|+.++++.+... .+..++|++||..+++...
T Consensus 83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 150 (241)
T PRK07454 83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP------------ 150 (241)
T ss_pred CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC------------
Confidence 589999999975321 234567889999999888776321 3456899999986643210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+++..+ .++++.++||+.+-.+.... ..
T Consensus 151 --------------------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~------~~- 197 (241)
T PRK07454 151 --------------------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT------ET- 197 (241)
T ss_pred --------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc------cc-
Confidence 01369999999998876543 58999999999886653110 00
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
. ... . ...-.++.+|+|++++.++..+..
T Consensus 198 ----~----~~~----~-----~~~~~~~~~~va~~~~~l~~~~~~ 226 (241)
T PRK07454 198 ----V----QAD----F-----DRSAMLSPEQVAQTILHLAQLPPS 226 (241)
T ss_pred ----c----ccc----c-----ccccCCCHHHHHHHHHHHHcCCcc
Confidence 0 000 0 011258999999999988765543
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.8e-06 Score=94.65 Aligned_cols=178 Identities=11% Similarity=0.044 Sum_probs=115.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhH----HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAF----DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
=+||+.+.-|....++|.+.... -+. +. +.++.+.. .++..+.+|++++ +++..+++ .
T Consensus 6 lItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~------~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 6 FITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-ARVSVYAADVRDA------DALAAAAADFIAAHGL 78 (257)
T ss_pred EEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC-CeeEEEEcCCCCH------HHHHHHHHHHHHhCCC
Confidence 36888888888888888763211 011 11 11111111 2788999999998 66655443 4
Q ss_pred ccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHH----hHhcCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 74 VNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKM----AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 74 VDiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLel----Ak~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
+|+|||+||.... . +.++..+++|+.|+.++++. +++ .+..++|++||...... .|
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~-~~~~~iv~isS~~~~~~----------~~- 146 (257)
T PRK07024 79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA-ARRGTLVGIASVAGVRG----------LP- 146 (257)
T ss_pred CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHh-cCCCEEEEEechhhcCC----------CC-
Confidence 7999999997431 1 23457899999999998774 333 34568999998654211 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+++..+ .+++++++||+.|.++.....
T Consensus 147 ---------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~------- 192 (257)
T PRK07024 147 ---------------------------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN------- 192 (257)
T ss_pred ---------------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------
Confidence 01359999999999886653 689999999999987632110
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+ ...-..++.++++..++.++.+
T Consensus 193 ------------~---------~~~~~~~~~~~~a~~~~~~l~~ 215 (257)
T PRK07024 193 ------------P---------YPMPFLMDADRFAARAARAIAR 215 (257)
T ss_pred ------------C---------CCCCCccCHHHHHHHHHHHHhC
Confidence 0 0000136789999998887754
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=4e-06 Score=92.32 Aligned_cols=196 Identities=16% Similarity=0.092 Sum_probs=124.2
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCccc--CCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANF--TERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
+.-++|+.+.-|..+.++|.+...+ +. +.+.+..... ..++.++.+|++++ ++++.+++
T Consensus 7 ~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 79 (251)
T PRK07231 7 VAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDE------ADVEAAVAAALERF 79 (251)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHHh
Confidence 3457888889999999998864221 11 1111100111 24588999999998 77776654
Q ss_pred -CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~--------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+|+..... +.++..+++|+.|+.++++.+... .+.++||++||..++....
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 149 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP---------- 149 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC----------
Confidence 469999999874221 224578999999988887776532 3567899999986644211
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
.-..|+.||+..+.+++.+. .++++..+||+.+.++...... ..
T Consensus 150 ----------------------------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~ 198 (251)
T PRK07231 150 ----------------------------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM---GE 198 (251)
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh---cc
Confidence 01359999999888776654 4899999999988665422111 00
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. .+ ........+ .....+++++|++.+++.++...
T Consensus 199 ~-~~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T PRK07231 199 P-TP-ENRAKFLAT---------IPLGRLGTPEDIANAALFLASDE 233 (251)
T ss_pred c-Ch-HHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCcc
Confidence 0 00 111111111 11235789999999999887543
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.6e-05 Score=89.37 Aligned_cols=191 Identities=11% Similarity=0.016 Sum_probs=117.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----HHHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----FDRL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
-.||+.+.-|....++|.+.-...+ -+.+ .++......++.++.+|++++ +++..+++ .
T Consensus 4 lVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~i~~~~~~ 77 (270)
T PRK05650 4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDY------SQLTALAQACEEKWGG 77 (270)
T ss_pred EEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH------HHHHHHHHHHHHHcCC
Confidence 4678888888888888876321110 0111 111111234688899999987 66655543 6
Q ss_pred ccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+|+.... . +.++..+++|+.|+.++.+.+ ++ .+..++|++||..+.....
T Consensus 78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~------------ 144 (270)
T PRK05650 78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKR-QKSGRIVNIASMAGLMQGP------------ 144 (270)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh-CCCCEEEEECChhhcCCCC------------
Confidence 8999999997542 1 224467889998888766654 44 3567999999975532210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHH----hc-CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVRE----KM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~----~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+. +. .++.+.+++|+.+..+......+.. .
T Consensus 145 --------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~ 195 (270)
T PRK05650 145 --------------------------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN---P 195 (270)
T ss_pred --------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc---h
Confidence 013699999986555444 33 5899999999999876433221110 0
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.....+.... ....++++|+|++++.++.+
T Consensus 196 ~~~~~~~~~~-------------~~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 196 AMKAQVGKLL-------------EKSPITAADIADYIYQQVAK 225 (270)
T ss_pred hHHHHHHHHh-------------hcCCCCHHHHHHHHHHHHhC
Confidence 0011111111 11347899999999988764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.6e-05 Score=86.97 Aligned_cols=183 Identities=14% Similarity=0.087 Sum_probs=120.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH--H----Hh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF--D----RL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf--d----~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-.+|+.+.-|..+.++|.+.. ..++ + .+ .++.... .++.++.+|++++ +++..+++
T Consensus 9 ilItGatg~iG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 80 (237)
T PRK07326 9 ALITGGSKGIGFAIAEALLAEG-YKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDE------ADVQRAVDAIVAAF 80 (237)
T ss_pred EEEECCCCcHHHHHHHHHHHCC-CEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCH------HHHHHHHHHHHHHc
Confidence 4478999999999999998632 1121 1 11 1111111 5788999999987 66655443
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+..... +.+...+++|+.|+..+++.|.+. .+..++|++||........
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------ 148 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA------------ 148 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC------------
Confidence 689999999875321 124467899999999998887542 2446799999975422100
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.-..|+.+|+..+.+.+... .+++++++||+.+..+.....+
T Consensus 149 --------------------------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~------- 195 (237)
T PRK07326 149 --------------------------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP------- 195 (237)
T ss_pred --------------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc-------
Confidence 01359999998888776642 6899999999987665321100
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
. ......+..+|++++++.++..+..
T Consensus 196 ~--------------------~~~~~~~~~~d~a~~~~~~l~~~~~ 221 (237)
T PRK07326 196 S--------------------EKDAWKIQPEDIAQLVLDLLKMPPR 221 (237)
T ss_pred c--------------------hhhhccCCHHHHHHHHHHHHhCCcc
Confidence 0 0001137889999999988876544
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=7e-06 Score=90.40 Aligned_cols=153 Identities=20% Similarity=0.154 Sum_probs=103.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
.-+||+.+.-|..+.++|.+..... +. +.+.+...+...++.++.+|+++. ++...++ ..+|
T Consensus 9 vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 9 ALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDV------AAQKALAQALAEAFGRLD 82 (249)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCH------HHHHHHHHHHHHHhCCCC
Confidence 4578999999999999998732210 01 111111111234678899999987 5544332 4689
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccc-ccccccccccccCCCCChHHH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
+|||+|+...+. +.+...+++|+.|+.++++++... ....++|++||... ++. +
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-----------~------ 145 (249)
T PRK06500 83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-----------P------ 145 (249)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-----------C------
Confidence 999999975421 234578999999999999999742 23346777777432 221 0
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
..+.|+.||+..|.+++.++ .++++.++||+.++++.
T Consensus 146 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 146 ----------------------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred ----------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 01469999999999996553 58999999999998874
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.3e-05 Score=87.41 Aligned_cols=150 Identities=15% Similarity=0.043 Sum_probs=101.5
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhH----HHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEE
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAF----DRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFH 79 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH 79 (1217)
+||+.+.-|....++|.+.-.. .+. +.+.+.... ...+++++.+|++++ +++..+++ .+|++||
T Consensus 2 ItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 2 VVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDE------AAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred eecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCH------HHHHHHHHhcCCCCEEEE
Confidence 4677777788888888763211 000 111110001 124688999999998 77777665 4799999
Q ss_pred cCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhc
Q psy13944 80 VAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 80 ~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
+|+.... . +..+..+++|+.|+.+++++.. +.+..++|++||..++... |
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~g~iv~~ss~~~~~~~----------~------------ 132 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR-IAPGGSLTFVSGFAAVRPS----------A------------ 132 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhh-hcCCeEEEEECchhhcCCC----------C------------
Confidence 9987432 1 2355789999999999999554 4566799999998664321 0
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccC
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~ 204 (1217)
.-+.|+.+|+..|.+++..+ .++.+..++|+.+-.+
T Consensus 133 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~ 171 (230)
T PRK07041 133 ----------------SGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTP 171 (230)
T ss_pred ----------------cchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccH
Confidence 01469999999999988765 4577888888876544
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.1e-05 Score=85.89 Aligned_cols=151 Identities=19% Similarity=0.180 Sum_probs=101.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-CccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-DVNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-~VDiVi 78 (1217)
.-+||+.+.-|..+.++|.+.....+ -..+++.......++.++.+|++++ +++..++. ++|+||
T Consensus 5 vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~id~vi 78 (257)
T PRK09291 5 ILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA------IDRAQAAEWDVDVLL 78 (257)
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH------HHHHHHhcCCCCEEE
Confidence 44788888888888888876321110 1112111122234688999999998 77776665 899999
Q ss_pred EcCccCCc----c---cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 79 HVAATVKF----D---EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 79 H~AA~v~f----~---e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
|+|+.... + +.++..+++|+.|+..+.+.+ ++ .+..++|++||...... .
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~~SS~~~~~~----------~-------- 139 (257)
T PRK09291 79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVA-RGKGKVVFTSSMAGLIT----------G-------- 139 (257)
T ss_pred ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCceEEEEcChhhccC----------C--------
Confidence 99996431 1 224567889999987766543 33 34579999999643211 0
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
.....|+.||...|.+.+... .+++++++||+.+..
T Consensus 140 --------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 140 --------------------PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred --------------------CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 011469999999998876543 589999999987643
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.9e-05 Score=85.72 Aligned_cols=193 Identities=16% Similarity=0.086 Sum_probs=124.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
.=.||+.+.-|....++|.+..... +. +.+.+.......++.++.+|++++ +++..++ .++
T Consensus 8 vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 8 ALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDI------EAIKALVDSAVEEFGHI 81 (248)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCH------HHHHHHHHHHHHHcCCC
Confidence 5588999999999999998732210 01 111111112234688999999998 6665443 358
Q ss_pred cEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|+|||+|+.... . +.++..+++|+.|+..+++.+... ++ ..++|++||..++....
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------- 148 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI------------- 148 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-------------
Confidence 999999997532 1 234577899999999999987532 12 35899999976543210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||++.+.+++..+ .++.+.+++|+.|..+...... .
T Consensus 149 -------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-------~ 196 (248)
T TIGR01832 149 -------------------------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALR-------A 196 (248)
T ss_pred -------------------------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccc-------c
Confidence 01359999999998887664 4899999999988776432111 0
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.......... ..+ ...++..+|+|++++.++..
T Consensus 197 ~~~~~~~~~~----~~~-----~~~~~~~~dva~~~~~l~s~ 229 (248)
T TIGR01832 197 DEDRNAAILE----RIP-----AGRWGTPDDIGGPAVFLASS 229 (248)
T ss_pred ChHHHHHHHh----cCC-----CCCCcCHHHHHHHHHHHcCc
Confidence 0011111111 111 13578899999998887753
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=9.3e-06 Score=89.96 Aligned_cols=191 Identities=14% Similarity=0.048 Sum_probs=117.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--------CCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR--------EDVN 75 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~--------~~VD 75 (1217)
=+||+.+.-|..+.++|.+.-.. .+. +++... ...+++.+.+|++++ +++..++ ..+|
T Consensus 6 lVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~D~~~~------~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 6 LITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM---NSLGFTGILLDLDDP------ESVERAADEVIALTDNRLY 76 (256)
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH---HhCCCeEEEeecCCH------HHHHHHHHHHHHhcCCCCe
Confidence 36888888899999998763211 111 111110 112577889999987 4443322 4579
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHH----HHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKL----LKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~L----LelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
.|+|+||..... +.++..+++|+.|+.++ ++.+++ .+..++|++||.+..... +
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~----------~---- 141 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP-HGEGRIVMTSSVMGLIST----------P---- 141 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-cCCCEEEEEcCcccccCC----------C----
Confidence 999999864321 22447889999998876 555555 356789999997542210 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
.-+.|+.||+..|.+.+... .+++++++||+.+..+.... ...
T Consensus 142 ------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-------~~~- 189 (256)
T PRK08017 142 ------------------------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN-------VNQ- 189 (256)
T ss_pred ------------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc-------ccc-
Confidence 01469999999998876432 68999999997665432111 000
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
... .......+...++++++||+++++..++.....
T Consensus 190 -------~~~-~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 190 -------TQS-DKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred -------hhh-ccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 000 000011122335679999999999988865443
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.1e-05 Score=84.03 Aligned_cols=188 Identities=11% Similarity=0.042 Sum_probs=117.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-hH-----H---HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-AF-----D---RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-vf-----d---~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
=+||+.+.-|..+.++|.+.-... +. + .+.........++.++.+|++++ +++..++ .
T Consensus 6 lItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 6 LVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDT------EECAEALAEIEEEEG 79 (245)
T ss_pred EEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 367888888888888887532110 00 0 11111112234688999999997 6555443 3
Q ss_pred CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+|+.... + +.++..+++|+.|+.++++.+ ++ ....+||++||...+... +
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~iss~~~~~~~----------~- 147 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE-QGYGRIINISSVNGLKGQ----------F- 147 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-hCCeEEEEECChhhccCC----------C-
Confidence 58999999987531 1 234477889999999885544 44 355799999997654221 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
.+ ..|+.||++.+.+++.++ .++++.+++|+.+.++......
T Consensus 148 --------------------------~~-~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~------ 194 (245)
T PRK12824 148 --------------------------GQ-TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG------ 194 (245)
T ss_pred --------------------------CC-hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC------
Confidence 01 259999998888776654 5799999999998876432211
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
......+... .....+..++++++++..++.
T Consensus 195 ---~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~ 225 (245)
T PRK12824 195 ---PEVLQSIVNQ---------IPMKRLGTPEEIAAAVAFLVS 225 (245)
T ss_pred ---HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcC
Confidence 1111111111 112335678999999876664
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.4e-06 Score=94.99 Aligned_cols=165 Identities=13% Similarity=0.068 Sum_probs=104.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
.=+||+.+.-|....++|.+..... +. +.+.+... ...++.++.+|+++. ++++.++ .++|
T Consensus 29 vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~-~l~~v~~~~~Dl~d~------~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 29 AIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALA-GIDGVEVVMLDLADL------ESVRAFAERFLDSGRRID 101 (315)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhhhCeEEEccCCCH------HHHHHHHHHHHhcCCCCC
Confidence 4489999999999999998742221 11 11111101 123478999999998 6665544 4689
Q ss_pred EEEEcCccCCc-----ccCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 76 IVFHVAATVKF-----DEHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 76 iViH~AA~v~f-----~e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
+|||+||.... .+.++..+++|+.|+..+++.+ ++. +..++|++||..........++..+.
T Consensus 102 ~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~-------- 172 (315)
T PRK06196 102 ILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPIRWDDPHFT-------- 172 (315)
T ss_pred EEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCCCccccCcc--------
Confidence 99999996421 2345678999999976665544 332 34689999997432211000000000
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
. + ...-..|+.||++.+.+.+... .++.++++||+.|.++..
T Consensus 173 ------------~---~---~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 173 ------------R---G---YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred ------------C---C---CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 0 0 0001469999999998876543 589999999999988754
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.4e-05 Score=84.99 Aligned_cols=190 Identities=12% Similarity=0.088 Sum_probs=118.8
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcC-hhH----HHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFAD-DAF----DRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
..-++|+.+.-|....++|.+.... -+. +.+. ++......++.++.+|++++ +.++.++
T Consensus 7 ~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 80 (253)
T PRK08217 7 VIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDE------EDVEATFAQIAEDF 80 (253)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 3558888888899999988763211 001 1111 11111234688899999987 5554433
Q ss_pred CCccEEEEcCccCCc----------------ccCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCccccccccc
Q psy13944 72 EDVNIVFHVAATVKF----------------DEHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKK 131 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f----------------~e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~ 131 (1217)
..+|+|||+|+.... .+.+...+++|+.|+..+++.+.. ...-..+|++||...++..
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-- 158 (253)
T PRK08217 81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-- 158 (253)
T ss_pred CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC--
Confidence 347999999986321 122346778999999877765432 1122468999987554321
Q ss_pred ccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 132 IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 132 I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
....|+.||++.|.+++.++ .+++++.++|+.+.++..
T Consensus 159 -------------------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~ 201 (253)
T PRK08217 159 -------------------------------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMT 201 (253)
T ss_pred -------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc
Confidence 01369999999999887664 589999999999887643
Q ss_pred CCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 207 EPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 207 eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
... . .........+. ....+.+++|+|+++..++.
T Consensus 202 ~~~-------~--~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~ 236 (253)
T PRK08217 202 AAM-------K--PEALERLEKMI---------PVGRLGEPEEIAHTVRFIIE 236 (253)
T ss_pred ccc-------C--HHHHHHHHhcC---------CcCCCcCHHHHHHHHHHHHc
Confidence 221 0 11111111111 12346789999999988774
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.7e-05 Score=83.96 Aligned_cols=190 Identities=10% Similarity=0.046 Sum_probs=118.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhH------HHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAF------DRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
=+||+.+.-|....++|.+.....+. .... ++......++..+.+|+++. +++..++ .
T Consensus 7 lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 7 YVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW------DSTKAAFDKVKAEVG 80 (246)
T ss_pred EEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHhC
Confidence 47888888999999999874322111 0100 00011234577889999998 6665554 3
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+.... .+.++..+++|+.|+..+++.+.. + .+..++|++||...... .
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~--- 147 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG----------Q--- 147 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC----------C---
Confidence 68999999997531 123457889999997776665532 1 34568999999654211 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.....|+.+|+..|.+.+.+. .++++.+++|+.+.++.....
T Consensus 148 -------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~-------- 194 (246)
T PRK12938 148 -------------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI-------- 194 (246)
T ss_pred -------------------------CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--------
Confidence 011469999998887765543 689999999998877643211
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ...+..+... .....+...+++++++..++..
T Consensus 195 ~-~~~~~~~~~~---------~~~~~~~~~~~v~~~~~~l~~~ 227 (246)
T PRK12938 195 R-PDVLEKIVAT---------IPVRRLGSPDEIGSIVAWLASE 227 (246)
T ss_pred C-hHHHHHHHhc---------CCccCCcCHHHHHHHHHHHcCc
Confidence 0 1112222211 1122356789999988876644
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=7e-05 Score=82.17 Aligned_cols=191 Identities=15% Similarity=0.130 Sum_probs=119.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-----HHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-----DRL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-----d~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-++|+.+.-|..+.++|.+..... +. +.+ .+.......++.++.+|++++ +++..+++
T Consensus 8 ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 81 (247)
T PRK05565 8 AIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSE------EDVENLVEQIVEKF 81 (247)
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHHh
Confidence 4478888888888888887531110 01 111 111111234688999999998 66655544
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||..... +.++..+++|+.|+.++++.+... .+..+||++||....... +
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~----------~- 150 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA----------S- 150 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC----------C-
Confidence 789999999976321 224578899999999888877542 234679999996543210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
.-..|+.||+..+.+++... .+++++++||+.+-.+......
T Consensus 151 ---------------------------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~------ 197 (247)
T PRK05565 151 ---------------------------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS------ 197 (247)
T ss_pred ---------------------------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC------
Confidence 00259999988777765543 6899999999988665322111
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+ ......... .....+...++++++++.++..
T Consensus 198 --~-~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~ 229 (247)
T PRK05565 198 --E-EDKEGLAEE---------IPLGRLGKPEEIAKVVLFLASD 229 (247)
T ss_pred --h-HHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCC
Confidence 0 111111110 1123467889999998877654
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.8e-06 Score=90.21 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=104.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDiViH~ 80 (1217)
.-+||+.+.-|....++|.+...+ +.-.-|........++.++.+|++++ ++.+.++ ..+|+|||+
T Consensus 12 vlItGas~gIG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ 84 (260)
T PRK06523 12 ALVTGGTKGIGAATVARLLEAGAR-VVTTARSRPDDLPEGVEFVAADLTTA------EGCAAVARAVLERLGGVDILVHV 84 (260)
T ss_pred EEEECCCCchhHHHHHHHHHCCCE-EEEEeCChhhhcCCceeEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEEC
Confidence 448999999999999999874322 21111211122345688999999997 5554333 467999999
Q ss_pred CccCC-----c----ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHH
Q psy13944 81 AATVK-----F----DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 81 AA~v~-----f----~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
|+... + .+.++..+++|+.|+.++++.+... ....++|++||....... +
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------~---------- 146 (260)
T PRK06523 85 LGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL--------P---------- 146 (260)
T ss_pred CcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC--------C----------
Confidence 98532 1 1235578899999998887665321 234589999997543210 0
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.....|+.||+..|.+++.++ .++.+.+++|+.|..+.
T Consensus 147 -------------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 147 -------------------ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred -------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 011469999999998887654 57999999999998774
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.8e-05 Score=85.24 Aligned_cols=193 Identities=8% Similarity=0.032 Sum_probs=122.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhh---cCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRK---ENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~---~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.-+||+.+.-|....++|.+..... +. +.+.+ +......++.++.+|++++ ++++.++ .
T Consensus 12 ~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 12 ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHK------QEVEAAIEHIEKDIG 85 (254)
T ss_pred EEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCH------HHHHHHHHHHHHhcC
Confidence 4488999999999999998732211 11 11111 1111124678899999998 6666554 3
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+.... .+.++..+++|+.|+..+++.+.+. .+..++|++||...... .
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------~--- 152 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG----------R--- 152 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC----------C---
Confidence 57999999997432 1234578999999999888877542 24468999999643110 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.....|+.||+..|.+++.++ .++.+..++|+.+..+...+..+
T Consensus 153 -------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~------ 201 (254)
T PRK08085 153 -------------------------DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE------ 201 (254)
T ss_pred -------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc------
Confidence 011369999999999998764 58999999999988875432211
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
...+...+... ....-+...+|++++++.++..
T Consensus 202 -~~~~~~~~~~~---------~p~~~~~~~~~va~~~~~l~~~ 234 (254)
T PRK08085 202 -DEAFTAWLCKR---------TPAARWGDPQELIGAAVFLSSK 234 (254)
T ss_pred -CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCc
Confidence 01111111111 1112366789999988776654
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=1e-05 Score=91.47 Aligned_cols=148 Identities=14% Similarity=0.133 Sum_probs=101.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--------CC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR--------ED 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~--------~~ 73 (1217)
.-.||+.+.-|....++|.+.... +. +.+.+- ...+++.+.+|++++ ++++.++ ..
T Consensus 7 vlItGasggiG~~la~~l~~~G~~-Vi~~~r~~~~~~~l---~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 7 ILITGCSSGIGAYCARALQSDGWR-VFATCRKEEDVAAL---EAEGLEAFQLDYAEP------ESIAALVAQVLELSGGR 76 (277)
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHH---HHCCceEEEccCCCH------HHHHHHHHHHHHHcCCC
Confidence 447899899999999998763221 11 111110 113578899999997 6555443 25
Q ss_pred ccEEEEcCccCCc---c----cCHHHHHHHHHHH----HHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF---D----EHFQTAFEINCKG----TEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f---~----e~l~~a~~vNV~G----T~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+||.... . +.++..+++|+.| ++.+++.+++ .+..++|++||.+.+.. .+
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~-~~~g~iv~isS~~~~~~----------~~-- 143 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK-QGQGRIVQCSSILGLVP----------MK-- 143 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh-cCCCEEEEECChhhcCC----------CC--
Confidence 7999999987432 1 2245688999999 5666777766 35679999999754321 00
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..|.+++..+ .|+.+++++|+.|-.+
T Consensus 144 --------------------------~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 144 --------------------------YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred --------------------------ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 11469999999999887653 6899999999987654
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.7e-05 Score=87.05 Aligned_cols=158 Identities=20% Similarity=0.209 Sum_probs=105.0
Q ss_pred cccCCCcccCCCCCCcccHHHHHHHHhcCh-----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 3 QNRGKLGHNGAKTCKHNSILWVAKDFFADD-----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 3 ~~~g~~g~tg~r~kkg~~~~eRL~~~l~~~-----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
...+..=.||+.+.-|..+.++|.+..... -.+.+.+.......++.++.+|+++. ++++.++
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~ 77 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDR------DEVKALGQKAEAD 77 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH------HHHHHHHHHHHHH
Confidence 344456689999999999999997632211 11222221112234688999999987 6665543
Q ss_pred -CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 72 -EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
..+|+|||+|+.... .+.++..+++|+.|+.++++.+.+. .+..+||++||....... |
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~ 147 (245)
T PRK12936 78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN----------P 147 (245)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC----------C
Confidence 468999999997532 1235578899999999998876531 345789999996432110 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.+|+..+.+++..+ .++++++++|+.+..+
T Consensus 148 ----------------------------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~ 188 (245)
T PRK12936 148 ----------------------------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA 188 (245)
T ss_pred ----------------------------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCc
Confidence 01359999997776665432 5799999999977554
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.5e-05 Score=88.70 Aligned_cols=157 Identities=14% Similarity=0.094 Sum_probs=104.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH----HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF----DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.-+||+.+.-|..+.++|.+.... -+. +. +.+.......++.++.+|++++ ++++.++ .
T Consensus 15 ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~------~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 15 ALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADE------ADIERLAEETLERFG 88 (259)
T ss_pred EEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCH------HHHHHHHHHHHHHhC
Confidence 457888899999999999873211 011 11 1111111224678899999998 6664443 3
Q ss_pred CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+|+.... + +.++..+++|+.|+.++++++.+. ++..+||++||...+..... . +
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~---~-~---- 160 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP---E-V---- 160 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc---c-c----
Confidence 57999999996421 1 224467889999999999987653 24568999999755432110 0 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.....|+.+|+..|.+++.++ .++++.+++|+.+-.+
T Consensus 161 --------------------------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~ 202 (259)
T PRK08213 161 --------------------------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTK 202 (259)
T ss_pred --------------------------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCc
Confidence 001469999999999988764 4788999999877554
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.1e-05 Score=84.43 Aligned_cols=193 Identities=12% Similarity=0.075 Sum_probs=117.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
.-+||+.+.-|....++|.+.....+. +..++. . ..++.++.+|++++ ++++.+++ .+
T Consensus 10 ~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l-~--~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 10 ALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-R--EKGVFTIKCDVGNR------DQVKKSKEVVEKEFGRV 80 (255)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-H--hCCCeEEEecCCCH------HHHHHHHHHHHHHcCCC
Confidence 458999999999999999874322110 111110 0 12578899999998 66665543 57
Q ss_pred cEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHH----hHhcCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKM----AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLel----Ak~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|+|||+|+.... .+.++..+++|+.|+..+.+. +++ .+..++|++||...++... +
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~-~~~g~iv~isS~~~~~~~~---------~--- 147 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKL-SKNGAIVNIASNAGIGTAA---------E--- 147 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCHHhCCCCC---------C---
Confidence 999999987431 123457889999997655444 433 2346899999976543100 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||++.+.+++..+ .++++..++|+.|-.+....... .. .
T Consensus 148 -------------------------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~--~~--~ 198 (255)
T PRK06463 148 -------------------------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS--QE--E 198 (255)
T ss_pred -------------------------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccC--cc--c
Confidence 01359999999998887764 57999999999875543211000 00 0
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.......+... .....+...++++++++.++..
T Consensus 199 ~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~s~ 231 (255)
T PRK06463 199 AEKLRELFRNK---------TVLKTTGKPEDIANIVLFLASD 231 (255)
T ss_pred hHHHHHHHHhC---------CCcCCCcCHHHHHHHHHHHcCh
Confidence 00111111111 1123457789999998887654
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.1e-05 Score=83.81 Aligned_cols=193 Identities=17% Similarity=0.100 Sum_probs=123.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC--
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK-- 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~-- 85 (1217)
.=++|+.+.-|....++|.+.... +.-.-|+..+....++.++.+|++++ .+........+|+|||+|+...
T Consensus 8 ~lVtGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id~lv~~ag~~~~~ 81 (235)
T PRK06550 8 VLITGAASGIGLAQARAFLAQGAQ-VYGVDKQDKPDLSGNFHFLQLDLSDD-----LEPLFDWVPSVDILCNTAGILDDY 81 (235)
T ss_pred EEEcCCCchHHHHHHHHHHHCCCE-EEEEeCCcccccCCcEEEEECChHHH-----HHHHHHhhCCCCEEEECCCCCCCC
Confidence 448899999999999999864222 21111222222345688999999886 2334444567999999998532
Q ss_pred --c-c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcc
Q psy13944 86 --F-D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHT 156 (1217)
Q Consensus 86 --f-~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~ 156 (1217)
+ + +.++..+++|+.|+.++++.+... .+-.++|++||.+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------------------- 134 (235)
T PRK06550 82 KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG--------------------------- 134 (235)
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC---------------------------
Confidence 1 1 234578999999999999988631 233589999997653210
Q ss_pred cccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCce
Q psy13944 157 ELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIM 231 (1217)
Q Consensus 157 ~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l 231 (1217)
.....|+.+|+..+.+.+..+ .++++.+++|+.|.++.... .+.+ ..+...+...
T Consensus 135 -----------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~--~~~~-----~~~~~~~~~~-- 194 (235)
T PRK06550 135 -----------GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA--DFEP-----GGLADWVARE-- 194 (235)
T ss_pred -----------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc--ccCc-----hHHHHHHhcc--
Confidence 011359999998887776544 58999999999998774321 1110 1111111111
Q ss_pred eEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 232 RTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 232 ~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.....+...+|++++++.++..
T Consensus 195 -------~~~~~~~~~~~~a~~~~~l~s~ 216 (235)
T PRK06550 195 -------TPIKRWAEPEEVAELTLFLASG 216 (235)
T ss_pred -------CCcCCCCCHHHHHHHHHHHcCh
Confidence 1123367789999999987754
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.1e-05 Score=87.24 Aligned_cols=151 Identities=15% Similarity=0.171 Sum_probs=99.7
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCccEE
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNIV 77 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDiV 77 (1217)
.||+.+.-|..+.++|.+.... -+. +.+.+.......++.++.+|+++. +++..++ .++|+|
T Consensus 5 ItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 5 VTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNR------AAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEE
Confidence 5778888888888888763221 111 111111011124688999999997 6665544 368999
Q ss_pred EEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 78 FHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 78 iH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
||+||... + .+.++..+++|+.|+..+++.+.. + .+..++|++||...... ++
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------~~-------- 142 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP--------YA-------- 142 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC--------CC--------
Confidence 99998632 1 123457889999997776666532 1 35678999999754211 00
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
..+.|+.||...|.+.+... .++.+.+++|+.+.|+
T Consensus 143 ----------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 143 ----------------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred ----------------------CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 01469999999999887654 5789999999999865
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.07 E-value=2e-05 Score=91.14 Aligned_cols=187 Identities=11% Similarity=-0.009 Sum_probs=105.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... + .+.+.++......++.++.+|+++. ++++.+++
T Consensus 9 vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 9 VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDL------DSVRRFVDDFRALGK 82 (322)
T ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCH------HHHHHHHHHHHHhCC
Confidence 5588888888999988887632211 0 1111111111124688999999998 66665543
Q ss_pred CccEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHhHhc----C-CCCeEEEEcCcccccccccccccc-cC
Q psy13944 73 DVNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEEM----K-NLDSFIYVSTAYSNCNIKKIEEKF-YE 138 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-----~---e~l~~a~~vNV~GT~~LLelAk~~----~-~lk~fV~vSTa~v~g~~~~I~E~~-y~ 138 (1217)
.+|+|||+||.... . +.++..+++|+.|+..+++++... + ...++|++||...+..... ... .+
T Consensus 83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~--~~~~~~ 160 (322)
T PRK07453 83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELG--GKIPIP 160 (322)
T ss_pred CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccC--CccCCC
Confidence 48999999996421 1 234578899999999998887641 1 1248999999765432100 000 00
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc------CCCCEEEEecceeccC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM------DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~------~gLPvvIvRPsiV~G~ 204 (1217)
.+.+...+......... ........ .....+.|+.||++.+.+...++ .++.+..+||+.|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 161 APADLGDLSGFEAGFKA-PISMADGK-KFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred Cccchhhhhcchhcccc-cccccCcc-CCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 01111100000000000 00000000 00112579999998766655443 3789999999999865
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.8e-05 Score=87.02 Aligned_cols=155 Identities=19% Similarity=0.140 Sum_probs=105.8
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcChh---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADDA---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
...=+||+.+.-|....++|.+.....+ .+.+.++......++.++.+|++++ ++++.+++
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~ 79 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA------AAVTRLFDAAET 79 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHH
Confidence 3455889988899999988876322111 1112222222345788999999998 66666554
Q ss_pred ---CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 ---DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ---~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+|+.... . +.++..+++|+.|+.++++.+.+ +..-.++|++||...... .|
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~- 148 (245)
T PRK12937 80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP----------LP- 148 (245)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC----------CC-
Confidence 68999999997532 1 23456789999999999988864 223348999998644211 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
..+.|+.+|...|.+++..+ .++.+.+++|+.+-.+
T Consensus 149 ---------------------------~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~ 189 (245)
T PRK12937 149 ---------------------------GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATE 189 (245)
T ss_pred ---------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCc
Confidence 11469999999999887653 5788999999877654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.8e-05 Score=85.81 Aligned_cols=180 Identities=13% Similarity=0.075 Sum_probs=119.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC----ccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED----VNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~----VDiVi 78 (1217)
.-+||+.+.-|....++|.+...+ -+. +.+.+. .....++.++.+|++++ ++++.++++ .|+++
T Consensus 4 vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 4 VLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL-HTQSANIFTLAFDVTDH------PGTKAALSQLPFIPELWI 76 (240)
T ss_pred EEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHhcCCCeEEEeeCCCH------HHHHHHHHhcccCCCEEE
Confidence 447888888888888888763221 111 111111 11124688999999998 777766654 58899
Q ss_pred EcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 79 HVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 79 H~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
|.|+...+. +.++..+++|+.|+.++++++... .+-.++|++||..... +.|
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~----------~~~---------- 136 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL----------ALP---------- 136 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc----------CCC----------
Confidence 999864321 124468999999999999998752 2335789998864211 110
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
....|+.||+..|.+.+.+. .+++++++||+.|.++..+... .
T Consensus 137 ------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-----~--------- 184 (240)
T PRK06101 137 ------------------RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT-----F--------- 184 (240)
T ss_pred ------------------CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC-----C---------
Confidence 01369999999999886543 6899999999999886432100 0
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ....++.+++++.++.++..
T Consensus 185 -----------~---~~~~~~~~~~a~~i~~~i~~ 205 (240)
T PRK06101 185 -----------A---MPMIITVEQASQEIRAQLAR 205 (240)
T ss_pred -----------C---CCcccCHHHHHHHHHHHHhc
Confidence 0 01147889999998877765
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=4.9e-05 Score=83.88 Aligned_cols=181 Identities=15% Similarity=0.072 Sum_probs=116.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-----HHH---hhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-----FDR---LRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~---Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
.-+||+.+.-|....++|.+...+.+ -++ +...... ...++.++.+|++++ +++..++
T Consensus 5 vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~ 78 (248)
T PRK08251 5 ILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH------DQVFEVFAEFRDE 78 (248)
T ss_pred EEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH------HHHHHHHHHHHHH
Confidence 44788888889999999876322100 011 1111111 124688999999998 6655443
Q ss_pred -CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 72 -EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
..+|+|||+||..... +.....+++|+.|+.++++.+... .+..+||++||....... +.
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------~~- 149 (248)
T PRK08251 79 LGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL--------PG- 149 (248)
T ss_pred cCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC--------CC-
Confidence 3689999999874321 223467889999999988877421 356789999996442110 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..+.+++.+. .++++++++|+.|.++....
T Consensus 150 ----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~------- 194 (248)
T PRK08251 150 ----------------------------VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK------- 194 (248)
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc-------
Confidence 01369999999988876654 47889999999886652210
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+ . ....++.++++++++.++..
T Consensus 195 ------------~~---------~-~~~~~~~~~~a~~i~~~~~~ 217 (248)
T PRK08251 195 ------------AK---------S-TPFMVDTETGVKALVKAIEK 217 (248)
T ss_pred ------------cc---------c-CCccCCHHHHHHHHHHHHhc
Confidence 00 0 11257789999999887754
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=7.8e-05 Score=82.91 Aligned_cols=197 Identities=14% Similarity=0.123 Sum_probs=121.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--HHH----hhh---cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--FDR----LRK---ENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--fd~----Lr~---~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.=++|+.+.-|....++|.+.....+ .++ +.+ +......++.++.+|++++ +++..+++
T Consensus 9 vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 82 (260)
T PRK06198 9 ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDV------EDCRRVVAAADEAF 82 (260)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH------HHHHHHHHHHHHHh
Confidence 34788888888888888876422211 111 110 0011224678899999987 66655543
Q ss_pred -CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+|+.... + +.++..+++|+.|+.++++.+.+. ....++|++||...++...
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---------- 152 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP---------- 152 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC----------
Confidence 57999999997431 1 223467899999999998887542 1124799999976543211
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
..+.|+.+|...|.+.+.++ .++.++.++|+.+.++...... ..
T Consensus 153 ----------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~---~~ 201 (260)
T PRK06198 153 ----------------------------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQ---RE 201 (260)
T ss_pred ----------------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhh---hh
Confidence 01469999999999887654 5688999999998887431100 00
Q ss_pred c-chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 M-NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~-~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+ .....++.....+ .....++++++++++++.++..
T Consensus 202 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~~l~~~ 238 (260)
T PRK06198 202 FHGAPDDWLEKAAAT---------QPFGRLLDPDEVARAVAFLLSD 238 (260)
T ss_pred ccCCChHHHHHHhcc---------CCccCCcCHHHHHHHHHHHcCh
Confidence 0 0111112111111 1123468999999999877653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=6.4e-05 Score=83.04 Aligned_cols=192 Identities=15% Similarity=0.112 Sum_probs=120.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D- 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~- 73 (1217)
.=+||+.+.-|....++|.+...+.+ -+.+.+.......++.++.+|++++ +++..+++ .
T Consensus 8 ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 8 VLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDR------EQVQAMFATATEHFGKP 81 (253)
T ss_pred EEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCH------HHHHHHHHHHHHHhCCC
Confidence 45789999999999999987422211 0111111111225788999999987 66655543 2
Q ss_pred ccEEEEcCccCC---------cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 74 VNIVFHVAATVK---------FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 74 VDiViH~AA~v~---------f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
+|+|||+|+... +. +.+...+++|+.|+.++++.|... .+..++|++||...... .
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--------~ 153 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNP--------V 153 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC--------C
Confidence 899999997521 11 123467999999999999998631 23468999998532110 0
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
. + .+.|+.||+..|.+++.++ .++.+..++|+.+-.+... +.
T Consensus 154 -~----------------------------~-~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~---~~ 200 (253)
T PRK08642 154 -V----------------------------P-YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS---AA 200 (253)
T ss_pred -C----------------------------C-ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh---cc
Confidence 0 0 1469999999999998864 5688888999887654211 10
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+......+... . ....+...+|++++++.++..
T Consensus 201 -----~~~~~~~~~~~~-~--------~~~~~~~~~~va~~~~~l~~~ 234 (253)
T PRK08642 201 -----TPDEVFDLIAAT-T--------PLRKVTTPQEFADAVLFFASP 234 (253)
T ss_pred -----CCHHHHHHHHhc-C--------CcCCCCCHHHHHHHHHHHcCc
Confidence 011111111111 1 112478899999999887754
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.2e-05 Score=87.03 Aligned_cols=190 Identities=13% Similarity=0.103 Sum_probs=121.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHH------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFD------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
.-+||+.+.-|....++|.+..... +.+ .+.... ...++.++.+|++++ ++++.+++ +
T Consensus 18 vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 18 AVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQL--LGGNAKGLVCDVSDS------QSVEAAVAAVISAFGR 89 (255)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--hCCceEEEEecCCCH------HHHHHHHHHHHHHhCC
Confidence 4588999999999999998632211 011 011111 123567899999987 66665543 5
Q ss_pred ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|+|||+|+..... +.++..+++|+.|+.++++.+... .+..+||++||...... .+
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~--- 156 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA----------LE--- 156 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC----------CC---
Confidence 79999999975321 123468899999999999988642 24568999999754211 00
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+..+ .++.+..++|+.|-.+.... .| .+
T Consensus 157 -------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~--~~----~~ 205 (255)
T PRK06841 157 -------------------------RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK--AW----AG 205 (255)
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc--cc----ch
Confidence 01359999999888876654 57999999999887663211 01 01
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
........+ .....+.+.+|++++++.++..
T Consensus 206 --~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~ 236 (255)
T PRK06841 206 --EKGERAKKL---------IPAGRFAYPEEIAAAALFLASD 236 (255)
T ss_pred --hHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 011111111 1123578999999999887754
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=4e-05 Score=86.12 Aligned_cols=183 Identities=12% Similarity=0.034 Sum_probs=117.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
.-+||+.+.-|....++|.+...+. +. +.+.+. .....++.++.+|++++ ++++.++ .++|
T Consensus 8 ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 8 VAITGGARGIGLATARALAALGARVAIGDLDEALAKET-AAELGLVVGGPLDVTDP------ASFAAFLDAVEADLGPID 80 (273)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHhccceEEEccCCCH------HHHHHHHHHHHHHcCCCC
Confidence 5589999999999999988732211 11 111111 01122578899999997 6654433 4579
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
++||+||..... +.+...+++|+.|+..+++.+... .+..++|++||....... |
T Consensus 81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~----- 145 (273)
T PRK07825 81 VLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV----------P----- 145 (273)
T ss_pred EEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC----------C-----
Confidence 999999975321 124568899999999887776431 345689999997543210 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHh----c-CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREK----M-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~----~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
.-..|+.||+..+.+.+.. . .++++++++|+.+-.+.... .
T Consensus 146 -----------------------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~-------~---- 191 (273)
T PRK07825 146 -----------------------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAG-------T---- 191 (273)
T ss_pred -----------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcc-------c----
Confidence 0135999998777665443 2 68999999998764432110 0
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
. ......++.++|+|++++.++.+..
T Consensus 192 --------------~--~~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 192 --------------G--GAKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred --------------c--cccCCCCCCHHHHHHHHHHHHhCCC
Confidence 0 0112246899999999998887543
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.3e-05 Score=86.75 Aligned_cols=241 Identities=16% Similarity=0.078 Sum_probs=156.4
Q ss_pred cccCCCCCCcccHHHHHHHH-------hc-ChhHHHhhhc----Ccc--cCCCeEEEEccCCCCCCCCCHHHHHHhcCC-
Q psy13944 9 GHNGAKTCKHNSILWVAKDF-------FA-DDAFDRLRKE----NAN--FTERIVVLTADLQSDGLGLDEKEKKVLRED- 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~-------l~-~~vfd~Lr~~----~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~- 73 (1217)
-+||-.+..|.-+.|=|..- .+ +.-|..-|=+ +|. .-.......||++|. .-+..++..
T Consensus 32 LITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDs------s~L~k~I~~i 105 (376)
T KOG1372|consen 32 LITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDS------SCLIKLISTI 105 (376)
T ss_pred EEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccch------HHHHHHHhcc
Confidence 36777777777666665541 11 1223322222 122 223567889999998 777777765
Q ss_pred -ccEEEEcCccC----CcccCHHHHHHHHHHHHHHHHHHhHhcC--CCCeEEEEcCccccccccc--ccccccCCCCChH
Q psy13944 74 -VNIVFHVAATV----KFDEHFQTAFEINCKGTEKLLKMAEEMK--NLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHI 144 (1217)
Q Consensus 74 -VDiViH~AA~v----~f~e~l~~a~~vNV~GT~~LLelAk~~~--~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~ 144 (1217)
.+-|+|+||.. +|+-+ +...++...||.+||++.+.|. .--+|-..||+..||...+ -.|..+-.
T Consensus 106 kPtEiYnLaAQSHVkvSFdlp-eYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFy----- 179 (376)
T KOG1372|consen 106 KPTEVYNLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFY----- 179 (376)
T ss_pred CchhhhhhhhhcceEEEeecc-cceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCC-----
Confidence 48999999984 55544 3456778889999999998873 2247888999998885432 12221111
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
| -++|+.+|..+-.++-.|+ +++=.| -++.+-. +.|..|-.--..-.++-
T Consensus 180 ------------------P------RSPYa~aKmy~~WivvNyREAYnmfAc---NGILFNH-ESPRRGenFVTRKItRs 231 (376)
T KOG1372|consen 180 ------------------P------RSPYAAAKMYGYWIVVNYREAYNMFAC---NGILFNH-ESPRRGENFVTRKITRS 231 (376)
T ss_pred ------------------C------CChhHHhhhhheEEEEEhHHhhcceee---ccEeecC-CCCccccchhhHHHHHH
Confidence 1 1679999999887775554 444332 2333332 44555532222233444
Q ss_pred HHHHhcCcee-EEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcccee
Q psy13944 223 YVAVGLGIMR-TVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNY 301 (1217)
Q Consensus 223 i~~~~~G~l~-~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Y 301 (1217)
+..+..|... ...|+.+..+||-|..|-|+||...+.+... .-|
T Consensus 232 vakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~P-----------------------------------dDf 276 (376)
T KOG1372|consen 232 VAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSP-----------------------------------DDF 276 (376)
T ss_pred HHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCC-----------------------------------Cce
Confidence 4445555554 4578999999999999999999988876444 247
Q ss_pred eccCC-ccCchHHHHHHHHhhchh
Q psy13944 302 EINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 302 nI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
-|..| ..+.+|+++.....+|+.
T Consensus 277 ViATge~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 277 VIATGEQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred EEecCCcccHHHHHHHHHHhhCcE
Confidence 78888 899999999998888864
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=6.7e-05 Score=83.68 Aligned_cols=201 Identities=15% Similarity=0.114 Sum_probs=122.7
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcC-hhHHH------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFAD-DAFDR------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
..=+||+.+.-|....++|.+.... -+.++ ..++......++.++.+|++++ ++++.+++
T Consensus 8 ~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 8 TALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDP------ASVAAAIKRAKEKEG 81 (263)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 3447888888999999999874221 00110 0000011124678899999998 66665544
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+..... +.++..+++|+.|+..+++.+... .+..++|++||...... +.+
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~-- 150 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV---------ADP-- 150 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc---------CCC--
Confidence 579999999975321 123467899999999999887531 23468999999643110 000
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.+|+..|.+++.++ .++.+..++|+.+.++......++.. ..
T Consensus 151 --------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-~~ 203 (263)
T PRK08226 151 --------------------------GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSN-PE 203 (263)
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhcc-CC
Confidence 01359999999998887654 47899999999988864322211100 00
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+..++..+..+. ....+...+|++++++.++..
T Consensus 204 ~~~~~~~~~~~~~---------p~~~~~~~~~va~~~~~l~~~ 237 (263)
T PRK08226 204 DPESVLTEMAKAI---------PLRRLADPLEVGELAAFLASD 237 (263)
T ss_pred CcHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCc
Confidence 1112222222221 112356889999988776643
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.6e-05 Score=89.26 Aligned_cols=193 Identities=18% Similarity=0.088 Sum_probs=123.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh----------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA----------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v----------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
.=+||+.+.-|....++|.+.....+ .+.+.+.....-.++.++.+|++++ +++..++
T Consensus 52 vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~ 125 (294)
T PRK07985 52 ALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE------KFARSLVHEAHKA 125 (294)
T ss_pred EEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH------HHHHHHHHHHHHH
Confidence 34889999999999999987322211 1111111111234678899999997 6555443
Q ss_pred -CCccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 -EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 -~~VDiViH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
..+|+++|+|+... + .+.+...+++|+.|+..+++++... ..-.++|++||...+....
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------- 194 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP----------- 194 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC-----------
Confidence 45799999998632 1 1234578999999999999988652 2235899999976543210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..+.+++..+ .++++..++|+.|.++.... +. .
T Consensus 195 ---------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~--~~---~ 242 (294)
T PRK07985 195 ---------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS--GG---Q 242 (294)
T ss_pred ---------------------------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccc--cC---C
Confidence 01369999999988876654 58999999999999875321 00 0
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.......+... . ....+...+|++++++.++..
T Consensus 243 --~~~~~~~~~~~----~-----~~~r~~~pedva~~~~fL~s~ 275 (294)
T PRK07985 243 --TQDKIPQFGQQ----T-----PMKRAGQPAELAPVYVYLASQ 275 (294)
T ss_pred --CHHHHHHHhcc----C-----CCCCCCCHHHHHHHHHhhhCh
Confidence 11111111111 0 112356689999998877654
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=7.4e-05 Score=85.53 Aligned_cols=181 Identities=15% Similarity=0.079 Sum_probs=117.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
=+||+.+.-|....++|.+...+ .-.+.+.++......++.++.+|++++ +++..+++ +
T Consensus 44 lItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 44 LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDL------DAVDALVADVEKRIGG 117 (293)
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHcCC
Confidence 37888888999999998763211 001111111111224578899999998 66666554 7
Q ss_pred ccEEEEcCccCCc---c------cCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 74 VNIVFHVAATVKF---D------EHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 74 VDiViH~AA~v~f---~------e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
+|+|||+||.... . +.++..+++|+.|+..+++.+. + .+..++|++||..+.... .|
T Consensus 118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~~~g~iv~isS~~~~~~~---------~p 187 (293)
T PRK05866 118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLE-RGDGHIINVATWGVLSEA---------SP 187 (293)
T ss_pred CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcEEEEECChhhcCCC---------CC
Confidence 8999999987532 1 1234678999999888877653 3 345689999997543210 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
..+.|+.||+..+.+++..+ .++.+.+++|+.|-.+...+..
T Consensus 188 ----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~----- 234 (293)
T PRK05866 188 ----------------------------LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK----- 234 (293)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-----
Confidence 11469999999988876653 5899999999876554321100
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
... + ...+..+++|+.++.++.+
T Consensus 235 -----------------~~~--~---~~~~~pe~vA~~~~~~~~~ 257 (293)
T PRK05866 235 -----------------AYD--G---LPALTADEAAEWMVTAART 257 (293)
T ss_pred -----------------ccc--C---CCCCCHHHHHHHHHHHHhc
Confidence 000 0 1246789999999888865
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.6e-05 Score=86.95 Aligned_cols=155 Identities=15% Similarity=0.202 Sum_probs=106.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
.-+||+.+.-|....++|.+.... .-.+.+.+..+....++.++.+|++++ ++...+++ .
T Consensus 18 vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 18 AIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKP------ESAEKVVKEALEEFGK 91 (258)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHHcCC
Confidence 447899999999999999873221 111222222222335788999999997 66665554 6
Q ss_pred ccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|++||+|+.... + +.++..+++|+.|+..+++.+.+. .+..++|++||...+....
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 158 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK------------- 158 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-------------
Confidence 7999999997532 1 234578899999988887766531 2346899999976532110
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
.-..|+.+|++.|.+++.++ .++.+.+++|+.|..+..
T Consensus 159 -------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~ 201 (258)
T PRK06935 159 -------------------------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANT 201 (258)
T ss_pred -------------------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccch
Confidence 01369999999999887764 589999999998877643
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.4e-05 Score=84.99 Aligned_cols=197 Identities=15% Similarity=0.080 Sum_probs=120.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH--------Hh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD--------RL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd--------~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
.=+||+.+.-|....++|.+.... .+.. .+ .++......++.++.+|++++ ++++.+++
T Consensus 11 vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~ 84 (257)
T PRK12744 11 VLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTA------AAVEKLFDDAK 84 (257)
T ss_pred EEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCH------HHHHHHHHHHH
Confidence 447888888899999998863222 1111 01 111011123688899999998 67765543
Q ss_pred ----CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 ----DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ----~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||.... . +.++..+++|+.|+..+++.+.. +..-.++++++|+.+... . |
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~---------~-~ 154 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF---------T-P 154 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc---------C-C
Confidence 57999999997421 1 12457889999999999998864 222246776644322111 0 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||++.|.+++.++ .++++..++|+.+.++...+..+
T Consensus 155 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~---- 202 (257)
T PRK12744 155 ----------------------------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG---- 202 (257)
T ss_pred ----------------------------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc----
Confidence 11469999999999998775 47999999999997764332111
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+... ..... . ....+.....+.+++|++++++.++..
T Consensus 203 ---~~~~--~~~~~-~--~~~~~~~~~~~~~~~dva~~~~~l~~~ 239 (257)
T PRK12744 203 ---AEAV--AYHKT-A--AALSPFSKTGLTDIEDIVPFIRFLVTD 239 (257)
T ss_pred ---cchh--hcccc-c--ccccccccCCCCCHHHHHHHHHHhhcc
Confidence 0000 00000 0 001111122478899999999887763
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00013 Score=79.82 Aligned_cols=152 Identities=12% Similarity=0.096 Sum_probs=97.7
Q ss_pred ccCCCCCCcccHHHHHHHHhcChh------HHHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDA------FDRL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------ED 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~v------fd~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~ 73 (1217)
+||+.+.-|....++|.+.....+ -+.+ ..+......++.++.+|++++ ++++.++ ..
T Consensus 5 ItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 5 VTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF------ESCKAAVAKVEAELGP 78 (242)
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCH------HHHHHHHHHHHHHcCC
Confidence 577777778888888865321100 0111 011111234788999999997 6554443 45
Q ss_pred ccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+|+.... + +.+...+++|+.|+..+++.+ ++ .+..++|++||.+.....
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~iss~~~~~~~------------- 144 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE-RGWGRIINISSVNGQKGQ------------- 144 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEEEEEcchhhcCCC-------------
Confidence 8999999987531 1 234467889999988865554 33 355789999996432110
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
.....|+.+|...+.+++..+ .++++..++|+.+.++..
T Consensus 145 -------------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~ 188 (242)
T TIGR01829 145 -------------------------FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMV 188 (242)
T ss_pred -------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccc
Confidence 001359999998777765543 589999999999887643
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.2e-05 Score=87.06 Aligned_cols=116 Identities=15% Similarity=0.150 Sum_probs=82.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 121 (276)
T PRK06482 48 DRLWVLQLDVTDSA------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH 121 (276)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999864 333332 358999999996542 2334567889999999999998
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..+||++||...... .| ..+.|+.||+..|.++.+|
T Consensus 122 ~~~~-~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 162 (276)
T PRK06482 122 LRRQ-GGGRIVQVSSEGGQIA----------YP----------------------------GFSLYHATKWGIEGFVEAV 162 (276)
T ss_pred HHhc-CCCEEEEEcCcccccC----------CC----------------------------CCchhHHHHHHHHHHHHHH
Confidence 333 5678999999643211 00 1136999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ ..++.+.++||.++.
T Consensus 163 ~------~~~~~~gi~v~~v~pg~~~ 182 (276)
T PRK06482 163 A------QEVAPFGIEFTIVEPGPAR 182 (276)
T ss_pred H------HHhhccCcEEEEEeCCccc
Confidence 4 222 348889999998874
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.2e-05 Score=83.63 Aligned_cols=193 Identities=15% Similarity=0.144 Sum_probs=115.5
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hh--------HHHhhhcCccc--CCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DA--------FDRLRKENANF--TERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~v--------fd~Lr~~~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
.||+.+.-|....++|.+...+ .+ .+.+.++.... ...+..+.+|++++ +.++.++
T Consensus 4 VtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 77 (251)
T PRK07069 4 ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDE------AQWQALLAQAADAM 77 (251)
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCH------HHHHHHHHHHHHHc
Confidence 5777777788888888753211 00 11111111111 12345678999988 6665544
Q ss_pred CCccEEEEcCccCCcc-------cCHHHHHHHHHH----HHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 72 EDVNIVFHVAATVKFD-------EHFQTAFEINCK----GTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f~-------e~l~~a~~vNV~----GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
..+|+|||+|+..... +.....+++|+. +++.+++.+++. +..+||++||...+....
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~~~~~~~~---------- 146 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSVAAFKAEP---------- 146 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecChhhccCCC----------
Confidence 3579999999976431 123467888988 777888888763 567999999976543210
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
....|+.||+..+.+++.++ .++.+..++|+.+.++...+....
T Consensus 147 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~- 197 (251)
T PRK07069 147 ----------------------------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQR- 197 (251)
T ss_pred ----------------------------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhh-
Confidence 01359999999998887543 247788999998888754321100
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ........+..+. ....+..++|++++++.++..
T Consensus 198 --~-~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~ 232 (251)
T PRK07069 198 --L-GEEEATRKLARGV---------PLGRLGEPDDVAHAVLYLASD 232 (251)
T ss_pred --c-cchhHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCc
Confidence 0 0011111222221 112356789999998876543
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0001 Score=81.91 Aligned_cols=191 Identities=16% Similarity=0.133 Sum_probs=119.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-H----H---HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-F----D---RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-f----d---~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.=++|+.+.-|....++|.+.....+ . + .+.++......++.++.+|++++ ++...++ .
T Consensus 14 vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 14 AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE------QELSALADFALSKLG 87 (255)
T ss_pred EEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHcC
Confidence 44788888999999999887322110 1 1 11111111124678899999998 6655443 3
Q ss_pred CccEEEEcCccCC---cc---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 DVNIVFHVAATVK---FD---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 ~VDiViH~AA~v~---f~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.+|+|||+||... ++ +.++..+++|+.|+.++++++... .+..++|++||...... .
T Consensus 88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------~---- 153 (255)
T PRK06113 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK----------N---- 153 (255)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC----------C----
Confidence 5799999999753 22 234466899999999999998631 23358999999754211 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
.....|+.||++.+.+++..+ .++.+.++.|+.+-.+.... ...
T Consensus 154 ------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~-------~~~ 202 (255)
T PRK06113 154 ------------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-------VIT 202 (255)
T ss_pred ------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc-------ccC
Confidence 011369999999999997764 56788888888776543211 000
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
.......... .....+...+|++++++.++.
T Consensus 203 -~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~ 233 (255)
T PRK06113 203 -PEIEQKMLQH---------TPIRRLGQPQDIANAALFLCS 233 (255)
T ss_pred -HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcC
Confidence 1111111111 111235688999999888764
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.8e-05 Score=84.48 Aligned_cols=153 Identities=15% Similarity=0.123 Sum_probs=100.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-hH----H---HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-AF----D---RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-vf----d---~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
=+||+.+.-|....++|.+..... +. + .+.++......++.++.+|++++ +.++.+++ +
T Consensus 6 lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 6 LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDR------DQVFAAVRQVVDTFGD 79 (256)
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHHcCC
Confidence 368888888899999988632110 01 1 11111111234678899999998 66555443 5
Q ss_pred ccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+|+.... . +..+..+++|+.|+..+++.+.+. +.-.++|++||...... .|
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~-- 147 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG----------NP-- 147 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC----------CC--
Confidence 7999999987422 1 224578899999998877776542 22347999998643211 00
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
....|+.||+..|.+++.++ .++.+..++|+.+..+.
T Consensus 148 --------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 148 --------------------------ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred --------------------------CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 01369999999887776654 57899999999887763
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.5e-05 Score=87.07 Aligned_cols=150 Identities=16% Similarity=0.072 Sum_probs=102.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHH-------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFD-------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR--------E 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd-------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~--------~ 72 (1217)
-+||+.+.-|....++|.+.... .+.+ .+.+..+ ..++.++.+|+++. +++..++ .
T Consensus 5 lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~------~~v~~~~~~~~~~~~~ 76 (260)
T PRK08267 5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDR------AAWDAALADFAAATGG 76 (260)
T ss_pred EEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCH------HHHHHHHHHHHHHcCC
Confidence 36888888889999998874321 1111 1111111 24688999999987 6655543 3
Q ss_pred CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+.... . +.++..+++|+.|+.++++++.+. .+..++|++||....... +
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~-- 144 (260)
T PRK08267 77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ----------P-- 144 (260)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC----------C--
Confidence 56999999997532 1 234578999999999999887531 234689999996542110 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..|.+.+... .++++.+++|+.+-.+
T Consensus 145 --------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 145 --------------------------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred --------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 01469999999988877653 5799999999987654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=8.1e-05 Score=86.92 Aligned_cols=188 Identities=15% Similarity=0.149 Sum_probs=117.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.=+||+.+.-|....++|.+..... -.+.+.++....-.++.++.+|++++ ++++.++ .
T Consensus 11 vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~------~~v~~~~~~~~~~~g 84 (334)
T PRK07109 11 VVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA------EAVQAAADRAEEELG 84 (334)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCH------HHHHHHHHHHHHHCC
Confidence 4478888888888888887632210 01111111112234688999999998 7766554 3
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+|+...+. +.++..+++|+.|+.++.+.+ ++ .+..++|++||...+... |
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~-~~~g~iV~isS~~~~~~~----------~- 152 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRP-RDRGAIIQVGSALAYRSI----------P- 152 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEEEEeCChhhccCC----------C-
Confidence 689999999974321 224467888888877655544 33 234689999998765321 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
....|+.||+..+.+.+..+ .++.+++++|+.|-.+.. .|..
T Consensus 153 ---------------------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~----~~~~ 201 (334)
T PRK07109 153 ---------------------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF----DWAR 201 (334)
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh----hhhh
Confidence 01369999998887765442 368899999998765421 1110
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
+ .. + ........++..+|+|++++.++.++
T Consensus 202 ~----------~~-~------~~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 202 S----------RL-P------VEPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred h----------hc-c------ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 0 00 0 00111234678999999999988754
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.3e-05 Score=84.42 Aligned_cols=149 Identities=10% Similarity=0.072 Sum_probs=101.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------CccEEEEcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------DVNIVFHVA 81 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------~VDiViH~A 81 (1217)
.-++|+.+.-|....++|.+.... +.-.-|..... ....++.+|++++ +++..+++ ++|+|||+|
T Consensus 6 vlItG~s~~iG~~ia~~l~~~G~~-v~~~~r~~~~~--~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 6 VLVTGATKGIGLALSLRLANLGHQ-VIGIARSAIDD--FPGELFACDLADI------EQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred EEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCcccc--cCceEEEeeCCCH------HHHHHHHHHHHHhCCCcEEEECC
Confidence 447899999999998888764322 21111211111 1235789999998 66655554 579999999
Q ss_pred ccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhh
Q psy13944 82 ATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 82 A~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~ 151 (1217)
+..... +.....+++|+.|+.++.+.+... .+..++|++||...++..
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------- 134 (234)
T PRK07577 77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL---------------------- 134 (234)
T ss_pred CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC----------------------
Confidence 975431 223467889999988887666421 345799999997654321
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..|.+++.++ .++.++++||+.+..+
T Consensus 135 -----------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~ 175 (234)
T PRK07577 135 -----------------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETE 175 (234)
T ss_pred -----------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCc
Confidence 01369999999998887643 5899999999988765
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.4e-05 Score=96.30 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=50.6
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
+++++.+|++++. +..++.++|+|||+|+.... ....+|+.||.|++++|++. +. ++||+||++
T Consensus 41 ~ve~v~~Dl~d~~-------l~~al~~~D~VIHLAa~~~~-----~~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~ 104 (699)
T PRK12320 41 RVDYVCASLRNPV-------LQELAGEADAVIHLAPVDTS-----APGGVGITGLAHVANAAARA-GA-RLLFVSQAA 104 (699)
T ss_pred CceEEEccCCCHH-------HHHHhcCCCEEEEcCccCcc-----chhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC
Confidence 5789999999852 45666789999999986321 12357999999999999987 55 799999874
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.5e-05 Score=85.31 Aligned_cols=151 Identities=13% Similarity=0.100 Sum_probs=97.9
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh-hH----HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD-AF----DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~-vf----d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
++|+.+.-|..+.++|.+..... +. +. +.++......++.++.+|++++ +++..++ ..+
T Consensus 5 ItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 5 VTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK------DQVFSAIDQAAEKFGGF 78 (254)
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHHcCCC
Confidence 56777777888888876522110 00 01 1111111234688999999998 6665543 357
Q ss_pred cEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|+|||+|+.... + +.++..+++|+.|+..+++++.+ ...-.++|++||...... .|
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~--- 145 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG----------NP--- 145 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC----------CC---
Confidence 999999987532 1 22346789999999888776643 122358999998644211 00
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-+.|+.+|+..|.+++... .++.+.+++|+.+..+
T Consensus 146 -------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 146 -------------------------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred -------------------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence 01469999999999887543 4789999999988655
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00013 Score=81.00 Aligned_cols=192 Identities=9% Similarity=0.015 Sum_probs=121.4
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
++|+.+.-|..+.++|.+.... -+. +.+.++......++.++.+|++++ +++..+++ .+
T Consensus 16 ItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 16 VTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE------EAVAAAFARIDAEHGRL 89 (256)
T ss_pred EECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH------HHHHHHHHHHHHhcCCC
Confidence 7888888899998888762211 001 111111111234688999999997 66655543 46
Q ss_pred cEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 75 NIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 75 DiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
|+|||+|+.... + +.++..+++|+.|+..+.+.+.+ + .+..++|++||...... .+
T Consensus 90 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~---- 155 (256)
T PRK06124 90 DILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA----------RA---- 155 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC----------CC----
Confidence 999999997532 1 23446789999999999977643 1 24578999999754211 00
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||...+.+++..+ .++.+..++|+.+.++...+ +.. .
T Consensus 156 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~---~~~----~ 204 (256)
T PRK06124 156 ------------------------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA---MAA----D 204 (256)
T ss_pred ------------------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh---hcc----C
Confidence 01469999999998877654 58999999999998874321 100 0
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..+...+... .+ ...++++++++.+++.++...
T Consensus 205 ~~~~~~~~~~----~~-----~~~~~~~~~~a~~~~~l~~~~ 237 (256)
T PRK06124 205 PAVGPWLAQR----TP-----LGRWGRPEEIAGAAVFLASPA 237 (256)
T ss_pred hHHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHcCcc
Confidence 1111111111 01 123788999999999877543
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.5e-05 Score=85.54 Aligned_cols=152 Identities=13% Similarity=0.072 Sum_probs=103.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH 79 (1217)
.=+||+.+.-|..+.++|.+.-.. -+.++-.+. .....++.++.+|++++ +++..+++ .+|+|||
T Consensus 9 ~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 9 VLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-TVDGRPAEFHAADVRDP------DQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-hhcCCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEE
Confidence 448999999999999999863222 112211100 11234688999999997 66666554 4699999
Q ss_pred cCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c---CCCCeEEEEcCcccccccccccccccCCCCChHHHHH
Q psy13944 80 VAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 80 ~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
+|+.... . +.++..+++|+.|+..+++.+.. + ....++|++||....... +
T Consensus 82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~-------- 143 (252)
T PRK07856 82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS----------P-------- 143 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC----------C--------
Confidence 9986422 1 22457889999999999998764 1 123589999997543210 0
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccC
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..|.+++..+ +.+.+..++|+.|..+
T Consensus 144 --------------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~ 183 (252)
T PRK07856 144 --------------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTE 183 (252)
T ss_pred --------------------CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccCh
Confidence 01469999999999987765 3477888899888665
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.9e-05 Score=83.65 Aligned_cols=154 Identities=16% Similarity=0.170 Sum_probs=104.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
=++|+.+.-|..+.++|.+.-.. .-.+.+.........++.++.+|++++ +++..+++ .
T Consensus 13 lItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 13 LVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY------QSIKAAVAHAETEAGT 86 (258)
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHHhcCC
Confidence 37888888888999888763211 001111111111234688999999987 66666554 5
Q ss_pred ccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CC--------CCeEEEEcCccccccccccccc
Q psy13944 74 VNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KN--------LDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 74 VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~--------lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
+|+|||+|+.... .+.++..+++|+.|+..+++.+... .. -.++|++||.......
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------ 160 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL------ 160 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC------
Confidence 8999999996432 1234577899999999999877521 11 2489999997653210
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
...+.|+.+|++.|.+++.++ .++++.++||+.|.++..
T Consensus 161 --------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 161 --------------------------------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred --------------------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 012469999999999887754 579999999999988753
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.90 E-value=4.1e-05 Score=85.65 Aligned_cols=149 Identities=13% Similarity=0.125 Sum_probs=104.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH 79 (1217)
.-+||+.+.-|....++|.+.....+ .+ |. .....++..+.+|++++ ++++.+++ .+|+|||
T Consensus 9 vlItGas~gIG~~ia~~l~~~G~~Vi~~~--r~--~~~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 9 AIVTGGSQGIGKAVVNRLKEEGSNVINFD--IK--EPSYNDVDYFKVDVSNK------EQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred EEEECCCchHHHHHHHHHHHCCCeEEEEe--CC--ccccCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEE
Confidence 44889999999999999987433211 22 11 11223688999999998 66655543 6899999
Q ss_pred cCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 80 VAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 80 ~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
+||...+ . +.++..+++|+.|+..+++.+.+. .+..++|++||...+... +
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--------- 139 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT----------R--------- 139 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC----------C---------
Confidence 9997432 1 234577899999999998887532 244689999997543210 0
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccC
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..|.+.+..+ +++.+..++|+.|-.+
T Consensus 140 -------------------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 140 -------------------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred -------------------CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 01469999999999887764 4488888999877655
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00032 Score=77.67 Aligned_cols=194 Identities=15% Similarity=0.111 Sum_probs=119.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.=+||+.+.-|.+..++|.+.... .-.+.+.++..+...++..+.+|+++. ++.+.++ .
T Consensus 11 vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 11 ALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM------EQIDALFAHIRERHG 84 (252)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 457898989999999998863221 001111111111223577899999987 6555443 3
Q ss_pred CccEEEEcCccCCc-----cc---CHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF-----DE---HFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-----~e---~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|+|+|+.... +. .++..+++|+.|+..+++.+.+. .+..++|++||.+..... +
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~- 153 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG----------D- 153 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC----------C-
Confidence 57999999986421 11 24468899999999888776321 345689999986442210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
.-..|+.||++.|.+++.++ .++++..+.|+.|-.+..... ..
T Consensus 154 ---------------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~---~~-- 201 (252)
T PRK07035 154 ---------------------------FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL---FK-- 201 (252)
T ss_pred ---------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc---cC--
Confidence 01369999999999988765 589999999998865532211 11
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. ........... + ...+...++++++++.++...
T Consensus 202 -~-~~~~~~~~~~~----~-----~~~~~~~~~va~~~~~l~~~~ 235 (252)
T PRK07035 202 -N-DAILKQALAHI----P-----LRRHAEPSEMAGAVLYLASDA 235 (252)
T ss_pred -C-HHHHHHHHccC----C-----CCCcCCHHHHHHHHHHHhCcc
Confidence 1 11111111110 1 122556789999998876543
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.2e-05 Score=85.83 Aligned_cols=163 Identities=15% Similarity=0.059 Sum_probs=100.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-----------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-----------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-----------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
.=+||+.+.-|..+.++|.+..... +. +.+.+.. ...++.++.+|+++. ++++.+++
T Consensus 19 vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~------~~v~~~~~~~~ 90 (306)
T PRK06197 19 AVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT--PGADVTLQELDLTSL------ASVRAAADALR 90 (306)
T ss_pred EEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC--CCCceEEEECCCCCH------HHHHHHHHHHH
Confidence 3388999999999999988742211 11 1111111 124688999999998 66665543
Q ss_pred ----CccEEEEcCccCCc-----ccCHHHHHHHHHHH----HHHHHHHhHhcCCCCeEEEEcCcccccccc-cccccccC
Q psy13944 73 ----DVNIVFHVAATVKF-----DEHFQTAFEINCKG----TEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-KIEEKFYE 138 (1217)
Q Consensus 73 ----~VDiViH~AA~v~f-----~e~l~~a~~vNV~G----T~~LLelAk~~~~lk~fV~vSTa~v~g~~~-~I~E~~y~ 138 (1217)
.+|+|||+||.... .+.++..+++|+.| +..+++.+++. +..++|++||...+.... ..++.
T Consensus 91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~~--- 166 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHRIRAAIHFDDL--- 166 (306)
T ss_pred hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHhccCCCCcccc---
Confidence 58999999997432 23455678999999 66677776653 446999999975432110 00000
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEE--ecceeccCC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIV--RPSIVMPVV 205 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIv--RPsiV~G~~ 205 (1217)
+.+ .. ......|+.||++.+.+.+.++ .++++.++ .||.|..+.
T Consensus 167 ---------------~~~--~~------~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 167 ---------------QWE--RR------YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred ---------------Ccc--cC------CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 000 00 0111469999999998887654 45555544 688776553
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.89 E-value=6e-05 Score=83.81 Aligned_cols=118 Identities=16% Similarity=0.231 Sum_probs=78.7
Q ss_pred HHHHHh--hcccccccccccc--cccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhc--Cc
Q psy13944 504 FFHLNL--HRSLSKYAIHVPD--LTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLRE--DV 577 (1217)
Q Consensus 504 ~Y~~~~--~~GirvYlLkr~~--stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~--~v 577 (1217)
.|+-.+ -.|-.||=++|.. .+..|. .+.+.+.. ...++.++.|||+|.. .+.++++ +.
T Consensus 16 sYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~---------~~~~l~l~~gDLtD~~------~l~r~l~~v~P 79 (345)
T COG1089 16 SYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHL---------NDPRLHLHYGDLTDSS------NLLRILEEVQP 79 (345)
T ss_pred HHHHHHHHhcCcEEEEEeeccccCCcccc-eecccccc---------CCceeEEEeccccchH------HHHHHHHhcCc
Confidence 366553 3466777777653 223333 33332221 1245899999999953 4555555 46
Q ss_pred cEEEEcCccc----cchhcHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEccceeecCcc--ccccc
Q psy13944 578 NIVFHVAATV----KFDEHFQTAFEINCKGTEKLLKMAEEMKN-LDSFIYVSTAYSNCNIK--KIEEK 638 (1217)
Q Consensus 578 dvVfH~AA~v----~f~~~~~~~~~~NV~GT~nLLelA~~~~~-lk~fV~vSTa~v~g~~~--~I~E~ 638 (1217)
|-|+|+||.. +|..+. ...+++..||.+|||+.|.... --+|.++||+..||... +..|.
T Consensus 80 dEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~ 146 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKET 146 (345)
T ss_pred hhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccC
Confidence 9999999974 455444 4567899999999999997632 35899999999999754 45555
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.2e-05 Score=85.85 Aligned_cols=118 Identities=16% Similarity=0.154 Sum_probs=81.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHH----HHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKG----TEKLLKM 610 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~G----T~nLLel 610 (1217)
.++.++.+|+++++ .++.++ ..+|+|||+|+.... .+.++..+++|+.| +.+++++
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~ 129 (262)
T PRK13394 56 GKAIGVAMDVTNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKH 129 (262)
T ss_pred ceEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 45788999999864 333333 348999999996432 22344678899999 7777887
Q ss_pred H-HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 611 A-EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 611 A-~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+ +.. +.++||++||.+.... .+ ..+.|+.||+..|.++++
T Consensus 130 ~~~~~-~~~~iv~~ss~~~~~~----------~~----------------------------~~~~y~~sk~a~~~~~~~ 170 (262)
T PRK13394 130 MYKDD-RGGVVIYMGSVHSHEA----------SP----------------------------LKSAYVTAKHGLLGLARV 170 (262)
T ss_pred HHhhc-CCcEEEEEcchhhcCC----------CC----------------------------CCcccHHHHHHHHHHHHH
Confidence 7 543 6789999999643311 00 113599999999999987
Q ss_pred hcccccccccccCCCceeEeccCccch
Q psy13944 690 FWGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 690 y~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+.+ +....++.+.+++|.++-.
T Consensus 171 la~-----~~~~~~i~v~~v~pg~v~~ 192 (262)
T PRK13394 171 LAK-----EGAKHNVRSHVVCPGFVRT 192 (262)
T ss_pred HHH-----HhhhcCeEEEEEeeCcccc
Confidence 641 1223578888889877753
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=8.9e-05 Score=82.51 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=83.0
Q ss_pred CCeEEEEccCCCCCCCCCHHHHHHhc-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc
Q psy13944 46 ERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 111 (1217)
Q Consensus 46 ~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~ 111 (1217)
.+++++.+|++++ +++..++ ..+|+|||+|+..... +.++..+++|+.|+..+++.+...
T Consensus 67 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 140 (256)
T PRK12748 67 VRCEHMEIDLSQP------YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQ 140 (256)
T ss_pred CeEEEEECCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4689999999987 5554433 3579999999875321 124567899999999999887532
Q ss_pred ---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc
Q psy13944 112 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM 188 (1217)
Q Consensus 112 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~ 188 (1217)
....++|++||...+++.. + -..|+.||++.|.+++..+
T Consensus 141 ~~~~~~~~iv~~ss~~~~~~~~-------------------------------------~-~~~Y~~sK~a~~~~~~~la 182 (256)
T PRK12748 141 YDGKAGGRIINLTSGQSLGPMP-------------------------------------D-ELAYAATKGAIEAFTKSLA 182 (256)
T ss_pred hhhcCCeEEEEECCccccCCCC-------------------------------------C-chHHHHHHHHHHHHHHHHH
Confidence 2335899999976543210 0 0359999999999887653
Q ss_pred -----CCCCEEEEecceeccC
Q psy13944 189 -----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 189 -----~gLPvvIvRPsiV~G~ 204 (1217)
.+++++.++|+.+..+
T Consensus 183 ~e~~~~~i~v~~i~Pg~~~t~ 203 (256)
T PRK12748 183 PELAEKGITVNAVNPGPTDTG 203 (256)
T ss_pred HHHHHhCeEEEEEEeCcccCC
Confidence 5899999999866544
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00016 Score=80.76 Aligned_cols=186 Identities=13% Similarity=0.087 Sum_probs=116.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------CC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ED 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------~~ 73 (1217)
.-+||+.+.-|..+.++|.+..... -.+.+..+. ....++.++.+|++++ +++..+. ..
T Consensus 8 vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 8 VLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSE------AGREAVLARAREMGG 80 (263)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCH------HHHHHHHHHHHhcCC
Confidence 4578888888888888887632210 011111111 1234788999999998 6555443 46
Q ss_pred ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|+|||+||...+. +.++..+++|+.|+.++++.+... .+..++|++||...... .+
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~--- 147 (263)
T PRK09072 81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG----------YP--- 147 (263)
T ss_pred CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC----------CC---
Confidence 79999999975431 224567889999999999888542 23357899988654211 00
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..+.+++..+ .++.++.+.|+.+-.+...+..
T Consensus 148 -------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-------- 194 (263)
T PRK09072 148 -------------------------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-------- 194 (263)
T ss_pred -------------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc--------
Confidence 01359999998777765543 5678888888866543211100
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. ... ......+..++++|++++.++...
T Consensus 195 ----------~---~~~--~~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 195 ----------Q---ALN--RALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred ----------c---ccc--ccccCCCCCHHHHHHHHHHHHhCC
Confidence 0 000 000113678899999999888754
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.7e-05 Score=82.59 Aligned_cols=180 Identities=12% Similarity=-0.003 Sum_probs=113.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--hH--------HHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhc-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--AF--------DRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLR----- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--vf--------d~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~----- 71 (1217)
.-.||+.+.-|....++|.+..... +. +.+.++... ...+++++.+|++++ ++++.++
T Consensus 11 vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~------~~~~~~~~~~~~ 84 (253)
T PRK07904 11 ILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDT------DSHPKVIDAAFA 84 (253)
T ss_pred EEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCCh------HHHHHHHHHHHh
Confidence 3478898899999999987643211 11 111111111 123689999999987 5433322
Q ss_pred -CCccEEEEcCccCCcc----cCH---HHHHHHHHHHHHH----HHHHhHhcCCCCeEEEEcCcccccccccccccccCC
Q psy13944 72 -EDVNIVFHVAATVKFD----EHF---QTAFEINCKGTEK----LLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f~----e~l---~~a~~vNV~GT~~----LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.++|++||+||..... ... ...+++|+.|+.. +++++++ .+..++|++||...... .
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~-~~~~~iv~isS~~g~~~----------~ 153 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA-QGFGQIIAMSSVAGERV----------R 153 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh-cCCceEEEEechhhcCC----------C
Confidence 3689999999875321 111 1468999999876 4556655 35579999999753111 0
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
+ ....|+.||+..+.+.+... .++++.+++|+.|..+....
T Consensus 154 ~----------------------------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~------ 199 (253)
T PRK07904 154 R----------------------------SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH------ 199 (253)
T ss_pred C----------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc------
Confidence 0 01259999999886654432 68999999999887652110
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.. . . .-.+..+++|+.++.++.+.
T Consensus 200 -~~-----------~-------~----~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 200 -AK-----------E-------A----PLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred -CC-----------C-------C----CCCCCHHHHHHHHHHHHHcC
Confidence 00 0 0 01468899999999887653
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=7e-05 Score=83.37 Aligned_cols=154 Identities=16% Similarity=0.169 Sum_probs=104.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-HH-----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-FD-----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-fd-----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
.=+||+.+.-|....++|.+.....+ .+ ...+.......++..+.+|++++ ++++.+++ .+
T Consensus 13 ~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 13 AVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKI------DGIPALLERAVAEFGHI 86 (253)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHHhCCC
Confidence 34889999999999999987322211 11 00011011134678899999987 66666554 58
Q ss_pred cEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---C-CCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---K-NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~-~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|++||+||..... +.++..+++|+.|+.++++.+... . .-.++|++||...+....
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 153 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI------------- 153 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-------------
Confidence 9999999975321 245688999999999999887542 1 124799999976543210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.+ ..|+.||++.|.+.+..+ .++.+..++|+.+-.+.
T Consensus 154 ------------------------~~-~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~ 195 (253)
T PRK08993 154 ------------------------RV-PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN 195 (253)
T ss_pred ------------------------CC-cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence 00 259999999988887654 57899999999886653
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00013 Score=80.60 Aligned_cols=153 Identities=14% Similarity=0.090 Sum_probs=101.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-h----HHHhh---hcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcC----Ccc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-A----FDRLR---KEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLRE----DVN 75 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr---~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----~VD 75 (1217)
-+||+.+.-|....++|.+..... + -+.+. ++. .....++.++.+|++++ ++++.+++ .+|
T Consensus 5 lItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~d 78 (243)
T PRK07102 5 LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDT------ASHAAFLDSLPALPD 78 (243)
T ss_pred EEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh------HHHHHHHHHHhhcCC
Confidence 367888888888888887632110 0 01111 100 01134789999999998 66665544 469
Q ss_pred EEEEcCccCCcc----cC---HHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKFD----EH---FQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f~----e~---l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+|+|+|+..... .. ....+++|+.|+.++++.+... .+..++|++||...... .+
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~----- 143 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----------RA----- 143 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----------CC-----
Confidence 999999875321 12 2357889999999999887542 24578999999643111 00
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
....|+.||+..+.+.+..+ .++++.+++|+.+.++.
T Consensus 144 -----------------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~ 185 (243)
T PRK07102 144 -----------------------SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPM 185 (243)
T ss_pred -----------------------CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChh
Confidence 00259999999988887653 58999999999888763
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=7.1e-05 Score=84.56 Aligned_cols=118 Identities=14% Similarity=0.096 Sum_probs=82.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ .+..+++ .+|+|||+|+..... +.++..+++|+.|+.++++.+..
T Consensus 50 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 123 (277)
T PRK06180 50 DRALARLLDVTDFD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPG 123 (277)
T ss_pred CCeeEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46888999999864 3433333 589999999975421 23446789999999999998643
Q ss_pred --cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 --MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 --~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
..+..++|++||..+.... | ....|+.||+..|.+++++.
T Consensus 124 ~~~~~~~~iv~iSS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 165 (277)
T PRK06180 124 MRARRRGHIVNITSMGGLITM----------P----------------------------GIGYYCGSKFALEGISESLA 165 (277)
T ss_pred HhccCCCEEEEEecccccCCC----------C----------------------------CcchhHHHHHHHHHHHHHHH
Confidence 1245689999997543220 0 01259999999999997754
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++....++.+.+++|..|-
T Consensus 166 -----~e~~~~gi~v~~i~Pg~v~ 184 (277)
T PRK06180 166 -----KEVAPFGIHVTAVEPGSFR 184 (277)
T ss_pred -----HHhhhhCcEEEEEecCCcc
Confidence 1112347889999998774
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0001 Score=82.89 Aligned_cols=149 Identities=10% Similarity=0.082 Sum_probs=100.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
-+||+.+.-|..+.++|.+... .+. +.+... ...++.++.+|++++ ++++.++ .++|
T Consensus 5 lItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id 74 (274)
T PRK05693 5 LITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEAL---AAAGFTAVQLDVNDG------AALARLAEELEAEHGGLD 74 (274)
T ss_pred EEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH---HHCCCeEEEeeCCCH------HHHHHHHHHHHHhcCCCC
Confidence 3688888888888888876321 111 111110 112577889999987 6665544 4689
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
+|||+|+..... +.++..+++|+.|+.++++.+... ++..++|++||...... .|
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------~~------ 138 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV----------TP------ 138 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC----------CC------
Confidence 999999964321 234578899999999999887431 23357999998654221 00
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
....|+.||+..|.+.+.++ .|+.+++++|+.|..+.
T Consensus 139 ----------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 139 ----------------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred ----------------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 11469999999888776543 58999999999987653
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=7.5e-05 Score=83.08 Aligned_cols=156 Identities=15% Similarity=0.154 Sum_probs=103.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.=+||+.+.-|....++|.+...+ ...+.+.++......++..+.+|++++ ++++.+++
T Consensus 11 ~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~ 84 (254)
T PRK06114 11 AFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSK------ADLRAAVARTEAEL 84 (254)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 448899999999999999873211 111111111111234678899999998 66655443
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+||..... +.++..+++|+.|+..+++.+.. + .+-.++|++||........ .
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------~-- 154 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNR--------G-- 154 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC--------C--
Confidence 469999999975321 23557889999999888776542 1 2345899999975422100 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.....|+.||+..+.+++..+ .++++.+++|+.+..+.
T Consensus 155 --------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~ 197 (254)
T PRK06114 155 --------------------------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM 197 (254)
T ss_pred --------------------------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence 001369999998888876654 68999999999887764
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0001 Score=78.95 Aligned_cols=170 Identities=18% Similarity=0.208 Sum_probs=108.3
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEEcCccCCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFHVAATVKF 86 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH~AA~v~f 86 (1217)
.||+.+.-|....++|.+- ..+.-.-|. + ..+.+|++++ ++++.+++ ++|+|||+||...+
T Consensus 5 ItGas~giG~~la~~l~~~--~~vi~~~r~--~------~~~~~D~~~~------~~~~~~~~~~~~id~lv~~ag~~~~ 68 (199)
T PRK07578 5 VIGASGTIGRAVVAELSKR--HEVITAGRS--S------GDVQVDITDP------ASIRALFEKVGKVDAVVSAAGKVHF 68 (199)
T ss_pred EEcCCcHHHHHHHHHHHhc--CcEEEEecC--C------CceEecCCCh------HHHHHHHHhcCCCCEEEECCCCCCC
Confidence 5777777888888888764 222111111 1 1467899988 66666554 68999999997432
Q ss_pred -------ccCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 87 -------DEHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 87 -------~e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
.+.+...+++|+.|+.++++++.. +..-.+++++||...... .|
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~----------~~------------------ 120 (199)
T PRK07578 69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP----------IP------------------ 120 (199)
T ss_pred CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC----------CC------------------
Confidence 123456788999999999998864 223357999988653211 00
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i 234 (1217)
.-..|+.||+..+.+.+..+ .++.+..+.|+.+-.+.. .. + ..+
T Consensus 121 ----------~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~------------------~~--~--~~~ 168 (199)
T PRK07578 121 ----------GGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE------------------KY--G--PFF 168 (199)
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh------------------hh--h--hcC
Confidence 01369999999888877654 467777788876532210 00 0 001
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
++ ...++.++++++++.++..
T Consensus 169 ~~-----~~~~~~~~~a~~~~~~~~~ 189 (199)
T PRK07578 169 PG-----FEPVPAARVALAYVRSVEG 189 (199)
T ss_pred CC-----CCCCCHHHHHHHHHHHhcc
Confidence 11 2368999999998877753
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00015 Score=81.33 Aligned_cols=195 Identities=16% Similarity=0.087 Sum_probs=120.2
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcCh-hH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADD-AF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~-vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
+..-+||+.+.-|....++|.+...+. +. +.+.+.......++.++.+|++++ +++..+++
T Consensus 11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~ 84 (263)
T PRK07814 11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHP------EATAGLAGQAVEA 84 (263)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHH
Confidence 335588998888999988887632110 01 111111111234688999999998 66655443
Q ss_pred --CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 --DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 --~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
++|+|||+|+.... + +.++..+++|+.|+.++++++... .+..++|++||...... .
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------~ 154 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA----------G 154 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC----------C
Confidence 68999999986432 1 234578899999999999998641 24468999999643211 0
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
...+.|+.||+..|.+++... +++.+..++|+.+..+.... ...
T Consensus 155 ----------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~----~~~ 202 (263)
T PRK07814 155 ----------------------------RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEV----VAA 202 (263)
T ss_pred ----------------------------CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh----ccC
Confidence 001469999999999887765 45778888888775542111 000
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
...+. ....+.. ....+...+|++++++.++..
T Consensus 203 ---~~~~~-~~~~~~~--------~~~~~~~~~~va~~~~~l~~~ 235 (263)
T PRK07814 203 ---NDELR-APMEKAT--------PLRRLGDPEDIAAAAVYLASP 235 (263)
T ss_pred ---CHHHH-HHHHhcC--------CCCCCcCHHHHHHHHHHHcCc
Confidence 01111 1111110 112356889999999887643
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=5.7e-05 Score=83.37 Aligned_cols=114 Identities=12% Similarity=0.157 Sum_probs=80.6
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc-------ch---hcHHHHHHHHHHHHHHHHHHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK-------FD---EHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~-------f~---~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
++..+.+|+++.. +++.+. ..+|+|||+|+... .. +.++..+++|+.|+.++++++.
T Consensus 56 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (250)
T PRK07774 56 TAIAVQVDVSDPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVY 129 (250)
T ss_pred cEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 5778899999854 333333 35899999999642 11 2334678899999999999988
Q ss_pred hc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 613 EM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 613 ~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.. .+..+||++||..++.. .+.|+.||++.|.++++
T Consensus 130 ~~~~~~~~~~iv~~sS~~~~~~-----------------------------------------~~~Y~~sK~a~~~~~~~ 168 (250)
T PRK07774 130 KHMAKRGGGAIVNQSSTAAWLY-----------------------------------------SNFYGLAKVGLNGLTQQ 168 (250)
T ss_pred HHHHHhCCcEEEEEecccccCC-----------------------------------------ccccHHHHHHHHHHHHH
Confidence 53 12458999999765421 12499999999999987
Q ss_pred hcccccccccccCCCceeEeccCccc
Q psy13944 690 FWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+. ++-...++.+.+++|-++-
T Consensus 169 l~-----~~~~~~~i~v~~v~pg~~~ 189 (250)
T PRK07774 169 LA-----RELGGMNIRVNAIAPGPID 189 (250)
T ss_pred HH-----HHhCccCeEEEEEecCccc
Confidence 64 1122457888888887664
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00013 Score=82.18 Aligned_cols=155 Identities=14% Similarity=0.132 Sum_probs=103.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH-------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD-------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd-------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.=+||+.+.-|..+.++|.+.... -+.+ .+.++......++.++.+|++++ +++..++ .
T Consensus 13 vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g 86 (278)
T PRK08277 13 AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK------ESLEQARQQILEDFG 86 (278)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 447888888999999999863221 1111 11111111224688999999998 6665543 3
Q ss_pred CccEEEEcCccCCc----------------------ccCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCccccc
Q psy13944 73 DVNIVFHVAATVKF----------------------DEHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNC 127 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----------------------~e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g 127 (1217)
.+|+|||+|+.... .+.++..+++|+.|+..+++.+.+ + .+-.++|++||...+.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 166 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT 166 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence 68999999995321 122457889999999876655432 1 2346899999976543
Q ss_pred ccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceec
Q psy13944 128 NIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVM 202 (1217)
Q Consensus 128 ~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~ 202 (1217)
... . -..|+.||+..|.+++.++ .++.+..++|+.|.
T Consensus 167 ~~~-------------------------------------~-~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~ 208 (278)
T PRK08277 167 PLT-------------------------------------K-VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFL 208 (278)
T ss_pred CCC-------------------------------------C-CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCc
Confidence 210 0 1359999999998887654 57999999999998
Q ss_pred cCCC
Q psy13944 203 PVVE 206 (1217)
Q Consensus 203 G~~~ 206 (1217)
.+..
T Consensus 209 t~~~ 212 (278)
T PRK08277 209 TEQN 212 (278)
T ss_pred Ccch
Confidence 8743
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=7.2e-05 Score=82.57 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=98.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh------HHHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA------FDRL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v------fd~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
-+||+.+.-|....++|.+.....+ -+.+ .++......++.++.+|++++ ++++.++ .
T Consensus 6 lItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 6 LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE------ADVIAMFDAVQSAFG 79 (248)
T ss_pred EEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCH------HHHHHHHHHHHHhcC
Confidence 3678888888888888876321110 0111 111111234688999999998 6655443 3
Q ss_pred CccEEEEcCccCCc----cc----CHHHHHHHHHHHHHHHHHHh-HhcCC-----CCeEEEEcCcccc-ccccccccccc
Q psy13944 73 DVNIVFHVAATVKF----DE----HFQTAFEINCKGTEKLLKMA-EEMKN-----LDSFIYVSTAYSN-CNIKKIEEKFY 137 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~e----~l~~a~~vNV~GT~~LLelA-k~~~~-----lk~fV~vSTa~v~-g~~~~I~E~~y 137 (1217)
.+|+|||+|+.... .+ .+...+++|+.|+..+++.+ ..+.. -.+||++||.... +...
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------- 152 (248)
T PRK06947 80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------- 152 (248)
T ss_pred CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-------
Confidence 68999999996421 11 23467899999999887544 33311 1259999996542 2100
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
. ...|+.||+..+.+++.++ .+++++++||+.+..+.
T Consensus 153 ------------------------------~-~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~ 194 (248)
T PRK06947 153 ------------------------------E-YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI 194 (248)
T ss_pred ------------------------------C-CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence 0 0259999999998876654 47999999999987763
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=8.8e-05 Score=83.26 Aligned_cols=153 Identities=14% Similarity=0.107 Sum_probs=101.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH----HHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF----DRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|..+.++|.+.... .+. +.+. ++......++.++.+|++++ +++..+++
T Consensus 12 ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 12 VVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY------AAVEAAFAQIADEFG 85 (264)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 447888888888888888763211 011 1111 11111224678899999987 66665543
Q ss_pred CccEEEEcCccCC---c----ccCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 DVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 ~VDiViH~AA~v~---f----~e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.+|+|||+|+... + .+.++..+++|+.|+.++++.+... +.-.++|++||...... .+
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~----------~~--- 152 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP----------MP--- 152 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC----------CC---
Confidence 4699999997532 1 1234567889999999999887642 11248999999654211 00
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||+..|.+++... .++.+..++|+.+.++
T Consensus 153 -------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t 193 (264)
T PRK07576 153 -------------------------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGT 193 (264)
T ss_pred -------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCc
Confidence 01369999999999987653 5789999999987653
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.81 E-value=5.9e-05 Score=82.96 Aligned_cols=119 Identities=14% Similarity=0.085 Sum_probs=83.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc----h---hcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f----~---~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|++++. +++.+++ .+|+|||+|+.... + +.+...+++|+.|+.++++.+..
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (251)
T PRK12826 55 GKARARQVDVRDRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPA 128 (251)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35889999999853 4444443 68999999987654 2 33456789999999999998852
Q ss_pred --cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 --MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 --~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
..+.++||++||..+.+. +.+ ....|+.||+.+|.++.++.
T Consensus 129 ~~~~~~~~ii~~ss~~~~~~---------~~~----------------------------~~~~y~~sK~a~~~~~~~~~ 171 (251)
T PRK12826 129 LIRAGGGRIVLTSSVAGPRV---------GYP----------------------------GLAHYAASKAGLVGFTRALA 171 (251)
T ss_pred HHHcCCcEEEEEechHhhcc---------CCC----------------------------CccHHHHHHHHHHHHHHHHH
Confidence 124678999999755411 000 01259999999999997764
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+ +....++++.+++|..+.
T Consensus 172 ~-----~~~~~~i~~~~i~pg~~~ 190 (251)
T PRK12826 172 L-----ELAARNITVNSVHPGGVD 190 (251)
T ss_pred H-----HHHHcCeEEEEEeeCCCC
Confidence 1 111347888889998875
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00033 Score=81.84 Aligned_cols=190 Identities=13% Similarity=0.069 Sum_probs=118.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.=+||+.+.-|....++|.+.... .-.+.+.++....-.++.++.+|++++ ++++.++ .
T Consensus 10 vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 83 (330)
T PRK06139 10 VVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDA------DQVKALATQAASFGG 83 (330)
T ss_pred EEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH------HHHHHHHHHHHHhcC
Confidence 347888888888888888763221 111111111112234678899999998 7776665 4
Q ss_pred CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|++||+|+...+ . +.++..+++|+.|+.++.+.+.. + .+..++|++||...+.. .|
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~----------~p-- 151 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA----------QP-- 151 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC----------CC--
Confidence 68999999997432 2 22446899999999998877642 1 23358999998754321 11
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHH----HHHHHHHhc--CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNA----CEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~----AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+. +|.+..+.. .++.++.+.|+.|..+..+. ..+.
T Consensus 152 --------------------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~----~~~~ 201 (330)
T PRK06139 152 --------------------------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH----GANY 201 (330)
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc----cccc
Confidence 11469999996 455544544 37889999999887763211 1010
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.+. .......++..+++|++++.++.++.
T Consensus 202 -----------~~~------~~~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 202 -----------TGR------RLTPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred -----------ccc------cccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 000 00111236789999999998886543
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00012 Score=81.61 Aligned_cols=154 Identities=11% Similarity=0.106 Sum_probs=104.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.=+||+.+.-|....++|.+.....+ -+.+.++....-.++.++.+|++++ ++++.+++
T Consensus 5 vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~ 78 (256)
T PRK12743 5 AIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDL------PEGAQALDKLIQRL 78 (256)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCH------HHHHHHHHHHHHHc
Confidence 34788888889999999987422111 1111111111234688999999998 66555443
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+|+..... +.+...+.+|+.|+..+++++... .+-.++|++||...... .+
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~----------~~ 148 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP----------LP 148 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC----------CC
Confidence 579999999975321 234578899999999999887642 11248999999643110 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
+ ...|+.+|+..+.+++..+ .++.+..++|+.+.++.
T Consensus 149 ---------------------------~-~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 149 ---------------------------G-ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred ---------------------------C-cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 0 1369999999998887654 57999999999998764
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=9.6e-05 Score=82.38 Aligned_cols=153 Identities=14% Similarity=0.115 Sum_probs=103.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-------HHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-------DRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-------d~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.=+||+.+.-|....++|.+..... +. +.+.++... ...++.++.+|++++ +++..+++
T Consensus 10 vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~ 83 (260)
T PRK07063 10 ALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA------ASVAAAVAAAEEA 83 (260)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCH------HHHHHHHHHHHHH
Confidence 4478888888999999998632221 11 111111111 234688999999998 66666554
Q ss_pred --CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 --DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 --~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+|+...+. +.++..+++|+.|+..+++.+.. + .+..++|++||....... +
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 153 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII----------P 153 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC----------C
Confidence 689999999975321 23457889999999998888753 1 234589999997542210 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||++.+.+.+..+ .++.+..++|+.|-.+
T Consensus 154 ----------------------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 154 ----------------------------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence 01359999999998887654 5789999999987655
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=6.2e-05 Score=84.17 Aligned_cols=150 Identities=15% Similarity=0.066 Sum_probs=103.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH~ 80 (1217)
.=+||+.+.-|..+.++|.+.....+.- -+........++..+.+|++++ ++++.+++ .+|+|||+
T Consensus 12 vlItG~s~gIG~~la~~l~~~G~~v~~~-~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~ 84 (266)
T PRK06171 12 IIVTGGSSGIGLAIVKELLANGANVVNA-DIHGGDGQHENYQFVPTDVSSA------EEVNHTVAEIIEKFGRIDGLVNN 84 (266)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEE-eCCccccccCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEEC
Confidence 4488999999999999997743322111 1111111224688899999998 66665543 57999999
Q ss_pred CccCCc----------------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 81 AATVKF----------------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 81 AA~v~f----------------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
||.... .+.++..+++|+.|+..+++++... .+-.++|++||....... +
T Consensus 85 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 153 (266)
T PRK06171 85 AGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS----------E- 153 (266)
T ss_pred CcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------C-
Confidence 996421 1224568899999999999888642 123479999997543210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceec
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVM 202 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~ 202 (1217)
.-..|+.||+..+.+++..+ .++.+.+++|+.+-
T Consensus 154 ---------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 154 ---------------------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred ---------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 01369999999998887654 58999999999874
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.78 E-value=8e-05 Score=78.48 Aligned_cols=110 Identities=13% Similarity=0.154 Sum_probs=83.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.||+.|+ +++...+.++|+|||+++...- .+.++.+++++|+++ +++++|++||+.+
T Consensus 39 ~~~~~~~~d~~d~------~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~ 101 (183)
T PF13460_consen 39 PGVEIIQGDLFDP------DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGV 101 (183)
T ss_dssp TTEEEEESCTTCH------HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTG
T ss_pred cccccceeeehhh------hhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeecccc
Confidence 5799999999885 4678888899999999975433 177889999999997 7999999999988
Q ss_pred ecCcccc-cccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCcee
Q psy13944 629 NCNIKKI-EEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVR 707 (1217)
Q Consensus 629 ~g~~~~I-~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~ 707 (1217)
+...... ... ....+..|...|..+|.++. ..+++.+
T Consensus 102 ~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~e~~~~------------~~~~~~~ 139 (183)
T PF13460_consen 102 YRDPPGLFSDE------------------------------DKPIFPEYARDKREAEEALR------------ESGLNWT 139 (183)
T ss_dssp TTTCTSEEEGG------------------------------TCGGGHHHHHHHHHHHHHHH------------HSTSEEE
T ss_pred CCCCCcccccc------------------------------cccchhhhHHHHHHHHHHHH------------hcCCCEE
Confidence 8753211 000 00111358899999998882 3489999
Q ss_pred EeccCccchh
Q psy13944 708 VCRNHPVGET 717 (1217)
Q Consensus 708 i~rp~~v~e~ 717 (1217)
++||..+-+.
T Consensus 140 ivrp~~~~~~ 149 (183)
T PF13460_consen 140 IVRPGWIYGN 149 (183)
T ss_dssp EEEESEEEBT
T ss_pred EEECcEeEeC
Confidence 9999988643
|
... |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00011 Score=81.37 Aligned_cols=120 Identities=19% Similarity=0.171 Sum_probs=83.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLL 608 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLL 608 (1217)
.++.++.+|+++++ ++..+++ ++|+|||+||.... .+.+...+++|+.|+.+++
T Consensus 56 ~~~~~~~~D~~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 129 (254)
T PRK12746 56 GKAFLIEADLNSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLI 129 (254)
T ss_pred CcEEEEEcCcCCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 46889999999854 3433322 58999999996431 1123467789999999999
Q ss_pred HHHHhc-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 609 KMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 609 elA~~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
+.+... .+..+||++||..++... + ....|+.||++.|.++
T Consensus 130 ~~~~~~~~~~~~~v~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~ 171 (254)
T PRK12746 130 QQTLPLLRAEGRVINISSAEVRLGF----------T----------------------------GSIAYGLSKGALNTMT 171 (254)
T ss_pred HHHHHHhhcCCEEEEECCHHhcCCC----------C----------------------------CCcchHhhHHHHHHHH
Confidence 998753 233589999998664321 0 1125999999999999
Q ss_pred hhhcccccccccccCCCceeEeccCccchh
Q psy13944 688 LSFWGCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 688 ~~y~~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
.++.+ +....++.+..++|..+...
T Consensus 172 ~~~~~-----~~~~~~i~v~~v~pg~~~t~ 196 (254)
T PRK12746 172 LPLAK-----HLGERGITVNTIMPGYTKTD 196 (254)
T ss_pred HHHHH-----HHhhcCcEEEEEEECCccCc
Confidence 77641 11235688888899887533
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00012 Score=80.82 Aligned_cols=123 Identities=14% Similarity=0.130 Sum_probs=81.4
Q ss_pred CcEEEEEcccCCCCCCCCH--HHHHHHhcCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH----hcC
Q psy13944 549 ERIVVLTADLQSDGLGLDE--KAKEVLREDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE----EMK 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~--~~~~~L~~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~----~~~ 615 (1217)
.++.++.+|+++++- +.. +.+......+|+|||+|+.... .+.++..++.|+.|+..+++.+. +.
T Consensus 50 ~~~~~~~~D~~~~~~-~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~- 127 (255)
T TIGR01963 50 GSVIYLVADVTKEDE-IADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ- 127 (255)
T ss_pred CceEEEECCCCCHHH-HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence 468999999998530 000 0122223468999999986432 22344677899999998888774 33
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
+.++||++||..++... + ....|+.||+..|.+++++.
T Consensus 128 ~~~~~v~~ss~~~~~~~----------~----------------------------~~~~y~~sk~a~~~~~~~~~---- 165 (255)
T TIGR01963 128 GWGRIINIASAHGLVAS----------P----------------------------FKSAYVAAKHGLIGLTKVLA---- 165 (255)
T ss_pred CCeEEEEEcchhhcCCC----------C----------------------------CCchhHHHHHHHHHHHHHHH----
Confidence 56799999997544321 0 01359999999999997654
Q ss_pred ccccccCCCceeEeccCccch
Q psy13944 696 SREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 696 ~~~~~~~~l~~~i~rp~~v~e 716 (1217)
++....++.+.++||..+-.
T Consensus 166 -~~~~~~~i~v~~i~pg~v~~ 185 (255)
T TIGR01963 166 -LEVAAHGITVNAICPGYVRT 185 (255)
T ss_pred -HHhhhcCeEEEEEecCcccc
Confidence 11223478888889987743
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.77 E-value=8e-05 Score=76.42 Aligned_cols=147 Identities=13% Similarity=0.093 Sum_probs=96.7
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhc------------CcccCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKE------------NANFTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~------------~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
.+|+.+.-|..+.++|.+.-...+...-|.. ......++.++.+|++++ +++..++
T Consensus 5 i~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~ 78 (180)
T smart00822 5 ITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADR------AALAAALAAIPAR 78 (180)
T ss_pred EEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCH------HHHHHHHHHHHHH
Confidence 4666666777777777542211111000000 001124677899999987 5555543
Q ss_pred -CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 72 -EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
..+|+|||+|+..... +.++..+++|+.|+.++++++++ .+.+++|++||....-. .+
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~ii~~ss~~~~~~----------~~--- 144 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD-LPLDFFVLFSSVAGVLG----------NP--- 144 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc-CCcceEEEEccHHHhcC----------CC---
Confidence 3469999999964321 23457899999999999999977 46789999999654211 00
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEeccee
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIV 201 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV 201 (1217)
.-..|+.+|...+.++.... .+++++.+.|+.+
T Consensus 145 -------------------------~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 145 -------------------------GQANYAAANAFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred -------------------------CchhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence 01359999999999997655 7899888888754
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00031 Score=80.38 Aligned_cols=196 Identities=11% Similarity=0.064 Sum_probs=122.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++.+. ..++..+.+|++++ ++++.++ .
T Consensus 12 vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 84 (296)
T PRK05872 12 VVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDL------AAMQAAAEEAVERFG 84 (296)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCH------HHHHHHHHHHHHHcC
Confidence 4488999999999999987632210 11112222111 23566777999997 6665543 4
Q ss_pred CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.+|+|||+||.... . +.++..+++|+.|+.++++.+... +...++|++||...+....
T Consensus 85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 151 (296)
T PRK05872 85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP------------- 151 (296)
T ss_pred CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-------------
Confidence 68999999997532 1 234578999999999999888541 1235899999976543210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+... .++.+.++.|+.+..+...... ..
T Consensus 152 -------------------------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~---~~--- 200 (296)
T PRK05872 152 -------------------------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDAD---AD--- 200 (296)
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcc---cc---
Confidence 01369999999999887653 6788999999887665322110 00
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
......+... .+ ....-.++.+|++++++.++....
T Consensus 201 -~~~~~~~~~~-~~------~p~~~~~~~~~va~~i~~~~~~~~ 236 (296)
T PRK05872 201 -LPAFRELRAR-LP------WPLRRTTSVEKCAAAFVDGIERRA 236 (296)
T ss_pred -chhHHHHHhh-CC------CcccCCCCHHHHHHHHHHHHhcCC
Confidence 0111111111 10 011236789999999998876533
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00022 Score=79.17 Aligned_cols=192 Identities=15% Similarity=0.095 Sum_probs=118.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-H-----HHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-F-----DRL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-f-----d~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
.=+||+.+.-|....++|.+.....+ . +.+ ..+......++..+..|+++. ++...++
T Consensus 7 ~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 80 (252)
T PRK12747 7 ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESL------HGVEALYSSLDNEL 80 (252)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCH------HHHHHHHHHHHHHh
Confidence 34788888899999999987322211 0 111 111111123567888999986 3332211
Q ss_pred ------CCccEEEEcCccCC---ccc----CHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCccccccccccccccc
Q psy13944 72 ------EDVNIVFHVAATVK---FDE----HFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 72 ------~~VDiViH~AA~v~---f~e----~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
..+|+|||+||... +.+ .++..+++|+.|+..+++.+.. +..-.++|++||.......
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 152 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-------- 152 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC--------
Confidence 26899999999642 221 2457888999999999987754 2223589999998653210
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
+ .-..|+.||+..+.+++..+ .++.+..+.|+.|.++.....
T Consensus 153 --~----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~--- 199 (252)
T PRK12747 153 --P----------------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL--- 199 (252)
T ss_pred --C----------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc---
Confidence 0 01369999999998887654 589999999999887643211
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
.. .+ ......... .....+..++|+++++..++.
T Consensus 200 ~~---~~--~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s 233 (252)
T PRK12747 200 LS---DP--MMKQYATTI--------SAFNRLGEVEDIADTAAFLAS 233 (252)
T ss_pred cc---CH--HHHHHHHhc--------CcccCCCCHHHHHHHHHHHcC
Confidence 00 00 111111110 012346789999999887654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=9.7e-05 Score=82.31 Aligned_cols=153 Identities=16% Similarity=0.139 Sum_probs=105.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-H-----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-F-----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-f-----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
.=+||+.+.-|..+.++|.+.....+ . +.+.+.......++.++.+|++++ ++++.+++ .+
T Consensus 11 ~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 11 AIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQ------KDIDSIVSQAVEVMGHI 84 (251)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCH------HHHHHHHHHHHHHcCCC
Confidence 34889999999999999987322211 1 111111112235688999999998 77766654 57
Q ss_pred cEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|++||+|+.... . +.++..+++|+.|+..+.+.+... +.-.++|++||...+....
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------- 151 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI------------- 151 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC-------------
Confidence 999999997532 1 235578899999999888876531 1125899999976533210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.. ..|+.||+..+.+++..+ .|+.+..++|+.|-.+
T Consensus 152 ------------------------~~-~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~ 192 (251)
T PRK12481 152 ------------------------RV-PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATD 192 (251)
T ss_pred ------------------------CC-cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccC
Confidence 00 259999999998887544 5899999999988654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00044 Score=76.87 Aligned_cols=192 Identities=16% Similarity=0.150 Sum_probs=120.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.-+||+.+.-|....++|.+.....+ .+.+.++......++.++.+|++++ ++++.++ .
T Consensus 12 vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g 85 (253)
T PRK05867 12 ALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQH------QQVTSMLDQVTAELG 85 (253)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH------HHHHHHHHHHHHHhC
Confidence 44889988889999999987422110 1111111111224688899999998 6665554 3
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c-C-C-CCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M-K-N-LDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~-~-~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+|+..... +.++..+++|+.|+..+++++.. + + + -.++|++||...... ..|
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~- 155 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVP- 155 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCC-
Confidence 689999999975321 23446788999999999988753 2 1 1 236899988643110 000
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
.....|+.||+..+.+++..+ .|+.+..++|+.|-.+..++.+
T Consensus 156 --------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~------ 203 (253)
T PRK05867 156 --------------------------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT------ 203 (253)
T ss_pred --------------------------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch------
Confidence 001369999999999887764 5899999999988665432211
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......... .+ ..-+...+|++++++.++..
T Consensus 204 ----~~~~~~~~~----~~-----~~r~~~p~~va~~~~~L~s~ 234 (253)
T PRK05867 204 ----EYQPLWEPK----IP-----LGRLGRPEELAGLYLYLASE 234 (253)
T ss_pred ----HHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHcCc
Confidence 111111111 11 12356789999998877653
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0001 Score=93.83 Aligned_cols=151 Identities=16% Similarity=0.108 Sum_probs=99.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhh---hcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLR---KENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr---~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|....++|.+..... +. +.+. ++... -..++..+.+|++++ +++..+++
T Consensus 417 vLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~------~~v~~a~~~i~~~ 490 (676)
T TIGR02632 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE------QAVKAAFADVALA 490 (676)
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH------HHHHHHHHHHHHh
Confidence 3488999999999999998732210 01 1111 11000 123577899999998 77766654
Q ss_pred --CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 --DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 --~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
++|+|||+||.... . +.++..+++|+.|...+.+.+. +...-.++|++||...... .
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~----------~ 560 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA----------G 560 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC----------C
Confidence 68999999997431 1 1245678899999877764443 2111247999999643211 1
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceec
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVM 202 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~ 202 (1217)
+ .-..|+.||++.|.+++.++ .++.+..++|+.|.
T Consensus 561 ~----------------------------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 561 K----------------------------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred C----------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 0 01469999999999998764 47899999999886
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00034 Score=78.73 Aligned_cols=195 Identities=13% Similarity=0.078 Sum_probs=113.2
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh-hH----HHhhh---cCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD-AF----DRLRK---ENA-NFTERIVVLTADLQSDGLGLDEKEKKVLR-------ED 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~---~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~ 73 (1217)
+||+.+.-|..+.++|.+..... +. +.+.+ +.. .....+.++.+|++++ ++...++ ..
T Consensus 5 ItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 5 VTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDY------DAVAAFAADIHAAHGS 78 (272)
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCH------HHHHHHHHHHHHhcCC
Confidence 57777777888888777632110 00 11111 100 1112355678999987 5554443 35
Q ss_pred ccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+||.... .+.++..+++|+.|+..+++.+.. .+...++|++||...... .
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~----------~--- 145 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA----------L--- 145 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC----------C---
Confidence 7999999986432 123457899999999999998742 122358999999643211 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHh----c-CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREK----M-DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~----~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
+.-..|+.||+..+.+.... . .++++++++|+.+.++..+... ..+..
T Consensus 146 -------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~ 198 (272)
T PRK07832 146 -------------------------PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVE--IAGVD 198 (272)
T ss_pred -------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhccc--ccccC
Confidence 01135999999666665433 2 6899999999999877432210 00000
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
............ .....+..+++|++++.++.+
T Consensus 199 ~~~~~~~~~~~~----------~~~~~~~~~~vA~~~~~~~~~ 231 (272)
T PRK07832 199 REDPRVQKWVDR----------FRGHAVTPEKAAEKILAGVEK 231 (272)
T ss_pred cchhhHHHHHHh----------cccCCCCHHHHHHHHHHHHhc
Confidence 000000000000 011257899999999988853
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00018 Score=79.68 Aligned_cols=154 Identities=14% Similarity=0.117 Sum_probs=102.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.=++|+.+.-|....++|.+.... -+. +.+.+.......++..+.+|++++ +++..+++
T Consensus 10 ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~g 83 (253)
T PRK06172 10 ALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRD------AEVKALVEQTIAAYG 83 (253)
T ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHHhC
Confidence 347888888999999999864221 001 111111112234688999999997 66665544
Q ss_pred CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+|+... +. +.++..+++|+.|+..+++.+.. + .+..++|++||...+....
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------- 152 (253)
T PRK06172 84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP----------- 152 (253)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------
Confidence 5699999998642 21 23456788999999877665432 1 2346899999976543210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
. -..|+.||+..|.+.+.++ .++.+..+.|+.|-.+.
T Consensus 153 --------------------------~-~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~ 194 (253)
T PRK06172 153 --------------------------K-MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM 194 (253)
T ss_pred --------------------------C-CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 0 1369999999988886654 57899999999886654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00022 Score=78.07 Aligned_cols=153 Identities=15% Similarity=0.113 Sum_probs=101.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc---CCccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR---EDVNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---~~VDiVi 78 (1217)
.=+||+.+.-|....++|.+.-.+.+. +.+.+...+ ..+.++.+|++++ +.+..++ ..+|+||
T Consensus 9 vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~--~~~~~~~~D~~~~------~~~~~~~~~~~~id~li 80 (237)
T PRK12742 9 VLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE--TGATAVQTDSADR------DAVIDVVRKSGALDILV 80 (237)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH--hCCeEEecCCCCH------HHHHHHHHHhCCCcEEE
Confidence 448899999999999998864222111 111110011 1356788999887 5554443 3589999
Q ss_pred EcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 79 HVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 79 H~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
|+|+..... +.++..+++|+.|+..++..+.+ +..-.++|++||...... +.+
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------~~~---------- 141 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM---------PVA---------- 141 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC---------CCC----------
Confidence 999875321 23457899999999998755543 333468999999653100 000
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.-..|+.||+..|.+++..+ .++.+.+++|+.+..+.
T Consensus 142 ------------------~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~ 183 (237)
T PRK12742 142 ------------------GMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDA 183 (237)
T ss_pred ------------------CCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence 01469999999999887654 57999999999886653
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00014 Score=80.59 Aligned_cols=118 Identities=18% Similarity=0.196 Sum_probs=83.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc---------hhcHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f---------~~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.++.++.+|++++. ++..++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 125 (256)
T PRK12745 52 VEVIFFPADVADLS------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVA 125 (256)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 46899999999854 333332 368999999986431 24455788999999999998875
Q ss_pred hc----CC-----CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHH
Q psy13944 613 EM----KN-----LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAW 683 (1217)
Q Consensus 613 ~~----~~-----lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lA 683 (1217)
.. .+ ..+||++||..+..... ....|+.||++.
T Consensus 126 ~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~ 167 (256)
T PRK12745 126 KRMLAQPEPEELPHRSIVFVSSVNAIMVSP--------------------------------------NRGEYCISKAGL 167 (256)
T ss_pred HHHHhccCcCCCCCcEEEEECChhhccCCC--------------------------------------CCcccHHHHHHH
Confidence 42 11 46799999976532210 112599999999
Q ss_pred HHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 684 YIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 684 E~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
|.+++++.. +...+++.+..++|.++.
T Consensus 168 ~~~~~~l~~-----~~~~~gi~v~~i~pg~v~ 194 (256)
T PRK12745 168 SMAAQLFAA-----RLAEEGIGVYEVRPGLIK 194 (256)
T ss_pred HHHHHHHHH-----HHHHhCCEEEEEecCCCc
Confidence 999987641 112467899999998875
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00011 Score=81.57 Aligned_cols=136 Identities=14% Similarity=0.135 Sum_probs=88.0
Q ss_pred EEEEccCCCCCCCCCHHHHHHhcC----CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCc
Q psy13944 49 VVLTADLQSDGLGLDEKEKKVLRE----DVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTA 123 (1217)
Q Consensus 49 ~~V~GDl~d~~LGLs~edl~~L~~----~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa 123 (1217)
.++.+|+++. ++++.+++ ++|+|||+||... ..+++..+++|+.|+..+++++... ..-.++|++||.
T Consensus 26 ~~~~~Dl~~~------~~v~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~ 98 (241)
T PRK12428 26 GFIQADLGDP------ASIDAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASL 98 (241)
T ss_pred HhhcccCCCH------HHHHHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcH
Confidence 4578999987 77776654 5899999999764 3567889999999999999998752 222589999998
Q ss_pred cccccccc--ccccccCCCCChHHHHHHhhcCCcc-cccccccccCCCCCChHHHHHHHHHHHHHHh-----c-CCCCEE
Q psy13944 124 YSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHT-ELTVLNDILIKPMPNTYTLSKNACEQMVREK-----M-DKLPLG 194 (1217)
Q Consensus 124 ~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~-~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~-----~-~gLPvv 194 (1217)
..++.... ..|.. .+..+.+ ....... .....-..|+.||+..+.+.+.. . .|+.+.
T Consensus 99 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~-~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn 164 (241)
T PRK12428 99 AGAEWPQRLELHKAL-------------AATASFDEGAAWLAA-HPVALATGYQLSKEALILWTMRQAQPWFGARGIRVN 164 (241)
T ss_pred HhhccccchHHHHhh-------------hccchHHHHHHhhhc-cCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEE
Confidence 87653210 00000 0000000 0000000 00111257999999998876543 2 579999
Q ss_pred EEecceeccCC
Q psy13944 195 IVRPSIVMPVV 205 (1217)
Q Consensus 195 IvRPsiV~G~~ 205 (1217)
.++|+.|.++.
T Consensus 165 ~v~PG~v~T~~ 175 (241)
T PRK12428 165 CVAPGPVFTPI 175 (241)
T ss_pred EeecCCccCcc
Confidence 99999998774
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00014 Score=82.04 Aligned_cols=117 Identities=17% Similarity=0.123 Sum_probs=82.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++..+.+|++++. +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 122 (275)
T PRK08263 49 DRLLPLALDVTDRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122 (275)
T ss_pred CCeeEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35788899999854 333332 367999999997543 2355678899999998888876
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..++|++||..++... | ....|+.||+..|.++.++
T Consensus 123 ~~~~-~~~~iv~vsS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l 163 (275)
T PRK08263 123 LREQ-RSGHIIQISSIGGISAF----------P----------------------------MSGIYHASKWALEGMSEAL 163 (275)
T ss_pred HHhc-CCCEEEEEcChhhcCCC----------C----------------------------CccHHHHHHHHHHHHHHHH
Confidence 333 46789999997654421 0 0125999999999998776
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.. +....++.+.+++|.++.
T Consensus 164 a~-----e~~~~gi~v~~v~Pg~~~ 183 (275)
T PRK08263 164 AQ-----EVAEFGIKVTLVEPGGYS 183 (275)
T ss_pred HH-----HhhhhCcEEEEEecCCcc
Confidence 41 112358899999998875
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0003 Score=78.10 Aligned_cols=154 Identities=17% Similarity=0.066 Sum_probs=101.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++.+.+++
T Consensus 9 ~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 9 AIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE------AYAKALVALAVERFG 82 (254)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHhcC
Confidence 4478888888999988888632210 01111111111224688899999998 66665554
Q ss_pred CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~--------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+|+..... +.++..+++|+.|+..+.+.+... .+-.++|++||...+... .+
T Consensus 83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~---------~~- 152 (254)
T PRK07478 83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG---------FP- 152 (254)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC---------CC-
Confidence 689999999975321 224578999999888776654321 234589999997543210 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
. -..|+.||++.+.+++..+ .++.+..++|+.|-.+
T Consensus 153 --------------------------~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 153 --------------------------G-MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193 (254)
T ss_pred --------------------------C-cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence 0 1369999999998887654 4789999999988655
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00018 Score=80.13 Aligned_cols=153 Identities=19% Similarity=0.222 Sum_probs=105.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh------------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD------------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR---- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~------------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---- 71 (1217)
.-++|+.+.-|..+.++|.+...+- ..+.++...+ ..++.++.+|++++ +++..++
T Consensus 12 ~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~------~~~~~~~~~~~ 83 (257)
T PRK09242 12 ALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP--EREVHGLAADVSDD------EDRRAILDWVE 83 (257)
T ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC--CCeEEEEECCCCCH------HHHHHHHHHHH
Confidence 4478888888889999988632210 1111111111 24688999999987 5554443
Q ss_pred ---CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccC
Q psy13944 72 ---EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 72 ---~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
..+|+|||+|+.... .+.++..+.+|+.|+..+++++.. + .+..++|++||.....+..
T Consensus 84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-------- 155 (257)
T PRK09242 84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVR-------- 155 (257)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCC--------
Confidence 457999999997321 123557899999999999888753 1 2446899999976543210
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
....|+.||...+.+++..+ .++++..++|+.+.++..
T Consensus 156 ------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~ 198 (257)
T PRK09242 156 ------------------------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT 198 (257)
T ss_pred ------------------------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence 01359999999999887654 579999999999887754
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00012 Score=80.62 Aligned_cols=121 Identities=13% Similarity=0.182 Sum_probs=84.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++++|+++++ +++.++ ..+|+|||+|+... + .+.++..+++|+.|+.++++.+...
T Consensus 52 ~~~~~~~~d~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (250)
T TIGR03206 52 GNAQAFACDITDRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPG 125 (250)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999853 344443 35899999998532 1 1223467889999999998887531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||..++.... ....|+.||++.|.+++++.
T Consensus 126 ~~~~~~~~ii~iss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la 167 (250)
T TIGR03206 126 MVERGAGRIVNIASDAARVGSS--------------------------------------GEAVYAACKGGLVAFSKTMA 167 (250)
T ss_pred HHhcCCeEEEEECchhhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHH
Confidence 2457899999976654310 01259999999899987764
Q ss_pred ccccccccccCCCceeEeccCccchhh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
++....++.+.+++|.++.+.+
T Consensus 168 -----~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 168 -----REHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred -----HHHhHhCcEEEEEecCcccchh
Confidence 1222457899999998886554
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00037 Score=78.69 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=97.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHH--------------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDR--------------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~--------------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~ 72 (1217)
.=.||+.+.-|..+.++|.+...+ -+.++ +.++....-.++.++.+|++++ +++..+++
T Consensus 9 vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~------~~i~~~~~ 82 (273)
T PRK08278 9 LFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDE------DQVAAAVA 82 (273)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHH
Confidence 347888888888888888763221 11111 0111111224688999999998 76665544
Q ss_pred -------CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccc
Q psy13944 73 -------DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 73 -------~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
.+|+|||+||.... . +.++..+++|+.|+.++++++... .+-.++|++||......
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------- 155 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP------- 155 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc-------
Confidence 68999999997532 1 123567889999999999999642 12247888887431100
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPS 199 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPs 199 (1217)
.+. +.-..|+.||++.|.+++.++ .++.+..+.|+
T Consensus 156 ~~~-----------------------------~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg 195 (273)
T PRK08278 156 KWF-----------------------------APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPR 195 (273)
T ss_pred ccc-----------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCC
Confidence 000 001469999999999998765 47888888887
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00016 Score=80.35 Aligned_cols=122 Identities=11% Similarity=0.107 Sum_probs=82.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh---cCccEEEEcCccccc---------hhcHHHHHHHHHHHHHHHHHHHHhc--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR---EDVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAEEM-- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~---~~vdvVfH~AA~v~f---------~~~~~~~~~~NV~GT~nLLelA~~~-- 614 (1217)
.++.++.+|+++++- + .+.++.+. ..+|+|||+||.... .+.+...+++|+.|+.++++.+...
T Consensus 56 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (255)
T PRK05717 56 ENAWFIAMDVADEAQ-V-AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLR 133 (255)
T ss_pred CceEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 468899999998641 0 01122222 247999999996532 1234478899999999999999641
Q ss_pred CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccc
Q psy13944 615 KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCA 694 (1217)
Q Consensus 615 ~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a 694 (1217)
+...++|++||...... .+ ..+.|+.||+..|.+++++.
T Consensus 134 ~~~g~ii~~sS~~~~~~----------~~----------------------------~~~~Y~~sKaa~~~~~~~la--- 172 (255)
T PRK05717 134 AHNGAIVNLASTRARQS----------EP----------------------------DTEAYAASKGGLLALTHALA--- 172 (255)
T ss_pred HcCcEEEEEcchhhcCC----------CC----------------------------CCcchHHHHHHHHHHHHHHH---
Confidence 12357999998654321 00 11359999999999998765
Q ss_pred cccccccCCCceeEeccCccch
Q psy13944 695 RSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 695 ~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+.++.++.+..++|.++-.
T Consensus 173 ---~~~~~~i~v~~i~Pg~i~t 191 (255)
T PRK05717 173 ---ISLGPEIRVNAVSPGWIDA 191 (255)
T ss_pred ---HHhcCCCEEEEEecccCcC
Confidence 3455567777888887743
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00024 Score=79.54 Aligned_cols=156 Identities=13% Similarity=0.104 Sum_probs=105.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhh---cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRK---ENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~---~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.=+||+.+.-|..+.++|.+..... +. +.+.+ .......++.++.+|++++ ++++.+++
T Consensus 13 ~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 13 ALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDE------DGVQAMVSQIEKEVG 86 (265)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHhCC
Confidence 4588999999999999998632221 11 11111 1111224688999999998 66655543
Q ss_pred CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+||.... + +.+...+++|+.|+..+++.+.. + .+..++|++||...... .
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~--- 153 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG----------R--- 153 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC----------C---
Confidence 47999999998532 1 22446788999999988777643 1 24568999999643111 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEE 207 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~e 207 (1217)
.....|+.||+..+.+++.++ .++.+..++|+.|..+...
T Consensus 154 -------------------------~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 198 (265)
T PRK07097 154 -------------------------ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTA 198 (265)
T ss_pred -------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchh
Confidence 001369999999999987765 5799999999999887543
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00016 Score=80.96 Aligned_cols=153 Identities=17% Similarity=0.161 Sum_probs=103.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHH----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFD----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.=+||+.+.-|....++|.+..... +.+ .+.+.......++.++.+|++++ +++..+++ .+|
T Consensus 9 vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 9 AIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDD------AAIERAVATVVARFGRVD 82 (261)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCH------HHHHHHHHHHHHHhCCCC
Confidence 4478988889999999998732211 111 11111112235688999999998 77665554 579
Q ss_pred EEEEcCccCC---cc---cCHHHHHHHHHHHHHHHHHHhHh-c-CCCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 76 IVFHVAATVK---FD---EHFQTAFEINCKGTEKLLKMAEE-M-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 76 iViH~AA~v~---f~---e~l~~a~~vNV~GT~~LLelAk~-~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
++||+|+... +. +.++..+++|+.|+..+++.+.. + +.-.++|++||...... .+
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------~~------- 145 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFA----------QT------- 145 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccC----------CC-------
Confidence 9999998642 22 23457889999999999988753 2 23358999999654211 00
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
. -..|+.+|+..+.+.+..+ .++.+..++|+.+..+
T Consensus 146 --------------------~-~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 146 --------------------G-RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred --------------------C-CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence 0 1359999999998887654 5799999999977654
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00015 Score=78.55 Aligned_cols=170 Identities=15% Similarity=0.086 Sum_probs=113.3
Q ss_pred ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcC
Q psy13944 43 NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 122 (1217)
Q Consensus 43 ~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vST 122 (1217)
.+...+.++.||....+ -+.....++..|+-+++-.+ ....+..+|=....+-.++|.+ .++++|||+|-
T Consensus 93 sw~~~vswh~gnsfssn------~~k~~l~g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~-~gv~~fvyISa 162 (283)
T KOG4288|consen 93 SWPTYVSWHRGNSFSSN------PNKLKLSGPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAK-AGVPRFVYISA 162 (283)
T ss_pred CCCcccchhhccccccC------cchhhhcCCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHH-cCCceEEEEEh
Confidence 35567888888876542 23334466777777766532 3345677787777788888888 59999999998
Q ss_pred cccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceec
Q psy13944 123 AYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVM 202 (1217)
Q Consensus 123 a~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~ 202 (1217)
..-.- +| -.|.+|-.+|..||.-+..... +.-+|+||+.+|
T Consensus 163 ~d~~~-----------~~---------------------------~i~rGY~~gKR~AE~Ell~~~~-~rgiilRPGFiy 203 (283)
T KOG4288|consen 163 HDFGL-----------PP---------------------------LIPRGYIEGKREAEAELLKKFR-FRGIILRPGFIY 203 (283)
T ss_pred hhcCC-----------CC---------------------------ccchhhhccchHHHHHHHHhcC-CCceeeccceee
Confidence 53211 11 1245799999999988877653 777999999999
Q ss_pred cCCCCCCcccccccchhHHHHHHHhcCc---eeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGI---MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 203 G~~~eP~pGWidn~~g~~~li~~~~~G~---l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
|.+ ++.|--..+......+..+.++. +..++.-+...+.-|+|++||.+.+.|+.++.-
T Consensus 204 g~R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f 265 (283)
T KOG4288|consen 204 GTR--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDF 265 (283)
T ss_pred ccc--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCc
Confidence 984 33332222222223333334443 233444567788899999999999999887665
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00017 Score=88.88 Aligned_cols=116 Identities=12% Similarity=0.108 Sum_probs=83.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch-hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~-~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+++++.||+++. +++..++.++|+|||+||..... ..+...+++|+.|+.+|+++|++. ++++||++||..
T Consensus 138 ~~v~iV~gDLtD~------esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSig 210 (576)
T PLN03209 138 EKLEIVECDLEKP------DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLG 210 (576)
T ss_pred CceEEEEecCCCH------HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccch
Confidence 4689999999984 35777778999999999865311 134456789999999999999987 789999999986
Q ss_pred eecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCcee
Q psy13944 628 SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVR 707 (1217)
Q Consensus 628 v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~ 707 (1217)
++.. ...+..+ .....|...|..+|..+. ..++.+.
T Consensus 211 a~~~--g~p~~~~------------------------------~sk~~~~~~KraaE~~L~------------~sGIrvT 246 (576)
T PLN03209 211 TNKV--GFPAAIL------------------------------NLFWGVLCWKRKAEEALI------------ASGLPYT 246 (576)
T ss_pred hccc--Cccccch------------------------------hhHHHHHHHHHHHHHHHH------------HcCCCEE
Confidence 5311 0000000 001247778888888773 2479999
Q ss_pred EeccCccc
Q psy13944 708 VCRNHPVG 715 (1217)
Q Consensus 708 i~rp~~v~ 715 (1217)
++||..+.
T Consensus 247 IVRPG~L~ 254 (576)
T PLN03209 247 IVRPGGME 254 (576)
T ss_pred EEECCeec
Confidence 99998774
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00022 Score=79.20 Aligned_cols=151 Identities=12% Similarity=0.106 Sum_probs=100.2
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh-hH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD-AF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~-vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
+||+.+.-|....++|.+..... +. +.+.++......++.++.+|++++ ++++.++ ..+
T Consensus 6 ItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 6 ITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP------EDVQKMVEQIDEKFGRI 79 (252)
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHHHhCCc
Confidence 67888888888888887632110 11 111111111225788999999997 6666544 357
Q ss_pred cEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|+|||+|+... +. +.++..+++|+.|+.++++++.+. .+ ..++|++||.+.....
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------------- 145 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG-------------- 145 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC--------------
Confidence 99999998532 11 124578999999999999988431 12 3589999987542210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHh----c--CCCCEEEEecceeccC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREK----M--DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~----~--~gLPvvIvRPsiV~G~ 204 (1217)
.....|+.||+..+.+.+.. . .|+++..++|+.+..+
T Consensus 146 ------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 146 ------------------------PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred ------------------------CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 01135999999988887753 2 4899999999988753
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00016 Score=80.52 Aligned_cols=121 Identities=16% Similarity=0.105 Sum_probs=82.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 61 ~~~~~~~~Dl~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (259)
T PRK08213 61 IDALWIAADVADEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKR 134 (259)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence 46888999999864 343322 358999999996421 2334467889999999999987643
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++..+||++||...+....+ .. .....|+.||++.|.+++++
T Consensus 135 ~l~~~~~~~~v~~sS~~~~~~~~~---~~-------------------------------~~~~~Y~~sKa~~~~~~~~~ 180 (259)
T PRK08213 135 SMIPRGYGRIINVASVAGLGGNPP---EV-------------------------------MDTIAYNTSKGAVINFTRAL 180 (259)
T ss_pred HHHhcCCeEEEEECChhhccCCCc---cc-------------------------------cCcchHHHHHHHHHHHHHHH
Confidence 24568999999755432110 00 01135999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+.+++|..+.
T Consensus 181 a------~~~~~~gi~v~~v~Pg~~~ 200 (259)
T PRK08213 181 A------AEWGPHGIRVNAIAPGFFP 200 (259)
T ss_pred H------HHhcccCEEEEEEecCcCC
Confidence 5 222 346778888887664
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00021 Score=78.16 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=83.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE-- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~-- 612 (1217)
.++.++.+|+++++ ++..++ .++|+|||+||.... .+.+...+++|+.|+.++++.+.
T Consensus 56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (249)
T PRK12825 56 RRAQAVQADVTDKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP 129 (249)
T ss_pred CceEEEECCcCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999854 344433 368999999996432 22345678899999999998884
Q ss_pred --hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 613 --EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 613 --~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+. +.++||++||..++... + ....|+.||+..|.++..+
T Consensus 130 ~~~~-~~~~~i~~SS~~~~~~~----------~----------------------------~~~~y~~sK~~~~~~~~~~ 170 (249)
T PRK12825 130 MRKQ-RGGRIVNISSVAGLPGW----------P----------------------------GRSNYAAAKAGLVGLTKAL 170 (249)
T ss_pred HHhc-CCCEEEEECccccCCCC----------C----------------------------CchHHHHHHHHHHHHHHHH
Confidence 33 57899999997665321 0 0125999999999999776
Q ss_pred cccccccccccCCCceeEeccCccch
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
.+ +....++.+.++||..+-.
T Consensus 171 ~~-----~~~~~~i~~~~i~pg~~~~ 191 (249)
T PRK12825 171 AR-----ELAEYGITVNMVAPGDIDT 191 (249)
T ss_pred HH-----HHhhcCeEEEEEEECCccC
Confidence 41 1123578889999977753
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0012 Score=73.79 Aligned_cols=215 Identities=14% Similarity=0.091 Sum_probs=145.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhh--cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRK--ENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~--~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
-++|+.++-|..+.++|.+-... +--..|. ........+.++.+|+.++ ..+...+++++.++++.+...
T Consensus 4 lV~GatG~~G~~~~~~L~~~~~~-v~~~~r~~~~~~~~~~~v~~~~~d~~~~------~~l~~a~~G~~~~~~i~~~~~- 75 (275)
T COG0702 4 LVTGATGFVGGAVVRELLARGHE-VRAAVRNPEAAAALAGGVEVVLGDLRDP------KSLVAGAKGVDGVLLISGLLD- 75 (275)
T ss_pred EEEecccchHHHHHHHHHhCCCE-EEEEEeCHHHHHhhcCCcEEEEeccCCH------hHHHHHhccccEEEEEecccc-
Confidence 47899999999999999986332 1111111 0111126789999999999 889999999999999999776
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccC
Q psy13944 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILI 166 (1217)
Q Consensus 87 ~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~ 166 (1217)
.+. ........+..+..+.+. ..+++++++|...+..
T Consensus 76 ~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~--------------------------------------- 112 (275)
T COG0702 76 GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADA--------------------------------------- 112 (275)
T ss_pred ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCC---------------------------------------
Confidence 444 234445555556666555 3577888888865421
Q ss_pred CCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecccc
Q psy13944 167 KPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVP 246 (1217)
Q Consensus 167 ~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~Vp 246 (1217)
.-+..|..+|..+|+++.. .+++.+++|+...+...... ........+......+ ......+.
T Consensus 113 -~~~~~~~~~~~~~e~~l~~--sg~~~t~lr~~~~~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~~i~ 175 (275)
T COG0702 113 -ASPSALARAKAAVEAALRS--SGIPYTTLRRAAFYLGAGAA------------FIEAAEAAGLPVIPRG--IGRLSPIA 175 (275)
T ss_pred -CCccHHHHHHHHHHHHHHh--cCCCeEEEecCeeeeccchh------------HHHHHHhhCCceecCC--CCceeeeE
Confidence 0124699999999999988 47898999966665543211 0222333343332233 33778999
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 247 GDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 247 VDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
++|++.++..+...+.. .+++|.++.. .++..+.++.+....|++
T Consensus 176 ~~d~a~~~~~~l~~~~~---------------------------------~~~~~~l~g~~~~~~~~~~~~l~~~~gr~ 221 (275)
T COG0702 176 VDDVAEALAAALDAPAT---------------------------------AGRTYELAGPEALTLAELASGLDYTIGRP 221 (275)
T ss_pred HHHHHHHHHHHhcCCcc---------------------------------cCcEEEccCCceecHHHHHHHHHHHhCCc
Confidence 99999998877654433 2566777765 778888888888888876
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00022 Score=78.20 Aligned_cols=189 Identities=11% Similarity=0.011 Sum_probs=114.8
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh-hH-----H---HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD-AF-----D---RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------ED 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~-vf-----d---~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~ 73 (1217)
+||+.+.-|....++|.+.-.+. +. + .+.++......++.++.+|++++ +++..++ ..
T Consensus 3 ItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01831 3 VTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADR------VACRTLLEADIAEHGA 76 (239)
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCH------HHHHHHHHHHHHHcCC
Confidence 46777777888888887532211 00 1 11111111234689999999998 6655544 34
Q ss_pred ccEEEEcCccCC---c----ccCHHHHHHHHHHHHHHHHHHhH-hc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAE-EM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~---f----~e~l~~a~~vNV~GT~~LLelAk-~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|++||+|+... + .+.++..+++|+.|+.++++.+. .+ .+..++|++||...... .+
T Consensus 77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------~~-- 144 (239)
T TIGR01831 77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG----------NR-- 144 (239)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC----------CC--
Confidence 699999998642 1 22345789999999999988752 11 23468999999643211 00
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ .++++..++|+.+.++.....+.
T Consensus 145 --------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------ 192 (239)
T TIGR01831 145 --------------------------GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH------ 192 (239)
T ss_pred --------------------------CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhH------
Confidence 00259999998877765543 58999999999987764322111
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
........ . + ..-+...+|++++++.++...
T Consensus 193 ----~~~~~~~~-~---~-----~~~~~~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 193 ----DLDEALKT-V---P-----MNRMGQPAEVASLAGFLMSDG 223 (239)
T ss_pred ----HHHHHHhc-C---C-----CCCCCCHHHHHHHHHHHcCch
Confidence 01111111 0 0 112456699999988876643
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00019 Score=80.25 Aligned_cols=154 Identities=19% Similarity=0.113 Sum_probs=101.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
.=+||+.+.-|....++|.+..... + -+.+.+.......++..+.+|++++ ++...++ ..+|
T Consensus 8 vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 8 VLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSL------DDHKEAVARCVAAFGKID 81 (262)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCH------HHHHHHHHHHHHHhCCCC
Confidence 3478888889999999998743221 1 1111111111234688899999987 5555444 3679
Q ss_pred EEEEcCccCC----cc--------cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 76 IVFHVAATVK----FD--------EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 76 iViH~AA~v~----f~--------e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++||+||... +. +.++..+++|+.|+..+++++.+. +.-.++|++||...... .+
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~----------~~- 150 (262)
T TIGR03325 82 CLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP----------NG- 150 (262)
T ss_pred EEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC----------CC-
Confidence 9999998632 11 124578899999999999998652 11247888888643211 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~ 205 (1217)
....|+.||+..+.+++.++ +++.+..+.|+.+..+.
T Consensus 151 ---------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 151 ---------------------------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL 191 (262)
T ss_pred ---------------------------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence 01369999999999987765 34778889999887654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00017 Score=89.50 Aligned_cols=152 Identities=13% Similarity=0.014 Sum_probs=102.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----HHHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----FDRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
-++|+.+.-|....++|.+.....+ .+.+. ++....-.++.++.+|++++ +++..+++ .
T Consensus 319 lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 319 VVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDA------DAMEAFAEWVRAEHGV 392 (582)
T ss_pred EEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHhcCC
Confidence 3788888899999999976322110 11111 11111123678999999998 66665554 4
Q ss_pred ccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+||.... . +.++..+++|+.|+.++++++... +.-.++|++||...+....
T Consensus 393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------ 460 (582)
T PRK05855 393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR------------ 460 (582)
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC------------
Confidence 7999999998532 1 234577889999999988876431 1124899999987654211
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||++.|.+.+..+ .|+.++.+.|+.|-.+
T Consensus 461 --------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 461 --------------------------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred --------------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 01369999998887765543 6899999999988654
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0011 Score=73.06 Aligned_cols=194 Identities=12% Similarity=0.035 Sum_probs=127.4
Q ss_pred cccCCCCCCcccHHHHHHHHhc-----ChhHHHhhhcCcccC-CCeEEEEccCCCCCCCCCHHHHHHh-------cCCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFA-----DDAFDRLRKENANFT-ERIVVLTADLQSDGLGLDEKEKKVL-------REDVN 75 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~-----~~vfd~Lr~~~p~~~-~kI~~V~GDl~d~~LGLs~edl~~L-------~~~VD 75 (1217)
-+||+.+.-|+...++|.+..- .+-.++|.+...+.. .++.++..|++|+ ++.+.+ +.++|
T Consensus 10 lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~------~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 10 LITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDR------AAVEAAIEALPEEFGRID 83 (246)
T ss_pred EEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCH------HHHHHHHHHHHHhhCccc
Confidence 4899999999999999998433 233455554433333 5789999999998 664433 34689
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+++|-||...- .+.++.++++|+.|..++.++.... .+--.+|.+||.... ..|+
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~--------~~y~------- 148 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR--------YPYP------- 148 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc--------ccCC-------
Confidence 99999998633 1346689999999999988776421 222389999996531 1122
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
.-+.|+.||+.--.+....+ .++.++.+-|+.|-...-.- |.+. |-.
T Consensus 149 -----------------------~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~---v~~~--g~~ 200 (246)
T COG4221 149 -----------------------GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFST---VRFE--GDD 200 (246)
T ss_pred -----------------------CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceeccc---ccCC--chh
Confidence 12679999998776664433 68889999999885542111 1111 100
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
.-...+. .....+.-+|+|+++..++.++..
T Consensus 201 ~~~~~~y------------~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 201 ERADKVY------------KGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred hhHHHHh------------ccCCCCCHHHHHHHHHHHHhCCCc
Confidence 1111111 123468899999999999887665
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00023 Score=78.58 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=81.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++. .+..+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (247)
T PRK12935 56 HDVYAVQADVSKVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPY 129 (247)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999854 3444333 47999999997432 1455578899999999999998742
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||.++.... + ....|+.||+..|.++.++.
T Consensus 130 ~~~~~~~~iv~~sS~~~~~~~---------~-----------------------------~~~~Y~~sK~a~~~~~~~l~ 171 (247)
T PRK12935 130 ITEAEEGRIISISSIIGQAGG---------F-----------------------------GQTNYSAAKAGMLGFTKSLA 171 (247)
T ss_pred HHHcCCcEEEEEcchhhcCCC---------C-----------------------------CCcchHHHHHHHHHHHHHHH
Confidence 134589999997543210 0 01259999999898887653
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+.+++|.+|.
T Consensus 172 -----~~~~~~~i~v~~v~pg~v~ 190 (247)
T PRK12935 172 -----LELAKTNVTVNAICPGFID 190 (247)
T ss_pred -----HHHHHcCcEEEEEEeCCCc
Confidence 1112457888888887774
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=9.2e-05 Score=81.64 Aligned_cols=151 Identities=14% Similarity=0.058 Sum_probs=99.8
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcC----cccCCCeEEEEccCCCCCCCCCHHHHHHhc-----------CC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN----ANFTERIVVLTADLQSDGLGLDEKEKKVLR-----------ED 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~----p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-----------~~ 73 (1217)
-+||+.+.-|....++|.+.... +.-.-|+.. .....++.++.+|++++ ++++.++ ..
T Consensus 5 lItGasggiG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 5 IVTGHSRGLGAALAEQLLQPGIA-VLGVARSRHPSLAAAAGERLAEVELDLSDA------AAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred EEecCCcchHHHHHHHHHhCCCE-EEEEecCcchhhhhccCCeEEEEEeccCCH------HHHHHHHHHHHHHHhccCCC
Confidence 36888888899999998763222 111011110 11224688999999998 6665522 14
Q ss_pred ccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f~--------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|++||+|+..... +.++..+++|+.|+..+++.+.+. .+..++|++||...+....
T Consensus 78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 145 (243)
T PRK07023 78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA------------ 145 (243)
T ss_pred ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC------------
Confidence 78999999975321 224577889999977776665432 2346899999975432100
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.+|+..|.+++.+. .++.+.+++|+.+-.+
T Consensus 146 --------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 146 --------------------------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred --------------------------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 01369999999999998665 4788999999877443
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00019 Score=79.98 Aligned_cols=122 Identities=12% Similarity=0.118 Sum_probs=79.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-cCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-EDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+++++.||+++.. +++...+ .++|+|||+++...-..+ ....++|+.|+.++++++++. ++++||++||..
T Consensus 62 ~~~~~~~~Dl~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~ 134 (251)
T PLN00141 62 PSLQIVRADVTEGS-----DKLVEAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRKA-GVTRFILVSSIL 134 (251)
T ss_pred CceEEEEeeCCCCH-----HHHHHHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEEcccc
Confidence 36899999999742 2344444 589999999885321111 223567999999999999986 788999999999
Q ss_pred eecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCcee
Q psy13944 628 SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVR 707 (1217)
Q Consensus 628 v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~ 707 (1217)
+|+.... ..+.++ +.. . .....|..+|..+|.++. ..++.+.
T Consensus 135 v~g~~~~---~~~~~~---~~~-------------------~-~~~~~~~~~k~~~e~~l~------------~~gi~~~ 176 (251)
T PLN00141 135 VNGAAMG---QILNPA---YIF-------------------L-NLFGLTLVAKLQAEKYIR------------KSGINYT 176 (251)
T ss_pred ccCCCcc---cccCcc---hhH-------------------H-HHHHHHHHHHHHHHHHHH------------hcCCcEE
Confidence 8875321 000000 000 0 000125567888887772 2368899
Q ss_pred EeccCccc
Q psy13944 708 VCRNHPVG 715 (1217)
Q Consensus 708 i~rp~~v~ 715 (1217)
++||..+.
T Consensus 177 iirpg~~~ 184 (251)
T PLN00141 177 IVRPGGLT 184 (251)
T ss_pred EEECCCcc
Confidence 99998764
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00021 Score=82.70 Aligned_cols=147 Identities=11% Similarity=0.021 Sum_probs=83.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++.+ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 128 (322)
T PRK07453 55 DSYTIIHIDLGDLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE 128 (322)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 46889999999853 3444432 48999999995321 134557889999999999888864
Q ss_pred c----C-CCcEEEEEccceeecCc----ccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHH
Q psy13944 614 M----K-NLDSFIYVSTAYSNCNI----KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWY 684 (1217)
Q Consensus 614 ~----~-~lk~fV~vSTa~v~g~~----~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE 684 (1217)
. + +..++|++||...+... .+..+ +.+..++.......... ....... .......|+.||.+.+
T Consensus 129 ~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~Y~~SK~a~~ 201 (322)
T PRK07453 129 DLKKSPAPDPRLVILGTVTANPKELGGKIPIPA-----PADLGDLSGFEAGFKAP-ISMADGK-KFKPGKAYKDSKLCNM 201 (322)
T ss_pred HHHhCCCCCceEEEEcccccCccccCCccCCCC-----ccchhhhhcchhccccc-ccccCcc-CCCccchhhHhHHHHH
Confidence 2 1 12489999997654321 01111 00000000000000000 0000000 0011247999999988
Q ss_pred HHhhhhcccccccccc--cCCCceeEeccCcc
Q psy13944 685 IICLSFWGCARSREKC--SHDRGVRVCRNHPV 714 (1217)
Q Consensus 685 ~lv~~y~~~a~~~~~~--~~~l~~~i~rp~~v 714 (1217)
.++..+. +++ ..++.+..++|..|
T Consensus 202 ~~~~~la------~~~~~~~gi~v~~v~PG~v 227 (322)
T PRK07453 202 LTMRELH------RRYHESTGITFSSLYPGCV 227 (322)
T ss_pred HHHHHHH------HhhcccCCeEEEEecCCcc
Confidence 8887664 233 24688888899877
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00044 Score=77.21 Aligned_cols=193 Identities=10% Similarity=0.039 Sum_probs=115.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH---------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF---------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf---------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.=+||+.+.-|....++|.+.-...+. ..+.++......++.++.+|++++ +++..+++
T Consensus 10 ~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~i~~~~~~~~~~~ 83 (261)
T PRK08936 10 VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVE------SDVVNLIQTAVKEF 83 (261)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCH------HHHHHHHHHHHHHc
Confidence 448899999999999998873322111 111111111134678899999998 66655443
Q ss_pred -CccEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHH----HhHhcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLK----MAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLe----lAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+|+... +. +.++..+++|+.|+..+++ .+++...-.++|++||...... .|
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~----------~~ 153 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP----------WP 153 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC----------CC
Confidence 5799999999742 21 2244678999988876554 4444222358999999643211 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHh----c-CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREK----M-DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~----~-~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
.-..|+.||++.+.+.+.. . .++.+..++|+.|-.+.....
T Consensus 154 ----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~------ 199 (261)
T PRK08936 154 ----------------------------LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEK------ 199 (261)
T ss_pred ----------------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccc------
Confidence 0136999997766665543 3 689999999998877643210
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+..+. ........ . + ..-+...++++++++.++..
T Consensus 200 ~~~~~-~~~~~~~~-~---~-----~~~~~~~~~va~~~~~l~s~ 234 (261)
T PRK08936 200 FADPK-QRADVESM-I---P-----MGYIGKPEEIAAVAAWLASS 234 (261)
T ss_pred cCCHH-HHHHHHhc-C---C-----CCCCcCHHHHHHHHHHHcCc
Confidence 11111 11111111 1 1 12356678999998877654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00038 Score=78.54 Aligned_cols=153 Identities=14% Similarity=0.150 Sum_probs=102.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-H---HHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-F---DRL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-f---d~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
.-+||+.+.-|....++|.+.....+ . +.+ .++..+...++.++.+|++++ +++..+++ .
T Consensus 9 vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 9 AVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDE------QQVKDFASEIKEQFGR 82 (272)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCH------HHHHHHHHHHHHHcCC
Confidence 44788888889999999987322100 0 111 111112234688999999998 66655443 5
Q ss_pred ccEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f-----~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|++||+||.... + +.++..+++|+.|+..+++.+... .+ .++|++||...+...
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------- 148 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD------------- 148 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC-------------
Confidence 7999999987531 1 124567889999998777765432 22 589999997543210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.....|+.||+..+.+++.++ .++.+..+.|+.|..+.
T Consensus 149 -------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~ 191 (272)
T PRK08589 149 -------------------------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL 191 (272)
T ss_pred -------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCch
Confidence 011369999999999987764 57999999999887653
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00039 Score=76.92 Aligned_cols=155 Identities=16% Similarity=0.118 Sum_probs=99.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-------HHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHh-------c
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-------DRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVL-------R 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-------d~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L-------~ 71 (1217)
.=.||+.+.-|....++|.+..... +. +.+.++.. ....++.++.+|+.+. +++++..+ .
T Consensus 15 vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~----~~~~~~~~~~~~~~~~ 90 (247)
T PRK08945 15 ILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTA----TPQNYQQLADTIEEQF 90 (247)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCC----CHHHHHHHHHHHHHHh
Confidence 3478899999999999988732110 01 11111111 1124677888888642 11333332 2
Q ss_pred CCccEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHhHh---cCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 72 EDVNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEE---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-----~---e~l~~a~~vNV~GT~~LLelAk~---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
..+|+|||+|+.... + +.++..+++|+.|+.++++.+.. ..+..+||++||...... .+
T Consensus 91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------~~ 160 (247)
T PRK08945 91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG----------RA 160 (247)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC----------CC
Confidence 468999999987432 1 23457899999999998887742 135679999999643211 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||+.+|.+++.+. .++++.+++|+.+-.+
T Consensus 161 ----------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 161 ----------------------------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred ----------------------------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 01359999999999887654 4778888888877554
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00021 Score=78.98 Aligned_cols=119 Identities=14% Similarity=0.078 Sum_probs=78.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+..... +.+...+++|+.|+.++++.+
T Consensus 53 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (258)
T PRK12429 53 GKAIGVAMDVTDEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPI 126 (258)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 46889999999864 344433 3689999999964332 233457789999955555544
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +.++||++||....... + ....|+.+|+..|.+++.+
T Consensus 127 ~~~~-~~~~iv~iss~~~~~~~----------~----------------------------~~~~y~~~k~a~~~~~~~l 167 (258)
T PRK12429 127 MKAQ-GGGRIINMASVHGLVGS----------A----------------------------GKAAYVSAKHGLIGLTKVV 167 (258)
T ss_pred HHhc-CCeEEEEEcchhhccCC----------C----------------------------CcchhHHHHHHHHHHHHHH
Confidence 443 57899999997543220 0 0135999999999888776
Q ss_pred cccccccccccCCCceeEeccCccchh
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
.. +....++.+..++|..+-..
T Consensus 168 ~~-----~~~~~~i~v~~~~pg~v~~~ 189 (258)
T PRK12429 168 AL-----EGATHGVTVNAICPGYVDTP 189 (258)
T ss_pred HH-----HhcccCeEEEEEecCCCcch
Confidence 41 11234677778888777543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00035 Score=78.58 Aligned_cols=116 Identities=16% Similarity=0.177 Sum_probs=78.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccch-------hcHHHHHHHHHHHHHHH----HHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKL----LKMA 611 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nL----LelA 611 (1217)
++.++.+|+++++ +++.+++ ++|+|||+|+...+. +.++..+++|+.|+.++ +..+
T Consensus 47 ~~~~~~~Dv~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~ 120 (273)
T PRK06182 47 GVHPLSLDVTDEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHM 120 (273)
T ss_pred CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHH
Confidence 4788999999853 4554443 689999999965321 33457888999995544 4455
Q ss_pred HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 612 EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 612 ~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
++. +..++|++||...... . +....|+.||+..+.++.++.
T Consensus 121 ~~~-~~g~iv~isS~~~~~~----------~----------------------------~~~~~Y~~sKaa~~~~~~~l~ 161 (273)
T PRK06182 121 RAQ-RSGRIINISSMGGKIY----------T----------------------------PLGAWYHATKFALEGFSDALR 161 (273)
T ss_pred Hhc-CCCEEEEEcchhhcCC----------C----------------------------CCccHhHHHHHHHHHHHHHHH
Confidence 554 4568999999653211 0 011259999999999886653
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. +....++.+.+++|..|-
T Consensus 162 ~-----e~~~~gi~v~~v~Pg~v~ 180 (273)
T PRK06182 162 L-----EVAPFGIDVVVIEPGGIK 180 (273)
T ss_pred H-----HhcccCCEEEEEecCCcc
Confidence 1 112457888999998884
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00018 Score=80.02 Aligned_cols=192 Identities=14% Similarity=0.057 Sum_probs=115.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.=+||+.+.-|....+++.+.... -+.+ .+.+..... +..++.+|++++ ++++.+++ .+|
T Consensus 10 vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 10 AVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV--GGLFVPTDVTDE------DAVNALFDTAAETYGSVD 81 (255)
T ss_pred EEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCcEEEeeCCCH------HHHHHHHHHHHHHcCCCC
Confidence 347899889999999999863221 1111 111110111 125788999998 66665554 579
Q ss_pred EEEEcCccCCcc---------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcc-cccccccccccccCCCCC
Q psy13944 76 IVFHVAATVKFD---------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAY-SNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 76 iViH~AA~v~f~---------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~-v~g~~~~I~E~~y~~p~d 142 (1217)
+|||+|+..... +.++..+++|+.|+..+++.+.. + .+..++|++||.. +++..
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~------------- 148 (255)
T PRK06057 82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA------------- 148 (255)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC-------------
Confidence 999999875321 12457889999999887776642 1 2345899998854 22210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHH----Hhc-CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVR----EKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~----~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.....|+.||+..+.+.+ ++. .++.+.++||+.+.++...+. +. .
T Consensus 149 -------------------------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~---~ 198 (255)
T PRK06057 149 -------------------------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL--FA---K 198 (255)
T ss_pred -------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh--cc---C
Confidence 001359999976665554 444 689999999999987643221 10 0
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+........ ..+ ...+..++++++++..++..
T Consensus 199 ~~~~~~~~~~-----~~~-----~~~~~~~~~~a~~~~~l~~~ 231 (255)
T PRK06057 199 DPERAARRLV-----HVP-----MGRFAEPEEIAAAVAFLASD 231 (255)
T ss_pred CHHHHHHHHh-----cCC-----CCCCcCHHHHHHHHHHHhCc
Confidence 1111111110 111 12578899999998766544
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00039 Score=78.48 Aligned_cols=118 Identities=12% Similarity=0.150 Sum_probs=81.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+..... +.+...+++|+.|+.++++.+...
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~ 132 (274)
T PRK07775 59 GEAVAFPLDVTDPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPG 132 (274)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35888999999854 344433 3579999999964321 234466789999999999887531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||..++... | ....|+.||+..|.++.+|.
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~l~~~~~ 174 (274)
T PRK07775 133 MIERRRGDLIFVGSDVALRQR----------P----------------------------HMGAYGAAKAGLEAMVTNLQ 174 (274)
T ss_pred HHhcCCceEEEECChHhcCCC----------C----------------------------CcchHHHHHHHHHHHHHHHH
Confidence 234579999997654321 0 01259999999999998765
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+. ....++.+.+++|.++.
T Consensus 175 ~~-----~~~~gi~v~~v~pG~~~ 193 (274)
T PRK07775 175 ME-----LEGTGVRASIVHPGPTL 193 (274)
T ss_pred HH-----hcccCeEEEEEeCCccc
Confidence 21 12347888899997774
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0003 Score=78.61 Aligned_cols=151 Identities=20% Similarity=0.162 Sum_probs=101.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.-+||+.+.-|....++|.+.... .-.+.+.+ ....++.++.+|++++ ++.+.++ .
T Consensus 9 vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g 79 (263)
T PRK06200 9 ALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQ---RFGDHVLVVEGDVTSY------ADNQRAVDQTVDAFG 79 (263)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCcceEEEccCCCH------HHHHHHHHHHHHhcC
Confidence 347888888888998888874221 11122222 1234688999999997 6665544 3
Q ss_pred CccEEEEcCccCCc-----ccC-------HHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 DVNIVFHVAATVKF-----DEH-------FQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-----~e~-------l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|++||+|+.... +.+ ++..+++|+.|+..+++.+... +.-.++|++||...+....
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 151 (263)
T PRK06200 80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG-------- 151 (263)
T ss_pred CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC--------
Confidence 57999999996432 111 3456789999999998888642 1124799999976532110
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~ 205 (1217)
.-..|+.||+..|.+++..+ +++.+..+.|+.|..+.
T Consensus 152 ------------------------------~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~ 192 (263)
T PRK06200 152 ------------------------------GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL 192 (263)
T ss_pred ------------------------------CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence 01359999999998887765 55888889999886553
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00034 Score=77.12 Aligned_cols=119 Identities=15% Similarity=0.120 Sum_probs=80.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|++++. +++.+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+..
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06123 52 GEALAVAADVADEA------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK 125 (248)
T ss_pred CcEEEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45788999999853 3444433 68999999986431 123346789999999999888764
Q ss_pred cC------CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 614 MK------NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 614 ~~------~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
.- +-.++|++||..+... .+ .....|+.||+..|.++
T Consensus 126 ~~~~~~~~~~g~iv~~sS~~~~~~----------~~---------------------------~~~~~Y~~sKaa~~~~~ 168 (248)
T PRK06123 126 RMSTRHGGRGGAIVNVSSMAARLG----------SP---------------------------GEYIDYAASKGAIDTMT 168 (248)
T ss_pred HHHhcCCCCCeEEEEECchhhcCC----------CC---------------------------CCccchHHHHHHHHHHH
Confidence 20 0136899999643211 00 00014999999999999
Q ss_pred hhhcccccccccccCCCceeEeccCccc
Q psy13944 688 LSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 688 ~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+++. ++-..+++.+.+++|..|-
T Consensus 169 ~~la-----~~~~~~~i~v~~i~pg~v~ 191 (248)
T PRK06123 169 IGLA-----KEVAAEGIRVNAVRPGVIY 191 (248)
T ss_pred HHHH-----HHhcccCeEEEEEecCccc
Confidence 8764 1122457999999999885
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00053 Score=75.31 Aligned_cols=118 Identities=12% Similarity=0.108 Sum_probs=82.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc----h---hcHHHHHHHHHHHHHHHHHHHH-h
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAE-E 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f----~---~~~~~~~~~NV~GT~nLLelA~-~ 613 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... + +.+...+++|+.|+.++++++. .
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (249)
T PRK12827 59 GKALGLAFDVRDFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPP 132 (249)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46889999999864 333332 368999999996541 1 2344678899999999999998 2
Q ss_pred ---cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 ---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
..+..+||++||...+... + ....|+.||+..|.++.++
T Consensus 133 ~~~~~~~~~iv~~sS~~~~~~~---------~-----------------------------~~~~y~~sK~a~~~~~~~l 174 (249)
T PRK12827 133 MIRARRGGRIVNIASVAGVRGN---------R-----------------------------GQVNYAASKAGLIGLTKTL 174 (249)
T ss_pred HHhcCCCeEEEEECCchhcCCC---------C-----------------------------CCchhHHHHHHHHHHHHHH
Confidence 1245789999996554320 0 0125999999999988765
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.. +....++.+.+++|.+|.
T Consensus 175 ~~-----~~~~~~i~~~~i~pg~v~ 194 (249)
T PRK12827 175 AN-----ELAPRGITVNAVAPGAIN 194 (249)
T ss_pred HH-----HhhhhCcEEEEEEECCcC
Confidence 41 112347888899998885
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00029 Score=79.65 Aligned_cols=119 Identities=16% Similarity=0.165 Sum_probs=81.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh--------cCccEEEEcCccccc-------hhcHHHHHHHHHHH----HHHHHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR--------EDVNIVFHVAATVKF-------DEHFQTAFEINCKG----TEKLLKM 610 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~--------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~G----T~nLLel 610 (1217)
+++++.+|+++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.| ++.+++.
T Consensus 48 ~~~~~~~Dl~d~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~ 121 (277)
T PRK05993 48 GLEAFQLDYAEPE------SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPV 121 (277)
T ss_pred CceEEEccCCCHH------HHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence 4778899999853 333332 257999999986432 12345688999999 6667777
Q ss_pred HHhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 611 AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 611 A~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++. +..++|++||.+.+.. .+ ....|+.||+..|.+++++
T Consensus 122 ~~~~-~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~l 162 (277)
T PRK05993 122 MRKQ-GQGRIVQCSSILGLVP----------MK----------------------------YRGAYNASKFAIEGLSLTL 162 (277)
T ss_pred Hhhc-CCCEEEEECChhhcCC----------CC----------------------------ccchHHHHHHHHHHHHHHH
Confidence 7665 5678999999754321 00 1135999999999999775
Q ss_pred cccccccccccCCCceeEeccCccchhh
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
. .+-...++.+.+++|.+|.-.+
T Consensus 163 ~-----~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 163 R-----MELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred H-----HHhhhhCCEEEEEecCCccCch
Confidence 3 1112457888999998886443
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00022 Score=78.41 Aligned_cols=118 Identities=16% Similarity=0.070 Sum_probs=81.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+|+..... +.++..+++|+.|+.++++.+...
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 128 (241)
T PRK07454 55 VKAAAYSIDLSNPE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPG 128 (241)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 46889999999864 333333 3589999999864321 234567889999999988776431
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||..+++.. .....|+.||+..+.+++++.
T Consensus 129 ~~~~~~~~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~~~~~~~~~~a 170 (241)
T PRK07454 129 MRARGGGLIINVSSIAARNAF--------------------------------------PQWGAYCVSKAALAAFTKCLA 170 (241)
T ss_pred HHhcCCcEEEEEccHHhCcCC--------------------------------------CCccHHHHHHHHHHHHHHHHH
Confidence 245689999998654321 011359999999999886643
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+ +....++++..++|-.+.
T Consensus 171 ---~--e~~~~gi~v~~i~pg~i~ 189 (241)
T PRK07454 171 ---E--EERSHGIRVCTITLGAVN 189 (241)
T ss_pred ---H--HhhhhCCEEEEEecCccc
Confidence 1 122457888888998875
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00025 Score=77.94 Aligned_cols=117 Identities=15% Similarity=0.104 Sum_probs=77.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
..+.++.+|+++.+ .+..+.+ .+|+|||+||... + .+.++..+++|+.|+.++++.+...
T Consensus 57 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 57 GSAAALQADLLDPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 35889999999853 3444433 5799999999532 1 2345578889999999999999742
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
+.-..++++|+.. + ....+ .-+.|+.||+.+|.+++++.
T Consensus 131 ~~~~~~~~~~~~~~~--~-------~~~~~-----------------------------~~~~Y~~sK~~~~~~~~~l~- 171 (249)
T PRK09135 131 LRKQRGAIVNITDIH--A-------ERPLK-----------------------------GYPVYCAAKAALEMLTRSLA- 171 (249)
T ss_pred HhhCCeEEEEEeChh--h-------cCCCC-----------------------------CchhHHHHHHHHHHHHHHHH-
Confidence 1112344444321 1 10001 11359999999999998764
Q ss_pred cccccccccCCCceeEeccCccc
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++++.++.+.+++|.+|-
T Consensus 172 -----~~~~~~i~~~~v~pg~~~ 189 (249)
T PRK09135 172 -----LELAPEVRVNAVAPGAIL 189 (249)
T ss_pred -----HHHCCCCeEEEEEecccc
Confidence 344456888889997774
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00033 Score=77.66 Aligned_cols=118 Identities=19% Similarity=0.127 Sum_probs=80.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH----HhcCC
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA----EEMKN 616 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA----~~~~~ 616 (1217)
.++.++.+|++++. ++..+.. ++|+|||+|+.... .+.++..+++|+.|+.++.+.+ ++. +
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~ 123 (257)
T PRK09291 51 LALRVEKLDLTDAI------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-G 123 (257)
T ss_pred CcceEEEeeCCCHH------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-C
Confidence 35889999999863 4555554 79999999995421 2234467889999988776544 333 4
Q ss_pred CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccc
Q psy13944 617 LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARS 696 (1217)
Q Consensus 617 lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~ 696 (1217)
..+||++||...... .| ....|+.||+..|.++.++..
T Consensus 124 ~~~iv~~SS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l~~---- 161 (257)
T PRK09291 124 KGKVVFTSSMAGLIT----------GP----------------------------FTGAYCASKHALEAIAEAMHA---- 161 (257)
T ss_pred CceEEEEcChhhccC----------CC----------------------------CcchhHHHHHHHHHHHHHHHH----
Confidence 579999999643211 00 113599999999999866531
Q ss_pred cccccCCCceeEeccCccch
Q psy13944 697 REKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 697 ~~~~~~~l~~~i~rp~~v~e 716 (1217)
+-...++.+..++|.++..
T Consensus 162 -~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 162 -ELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred -HHHhcCcEEEEEecCcccc
Confidence 1123578888899987753
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00041 Score=77.73 Aligned_cols=120 Identities=14% Similarity=0.084 Sum_probs=83.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.+++++.+|++|++ +++.+++ .+|+|||+||.... .+..+..+++|+.|+.++++.+..
T Consensus 45 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~ 118 (270)
T PRK06179 45 PGVELLELDVTDDA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPH 118 (270)
T ss_pred CCCeeEEeecCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35789999999864 4555543 47999999996432 234457889999999999988632
Q ss_pred --cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 --MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 --~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
..+..++|++||...+.. .| ....|+.||+..|.++.++.
T Consensus 119 ~~~~~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l~ 160 (270)
T PRK06179 119 MRAQGSGRIINISSVLGFLP----------AP----------------------------YMALYAASKHAVEGYSESLD 160 (270)
T ss_pred HHhcCCceEEEECCccccCC----------CC----------------------------CccHHHHHHHHHHHHHHHHH
Confidence 125679999999755322 11 11259999999999987653
Q ss_pred ccccccccccCCCceeEeccCccchh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
. +--..++.+..++|..+...
T Consensus 161 ~-----el~~~gi~v~~v~pg~~~t~ 181 (270)
T PRK06179 161 H-----EVRQFGIRVSLVEPAYTKTN 181 (270)
T ss_pred H-----HHhhhCcEEEEEeCCCcccc
Confidence 1 11135788888999887543
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00038 Score=85.78 Aligned_cols=153 Identities=13% Similarity=0.152 Sum_probs=104.6
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNI 76 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDi 76 (1217)
-+||+.+.-|....++|.+-.... +. +.+.+.......++..+.+|++++ ++++.+++ .+|+
T Consensus 273 lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 273 AITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDE------AAVESAFAQIQARWGRLDV 346 (520)
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCH------HHHHHHHHHHHHHcCCCCE
Confidence 378888888999999998733221 11 111111111234677889999998 66665543 4799
Q ss_pred EEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 77 VFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 77 ViH~AA~v~f-----~---e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
+||+||.... + +.++..+++|+.|+.++++.+.. +.+-.++|++||....... |
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------- 409 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL----------P------- 409 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC----------C-------
Confidence 9999997521 1 23457899999999999998765 2333589999997653210 0
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.-..|+.||+..+.+++..+ .++.+..+.|+.|..+.
T Consensus 410 ---------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 410 ---------------------PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA 451 (520)
T ss_pred ---------------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence 01369999999998887654 57999999999887763
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00055 Score=78.45 Aligned_cols=118 Identities=19% Similarity=0.153 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|++++. +++.++ ..+|+|||+|+... + .+.++..+++|+.|+.++++.+..
T Consensus 106 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 179 (300)
T PRK06128 106 RKAVALPGDLKDEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP 179 (300)
T ss_pred CeEEEEecCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 35788999999853 343333 36899999999532 1 234557899999999999999975
Q ss_pred c-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 614 M-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 614 ~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
. ..-.++|++||..++... + ....|+.||++.|.+++++.+
T Consensus 180 ~~~~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~ 221 (300)
T PRK06128 180 HLPPGASIINTGSIQSYQPS----------P----------------------------TLLDYASTKAAIVAFTKALAK 221 (300)
T ss_pred hcCcCCEEEEECCccccCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHH
Confidence 3 223589999998765321 0 012499999999999987641
Q ss_pred cccccccccCCCceeEeccCccc
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+-...++.+..++|.+|.
T Consensus 222 -----el~~~gI~v~~v~PG~i~ 239 (300)
T PRK06128 222 -----QVAEKGIRVNAVAPGPVW 239 (300)
T ss_pred -----HhhhcCcEEEEEEECcCc
Confidence 122457888888998875
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00059 Score=75.99 Aligned_cols=119 Identities=18% Similarity=0.130 Sum_probs=81.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.+++++.+|+++++ +++.++ ..+|+|||+|+..... +.++..+++|+.|+..+++.+...
T Consensus 67 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 140 (256)
T PRK12748 67 VRCEHMEIDLSQPY------APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQ 140 (256)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999854 333222 3579999999864321 234467889999999999888632
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
....++|++||..+++.. + ....|+.||++.|.+++++.
T Consensus 141 ~~~~~~~~iv~~ss~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 182 (256)
T PRK12748 141 YDGKAGGRIINLTSGQSLGPM----------P----------------------------DELAYAATKGAIEAFTKSLA 182 (256)
T ss_pred hhhcCCeEEEEECCccccCCC----------C----------------------------CchHHHHHHHHHHHHHHHHH
Confidence 123589999997654321 0 01259999999999987653
Q ss_pred ccccccccccCCCceeEeccCccch
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+ +....++.+..++|-++..
T Consensus 183 ~-----e~~~~~i~v~~i~Pg~~~t 202 (256)
T PRK12748 183 P-----ELAEKGITVNAVNPGPTDT 202 (256)
T ss_pred H-----HHHHhCeEEEEEEeCcccC
Confidence 1 1123468888888987753
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00039 Score=79.67 Aligned_cols=119 Identities=16% Similarity=0.060 Sum_probs=80.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc---------hhcHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f---------~~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.++.++.+|++|++ ++..+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 89 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 162 (293)
T PRK05866 89 GDAMAVPCDLSDLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLA 162 (293)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999854 4444443 78999999986421 12344678899999988887654
Q ss_pred ----hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 613 ----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 613 ----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
+. +..++|++||..+.... .| ....|+.||+..+.++.
T Consensus 163 ~~~~~~-~~g~iv~isS~~~~~~~---------~p----------------------------~~~~Y~asKaal~~l~~ 204 (293)
T PRK05866 163 PGMLER-GDGHIINVATWGVLSEA---------SP----------------------------LFSVYNASKAALSAVSR 204 (293)
T ss_pred HHHHhc-CCcEEEEECChhhcCCC---------CC----------------------------CcchHHHHHHHHHHHHH
Confidence 32 45689999996543210 00 11369999999999987
Q ss_pred hhcccccccccccCCCceeEeccCccch
Q psy13944 689 SFWGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 689 ~y~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
++.. +-...++.+..++|.+|..
T Consensus 205 ~la~-----e~~~~gI~v~~v~pg~v~T 227 (293)
T PRK05866 205 VIET-----EWGDRGVHSTTLYYPLVAT 227 (293)
T ss_pred HHHH-----HhcccCcEEEEEEcCcccC
Confidence 7531 1123467777778877753
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00056 Score=76.92 Aligned_cols=117 Identities=16% Similarity=0.124 Sum_probs=81.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+.+
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (276)
T PRK05875 58 GAVRYEPADVTDED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR 131 (276)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999854 4444433 68999999985421 122446788999999999987754
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+-.+|+++||..+.... +..+.|+.||+..|.++.++
T Consensus 132 ~~~~~~~g~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~~ 173 (276)
T PRK05875 132 ELVRGGGGSFVGISSIAASNTH--------------------------------------RWFGAYGVTKSAVDHLMKLA 173 (276)
T ss_pred HHHhcCCcEEEEEechhhcCCC--------------------------------------CCCcchHHHHHHHHHHHHHH
Confidence 2 123489999997653210 11246999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ ..++.+.+++|-++-
T Consensus 174 ~------~~~~~~~i~v~~i~Pg~v~ 193 (276)
T PRK05875 174 A------DELGPSWVRVNSIRPGLIR 193 (276)
T ss_pred H------HHhcccCeEEEEEecCccC
Confidence 4 222 356778888887774
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00047 Score=77.74 Aligned_cols=118 Identities=15% Similarity=0.116 Sum_probs=81.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHH---HH---hcCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKE---VL---REDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE--- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~---~L---~~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~--- 612 (1217)
.+++++.+|+++++ +++ .+ ...+|+|||+|+.... .+.++..+++|+.|+.++++.+.
T Consensus 54 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 127 (280)
T PRK06914 54 QNIKVQQLDVTDQN------SIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYM 127 (280)
T ss_pred CceeEEecCCCCHH------HHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46899999999864 222 22 2457999999986431 13344678899999999988863
Q ss_pred -hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 613 -EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 613 -~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+. +..+||++||..+.... + ....|+.||+..|.+++++.
T Consensus 128 ~~~-~~~~iv~vsS~~~~~~~----------~----------------------------~~~~Y~~sK~~~~~~~~~l~ 168 (280)
T PRK06914 128 RKQ-KSGKIINISSISGRVGF----------P----------------------------GLSPYVSSKYALEGFSESLR 168 (280)
T ss_pred Hhc-CCCEEEEECcccccCCC----------C----------------------------CCchhHHhHHHHHHHHHHHH
Confidence 33 46789999986443210 0 11259999999999997753
Q ss_pred ccccccccccCCCceeEeccCccch
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
. +....++.+.+++|.++-.
T Consensus 169 ~-----~~~~~~i~v~~v~pg~~~t 188 (280)
T PRK06914 169 L-----ELKPFGIDVALIEPGSYNT 188 (280)
T ss_pred H-----HhhhhCCEEEEEecCCccc
Confidence 1 1124578899999987753
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00048 Score=77.71 Aligned_cols=117 Identities=19% Similarity=0.177 Sum_probs=81.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc---------hhcHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f---------~~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 66 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 139 (280)
T PLN02253 66 PNVCFFHCDVTVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAA 139 (280)
T ss_pred CceEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 46889999999854 4444433 68999999996531 13455789999999999998876
Q ss_pred hc---CCCcEEEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 613 EM---KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 613 ~~---~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
.. .+-.++|++||... ++. ..+..|+.||+..|.+++
T Consensus 140 ~~~~~~~~g~ii~isS~~~~~~~---------------------------------------~~~~~Y~~sK~a~~~~~~ 180 (280)
T PLN02253 140 RIMIPLKKGSIVSLCSVASAIGG---------------------------------------LGPHAYTGSKHAVLGLTR 180 (280)
T ss_pred HHHHhcCCceEEEecChhhcccC---------------------------------------CCCcccHHHHHHHHHHHH
Confidence 42 12347888887543 221 012359999999999997
Q ss_pred hhcccccccccc-cCCCceeEeccCccch
Q psy13944 689 SFWGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 689 ~y~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
++. ..+ ..++.+..++|-+|..
T Consensus 181 ~la------~e~~~~gi~v~~i~pg~v~t 203 (280)
T PLN02253 181 SVA------AELGKHGIRVNCVSPYAVPT 203 (280)
T ss_pred HHH------HHhhhcCeEEEEEeeCcccc
Confidence 764 222 3467778888887753
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00044 Score=76.35 Aligned_cols=119 Identities=15% Similarity=0.086 Sum_probs=81.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (250)
T PRK08063 54 RKALAVKANVGDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKL 127 (250)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999864 4444433 57999999986432 1223356789999999999988752
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+.++||++||..+.... + ....|+.||++.|.+++++.
T Consensus 128 ~~~~~~g~iv~~sS~~~~~~~----------~----------------------------~~~~y~~sK~a~~~~~~~~~ 169 (250)
T PRK08063 128 MEKVGGGKIISLSSLGSIRYL----------E----------------------------NYTTVGVSKAALEALTRYLA 169 (250)
T ss_pred HHhcCCeEEEEEcchhhccCC----------C----------------------------CccHHHHHHHHHHHHHHHHH
Confidence 134589999996443210 0 01259999999999998764
Q ss_pred ccccccccccCCCceeEeccCccch
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+ +-...++.+..++|.+|-.
T Consensus 170 ~-----~~~~~~i~v~~i~pg~v~t 189 (250)
T PRK08063 170 V-----ELAPKGIAVNAVSGGAVDT 189 (250)
T ss_pred H-----HHhHhCeEEEeEecCcccC
Confidence 1 1123578888888888853
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0014 Score=71.90 Aligned_cols=186 Identities=12% Similarity=0.145 Sum_probs=116.3
Q ss_pred ccCCCCCCcccHHHHHHHHhc-ChhHHHhhhcCccc-CCCeEEEEccCCCCCCCCCHHHHHH---hcCCccEEEEcCccC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFA-DDAFDRLRKENANF-TERIVVLTADLQSDGLGLDEKEKKV---LREDVNIVFHVAATV 84 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~-~~vfd~Lr~~~p~~-~~kI~~V~GDl~d~~LGLs~edl~~---L~~~VDiViH~AA~v 84 (1217)
+||+.+.-|....++|.+... ..+....+...+.. ..++.++.+|++++ ++.+. .+.++|+|||+||..
T Consensus 5 ItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~Dls~~------~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 5 IVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWHALDVTDE------AEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred EECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccccCceEEEEecCCCH------HHHHHHHHhcCCCCEEEECCccc
Confidence 688999999999999987532 22211112222222 35788999999998 54443 346789999999986
Q ss_pred Ccc-------------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChHHHHH
Q psy13944 85 KFD-------------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 85 ~f~-------------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
... +.+...+.+|+.|+..+.+.+.. + .+..+++++||... .. .+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~---~~~~~----------- 142 (235)
T PRK09009 79 HTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SI---SDNRL----------- 142 (235)
T ss_pred cccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--cc---ccCCC-----------
Confidence 321 11346788999999988887754 2 12357888887321 10 00000
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
..+ ..|+.+|+..+.+++..+ .++.+..+.|+.+-.+...+.
T Consensus 143 ------------------~~~-~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~------------ 191 (235)
T PRK09009 143 ------------------GGW-YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF------------ 191 (235)
T ss_pred ------------------CCc-chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch------------
Confidence 011 269999999999887654 256677788887765532110
Q ss_pred HHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 222 MYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 222 li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
... .....++..++++++++.++....
T Consensus 192 -----~~~---------~~~~~~~~~~~~a~~~~~l~~~~~ 218 (235)
T PRK09009 192 -----QQN---------VPKGKLFTPEYVAQCLLGIIANAT 218 (235)
T ss_pred -----hhc---------cccCCCCCHHHHHHHHHHHHHcCC
Confidence 000 011235788999999998887643
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00067 Score=74.55 Aligned_cols=119 Identities=17% Similarity=0.195 Sum_probs=82.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... .+.+...+++|+.|+.++++.+...
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (239)
T PRK07666 56 VKVVIATADVSDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPS 129 (239)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999854 344443 368999999986432 1334567899999999999888631
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+.+++|++||...+... .....|+.||++.+.+++++.
T Consensus 130 ~~~~~~~~iv~~ss~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~~a 171 (239)
T PRK07666 130 MIERQSGDIINISSTAGQKGA--------------------------------------AVTSAYSASKFGVLGLTESLM 171 (239)
T ss_pred HHhCCCcEEEEEcchhhccCC--------------------------------------CCCcchHHHHHHHHHHHHHHH
Confidence 245689999997543220 011359999999898887654
Q ss_pred ccccccccccCCCceeEeccCccch
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+ +....++.+..++|..|..
T Consensus 172 ~-----e~~~~gi~v~~v~pg~v~t 191 (239)
T PRK07666 172 Q-----EVRKHNIRVTALTPSTVAT 191 (239)
T ss_pred H-----HhhccCcEEEEEecCcccC
Confidence 1 1123578888999988753
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00061 Score=78.19 Aligned_cols=73 Identities=18% Similarity=0.187 Sum_probs=52.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-----hhcHHHHHHHHHHH----HHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-----DEHFQTAFEINCKG----TEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-----~~~~~~~~~~NV~G----T~nLLelA~ 612 (1217)
.++.++.+|+++.. +++.++ ..+|+|||+||.... .+.++..+++|+.| |..+++.++
T Consensus 67 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~ 140 (306)
T PRK06197 67 ADVTLQELDLTSLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLL 140 (306)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHh
Confidence 46889999999854 344433 258999999996432 13345678899999 666777776
Q ss_pred hcCCCcEEEEEcccee
Q psy13944 613 EMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 613 ~~~~lk~fV~vSTa~v 628 (1217)
+. +..++|++||...
T Consensus 141 ~~-~~~~iV~vSS~~~ 155 (306)
T PRK06197 141 PV-PGSRVVTVSSGGH 155 (306)
T ss_pred hC-CCCEEEEECCHHH
Confidence 64 3469999999753
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00082 Score=77.58 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=79.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-----hhcHHHHHHHHHHHHHHHHHHH----Hh
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-----DEHFQTAFEINCKGTEKLLKMA----EE 613 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-----~~~~~~~~~~NV~GT~nLLelA----~~ 613 (1217)
++.++.+|+++.. +++.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+ ++
T Consensus 72 ~v~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~ 145 (315)
T PRK06196 72 GVEVVMLDLADLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA 145 (315)
T ss_pred hCeEEEccCCCHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3788999999853 344433 368999999996421 2345677899999976666544 33
Q ss_pred cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 614 MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 614 ~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
. +..++|++||..........++..+..+. .....|+.||++.+.+++.+.+
T Consensus 146 ~-~~~~iV~vSS~~~~~~~~~~~~~~~~~~~--------------------------~~~~~Y~~SK~a~~~~~~~la~- 197 (315)
T PRK06196 146 G-AGARVVALSSAGHRRSPIRWDDPHFTRGY--------------------------DKWLAYGQSKTANALFAVHLDK- 197 (315)
T ss_pred c-CCCeEEEECCHHhccCCCCccccCccCCC--------------------------ChHHHHHHHHHHHHHHHHHHHH-
Confidence 3 34689999996432210000000000000 0113699999999999876541
Q ss_pred ccccccccCCCceeEeccCccc
Q psy13944 694 ARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+--..++.+..++|.+|.
T Consensus 198 ----~~~~~gi~v~~v~PG~v~ 215 (315)
T PRK06196 198 ----LGKDQGVRAFSVHPGGIL 215 (315)
T ss_pred ----HhcCCCcEEEEeeCCccc
Confidence 112357888889998885
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00052 Score=75.92 Aligned_cols=122 Identities=15% Similarity=0.077 Sum_probs=80.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHH-------hcCccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVL-------REDVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L-------~~~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++.+ .+++..+ ...+|+|||+|+.... .+.++..+++|+.|+.++++.+..
T Consensus 62 ~~~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~ 137 (247)
T PRK08945 62 PQPAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLP 137 (247)
T ss_pred CCceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence 35778888987432 2223222 2368999999986432 234557889999999999887742
Q ss_pred ---cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 ---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
..+..+||++||...... . ..-..|+.||+.+|.++..+
T Consensus 138 ~l~~~~~~~iv~~ss~~~~~~----------~----------------------------~~~~~Y~~sK~a~~~~~~~~ 179 (247)
T PRK08945 138 LLLKSPAASLVFTSSSVGRQG----------R----------------------------ANWGAYAVSKFATEGMMQVL 179 (247)
T ss_pred HHHhCCCCEEEEEccHhhcCC----------C----------------------------CCCcccHHHHHHHHHHHHHH
Confidence 124678999999643211 0 01125999999999999887
Q ss_pred cccccccccccCCCceeEeccCccchh
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
.+. ....++.+..++|-++...
T Consensus 180 ~~~-----~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 180 ADE-----YQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred HHH-----hcccCEEEEEEecCCccCc
Confidence 522 2235677788888887644
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00055 Score=77.52 Aligned_cols=176 Identities=15% Similarity=0.119 Sum_probs=100.3
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhH------HHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------CCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAF------DRL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------EDV 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vf------d~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------~~V 74 (1217)
.||+ +.-|....++|.+ ...+. +.+ .++....-.++.++.+|++++ ++++.++ ..+
T Consensus 7 ItGa-~gIG~~la~~l~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~------~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 7 VIGA-GGIGQAIARRVGA--GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSR------ESVKALAATAQTLGPV 77 (275)
T ss_pred EECC-ChHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCH------HHHHHHHHHHHhcCCC
Confidence 5666 4677788887742 11111 111 111111123688899999998 6666554 358
Q ss_pred cEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcC
Q psy13944 75 NIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153 (1217)
Q Consensus 75 DiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l 153 (1217)
|+|||+||.....+.++..+++|+.|+.++++.+... ..-.+.|++||...........+.. ......
T Consensus 78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~-----------~~~~~~ 146 (275)
T PRK06940 78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQE-----------RALATT 146 (275)
T ss_pred CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhh-----------cccccc
Confidence 9999999976555667889999999999999988642 1113567777754322110000000 000001
Q ss_pred Ccccccccc---cccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 154 SHTELTVLN---DILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 154 ~d~~~~~~t---p~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
+.+.+.... +.........|+.||+.-+.+.+..+ .++.+..+.|+.|-.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~ 206 (275)
T PRK06940 147 PTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL 206 (275)
T ss_pred ccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence 111100000 00000112469999999888776543 57889999999886653
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00027 Score=76.16 Aligned_cols=72 Identities=19% Similarity=0.232 Sum_probs=54.9
Q ss_pred HHHHHHhc--CccEEEEcCcccc--c-hhcH-HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc--cccccc
Q psy13944 568 KAKEVLRE--DVNIVFHVAATVK--F-DEHF-QTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKF 639 (1217)
Q Consensus 568 ~~~~~L~~--~vdvVfH~AA~v~--f-~~~~-~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~--~I~E~~ 639 (1217)
++.+.+.+ ....|||+||.|+ | +..+ -+++..|+.---|+|..|-+. +++++|++-|...+.+.. ||+|..
T Consensus 45 a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~yPIdEtm 123 (315)
T KOG1431|consen 45 ADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTSYPIDETM 123 (315)
T ss_pred HHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCCCCCCHHH
Confidence 46667765 4689999999875 1 2222 268888999999999999997 889999988877787754 788875
Q ss_pred c
Q psy13944 640 Y 640 (1217)
Q Consensus 640 y 640 (1217)
.
T Consensus 124 v 124 (315)
T KOG1431|consen 124 V 124 (315)
T ss_pred h
Confidence 3
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00052 Score=77.63 Aligned_cols=99 Identities=12% Similarity=0.155 Sum_probs=69.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc----h---hcHHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAE-- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f----~---~~~~~~~~~NV~GT~nLLelA~-- 612 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... . +.++..+++|+.|+.++++++.
T Consensus 55 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 128 (287)
T PRK06194 55 AEVLGVRTDVSDAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPL 128 (287)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 36888999999853 4555543 47999999997542 1 3344678899999999777643
Q ss_pred --hcCC-----CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHH
Q psy13944 613 --EMKN-----LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYI 685 (1217)
Q Consensus 613 --~~~~-----lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~ 685 (1217)
+... ..++|++||..++... | ....|+.||+..|.
T Consensus 129 ~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~ 170 (287)
T PRK06194 129 MLAAAEKDPAYEGHIVNTASMAGLLAP----------P----------------------------AMGIYNVSKHAVVS 170 (287)
T ss_pred HHhcCCCCCCCCeEEEEeCChhhccCC----------C----------------------------CCcchHHHHHHHHH
Confidence 2211 1489999997665321 0 11359999999999
Q ss_pred Hhhhhc
Q psy13944 686 ICLSFW 691 (1217)
Q Consensus 686 lv~~y~ 691 (1217)
++++|.
T Consensus 171 ~~~~l~ 176 (287)
T PRK06194 171 LTETLY 176 (287)
T ss_pred HHHHHH
Confidence 998865
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00048 Score=76.66 Aligned_cols=118 Identities=15% Similarity=0.174 Sum_probs=81.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
++.++.+|+++++ +++.++ ..+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 53 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 126 (257)
T PRK07067 53 AAIAVSLDVTRQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHM 126 (257)
T ss_pred ceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 5888999999864 344433 358999999996532 2345578899999999999998642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
..-.+||++||...... .+ ....|+.||+..|.+++++.
T Consensus 127 ~~~~~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la 168 (257)
T PRK07067 127 VEQGRGGKIINMASQAGRRG----------EA----------------------------LVSHYCATKAAVISYTQSAA 168 (257)
T ss_pred HhcCCCcEEEEeCCHHhCCC----------CC----------------------------CCchhhhhHHHHHHHHHHHH
Confidence 11247999999642211 00 01259999999999997754
Q ss_pred ccccccccccCCCceeEeccCccch
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+ +-...++.+..++|..|..
T Consensus 169 ~-----e~~~~gi~v~~i~pg~v~t 188 (257)
T PRK07067 169 L-----ALIRHGINVNAIAPGVVDT 188 (257)
T ss_pred H-----HhcccCeEEEEEeeCcccc
Confidence 1 1224578888899988854
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00065 Score=75.28 Aligned_cols=127 Identities=11% Similarity=0.109 Sum_probs=79.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc------c----hhcHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK------F----DEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~------f----~~~~~~~~~~NV~GT~nLLelA 611 (1217)
..+.++.+|+++++ ++..+++ .+|+|||+|+... + .+.+...+++|+.|+..+++.+
T Consensus 55 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 128 (256)
T PRK09186 55 KKLSLVELDITDQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQF 128 (256)
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHH
Confidence 35778899999864 4444443 3899999997431 1 1234567888998888777666
Q ss_pred Hhc---CCCcEEEEEccceeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 612 EEM---KNLDSFIYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 612 ~~~---~~lk~fV~vSTa~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
... .+..+||++||.+...... .+.|.. ....+..|+.||+..|.++
T Consensus 129 ~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~-----------------------------~~~~~~~Y~~sK~a~~~l~ 179 (256)
T PRK09186 129 AKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT-----------------------------SMTSPVEYAAIKAGIIHLT 179 (256)
T ss_pred HHHHHhcCCceEEEEechhhhccccchhcccc-----------------------------ccCCcchhHHHHHHHHHHH
Confidence 532 2456999999976543211 111110 0011235999999999999
Q ss_pred hhhcccccccccccCCCceeEeccCccc
Q psy13944 688 LSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 688 ~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+++. ++-...++.+..++|..+-
T Consensus 180 ~~la-----~e~~~~~i~v~~i~Pg~~~ 202 (256)
T PRK09186 180 KYLA-----KYFKDSNIRVNCVSPGGIL 202 (256)
T ss_pred HHHH-----HHhCcCCeEEEEEeccccc
Confidence 7643 1222456777788887663
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00051 Score=76.96 Aligned_cols=117 Identities=18% Similarity=0.075 Sum_probs=79.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+|+.... .+.+...+++|+.|+.++++.+...
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (263)
T PRK07814 59 RRAHVVAADLAHPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPL 132 (263)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 46889999999854 343333 368999999985432 1334578899999999999999741
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+..+||++||...... .+ ....|+.||+..|.++.++
T Consensus 133 ~~~~~~~g~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~~ 174 (263)
T PRK07814 133 MLEHSGGGSVINISSTMGRLA----------GR----------------------------GFAAYGTAKAALAHYTRLA 174 (263)
T ss_pred HHhhcCCeEEEEEccccccCC----------CC----------------------------CCchhHHHHHHHHHHHHHH
Confidence 23468999999643211 00 1125999999999999776
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. .+++..+.+..+.|.+|-
T Consensus 175 ~------~e~~~~i~v~~i~Pg~v~ 193 (263)
T PRK07814 175 A------LDLCPRIRVNAIAPGSIL 193 (263)
T ss_pred H------HHHCCCceEEEEEeCCCc
Confidence 4 334445666667776664
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0008 Score=74.27 Aligned_cols=120 Identities=12% Similarity=0.011 Sum_probs=83.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++. ++..++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (252)
T PRK06077 56 GEGIGVLADVSTRE------GCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKE 129 (252)
T ss_pred CeeEEEEeccCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHH
Confidence 35778899999864 333332 368999999995322 1123467899999999999988853
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
+.-.+||++||..++... .....|+.||+..|.++.++.
T Consensus 130 ~~~~~~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sK~~~~~~~~~l~-- 169 (252)
T PRK06077 130 MREGGAIVNIASVAGIRPA--------------------------------------YGLSIYGAMKAAVINLTKYLA-- 169 (252)
T ss_pred hhcCcEEEEEcchhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHH--
Confidence 223479999997654320 011359999999999998764
Q ss_pred ccccccccCCCceeEeccCccchhh
Q psy13944 694 ARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
++++.++.+.+++|..+...+
T Consensus 170 ----~~~~~~i~v~~v~Pg~i~t~~ 190 (252)
T PRK06077 170 ----LELAPKIRVNAIAPGFVKTKL 190 (252)
T ss_pred ----HHHhcCCEEEEEeeCCccChH
Confidence 445557788888998885443
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00043 Score=75.78 Aligned_cols=186 Identities=14% Similarity=0.118 Sum_probs=116.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.-++|+.+.-|..+.++|.+..... + .+.+.+... ...+++++.+|++++ +++..++ .
T Consensus 8 vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 8 VAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLS-KYGNIHYVVGDVSST------ESARNVIEKAAKVLN 80 (238)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCeEEEECCCCCH------HHHHHHHHHHHHHhC
Confidence 4488999999999999987632210 0 111111111 123688999999998 5555443 3
Q ss_pred CccEEEEcCccCCcc-----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 73 DVNIVFHVAATVKFD-----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
.+|.|+|+|+..... +.++..+++|+.+...+++.+.++ ..-.+||++||...... +.+
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------~~~------ 145 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK---------ASP------ 145 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc---------CCC------
Confidence 469999999854211 224467889999998888887653 12247999988643110 000
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
....|+.||+..+.+++... ++++++++||+.++++.. |...|
T Consensus 146 ----------------------~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~-~~~~~--------- 193 (238)
T PRK05786 146 ----------------------DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE-PERNW--------- 193 (238)
T ss_pred ----------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC-chhhh---------
Confidence 01359999999887776544 589999999999998642 10000
Q ss_pred HHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 222 MYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 222 li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. . .. .....+++-++++++++.++..
T Consensus 194 --~----~-~~------~~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 194 --K----K-LR------KLGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred --h----h-hc------cccCCCCCHHHHHHHHHHHhcc
Confidence 0 0 00 0011367889999998887754
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00048 Score=75.37 Aligned_cols=121 Identities=14% Similarity=0.092 Sum_probs=82.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+|+...+ .+.+...+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (237)
T PRK07326 54 GNVLGLAADVRDEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA 127 (237)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 46889999999854 333333 368999999986532 2234467889999999999888642
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||....... .....|+.||+..+.+++.+.+
T Consensus 128 ~~~~~~~iv~~ss~~~~~~~--------------------------------------~~~~~y~~sk~a~~~~~~~~~~ 169 (237)
T PRK07326 128 LKRGGGYIINISSLAGTNFF--------------------------------------AGGAAYNASKFGLVGFSEAAML 169 (237)
T ss_pred HHHCCeEEEEECChhhccCC--------------------------------------CCCchHHHHHHHHHHHHHHHHH
Confidence 234679999987543210 0012499999998888876531
Q ss_pred cccccccccCCCceeEeccCccchhh
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
+....++++..++|..+....
T Consensus 170 -----~~~~~gi~v~~v~pg~~~t~~ 190 (237)
T PRK07326 170 -----DLRQYGIKVSTIMPGSVATHF 190 (237)
T ss_pred -----HhcccCcEEEEEeeccccCcc
Confidence 112357889999998886543
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00083 Score=75.15 Aligned_cols=118 Identities=11% Similarity=0.087 Sum_probs=81.8
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
++.++.+|+++++ +++.++ ..+|+|||+||...+ .+.++..+++|+.|+..+++.+...
T Consensus 45 ~~~~~~~D~~~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 118 (258)
T PRK06398 45 DVDYFKVDVSNKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYM 118 (258)
T ss_pred ceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5788999999864 343333 368999999996432 2344567899999999998887532
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||....... + ....|+.||+..|.+++++.
T Consensus 119 ~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sKaal~~~~~~la- 159 (258)
T PRK06398 119 LKQDKGVIINIASVQSFAVT----------R----------------------------NAAAYVTSKHAVLGLTRSIA- 159 (258)
T ss_pred HHcCCeEEEEeCcchhccCC----------C----------------------------CCchhhhhHHHHHHHHHHHH-
Confidence 234689999997543210 0 11359999999999998764
Q ss_pred cccccccccCCCceeEeccCccchh
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
..+++.+.+..++|.+|-..
T Consensus 160 -----~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 160 -----VDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred -----HHhCCCCEEEEEecCCccch
Confidence 34455577777788877533
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00078 Score=73.41 Aligned_cols=153 Identities=16% Similarity=0.043 Sum_probs=98.2
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhc---C--CccEEEEcCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLR---E--DVNIVFHVAA 82 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~---~--~VDiViH~AA 82 (1217)
.||+.+.-|....++|.+.... .+.++-.+.... ....++++.+|+++. ++++.+. . .+|+|||+|+
T Consensus 6 vtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 6 IVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADP------ASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred EEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCH------HHHHHHHHHhcCCCCCEEEECCC
Confidence 6788888888888888753221 111100000000 012356899999998 6665542 2 4899999998
Q ss_pred cCCc---------ccCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCccc-ccccccccccccCCCCChHHHHHHh
Q psy13944 83 TVKF---------DEHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 83 ~v~f---------~e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
.... .+.++..+++|+.|+.++++.+.+. ..-.++|++||... ++... .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------~----------- 140 (222)
T PRK06953 80 VYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--------G----------- 140 (222)
T ss_pred cccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc--------C-----------
Confidence 7521 1234578999999999999998652 12236899988643 22100 0
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccC
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~ 204 (1217)
.....|+.+|+..+.+++.+. .++++..++|+.+..+
T Consensus 141 -----------------~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 141 -----------------TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred -----------------CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 000249999999999998765 5778888998877655
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0007 Score=75.19 Aligned_cols=120 Identities=17% Similarity=0.130 Sum_probs=79.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ .++.++ .++|+|||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 51 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 124 (256)
T PRK08643 51 GKAIAVKADVSDRD------QVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEA 124 (256)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46888999999864 333332 368999999986421 2334568889999998888777642
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+...++|++||...... .| ....|+.||+..|.+++++
T Consensus 125 ~~~~~~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 166 (256)
T PRK08643 125 FKKLGHGGKIINATSQAGVVG----------NP----------------------------ELAVYSSTKFAVRGLTQTA 166 (256)
T ss_pred HHhcCCCCEEEEECccccccC----------CC----------------------------CCchhHHHHHHHHHHHHHH
Confidence 12247999988643211 01 0125999999999988776
Q ss_pred cccccccccccCCCceeEeccCccchh
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
.+ +-...++.+..++|.+|.-.
T Consensus 167 a~-----e~~~~gi~v~~i~Pg~v~t~ 188 (256)
T PRK08643 167 AR-----DLASEGITVNAYAPGIVKTP 188 (256)
T ss_pred HH-----HhcccCcEEEEEeeCCCcCh
Confidence 41 12245788888889877533
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00071 Score=75.46 Aligned_cols=116 Identities=15% Similarity=0.055 Sum_probs=79.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc----h----hcHHHHHHHHHHHHHHHHHHH---
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f----~----~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
++.++.+|+++++ ++.+++ ..+|+|||+||.... . +.++..+++|+.|+.++++..
T Consensus 51 ~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~ 124 (257)
T PRK07024 51 RVSVYAADVRDAD------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAP 124 (257)
T ss_pred eeEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHH
Confidence 6889999999854 343332 247999999996421 1 335578899999999988743
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..++|++||...... .| ....|+.||+..|.++.++
T Consensus 125 ~~~~-~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~l 165 (257)
T PRK07024 125 MRAA-RRGTLVGIASVAGVRG----------LP----------------------------GAGAYSASKAAAIKYLESL 165 (257)
T ss_pred HHhc-CCCEEEEEechhhcCC----------CC----------------------------CCcchHHHHHHHHHHHHHH
Confidence 333 4568999998654321 01 1125999999999999775
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.. +....++.+..++|..|-
T Consensus 166 ~~-----e~~~~gi~v~~v~Pg~v~ 185 (257)
T PRK07024 166 RV-----ELRPAGVRVVTIAPGYIR 185 (257)
T ss_pred HH-----HhhccCcEEEEEecCCCc
Confidence 31 112357889999998884
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00029 Score=77.79 Aligned_cols=122 Identities=15% Similarity=0.081 Sum_probs=77.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-hhcHHHHHHHHHHHHHHHHHHHHhc-CCCcE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEM-KNLDS 619 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-~~~~~~~~~~NV~GT~nLLelA~~~-~~lk~ 619 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... ...+...+++|+.|+.++++.+... ....+
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~ 129 (248)
T PRK07806 56 GRASAVGADLTDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSR 129 (248)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCce
Confidence 45788999999864 344333 358999999985321 2234456789999999999999863 22348
Q ss_pred EEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccccc
Q psy13944 620 FIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREK 699 (1217)
Q Consensus 620 fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~ 699 (1217)
+|++||..+... +..+. . .....|+.||+.+|.+++++.. +-
T Consensus 130 iv~isS~~~~~~--~~~~~---~----------------------------~~~~~Y~~sK~a~e~~~~~l~~-----~~ 171 (248)
T PRK07806 130 VVFVTSHQAHFI--PTVKT---M----------------------------PEYEPVARSKRAGEDALRALRP-----EL 171 (248)
T ss_pred EEEEeCchhhcC--ccccC---C----------------------------ccccHHHHHHHHHHHHHHHHHH-----Hh
Confidence 999999543211 00000 0 0013599999999999987641 11
Q ss_pred ccCCCceeEeccCcc
Q psy13944 700 CSHDRGVRVCRNHPV 714 (1217)
Q Consensus 700 ~~~~l~~~i~rp~~v 714 (1217)
-..++.+..++|.++
T Consensus 172 ~~~~i~v~~v~pg~~ 186 (248)
T PRK07806 172 AEKGIGFVVVSGDMI 186 (248)
T ss_pred hccCeEEEEeCCccc
Confidence 134566666666554
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00087 Score=73.98 Aligned_cols=117 Identities=15% Similarity=0.082 Sum_probs=80.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE-- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~-- 612 (1217)
.++.++.+|+++++ ++++++ ..+|+|||+|+.... .+.+...+++|+.|+.++.+.+.
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (252)
T PRK06138 53 GRAFARQGDVGSAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPI 126 (252)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 45889999999864 344433 368999999996431 12334578899999988776654
Q ss_pred --hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 613 --EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 613 --~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+. +.++|+++||..+.... ...+.|+.||+..|.+++.+
T Consensus 127 ~~~~-~~~~ii~~sS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~l 167 (252)
T PRK06138 127 MQRQ-GGGSIVNTASQLALAGG--------------------------------------RGRAAYVASKGAIASLTRAM 167 (252)
T ss_pred HHhc-CCeEEEEECChhhccCC--------------------------------------CCccHHHHHHHHHHHHHHHH
Confidence 33 45789999997543210 01135999999999999776
Q ss_pred cccccccccc-cCCCceeEeccCccch
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
. .++ ..++.+..++|..+..
T Consensus 168 ~------~~~~~~~i~v~~v~pg~~~t 188 (252)
T PRK06138 168 A------LDHATDGIRVNAVAPGTIDT 188 (252)
T ss_pred H------HHHHhcCeEEEEEEECCccC
Confidence 4 222 3478888889887753
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0011 Score=72.86 Aligned_cols=118 Identities=19% Similarity=0.231 Sum_probs=81.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCcc-cc-------chhcHHHHHHHHHHHHHHHHHHHHhc---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAAT-VK-------FDEHFQTAFEINCKGTEKLLKMAEEM--- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~-v~-------f~~~~~~~~~~NV~GT~nLLelA~~~--- 614 (1217)
.++.++.+|+++++ +++++.+ .+|+|||+|+. .. ..+.+...+++|+.|+.++++++...
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 122 (238)
T PRK08264 49 PRVVPLQLDVTDPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA 122 (238)
T ss_pred CceEEEEecCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 46889999999854 4555544 58999999997 21 12334467889999999999987631
Q ss_pred CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccc
Q psy13944 615 KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCA 694 (1217)
Q Consensus 615 ~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a 694 (1217)
.+..+||++||...+... .....|+.||+.+|.++.++...
T Consensus 123 ~~~~~~v~~sS~~~~~~~--------------------------------------~~~~~y~~sK~a~~~~~~~l~~~- 163 (238)
T PRK08264 123 NGGGAIVNVLSVLSWVNF--------------------------------------PNLGTYSASKAAAWSLTQALRAE- 163 (238)
T ss_pred cCCCEEEEEcChhhccCC--------------------------------------CCchHhHHHHHHHHHHHHHHHHH-
Confidence 245679999997654320 11235999999999999765411
Q ss_pred cccccccCCCceeEeccCccc
Q psy13944 695 RSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 695 ~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
....++.+..++|..|-
T Consensus 164 ----~~~~~i~~~~v~pg~v~ 180 (238)
T PRK08264 164 ----LAPQGTRVLGVHPGPID 180 (238)
T ss_pred ----hhhcCeEEEEEeCCccc
Confidence 11247788888887763
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0009 Score=73.52 Aligned_cols=121 Identities=20% Similarity=0.203 Sum_probs=82.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++++++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+.+.
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 128 (245)
T PRK12937 55 GRAIAVQADVADAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARH 128 (245)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHH
Confidence 46899999999854 4444433 68999999996532 2334467889999999999888643
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
..-.++|++||...... . +..+.|+.||+..|.+++++.+
T Consensus 129 ~~~~~~iv~~ss~~~~~~----------~----------------------------~~~~~Y~~sK~a~~~~~~~~a~- 169 (245)
T PRK12937 129 LGQGGRIINLSTSVIALP----------L----------------------------PGYGPYAASKAAVEGLVHVLAN- 169 (245)
T ss_pred hccCcEEEEEeeccccCC----------C----------------------------CCCchhHHHHHHHHHHHHHHHH-
Confidence 22248999988643221 0 0113599999999999976531
Q ss_pred ccccccccCCCceeEeccCccchhh
Q psy13944 694 ARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
+-...++.+..++|.++...+
T Consensus 170 ----~~~~~~i~v~~i~pg~~~t~~ 190 (245)
T PRK12937 170 ----ELRGRGITVNAVAPGPVATEL 190 (245)
T ss_pred ----HhhhcCeEEEEEEeCCccCch
Confidence 112346777888898876544
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00056 Score=78.81 Aligned_cols=148 Identities=14% Similarity=0.106 Sum_probs=97.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-HH--------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-FD--------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-fd--------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------~ 72 (1217)
.=+||+.+.-|....++|.+.....+ .+ .+.++....-.++..+.+|++++ ++...++ .
T Consensus 15 ~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~------~~~~~~~~~~~~~g 88 (306)
T PRK07792 15 AVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQR------ATADELVATAVGLG 88 (306)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCH------HHHHHHHHHHHHhC
Confidence 33788888888899888886322211 11 11111111234688999999997 6666554 3
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-----C-----CCCeEEEEcCccccccccccccc
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-----K-----NLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-----~-----~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++.+... . .-.++|++||.......
T Consensus 89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 162 (306)
T PRK07792 89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP------ 162 (306)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC------
Confidence 58999999997542 1235578899999999999887421 0 01379999986542210
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPS 199 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPs 199 (1217)
+ ....|+.||+..+.+++.++ .++.+..+.|+
T Consensus 163 ----~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 163 ----V----------------------------GQANYGAAKAGITALTLSAARALGRYGVRANAICPR 199 (306)
T ss_pred ----C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence 0 01359999999999887654 57888888886
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00078 Score=74.87 Aligned_cols=120 Identities=12% Similarity=0.044 Sum_probs=83.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (255)
T PRK07523 59 LSAHALAFDVTDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARH 132 (255)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35888999999854 4554443 47999999996432 2234467889999999999988742
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...... .+ ....|+.||+..|.+++++.
T Consensus 133 ~~~~~~g~iv~iss~~~~~~----------~~----------------------------~~~~y~~sK~a~~~~~~~~a 174 (255)
T PRK07523 133 MIARGAGKIINIASVQSALA----------RP----------------------------GIAPYTATKGAVGNLTKGMA 174 (255)
T ss_pred HHHhCCeEEEEEccchhccC----------CC----------------------------CCccHHHHHHHHHHHHHHHH
Confidence 23568999998643211 00 11259999999999998765
Q ss_pred ccccccccccCCCceeEeccCccchh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
. +-...++.+..++|.++...
T Consensus 175 ~-----e~~~~gi~v~~i~pg~~~t~ 195 (255)
T PRK07523 175 T-----DWAKHGLQCNAIAPGYFDTP 195 (255)
T ss_pred H-----HhhHhCeEEEEEEECcccCc
Confidence 1 11135788888899887543
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0011 Score=73.76 Aligned_cols=115 Identities=14% Similarity=0.098 Sum_probs=77.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHH-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAE- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~- 612 (1217)
.++.++.+|+++++ +.+.++ ..+|++||+|+... + .+.+...+++|+.|+..+++.+.
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (260)
T PRK12823 56 GEALALTADLETYA------GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLP 129 (260)
T ss_pred CeEEEEEEeCCCHH------HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45788999999853 333332 36899999998431 1 12344677899999886665554
Q ss_pred ---hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 613 ---EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 613 ---~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+. +..++|++||..+++. + ...|+.||+..|.++++
T Consensus 130 ~~~~~-~~g~iv~~sS~~~~~~-----------~-----------------------------~~~Y~~sK~a~~~~~~~ 168 (260)
T PRK12823 130 HMLAQ-GGGAIVNVSSIATRGI-----------N-----------------------------RVPYSAAKGGVNALTAS 168 (260)
T ss_pred HHHhc-CCCeEEEEcCccccCC-----------C-----------------------------CCccHHHHHHHHHHHHH
Confidence 32 4468999999765431 0 11499999999999987
Q ss_pred hcccccccccccCCCceeEeccCccc
Q psy13944 690 FWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+. ++-...++.+..++|.+|-
T Consensus 169 la-----~e~~~~gi~v~~v~Pg~v~ 189 (260)
T PRK12823 169 LA-----FEYAEHGIRVNAVAPGGTE 189 (260)
T ss_pred HH-----HHhcccCcEEEEEecCccC
Confidence 65 1122457888888998774
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0017 Score=77.95 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=67.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-H----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-F----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAAT 83 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-f----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~ 83 (1217)
-+||+.+.-|....++|.+.....+ . +.+.+.......++..+.+|++++ +++...++++|++||+||.
T Consensus 182 LITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~------~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 182 AVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE------AALAELLEKVDILIINHGI 255 (406)
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH------HHHHHHhCCCCEEEECCCc
Confidence 4789999999999999976322211 1 122111111122467889999998 7888888899999999986
Q ss_pred CCcc----cCHHHHHHHHHHHHHHHHHHhHh
Q psy13944 84 VKFD----EHFQTAFEINCKGTEKLLKMAEE 110 (1217)
Q Consensus 84 v~f~----e~l~~a~~vNV~GT~~LLelAk~ 110 (1217)
.... +.++..+++|+.|+.++++++..
T Consensus 256 ~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 256 NVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4321 23457899999999999999753
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.001 Score=73.28 Aligned_cols=119 Identities=23% Similarity=0.239 Sum_probs=80.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHH-------hcCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVL-------REDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L-------~~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++.. +...+ ...+|+|||+|+...+. +.++..+++|+.|+.++++.+...
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (249)
T PRK06500 52 ESALVIRADAGDVA------AQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL 125 (249)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35788999999853 22222 23689999999965421 334468899999999999999742
Q ss_pred -CCCcEEEEEccce-eecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 -KNLDSFIYVSTAY-SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 -~~lk~fV~vSTa~-v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
....++|++||.. .++. | ..+.|+.||+..|.++.++.
T Consensus 126 ~~~~~~~i~~~S~~~~~~~-----------~----------------------------~~~~Y~~sK~a~~~~~~~la- 165 (249)
T PRK06500 126 LANPASIVLNGSINAHIGM-----------P----------------------------NSSVYAASKAALLSLAKTLS- 165 (249)
T ss_pred HhcCCEEEEEechHhccCC-----------C----------------------------CccHHHHHHHHHHHHHHHHH-
Confidence 2234677776643 2221 1 11359999999999997764
Q ss_pred cccccccccCCCceeEeccCccchh
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
++-...++.+..++|.++...
T Consensus 166 ----~e~~~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 166 ----GELLPRGIRVNAVSPGPVQTP 186 (249)
T ss_pred ----HHhhhcCeEEEEEeeCcCCCH
Confidence 112245788889999888543
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=73.93 Aligned_cols=151 Identities=17% Similarity=0.103 Sum_probs=94.1
Q ss_pred ccCCCCCCcccHHHHHHHHhcChh---------HHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHH----HHh-----
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDA---------FDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEK----KVL----- 70 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~v---------fd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl----~~L----- 70 (1217)
+||+.+.-|....++|.+-....+ .+.+.++.. ....++..+.+|++++ +.+ +.+
T Consensus 6 ITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~------~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 6 VTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNS------ATLFSRCEAIIDACF 79 (267)
T ss_pred EeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCc------hhhHHHHHHHHHHHH
Confidence 678888888888888876322111 111111111 1123567789999997 322 222
Q ss_pred --cCCccEEEEcCccCCc------cc------------CHHHHHHHHHHHHHHHHHHhHhc-CC--------CCeEEEEc
Q psy13944 71 --REDVNIVFHVAATVKF------DE------------HFQTAFEINCKGTEKLLKMAEEM-KN--------LDSFIYVS 121 (1217)
Q Consensus 71 --~~~VDiViH~AA~v~f------~e------------~l~~a~~vNV~GT~~LLelAk~~-~~--------lk~fV~vS 121 (1217)
...+|+|||+||.... +. .+...+++|+.|+..+++.+... .. -..+|.+|
T Consensus 80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~ 159 (267)
T TIGR02685 80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC 159 (267)
T ss_pred HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence 2468999999986321 11 14577999999999998876432 11 12456665
Q ss_pred CcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEE
Q psy13944 122 TAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIV 196 (1217)
Q Consensus 122 Ta~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIv 196 (1217)
|...... . ..-+.|+.||+..|.+++..+ .|+.+..+
T Consensus 160 s~~~~~~----------~----------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v 201 (267)
T TIGR02685 160 DAMTDQP----------L----------------------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGV 201 (267)
T ss_pred hhhccCC----------C----------------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEE
Confidence 5432100 0 011469999999999987754 57999999
Q ss_pred ecceeccC
Q psy13944 197 RPSIVMPV 204 (1217)
Q Consensus 197 RPsiV~G~ 204 (1217)
+|+.+..+
T Consensus 202 ~PG~~~~~ 209 (267)
T TIGR02685 202 APGLSLLP 209 (267)
T ss_pred ecCCccCc
Confidence 99988654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00093 Score=76.40 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=82.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch--------hcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~--------~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++.+ .++.++ ..+|+|||+|+..... +.+...+++|+.|+.++++.+..
T Consensus 96 ~~~~~~~~Dl~~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~ 169 (290)
T PRK06701 96 VKCLLIPGDVSDEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALP 169 (290)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 46889999999854 333333 3579999999964221 23446889999999999999975
Q ss_pred c-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 614 M-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 614 ~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
. ....++|++||..++... + ....|+.||+..+.+++++.
T Consensus 170 ~~~~~g~iV~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~l~~~la- 210 (290)
T PRK06701 170 HLKQGSAIINTGSITGYEGN----------E----------------------------TLIDYSATKGAIHAFTRSLA- 210 (290)
T ss_pred HHhhCCeEEEEecccccCCC----------C----------------------------CcchhHHHHHHHHHHHHHHH-
Confidence 3 223589999998665321 0 01249999999999998764
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+..++|.+|-
T Consensus 211 -----~~~~~~gIrv~~i~pG~v~ 229 (290)
T PRK06701 211 -----QSLVQKGIRVNAVAPGPIW 229 (290)
T ss_pred -----HHhhhcCeEEEEEecCCCC
Confidence 222 357888888887764
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00079 Score=74.15 Aligned_cols=117 Identities=17% Similarity=0.147 Sum_probs=81.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+..
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (251)
T PRK07231 53 GRAIAVAADVSDEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVP 126 (251)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 45889999999864 4554443 57999999986422 133456889999998888877764
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+.++||++||..++... + ....|+.||+..+.+++.+
T Consensus 127 ~~~~~~~~~iv~~sS~~~~~~~----------~----------------------------~~~~y~~sk~~~~~~~~~~ 168 (251)
T PRK07231 127 AMRGEGGGAIVNVASTAGLRPR----------P----------------------------GLGWYNASKGAVITLTKAL 168 (251)
T ss_pred HHHhcCCcEEEEEcChhhcCCC----------C----------------------------CchHHHHHHHHHHHHHHHH
Confidence 2 245789999998665421 0 0124999999999888776
Q ss_pred ccccccccccc-CCCceeEeccCccc
Q psy13944 691 WGCARSREKCS-HDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~-~~l~~~i~rp~~v~ 715 (1217)
. .+++ .++.+..++|..+.
T Consensus 169 a------~~~~~~~i~v~~i~pg~~~ 188 (251)
T PRK07231 169 A------AELGPDKIRVNAVAPVVVE 188 (251)
T ss_pred H------HHhhhhCeEEEEEEECccC
Confidence 4 2232 37788888888875
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.001 Score=74.34 Aligned_cols=192 Identities=14% Similarity=0.080 Sum_probs=117.2
Q ss_pred CcccCCCC-CCcccHHHHHHHHhcChh-----HHHhhhcC---cc-c-CCCeEEEEccCCCCCCCCCHHHHHHhc-----
Q psy13944 8 LGHNGAKT-CKHNSILWVAKDFFADDA-----FDRLRKEN---AN-F-TERIVVLTADLQSDGLGLDEKEKKVLR----- 71 (1217)
Q Consensus 8 ~g~tg~r~-kkg~~~~eRL~~~l~~~v-----fd~Lr~~~---p~-~-~~kI~~V~GDl~d~~LGLs~edl~~L~----- 71 (1217)
.-+||+.+ .-|....++|.+.....+ -+.+.+.. .. . ..++..+.+|++++ ++++.++
T Consensus 20 vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~ 93 (262)
T PRK07831 20 VLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSE------AQVDALIDAAVE 93 (262)
T ss_pred EEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCH------HHHHHHHHHHHH
Confidence 44788774 578888888876322111 11111110 01 1 13688999999987 6666554
Q ss_pred --CCccEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCcccccccccccccccC
Q psy13944 72 --EDVNIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 72 --~~VDiViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
..+|+|||+|+... +. +.+...+++|+.|+..+++.+... .. -.++|++||......
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~---------- 163 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA---------- 163 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC----------
Confidence 35799999999642 11 234567889999999988887531 11 347888888543211
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
.+ ....|+.||++.|.+++.++ .++.+..++|+.+..+...-
T Consensus 164 ~~----------------------------~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~----- 210 (262)
T PRK07831 164 QH----------------------------GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK----- 210 (262)
T ss_pred CC----------------------------CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc-----
Confidence 00 01359999999999987654 57999999999888764211
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.. .......+.... ...-+...+|++++++.++..
T Consensus 211 --~~-~~~~~~~~~~~~---------~~~r~~~p~~va~~~~~l~s~ 245 (262)
T PRK07831 211 --VT-SAELLDELAARE---------AFGRAAEPWEVANVIAFLASD 245 (262)
T ss_pred --cc-CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCc
Confidence 00 112222222111 011256778999998876654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0011 Score=73.59 Aligned_cols=117 Identities=12% Similarity=0.091 Sum_probs=79.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+..
T Consensus 47 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 120 (252)
T PRK07856 47 RPAEFHAADVRDPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAV 120 (252)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45888999999853 4444433 46999999985421 123457889999999999998864
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ .+..+||++||...... .| ....|+.||+..|.+++++
T Consensus 121 ~~~~~~~g~ii~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~l~~~l 162 (252)
T PRK07856 121 MQQQPGGGSIVNIGSVSGRRP----------SP----------------------------GTAAYGAAKAGLLNLTRSL 162 (252)
T ss_pred HHhcCCCcEEEEEcccccCCC----------CC----------------------------CCchhHHHHHHHHHHHHHH
Confidence 1 12358999999754321 00 1135999999999999876
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ..++..+.+..++|-+|-
T Consensus 163 a------~e~~~~i~v~~i~Pg~v~ 181 (252)
T PRK07856 163 A------VEWAPKVRVNAVVVGLVR 181 (252)
T ss_pred H------HHhcCCeEEEEEEecccc
Confidence 4 334444666667787664
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0013 Score=73.92 Aligned_cols=155 Identities=16% Similarity=0.133 Sum_probs=101.9
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcChh-H----HHh---hhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFADDA-F----DRL---RKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~~v-f----d~L---r~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
|+ .=+||+.+.-|....++|.+...+.+ . +.+ .++... ...++.++.+|++++ ++++.+++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~i~~~~~~~~ 81 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKR------EDLERTVKELK 81 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH------HHHHHHHHHHH
Confidence 44 34799999999999999987432211 1 111 111111 124688999999998 67766654
Q ss_pred ---CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 ---DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ---~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|++||+|+.... . +.++..+++|+.|...+.+.+.. + .+..++|++||.......
T Consensus 82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~---------- 151 (263)
T PRK08339 82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI---------- 151 (263)
T ss_pred hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC----------
Confidence 58999999986432 1 23557889999887776655432 1 234689999997642210
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
| ....|+.+|+.-+.+.+..+ .|+.+..+.|+.|-.+
T Consensus 152 ~----------------------------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 152 P----------------------------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred C----------------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 0 01359999998888776553 5788999999987554
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00097 Score=72.78 Aligned_cols=117 Identities=15% Similarity=0.147 Sum_probs=80.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++. +++.++ ..+|+|||+|+.... .+..+..+++|+.|+.++++.|...
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (239)
T TIGR01830 48 VKALGVVCDVSDRE------DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRI 121 (239)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35889999999854 344443 347999999997532 1334567889999999999998752
Q ss_pred ---CCCcEEEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++..+|+++||... +|. | ....|+.+|++.|.++..+
T Consensus 122 ~~~~~~~~~v~~sS~~~~~g~-----------~----------------------------~~~~y~~~k~a~~~~~~~l 162 (239)
T TIGR01830 122 MIKQRSGRIINISSVVGLMGN-----------A----------------------------GQANYAASKAGVIGFTKSL 162 (239)
T ss_pred HHhcCCeEEEEECCccccCCC-----------C----------------------------CCchhHHHHHHHHHHHHHH
Confidence 24568999999643 332 0 0125999999888888665
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+ +....++.+.+++|.++.
T Consensus 163 ~~-----~~~~~g~~~~~i~pg~~~ 182 (239)
T TIGR01830 163 AK-----ELASRNITVNAVAPGFID 182 (239)
T ss_pred HH-----HHhhcCeEEEEEEECCCC
Confidence 31 111357888888887764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0012 Score=72.25 Aligned_cols=116 Identities=10% Similarity=0.084 Sum_probs=79.2
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhc------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---C
Q psy13944 552 VVLTADLQSDGLGLDEKAKEVLRE------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---K 615 (1217)
Q Consensus 552 ~~V~GDltd~~LGLs~~~~~~L~~------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~ 615 (1217)
+++.+|+++++ +++.+++ ++|+|||+|+.... .+.+...+++|+.|+.++.+.+... .
T Consensus 44 ~~~~~D~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 117 (234)
T PRK07577 44 ELFACDLADIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR 117 (234)
T ss_pred eEEEeeCCCHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46789999853 3444333 57999999997543 1234467889999998887766431 2
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
+..++|++||...++.. ....|+.||+..|.+++++.+
T Consensus 118 ~~~~iv~~sS~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~a~--- 155 (234)
T PRK07577 118 EQGRIVNICSRAIFGAL---------------------------------------DRTSYSAAKSALVGCTRTWAL--- 155 (234)
T ss_pred CCcEEEEEccccccCCC---------------------------------------CchHHHHHHHHHHHHHHHHHH---
Confidence 45689999998654320 012599999999999977541
Q ss_pred ccccccCCCceeEeccCccchh
Q psy13944 696 SREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 696 ~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
+-...++.+..++|.++...
T Consensus 156 --e~~~~gi~v~~i~pg~~~t~ 175 (234)
T PRK07577 156 --ELAEYGITVNAVAPGPIETE 175 (234)
T ss_pred --HHHhhCcEEEEEecCcccCc
Confidence 11134788888899888643
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0013 Score=71.87 Aligned_cols=117 Identities=16% Similarity=0.122 Sum_probs=80.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..+. ..+|+|||+|+..... +.+...+.+|+.|+.++++.+...
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (248)
T PRK05557 55 GKALAVQGDVSDAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARP 128 (248)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999864 333332 3689999999964321 234467889999999999988753
Q ss_pred ---CCCcEEEEEccceee-cCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KNLDSFIYVSTAYSN-CNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~-g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+.++||++||.... +. + ....|+.+|++.|.+++.+
T Consensus 129 ~~~~~~~~~v~iss~~~~~~~-----------~----------------------------~~~~y~~sk~a~~~~~~~~ 169 (248)
T PRK05557 129 MMKQRSGRIINISSVVGLMGN-----------P----------------------------GQANYAASKAGVIGFTKSL 169 (248)
T ss_pred HHhcCCeEEEEEcccccCcCC-----------C----------------------------CCchhHHHHHHHHHHHHHH
Confidence 234679999986432 21 0 0135999999999888765
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+. ....++.+..++|.++.
T Consensus 170 a~~-----~~~~~i~~~~v~pg~~~ 189 (248)
T PRK05557 170 ARE-----LASRGITVNAVAPGFIE 189 (248)
T ss_pred HHH-----hhhhCeEEEEEecCccC
Confidence 421 12346778888887763
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00063 Score=74.91 Aligned_cols=118 Identities=15% Similarity=0.119 Sum_probs=80.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+. ..+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (250)
T PRK12939 56 GRAHAIAADLADPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH 129 (250)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46899999999854 444443 468999999996432 2334567889999999999888642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||....... + ....|+.||+..|.+++.+.
T Consensus 130 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~y~~sK~~~~~~~~~l~ 171 (250)
T PRK12939 130 LRDSGRGRIVNLASDTALWGA----------P----------------------------KLGAYVASKGAVIGMTRSLA 171 (250)
T ss_pred HHHcCCeEEEEECchhhccCC----------C----------------------------CcchHHHHHHHHHHHHHHHH
Confidence 123489999996543210 0 01249999999999997653
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+..++|-+|.
T Consensus 172 -----~~~~~~~i~v~~v~pg~v~ 190 (250)
T PRK12939 172 -----RELGGRGITVNAIAPGLTA 190 (250)
T ss_pred -----HHHhhhCEEEEEEEECCCC
Confidence 1112346777777887664
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00097 Score=74.32 Aligned_cols=117 Identities=16% Similarity=0.217 Sum_probs=81.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 63 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 136 (258)
T PRK06935 63 RKVTFVQVDLTKPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKV 136 (258)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 46889999999854 3444433 68999999996431 2244467889999988888766531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||..++... .....|+.||+..|.+++++.
T Consensus 137 ~~~~~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asK~a~~~~~~~la 178 (258)
T PRK06935 137 MAKQGSGKIINIASMLSFQGG--------------------------------------KFVPAYTASKHGVAGLTKAFA 178 (258)
T ss_pred HHhcCCeEEEEECCHHhccCC--------------------------------------CCchhhHHHHHHHHHHHHHHH
Confidence 234689999997543220 011259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..++|.+|-
T Consensus 179 ------~e~~~~gi~v~~i~PG~v~ 197 (258)
T PRK06935 179 ------NELAAYNIQVNAIAPGYIK 197 (258)
T ss_pred ------HHhhhhCeEEEEEEecccc
Confidence 233 347888888888775
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00084 Score=74.26 Aligned_cols=151 Identities=15% Similarity=0.086 Sum_probs=95.1
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhHH-----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc---------
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAFD-----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDV--------- 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vfd-----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V--------- 74 (1217)
.+|+.+.-|....++|.+...+ -+.+ .+.+.......+++++.+|++++ ++++.+++++
T Consensus 6 ItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 6 ITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDV------HELETNFNEILSSIQEDNV 79 (251)
T ss_pred EecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCH------HHHHHHHHHHHHhcCcccC
Confidence 5777788888888888763211 1111 11111112235788999999998 6776655432
Q ss_pred --cEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 75 --NIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 75 --DiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+++|+||.... . +.+...+++|+.|+..+++.+.. .....++|++||..+... ++
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------~~-- 149 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP--------YF-- 149 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC--------CC--
Confidence 178999987532 1 22446788899997766655533 223458999999754211 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.+|+..|.+++.++ .++.+..++|+.+-.+
T Consensus 150 ----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 150 ----------------------------GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred ----------------------------CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 01369999999999987654 3577888899876543
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00069 Score=75.37 Aligned_cols=119 Identities=15% Similarity=0.122 Sum_probs=80.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---ch---hcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---FD---EHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f~---~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+||... ++ +.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 133 (255)
T PRK06113 60 GQAFACRCDITSEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 35888999999854 333332 35799999999643 22 344467899999999999998631
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||..+... . .....|+.||+..|.+++++.+
T Consensus 134 ~~~~~~~iv~isS~~~~~~----------~----------------------------~~~~~Y~~sK~a~~~~~~~la~ 175 (255)
T PRK06113 134 EKNGGGVILTITSMAAENK----------N----------------------------INMTSYASSKAAASHLVRNMAF 175 (255)
T ss_pred HhcCCcEEEEEecccccCC----------C----------------------------CCcchhHHHHHHHHHHHHHHHH
Confidence 12348999999753211 0 0113599999999999987641
Q ss_pred cccccccccCCCceeEeccCccch
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+-...++.+.++.|-.+..
T Consensus 176 -----~~~~~~i~v~~v~pg~~~t 194 (255)
T PRK06113 176 -----DLGEKNIRVNGIAPGAILT 194 (255)
T ss_pred -----HhhhhCeEEEEEecccccc
Confidence 1123456677777877753
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0011 Score=72.55 Aligned_cols=118 Identities=16% Similarity=0.167 Sum_probs=80.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+||..... +.+...++.|+.|+.++++.+...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 127 (246)
T PRK05653 54 GEARVLVFDVSDEA------AVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPP 127 (246)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999864 333333 3579999999875432 234467889999999999888531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+.++||++||...... . .....|+.+|+..|.++.++.
T Consensus 128 l~~~~~~~ii~~ss~~~~~~----------~----------------------------~~~~~y~~sk~~~~~~~~~l~ 169 (246)
T PRK05653 128 MIKARYGRIVNISSVSGVTG----------N----------------------------PGQTNYSAAKAGVIGFTKALA 169 (246)
T ss_pred HHhcCCcEEEEECcHHhccC----------C----------------------------CCCcHhHhHHHHHHHHHHHHH
Confidence 25679999998643211 0 011359999999998887754
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+ +-...++.+.+++|..+.
T Consensus 170 ~-----~~~~~~i~~~~i~pg~~~ 188 (246)
T PRK05653 170 L-----ELASRGITVNAVAPGFID 188 (246)
T ss_pred H-----HHhhcCeEEEEEEeCCcC
Confidence 1 112347888888888774
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00067 Score=75.27 Aligned_cols=118 Identities=15% Similarity=0.165 Sum_probs=82.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+... + .+.+...+++|+.|+..+++.+..
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (258)
T PRK07890 54 RRALAVPTDITDED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTP 127 (258)
T ss_pred CceEEEecCCCCHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46889999999854 343333 36799999998532 1 234457889999999999999975
Q ss_pred c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
. +.-.+||++||...... .+ ..+.|+.||+..|.++.++.
T Consensus 128 ~~~~~~~~ii~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~l~~~~a 169 (258)
T PRK07890 128 ALAESGGSIVMINSMVLRHS----------QP----------------------------KYGAYKMAKGALLAASQSLA 169 (258)
T ss_pred HHHhCCCEEEEEechhhccC----------CC----------------------------CcchhHHHHHHHHHHHHHHH
Confidence 2 12248999999754321 00 11359999999999998775
Q ss_pred ccccccccc-cCCCceeEeccCccch
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
..+ ..++.+..++|..|..
T Consensus 170 ------~~~~~~~i~v~~v~pg~v~~ 189 (258)
T PRK07890 170 ------TELGPQGIRVNSVAPGYIWG 189 (258)
T ss_pred ------HHHhhcCcEEEEEeCCccCc
Confidence 222 3468888888987753
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0008 Score=74.75 Aligned_cols=118 Identities=16% Similarity=0.090 Sum_probs=78.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccch--------hcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f~--------~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +.+.+++ .+|++||+|+..... +.++..+++|+.|+..+.+.+..
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 128 (254)
T PRK07478 55 GEAVALAGDVRDEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIP 128 (254)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 35888999999864 3444432 689999999964311 23457789999988887665442
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+-.++|++||...+... .+ ....|+.||++.+.+++++
T Consensus 129 ~l~~~~~~~iv~~sS~~~~~~~---------~~----------------------------~~~~Y~~sK~a~~~~~~~l 171 (254)
T PRK07478 129 AMLARGGGSLIFTSTFVGHTAG---------FP----------------------------GMAAYAASKAGLIGLTQVL 171 (254)
T ss_pred HHHhcCCceEEEEechHhhccC---------CC----------------------------CcchhHHHHHHHHHHHHHH
Confidence 1 134579999997543210 00 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ .+++.+..+.|-+|.
T Consensus 172 a------~e~~~~gi~v~~v~PG~v~ 191 (254)
T PRK07478 172 A------AEYGAQGIRVNALLPGGTD 191 (254)
T ss_pred H------HHHhhcCEEEEEEeeCccc
Confidence 4 223 346777777887774
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0012 Score=73.52 Aligned_cols=119 Identities=17% Similarity=0.167 Sum_probs=79.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHH-------hcCccEEEEcCccccc---------hhcHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVL-------REDVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L-------~~~vdvVfH~AA~v~f---------~~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.++.++.+|+++++ +.+.+ ...+|+|||+|+.... .+.++..+++|+.|+.++++.+.
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 122 (260)
T PRK06523 49 EGVEFVAADLTTAE------GCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALL 122 (260)
T ss_pred CceeEEecCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 35788999999854 23322 2457999999985321 23455778899999988876654
Q ss_pred hc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 613 EM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 613 ~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.. .+..++|++||....... + .....|+.||+..|.++++
T Consensus 123 ~~~~~~~~g~ii~isS~~~~~~~----------~---------------------------~~~~~Y~~sK~a~~~l~~~ 165 (260)
T PRK06523 123 PGMIARGSGVIIHVTSIQRRLPL----------P---------------------------ESTTAYAAAKAALSTYSKS 165 (260)
T ss_pred HHHHhcCCcEEEEEecccccCCC----------C---------------------------CCcchhHHHHHHHHHHHHH
Confidence 21 134579999997543210 0 0113599999999999987
Q ss_pred hcccccccccc-cCCCceeEeccCccch
Q psy13944 690 FWGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 690 y~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
+. +.+ ..++.+..++|.+|-.
T Consensus 166 ~a------~~~~~~gi~v~~i~Pg~v~t 187 (260)
T PRK06523 166 LS------KEVAPKGVRVNTVSPGWIET 187 (260)
T ss_pred HH------HHHhhcCcEEEEEecCcccC
Confidence 64 222 3578888889988753
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0013 Score=73.26 Aligned_cols=119 Identities=17% Similarity=0.020 Sum_probs=81.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh--------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR--------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~--------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++.+ ++.+++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+..
T Consensus 48 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 121 (260)
T PRK08267 48 GNAWTGALDVTDRA------AWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALP 121 (260)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46889999999854 333332 357999999996532 134557889999999999988853
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..++|++||...... .+ ....|+.||+..|.+.+++
T Consensus 122 ~~~~~~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sKaa~~~~~~~l 163 (260)
T PRK08267 122 YLKATPGARVINTSSASAIYG----------QP----------------------------GLAVYSATKFAVRGLTEAL 163 (260)
T ss_pred HHHhCCCCEEEEeCchhhCcC----------CC----------------------------CchhhHHHHHHHHHHHHHH
Confidence 1 23468999999643211 00 1135999999999988765
Q ss_pred cccccccccccCCCceeEeccCccch
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
.. +....++.+..++|..+-.
T Consensus 164 ~~-----~~~~~~i~v~~i~pg~~~t 184 (260)
T PRK08267 164 DL-----EWRRHGIRVADVMPLFVDT 184 (260)
T ss_pred HH-----HhcccCcEEEEEecCCcCC
Confidence 41 1123578888888877753
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00087 Score=74.77 Aligned_cols=151 Identities=15% Similarity=0.083 Sum_probs=94.1
Q ss_pred ccCCCCCCcccHHHHHHHHhc---Chh---------HHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcCC--
Q psy13944 10 HNGAKTCKHNSILWVAKDFFA---DDA---------FDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRED-- 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~---~~v---------fd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~-- 73 (1217)
+||+.+.-|....++|.+.+. ..+ .+.+.++... ...++.++.+|++++ ++++.+++.
T Consensus 5 ItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~------~~v~~~~~~~~ 78 (256)
T TIGR01500 5 VTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAE------AGLEQLLKALR 78 (256)
T ss_pred EecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCH------HHHHHHHHHHH
Confidence 577777777777777765211 111 0111111101 123678899999998 666554432
Q ss_pred ---------ccEEEEcCccCC-----cc-----cCHHHHHHHHHHHHHHHHHHhHhc-C---C-CCeEEEEcCccccccc
Q psy13944 74 ---------VNIVFHVAATVK-----FD-----EHFQTAFEINCKGTEKLLKMAEEM-K---N-LDSFIYVSTAYSNCNI 129 (1217)
Q Consensus 74 ---------VDiViH~AA~v~-----f~-----e~l~~a~~vNV~GT~~LLelAk~~-~---~-lk~fV~vSTa~v~g~~ 129 (1217)
.++|||+||... +. +.++..+++|+.|+..+.+.+.+. . + -.++|++||......
T Consensus 79 ~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~- 157 (256)
T TIGR01500 79 ELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP- 157 (256)
T ss_pred hccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC-
Confidence 258999998632 11 234578999999998887766532 1 1 247999999754211
Q ss_pred ccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 130 KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 130 ~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.| .-..|+.||+..+.+.+..+ .++.+..+.|+.|-.+
T Consensus 158 ---------~~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 158 ---------FK----------------------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred ---------CC----------------------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 00 01359999999998887653 5688888888877544
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00086 Score=73.25 Aligned_cols=154 Identities=14% Similarity=0.069 Sum_probs=97.6
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCc--ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----CccEEEEcC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENA--NFTERIVVLTADLQSDGLGLDEKEKKVLRE-----DVNIVFHVA 81 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-----~VDiViH~A 81 (1217)
+||+.+.-|....++|.+.... -+.++-.+..+ ....++.++.+|++++ ++++.+.+ ++|+|||+|
T Consensus 6 ItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 6 IIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDP------ASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred EeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCH------HHHHHHHHHhhcCCCCEEEEcC
Confidence 6788888899999999873211 11111000000 1124677889999987 66655543 589999999
Q ss_pred ccCCc-----c----cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 82 ATVKF-----D----EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 82 A~v~f-----~----e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
+.... . +.+...+++|+.|+..+++.+... .+-..++++||.+..... + +
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~--------~-~---------- 140 (225)
T PRK08177 80 GISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVEL--------P-D---------- 140 (225)
T ss_pred cccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccccc--------C-C----------
Confidence 87522 1 123467788999999998887642 122467888875421110 0 0
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
...+ ..|+.+|++.|.+++.++ .++.+..++|+.+-.+
T Consensus 141 ---------------~~~~-~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 141 ---------------GGEM-PLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred ---------------CCCc-cchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 0111 259999999999998764 4677888999877655
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0014 Score=72.98 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=78.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++.. ++..++ ..+|+|||+|+.... .+.+...+++|+.|+.++++.+...
T Consensus 59 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (258)
T PRK09134 59 RRAVALQADLADEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARA 132 (258)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999854 333332 357999999985321 2344578899999999999988753
Q ss_pred -C--CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 -K--NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 -~--~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
. .-.++|++||...... .| ....|+.||+..|.+++++.
T Consensus 133 ~~~~~~~~iv~~~s~~~~~~----------~p----------------------------~~~~Y~~sK~a~~~~~~~la 174 (258)
T PRK09134 133 LPADARGLVVNMIDQRVWNL----------NP----------------------------DFLSYTLSKAALWTATRTLA 174 (258)
T ss_pred HHhcCCceEEEECchhhcCC----------CC----------------------------CchHHHHHHHHHHHHHHHHH
Confidence 1 2246777776533211 01 01259999999999998764
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+.++.++.+..++|-++.
T Consensus 175 ------~~~~~~i~v~~i~PG~v~ 192 (258)
T PRK09134 175 ------QALAPRIRVNAIGPGPTL 192 (258)
T ss_pred ------HHhcCCcEEEEeeccccc
Confidence 334445777777887663
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.001 Score=73.16 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=79.6
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc---CC-
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KN- 616 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~---~~- 616 (1217)
+.++.+|++++. +++.+.+ .+|+|||+|+..... +.++..+++|+.|+.++++.+.+. ++
T Consensus 55 ~~~~~~D~~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 128 (245)
T PRK07060 55 CEPLRLDVGDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR 128 (245)
T ss_pred CeEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 467889998853 3444443 589999999965321 234467789999999999988753 11
Q ss_pred CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccc
Q psy13944 617 LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARS 696 (1217)
Q Consensus 617 lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~ 696 (1217)
..+||++||...+... + ....|+.||+.+|.++.++.
T Consensus 129 ~~~iv~~sS~~~~~~~----------~----------------------------~~~~y~~sK~a~~~~~~~~a----- 165 (245)
T PRK07060 129 GGSIVNVSSQAALVGL----------P----------------------------DHLAYCASKAALDAITRVLC----- 165 (245)
T ss_pred CcEEEEEccHHHcCCC----------C----------------------------CCcHhHHHHHHHHHHHHHHH-----
Confidence 2589999997544320 0 11259999999999998764
Q ss_pred cccc-cCCCceeEeccCccc
Q psy13944 697 REKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 697 ~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..++|.++-
T Consensus 166 -~~~~~~~i~v~~v~pg~v~ 184 (245)
T PRK07060 166 -VELGPHGIRVNSVNPTVTL 184 (245)
T ss_pred -HHHhhhCeEEEEEeeCCCC
Confidence 222 246888888888774
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0014 Score=72.42 Aligned_cols=120 Identities=14% Similarity=0.166 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++++|+++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (252)
T PRK08220 48 YPFATFVLDVSDAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQ 121 (252)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999854 4554443 47999999996542 2344578899999999999988632
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||....... .....|+.||+..|.+++++.
T Consensus 122 ~~~~~~g~iv~~ss~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~la 163 (252)
T PRK08220 122 FRRQRSGAIVTVGSNAAHVPR--------------------------------------IGMAAYGASKAALTSLAKCVG 163 (252)
T ss_pred HHhCCCCEEEEECCchhccCC--------------------------------------CCCchhHHHHHHHHHHHHHHH
Confidence 134579999997542210 011359999999999997764
Q ss_pred ccccccccccCCCceeEeccCccchh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
+ +-...++.+..++|.+|...
T Consensus 164 ~-----e~~~~~i~v~~i~pg~v~t~ 184 (252)
T PRK08220 164 L-----ELAPYGVRCNVVSPGSTDTD 184 (252)
T ss_pred H-----HhhHhCeEEEEEecCcCcch
Confidence 1 12245688888899888543
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00093 Score=74.11 Aligned_cols=121 Identities=14% Similarity=0.126 Sum_probs=82.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..+.+ .+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (258)
T PRK06949 58 GAAHVVSLDVTDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKR 131 (258)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 36889999999853 4444433 58999999996332 1345567889999999999877531
Q ss_pred ---CC--------CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHH
Q psy13944 615 ---KN--------LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAW 683 (1217)
Q Consensus 615 ---~~--------lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lA 683 (1217)
.. -.++|++||..+.... .....|+.||+..
T Consensus 132 ~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sK~a~ 173 (258)
T PRK06949 132 MIARAKGAGNTKPGGRIINIASVAGLRVL--------------------------------------PQIGLYCMSKAAV 173 (258)
T ss_pred HHhcCCcCCCCCCCeEEEEECcccccCCC--------------------------------------CCccHHHHHHHHH
Confidence 01 2479999987653210 0123599999999
Q ss_pred HHHhhhhcccccccccccCCCceeEeccCccchhh
Q psy13944 684 YIICLSFWGCARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 684 E~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
|.+++++.. +....++.+.+++|..|...+
T Consensus 174 ~~~~~~la~-----~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 174 VHMTRAMAL-----EWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred HHHHHHHHH-----HHHhcCeEEEEEeeCCCcCCc
Confidence 999987641 122357888889998886443
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=72.77 Aligned_cols=153 Identities=16% Similarity=0.131 Sum_probs=97.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh------------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD------------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL----- 70 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~------------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L----- 70 (1217)
.-.+|+.+.-|....+.|.+..... ..+.+++. ....+..+.+|+++.. .+++..+
T Consensus 9 vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~----~~~~~~~~~~i~ 81 (239)
T PRK08703 9 ILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA---GHPEPFAIRFDLMSAE----EKEFEQFAATIA 81 (239)
T ss_pred EEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc---CCCCcceEEeeecccc----hHHHHHHHHHHH
Confidence 4578888888888888887631110 11111111 1234667889987631 1233222
Q ss_pred --c-CCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccc
Q psy13944 71 --R-EDVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 71 --~-~~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
+ .++|+|||+||... +. +.+...+++|+.|+..+++.+.+. .+-.++|++||.....
T Consensus 82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~--------- 152 (239)
T PRK08703 82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET--------- 152 (239)
T ss_pred HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc---------
Confidence 2 56899999999642 11 223467899999999988887542 2335899998854311
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc------CCCCEEEEecceeccCC
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM------DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~------~gLPvvIvRPsiV~G~~ 205 (1217)
+.+ .-..|+.||+..|.+++.++ +++.+.+++||.|.++.
T Consensus 153 -~~~----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 153 -PKA----------------------------YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred -CCC----------------------------CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 000 01359999999999986654 25889999999998874
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0014 Score=72.85 Aligned_cols=117 Identities=10% Similarity=0.092 Sum_probs=77.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH----
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA---- 611 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA---- 611 (1217)
++.++.+|+++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+..+...+
T Consensus 52 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~ 125 (255)
T PRK06463 52 GVFTIKCDVGNRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLL 125 (255)
T ss_pred CCeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 4778999999854 344433 358999999986421 2334467899999976654443
Q ss_pred HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 612 EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 612 ~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
++. +..++|++||..+++.. .+ ....|+.||+..+.+++++.
T Consensus 126 ~~~-~~g~iv~isS~~~~~~~---------~~----------------------------~~~~Y~asKaa~~~~~~~la 167 (255)
T PRK06463 126 KLS-KNGAIVNIASNAGIGTA---------AE----------------------------GTTFYAITKAGIIILTRRLA 167 (255)
T ss_pred Hhc-CCcEEEEEcCHHhCCCC---------CC----------------------------CccHhHHHHHHHHHHHHHHH
Confidence 332 34689999997654320 00 01249999999999997764
Q ss_pred ccccccccc-cCCCceeEeccCccch
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
..+ ..++.+..++|-+|..
T Consensus 168 ------~e~~~~~i~v~~i~Pg~v~t 187 (255)
T PRK06463 168 ------FELGKYGIRVNAVAPGWVET 187 (255)
T ss_pred ------HHhhhcCeEEEEEeeCCCCC
Confidence 222 3467777888877753
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0025 Score=70.39 Aligned_cols=121 Identities=12% Similarity=0.014 Sum_probs=81.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+||.... .+.....+++|+.|+.++++.+...
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (248)
T PRK08251 53 IKVAVAALDVNDHD------QVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEI 126 (248)
T ss_pred ceEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999864 333332 368999999985432 1233467889999999998887521
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||....... | .....|+.||+..+.++.++.
T Consensus 127 ~~~~~~~~iv~~sS~~~~~~~----------~---------------------------~~~~~Y~~sK~a~~~~~~~l~ 169 (248)
T PRK08251 127 FREQGSGHLVLISSVSAVRGL----------P---------------------------GVKAAYAASKAGVASLGEGLR 169 (248)
T ss_pred HHhcCCCeEEEEeccccccCC----------C---------------------------CCcccHHHHHHHHHHHHHHHH
Confidence 246689999996432210 0 001359999999998887664
Q ss_pred ccccccccccCCCceeEeccCccchh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
++-...++.+..++|..|...
T Consensus 170 -----~~~~~~~i~v~~v~pg~v~t~ 190 (248)
T PRK08251 170 -----AELAKTPIKVSTIEPGYIRSE 190 (248)
T ss_pred -----HHhcccCcEEEEEecCcCcch
Confidence 111235778888888888543
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0019 Score=72.71 Aligned_cols=119 Identities=12% Similarity=0.098 Sum_probs=80.8
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
++.++.+|+++++ +++.++ .++|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 45 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 118 (274)
T PRK05693 45 GFTAVQLDVNDGA------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLL 118 (274)
T ss_pred CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3678899999853 344333 368999999996432 2345578899999999999887532
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
++..++|++||...... .| ....|+.||+..|.++.++..
T Consensus 119 ~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~al~~~~~~l~~- 159 (274)
T PRK05693 119 RRSRGLVVNIGSVSGVLV----------TP----------------------------FAGAYCASKAAVHALSDALRL- 159 (274)
T ss_pred hhcCCEEEEECCccccCC----------CC----------------------------CccHHHHHHHHHHHHHHHHHH-
Confidence 12357899988654321 01 113599999999998876541
Q ss_pred ccccccccCCCceeEeccCccchh
Q psy13944 694 ARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
+....++.+..++|.+|.-.
T Consensus 160 ----e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 160 ----ELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred ----HhhhhCeEEEEEecCccccc
Confidence 12245788888999888543
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0023 Score=71.34 Aligned_cols=118 Identities=20% Similarity=0.164 Sum_probs=80.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc---hh-----cHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF---DE-----HFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f---~~-----~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ .++.++ ..+|+|||+|+.... .+ .+...+++|+.|+.++++.+..
T Consensus 50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 123 (263)
T PRK06181 50 GEALVVPTDVSDAE------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALP 123 (263)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999999854 344333 268999999986432 11 1346689999999999999863
Q ss_pred c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
. .+..++|++||..++... + ....|+.||+..|.+++++.
T Consensus 124 ~~~~~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~~~~~~~~~l~ 165 (263)
T PRK06181 124 HLKASRGQIVVVSSLAGLTGV----------P----------------------------TRSGYAASKHALHGFFDSLR 165 (263)
T ss_pred HHHhcCCEEEEEecccccCCC----------C----------------------------CccHHHHHHHHHHHHHHHHH
Confidence 2 234689999997654320 0 01259999999999997753
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. +....++.+..++|-.|.
T Consensus 166 ~-----~~~~~~i~~~~i~pg~v~ 184 (263)
T PRK06181 166 I-----ELADDGVAVTVVCPGFVA 184 (263)
T ss_pred H-----HhhhcCceEEEEecCccc
Confidence 1 112356777778887664
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0025 Score=71.20 Aligned_cols=115 Identities=14% Similarity=0.121 Sum_probs=80.3
Q ss_pred CCeEEEEccCCCCCCCCCHHHHHHhc-------CCccEEEEcCccCCcc----c---CHHHHHHHHHHHHHHHHHHhH-h
Q psy13944 46 ERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNIVFHVAATVKFD----E---HFQTAFEINCKGTEKLLKMAE-E 110 (1217)
Q Consensus 46 ~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDiViH~AA~v~f~----e---~l~~a~~vNV~GT~~LLelAk-~ 110 (1217)
.++..+.+|++++ +++..++ ..+|+|||.|+..... . .++..+++|+.|...+...+. .
T Consensus 68 ~~~~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 141 (256)
T PRK12859 68 VKVSSMELDLTQN------DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARG 141 (256)
T ss_pred CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4678899999998 6665544 3479999999975321 1 244678999999888854442 2
Q ss_pred c--CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc
Q psy13944 111 M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM 188 (1217)
Q Consensus 111 ~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~ 188 (1217)
+ ..-.++|++||...... . .....|+.||+..+.+.+..+
T Consensus 142 ~~~~~~g~iv~isS~~~~~~----------~----------------------------~~~~~Y~~sK~a~~~l~~~la 183 (256)
T PRK12859 142 FDKKSGGRIINMTSGQFQGP----------M----------------------------VGELAYAATKGAIDALTSSLA 183 (256)
T ss_pred HhhcCCeEEEEEcccccCCC----------C----------------------------CCchHHHHHHHHHHHHHHHHH
Confidence 2 12348999999754211 0 011469999999999877654
Q ss_pred -----CCCCEEEEecceeccC
Q psy13944 189 -----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 189 -----~gLPvvIvRPsiV~G~ 204 (1217)
.++.+..++|+.+-.+
T Consensus 184 ~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 184 AEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred HHhhhhCeEEEEEEEccccCC
Confidence 5789999999877554
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0013 Score=73.89 Aligned_cols=118 Identities=13% Similarity=0.085 Sum_probs=79.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++.++.+|++++. +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++.+.+
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (270)
T PRK05650 49 GDGFYQRCDVRDYS------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPL 122 (270)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 46888999999853 344433 368999999996542 1334457889988888866654
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..++|++||..+.... + ....|+.||+..+.+..++
T Consensus 123 ~~~~-~~~~iv~vsS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l 163 (270)
T PRK05650 123 FKRQ-KSGRIVNIASMAGLMQG----------P----------------------------AMSSYNVAKAGVVALSETL 163 (270)
T ss_pred HHhC-CCCEEEEECChhhcCCC----------C----------------------------CchHHHHHHHHHHHHHHHH
Confidence 443 46789999997554320 0 0125999999877777665
Q ss_pred cccccccccccCCCceeEeccCccch
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
.+ +....++.+..++|.++-.
T Consensus 164 ~~-----e~~~~gi~v~~v~Pg~v~t 184 (270)
T PRK05650 164 LV-----ELADDEIGVHVVCPSFFQT 184 (270)
T ss_pred HH-----HhcccCcEEEEEecCcccc
Confidence 41 1224578888889988853
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0016 Score=74.71 Aligned_cols=117 Identities=21% Similarity=0.167 Sum_probs=82.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.++ ..+|+++|+|+... + .+.+...+++|+.|+.++++.+..
T Consensus 100 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 173 (294)
T PRK07985 100 RKAVLLPGDLSDEK------FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP 173 (294)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45788999999853 333332 35799999998532 1 234457889999999999998875
Q ss_pred c-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 614 M-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 614 ~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
. ..-.++|++||..++... | ....|+.||+..+.+++++.
T Consensus 174 ~m~~~g~iv~iSS~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la- 214 (294)
T PRK07985 174 LLPKGASIITTSSIQAYQPS----------P----------------------------HLLDYAATKAAILNYSRGLA- 214 (294)
T ss_pred hhhcCCEEEEECCchhccCC----------C----------------------------CcchhHHHHHHHHHHHHHHH-
Confidence 2 223589999997654321 0 01259999999999997764
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|.+|.
T Consensus 215 -----~el~~~gIrvn~i~PG~v~ 233 (294)
T PRK07985 215 -----KQVAEKGIRVNIVAPGPIW 233 (294)
T ss_pred -----HHHhHhCcEEEEEECCcCc
Confidence 222 357888888998885
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0011 Score=73.52 Aligned_cols=119 Identities=9% Similarity=0.085 Sum_probs=81.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (254)
T PRK08085 58 IKAHAAPFNVTHKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARY 131 (254)
T ss_pred CeEEEEecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35788999999864 344433 347999999996431 2345578899999999998877642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...... . .....|+.||+..|.+++++.
T Consensus 132 ~~~~~~~~iv~isS~~~~~~----------~----------------------------~~~~~Y~~sK~a~~~~~~~la 173 (254)
T PRK08085 132 MVKRQAGKIINICSMQSELG----------R----------------------------DTITPYAASKGAVKMLTRGMC 173 (254)
T ss_pred HHHcCCcEEEEEccchhccC----------C----------------------------CCCcchHHHHHHHHHHHHHHH
Confidence 23468999998643211 0 011259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccchh
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
.++ ..++.+..++|.++-..
T Consensus 174 ------~e~~~~gi~v~~v~pG~~~t~ 194 (254)
T PRK08085 174 ------VELARHNIQVNGIAPGYFKTE 194 (254)
T ss_pred ------HHHHhhCeEEEEEEeCCCCCc
Confidence 222 34777788888777543
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0019 Score=74.77 Aligned_cols=162 Identities=14% Similarity=0.072 Sum_probs=101.2
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh------------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD------------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~------------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
+||+.+.-|....++|.+..... ..+.+.+..+ ..++.++.+|+++. ++.+.++
T Consensus 19 ITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~--~~~v~~~~~Dl~d~------~sv~~~~~~~~~~ 90 (313)
T PRK05854 19 VTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVP--DAKLSLRALDLSSL------ASVAALGEQLRAE 90 (313)
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC--CCceEEEEecCCCH------HHHHHHHHHHHHh
Confidence 78888888889988888632211 1111221111 23688999999997 6665544
Q ss_pred -CCccEEEEcCccCCc------ccCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 72 -EDVNIVFHVAATVKF------DEHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f------~e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
..+|++||+||.... .+.++..+.+|+.|...+.+.+... .+-.++|++||..........+.
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~-------- 162 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDD-------- 162 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccc--------
Confidence 348999999997532 1346678999999988777766521 12358999999754321100000
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~ 205 (1217)
++.+ . ....-..|+.||++.+.+..+++ .++.+..+-||.|-...
T Consensus 163 ----------~~~~--~------~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 163 ----------LNWE--R------SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred ----------cccc--c------cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 0000 0 00011469999999998887653 36788889999886553
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0022 Score=70.49 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=95.6
Q ss_pred cccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
-+||+.+.-|....++|.+...+ +..+.++. .++.++.+|++++ ++++.++ .
T Consensus 6 lItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 73 (236)
T PRK06483 6 LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ------AGAQCIQADFSTN------AGIMAFIDELKQHTD 73 (236)
T ss_pred EEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH------cCCEEEEcCCCCH------HHHHHHHHHHHhhCC
Confidence 36888888888899888763221 11111111 2367899999987 5554433 3
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CC--CCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KN--LDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~--lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+|+.... .+.++..+++|+.|+..+.+.+... .+ -.++|++||...... .+
T Consensus 74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~----------~~ 143 (236)
T PRK06483 74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG----------SD 143 (236)
T ss_pred CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC----------CC
Confidence 58999999986421 1235578899999998877666542 11 347999988543110 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceec
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVM 202 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~ 202 (1217)
....|+.||+..|.+++.++ +++.+..++|+.+.
T Consensus 144 ----------------------------~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 144 ----------------------------KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred ----------------------------CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 01369999999999987765 46888889999773
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0014 Score=73.84 Aligned_cols=118 Identities=15% Similarity=0.080 Sum_probs=79.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc----------------------hhcHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF----------------------DEHFQTAFEI 599 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f----------------------~~~~~~~~~~ 599 (1217)
.++.++.+|++++. ++..++ ..+|+|||+|+.... .+.++..+++
T Consensus 59 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (278)
T PRK08277 59 GEALAVKADVLDKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDL 132 (278)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhh
Confidence 36889999999853 333332 368999999995321 2335578899
Q ss_pred HHHHHHHHHHHHHhc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChh
Q psy13944 600 NCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTY 676 (1217)
Q Consensus 600 NV~GT~nLLelA~~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtY 676 (1217)
|+.|+..+++.+... .+..++|++||...+... + ....|
T Consensus 133 n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~----------------------------~~~~Y 174 (278)
T PRK08277 133 NLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL----------T----------------------------KVPAY 174 (278)
T ss_pred hhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC----------C----------------------------CCchh
Confidence 999998776655421 134589999997654320 0 01259
Q ss_pred HHHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 677 TLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 677 t~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+.||+..|.+++++. ++-...++.+..+.|.+|.
T Consensus 175 ~~sK~a~~~l~~~la-----~e~~~~girvn~v~Pg~v~ 208 (278)
T PRK08277 175 SAAKAAISNFTQWLA-----VHFAKVGIRVNAIAPGFFL 208 (278)
T ss_pred HHHHHHHHHHHHHHH-----HHhCccCeEEEEEEeccCc
Confidence 999999999998764 1112346777788887774
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0011 Score=73.51 Aligned_cols=117 Identities=12% Similarity=0.098 Sum_probs=79.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+... + .+.++..+++|+.|+.++++.+...
T Consensus 50 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 123 (252)
T PRK07677 50 GQVLTVQMDVRNPE------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKY 123 (252)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHH
Confidence 46889999999854 344333 35799999998422 1 1234568899999999999988531
Q ss_pred ---CC-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+ ..++|++||.+..... .....|+.||+..+.++++.
T Consensus 124 ~~~~~~~g~ii~isS~~~~~~~--------------------------------------~~~~~Y~~sKaa~~~~~~~l 165 (252)
T PRK07677 124 WIEKGIKGNIINMVATYAWDAG--------------------------------------PGVIHSAAAKAGVLAMTRTL 165 (252)
T ss_pred HHhcCCCEEEEEEcChhhccCC--------------------------------------CCCcchHHHHHHHHHHHHHH
Confidence 12 3579999987542210 01125999999989888753
Q ss_pred ccccccccccc--CCCceeEeccCccc
Q psy13944 691 WGCARSREKCS--HDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~--~~l~~~i~rp~~v~ 715 (1217)
| ..++ .++.+..++|.+|.
T Consensus 166 ---a---~e~~~~~gi~v~~v~PG~v~ 186 (252)
T PRK07677 166 ---A---VEWGRKYGIRVNAIAPGPIE 186 (252)
T ss_pred ---H---HHhCcccCeEEEEEeecccc
Confidence 2 2232 37778888888775
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0027 Score=70.38 Aligned_cols=120 Identities=16% Similarity=0.158 Sum_probs=79.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc--------chhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK--------FDEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~--------f~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.++ .++|+|||+|+... ..+.++..+++|+.|+.++++.+..
T Consensus 46 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 119 (248)
T PRK10538 46 DNLYIAQLDVRNRA------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119 (248)
T ss_pred cceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 36889999999853 333332 36899999998531 1233456789999997776666542
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..++|++||...... .+ ..+.|+.||+..|.+.+.+
T Consensus 120 ~~~~~~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~~~~~~~~~l 161 (248)
T PRK10538 120 GMVERNHGHIINIGSTAGSWP----------YA----------------------------GGNVYGATKAFVRQFSLNL 161 (248)
T ss_pred HHHhcCCcEEEEECCcccCCC----------CC----------------------------CCchhHHHHHHHHHHHHHH
Confidence 1 25678999999754211 00 0125999999999998765
Q ss_pred cccccccccccCCCceeEeccCccchh
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
. ++-...++.+..++|.++.+.
T Consensus 162 ~-----~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 162 R-----TDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred H-----HHhcCCCcEEEEEeCCeeccc
Confidence 3 111235677888899888533
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0021 Score=70.06 Aligned_cols=118 Identities=13% Similarity=0.005 Sum_probs=82.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhcCCCc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEMKNLD 618 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~~~lk 618 (1217)
.+++++.+|+++++ ++..+++ .+|++||+|+.... .+.+...+++|+.|+.+++++... .+..
T Consensus 45 ~~~~~~~~Dl~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g 117 (230)
T PRK07041 45 APVRTAALDITDEA------AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGG 117 (230)
T ss_pred CceEEEEccCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCe
Confidence 46889999999854 4555554 47999999986432 133457889999999999995543 3567
Q ss_pred EEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccc
Q psy13944 619 SFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSRE 698 (1217)
Q Consensus 619 ~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~ 698 (1217)
++|++||..++... | .-+.|+.||+..|.+++++. .
T Consensus 118 ~iv~~ss~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la------~ 153 (230)
T PRK07041 118 SLTFVSGFAAVRPS----------A----------------------------SGVLQGAINAALEALARGLA------L 153 (230)
T ss_pred EEEEECchhhcCCC----------C----------------------------cchHHHHHHHHHHHHHHHHH------H
Confidence 99999998665320 0 11359999999999987653 2
Q ss_pred cccCCCceeEeccCccchhh
Q psy13944 699 KCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 699 ~~~~~l~~~i~rp~~v~e~~ 718 (1217)
+++ ++.+..+.|.++...+
T Consensus 154 e~~-~irv~~i~pg~~~t~~ 172 (230)
T PRK07041 154 ELA-PVRVNTVSPGLVDTPL 172 (230)
T ss_pred Hhh-CceEEEEeecccccHH
Confidence 222 3566677787775443
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0018 Score=72.15 Aligned_cols=119 Identities=18% Similarity=0.173 Sum_probs=82.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++..+.+|+++++ +++.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 57 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (253)
T PRK08993 57 RRFLSLTADLRKID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKH 130 (253)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 35788999999853 344433 358999999996532 1345678999999999999887642
Q ss_pred --C-C-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 --K-N-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 --~-~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ + -.++|++||..++... + .-..|+.||+..|.+++++
T Consensus 131 ~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l 172 (253)
T PRK08993 131 FIAQGNGGKIINIASMLSFQGG----------I----------------------------RVPSYTASKSGVMGVTRLM 172 (253)
T ss_pred HHhCCCCeEEEEECchhhccCC----------C----------------------------CCcchHHHHHHHHHHHHHH
Confidence 1 1 2479999997654321 0 0015999999999999776
Q ss_pred cccccccccccCCCceeEeccCccch
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
. ++-...++.+..++|.++.-
T Consensus 173 a-----~e~~~~gi~v~~v~pG~v~T 193 (253)
T PRK08993 173 A-----NEWAKHNINVNAIAPGYMAT 193 (253)
T ss_pred H-----HHhhhhCeEEEEEeeCcccC
Confidence 4 11223577888888988853
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0011 Score=73.20 Aligned_cols=118 Identities=13% Similarity=0.094 Sum_probs=78.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+..
T Consensus 49 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (254)
T TIGR02415 49 GKAVAYKLDVSDKD------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQ 122 (254)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46889999999864 343332 357999999986432 133446789999999988877653
Q ss_pred ---cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 ---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+...++|++||...... .| ....|+.||+..|.+++.+
T Consensus 123 ~~~~~~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 164 (254)
T TIGR02415 123 FKKQGHGGKIINAASIAGHEG----------NP----------------------------ILSAYSSTKFAVRGLTQTA 164 (254)
T ss_pred HHhCCCCeEEEEecchhhcCC----------CC----------------------------CCcchHHHHHHHHHHHHHH
Confidence 112258999988643211 00 1135999999999999765
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++-...++.+..++|-++.
T Consensus 165 ~-----~~~~~~~i~v~~v~Pg~i~ 184 (254)
T TIGR02415 165 A-----QELAPKGITVNAYCPGIVK 184 (254)
T ss_pred H-----HHhcccCeEEEEEecCccc
Confidence 3 1111336777788887774
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0016 Score=71.49 Aligned_cols=121 Identities=19% Similarity=0.231 Sum_probs=80.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++.+ +++.+. ..+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (245)
T PRK12936 52 ERVKIFPANLSDRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHP 125 (245)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 46888999999854 344332 458999999996432 2345578899999999998877531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||....... | ....|+.||+..+.+++.+.
T Consensus 126 ~~~~~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sk~a~~~~~~~la 167 (245)
T PRK12936 126 MMRRRYGRIINITSVVGVTGN----------P----------------------------GQANYCASKAGMIGFSKSLA 167 (245)
T ss_pred HHHhCCCEEEEECCHHhCcCC----------C----------------------------CCcchHHHHHHHHHHHHHHH
Confidence 245689999996432210 0 01249999997777775543
Q ss_pred ccccccccccCCCceeEeccCccchhh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
+ +-...++.+..++|.++...+
T Consensus 168 ---~--~~~~~~i~v~~i~pg~~~t~~ 189 (245)
T PRK12936 168 ---Q--EIATRNVTVNCVAPGFIESAM 189 (245)
T ss_pred ---H--HhhHhCeEEEEEEECcCcCch
Confidence 1 112346888888998775443
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0026 Score=70.94 Aligned_cols=120 Identities=16% Similarity=0.142 Sum_probs=80.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+|+..... +.++..+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (263)
T PRK08226 54 HRCTAVVADVRDPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPE 127 (263)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 45788999999853 4444433 579999999964321 233457889999999999887641
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...... +.+ ....|+.||+..|.+++++.
T Consensus 128 ~~~~~~~~iv~isS~~~~~~---------~~~----------------------------~~~~Y~~sK~a~~~~~~~la 170 (263)
T PRK08226 128 MIARKDGRIVMMSSVTGDMV---------ADP----------------------------GETAYALTKAAIVGLTKSLA 170 (263)
T ss_pred HHhcCCcEEEEECcHHhccc---------CCC----------------------------CcchHHHHHHHHHHHHHHHH
Confidence 23458999998643211 000 01259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccchh
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
+.+ ..++.+..++|..+...
T Consensus 171 ------~~~~~~~i~v~~i~pg~v~t~ 191 (263)
T PRK08226 171 ------VEYAQSGIRVNAICPGYVRTP 191 (263)
T ss_pred ------HHhcccCcEEEEEecCcccCH
Confidence 222 34677777888777533
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0025 Score=70.28 Aligned_cols=120 Identities=10% Similarity=0.099 Sum_probs=79.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++..+.+|+++.+ +++.++ ..+|+|||+|+.... .+.+...+++|+.|+.++++.+...
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (246)
T PRK12938 53 FDFIASEGNVGDWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDG 126 (246)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45788899999854 343333 368999999996431 2334567899999988776655431
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||...... . .....|+.||+..|.++.++.
T Consensus 127 ~~~~~~~~iv~isS~~~~~~----------~----------------------------~~~~~y~~sK~a~~~~~~~l~ 168 (246)
T PRK12938 127 MVERGWGRIINISSVNGQKG----------Q----------------------------FGQTNYSTAKAGIHGFTMSLA 168 (246)
T ss_pred HHHcCCeEEEEEechhccCC----------C----------------------------CCChhHHHHHHHHHHHHHHHH
Confidence 24568999999753211 0 011359999999888887654
Q ss_pred ccccccccccCCCceeEeccCccchh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
+ +.-..++.+..++|.++...
T Consensus 169 ~-----~~~~~gi~v~~i~pg~~~t~ 189 (246)
T PRK12938 169 Q-----EVATKGVTVNTVSPGYIGTD 189 (246)
T ss_pred H-----HhhhhCeEEEEEEecccCCc
Confidence 1 11245788888888887543
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0017 Score=72.17 Aligned_cols=116 Identities=13% Similarity=0.027 Sum_probs=79.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 53 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (259)
T PRK12384 53 GMAYGFGADATSEQ------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRL 126 (259)
T ss_pred ceeEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 35889999999853 333333 357999999985431 1334567899999999888877542
Q ss_pred ---CC-CcEEEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 615 ---KN-LDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 615 ---~~-lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.+ -.++|++||... ++. + ....|+.||++.+.++++
T Consensus 127 l~~~~~~~~iv~~ss~~~~~~~-----------~----------------------------~~~~Y~~sKaa~~~l~~~ 167 (259)
T PRK12384 127 MIRDGIQGRIIQINSKSGKVGS-----------K----------------------------HNSGYSAAKFGGVGLTQS 167 (259)
T ss_pred HHhCCCCcEEEEecCcccccCC-----------C----------------------------CCchhHHHHHHHHHHHHH
Confidence 23 348999988542 211 0 113599999999999977
Q ss_pred hcccccccccccCCCceeEeccCcc
Q psy13944 690 FWGCARSREKCSHDRGVRVCRNHPV 714 (1217)
Q Consensus 690 y~~~a~~~~~~~~~l~~~i~rp~~v 714 (1217)
+.+ +-...++.+..++|.++
T Consensus 168 la~-----e~~~~gi~v~~v~pg~~ 187 (259)
T PRK12384 168 LAL-----DLAEYGITVHSLMLGNL 187 (259)
T ss_pred HHH-----HHHHcCcEEEEEecCCc
Confidence 641 11246788888999865
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.002 Score=70.66 Aligned_cols=120 Identities=10% Similarity=0.075 Sum_probs=80.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.+++..+
T Consensus 52 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (245)
T PRK12824 52 DQVRLKELDVTDTE------ECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAA 125 (245)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999854 333332 358999999986431 2334467889999999985544
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..+||++||...+... + . ...|+.||++.|.+++++
T Consensus 126 ~~~~-~~~~iv~iss~~~~~~~----------~---------------------------~-~~~Y~~sK~a~~~~~~~l 166 (245)
T PRK12824 126 MCEQ-GYGRIINISSVNGLKGQ----------F---------------------------G-QTNYSAAKAGMIGFTKAL 166 (245)
T ss_pred HHHh-CCeEEEEECChhhccCC----------C---------------------------C-ChHHHHHHHHHHHHHHHH
Confidence 443 45689999997554320 0 0 014999999988888776
Q ss_pred cccccccccccCCCceeEeccCccchhh
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
.+ +-...++.+.+++|..+.+.+
T Consensus 167 ~~-----~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 167 AS-----EGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred HH-----HHHHhCeEEEEEEEcccCCcc
Confidence 41 112346788888998876544
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0022 Score=70.83 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=83.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 125 (248)
T TIGR01832 52 RRFLSLTADLSDIE------AIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKH 125 (248)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46889999999864 333222 358999999996432 1344567889999999999988632
Q ss_pred ---CC-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+ -.++|++||..++... + ....|+.||++.+.+++++
T Consensus 126 ~~~~~~~g~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l 167 (248)
T TIGR01832 126 FLKQGRGGKIINIASMLSFQGG----------I----------------------------RVPSYTASKHGVAGLTKLL 167 (248)
T ss_pred HHhcCCCeEEEEEecHHhccCC----------C----------------------------CCchhHHHHHHHHHHHHHH
Confidence 12 3589999997655321 0 1125999999999999776
Q ss_pred cccccccccc-cCCCceeEeccCccchh
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
. +.+ ..++.+..++|.+|...
T Consensus 168 a------~e~~~~gi~v~~v~pg~v~t~ 189 (248)
T TIGR01832 168 A------NEWAAKGINVNAIAPGYMATN 189 (248)
T ss_pred H------HHhCccCcEEEEEEECcCcCc
Confidence 4 222 34788888899888533
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0027 Score=70.92 Aligned_cols=153 Identities=8% Similarity=0.061 Sum_probs=97.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCcc-c-CCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENAN-F-TERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~-~-~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
.=+||+.+.-|....++|.+.....+ .+.+.++... . ..++..+.+|++++ ++++.++
T Consensus 11 ~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~ 84 (265)
T PRK07062 11 AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDE------ADVAAFAAAVEAR 84 (265)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCH------HHHHHHHHHHHHh
Confidence 44889998899999999876322110 1111111111 1 13688899999998 6665443
Q ss_pred -CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 72 -EDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
..+|++||+|+.... . +.+...+++|+.|...+++.+.. + .+..++|++||....... |
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 154 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE----------P 154 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC----------C
Confidence 457999999997432 1 13557788999887777665532 1 234589999997543210 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.+|+..+.+.+..+ .|+.+..+.|+.|-.+
T Consensus 155 ----------------------------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 155 ----------------------------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred ----------------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 01259999998776665432 6799999999987654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00089 Score=73.46 Aligned_cols=143 Identities=10% Similarity=0.066 Sum_probs=95.0
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhHH----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----CccEEEEc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAFD----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE----DVNIVFHV 80 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vfd----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----~VDiViH~ 80 (1217)
.||+.+.-|....++|.+.-.+ .+.+ .+.+.... .++.++.+|++++ ++++.+++ .+|++||+
T Consensus 5 ItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~------~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 5 VTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE--LDVDAIVCDNTDP------ASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred EEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--ccCcEEecCCCCH------HHHHHHHHHHhhcCcEEEEC
Confidence 6788888888888888763222 1111 11110001 1367889999988 66665543 58999999
Q ss_pred CccC---------Cc---ccCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 81 AATV---------KF---DEHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 81 AA~v---------~f---~e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
|+.. .+ .+.++..+++|+.|+..+++++.. +..-.++|++||... + .
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~------------~-~------- 136 (223)
T PRK05884 77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP------------P-A------- 136 (223)
T ss_pred CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC------------C-C-------
Confidence 9742 11 133567899999999999998864 222258999988530 0 0
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceec
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVM 202 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~ 202 (1217)
-..|+.||+.-+.+.+..+ .++.+..+.|+.+-
T Consensus 137 ----------------------~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~ 174 (223)
T PRK05884 137 ----------------------GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSV 174 (223)
T ss_pred ----------------------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccC
Confidence 0369999999998886654 57888889988764
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0021 Score=70.34 Aligned_cols=118 Identities=15% Similarity=0.140 Sum_probs=78.2
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHh---cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHh-cCCCcE
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLR---EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-MKNLDS 619 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~---~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~-~~~lk~ 619 (1217)
+.++.+|+++++ .+..+. ..+|+|||+|+...+. +.++..+++|+.|+.+++..+.. ++.-.+
T Consensus 53 ~~~~~~D~~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~ 126 (237)
T PRK12742 53 ATAVQTDSADRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGR 126 (237)
T ss_pred CeEEecCCCCHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCe
Confidence 467889998753 333333 3589999999864321 23457889999999999755543 333458
Q ss_pred EEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccccc
Q psy13944 620 FIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREK 699 (1217)
Q Consensus 620 fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~ 699 (1217)
+|++||...... +. .....|+.||+..|.+++++. ++-
T Consensus 127 iv~isS~~~~~~---------~~----------------------------~~~~~Y~~sKaa~~~~~~~la-----~~~ 164 (237)
T PRK12742 127 IIIIGSVNGDRM---------PV----------------------------AGMAAYAASKSALQGMARGLA-----RDF 164 (237)
T ss_pred EEEEeccccccC---------CC----------------------------CCCcchHHhHHHHHHHHHHHH-----HHH
Confidence 999999653110 00 011359999999999997754 112
Q ss_pred ccCCCceeEeccCccch
Q psy13944 700 CSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 700 ~~~~l~~~i~rp~~v~e 716 (1217)
...++.+..++|.++..
T Consensus 165 ~~~gi~v~~v~Pg~~~t 181 (237)
T PRK12742 165 GPRGITINVVQPGPIDT 181 (237)
T ss_pred hhhCeEEEEEecCcccC
Confidence 24568888889988853
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0016 Score=72.17 Aligned_cols=117 Identities=16% Similarity=0.174 Sum_probs=78.7
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-----h---hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-----~---~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
++.++..|+++.+ +.+.++ ..+|+|+|+|+.... + +.++..+++|+.|+..+++.+...
T Consensus 58 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (252)
T PRK07035 58 KAEALACHIGEME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKL 131 (252)
T ss_pred eEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4778899999854 333332 358999999985321 1 234467889999999888776421
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+++++||.+.... .+ .-..|+.||++.|.+++++.
T Consensus 132 ~~~~~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~al~~~~~~l~ 173 (252)
T PRK07035 132 MKEQGGGSIVNVASVNGVSP----------GD----------------------------FQGIYSITKAAVISMTKAFA 173 (252)
T ss_pred HHhCCCcEEEEECchhhcCC----------CC----------------------------CCcchHHHHHHHHHHHHHHH
Confidence 24568999998643221 00 11259999999999998875
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+..+.|-+|.
T Consensus 174 -----~e~~~~gi~v~~i~PG~v~ 192 (252)
T PRK07035 174 -----KECAPFGIRVNALLPGLTD 192 (252)
T ss_pred -----HHHhhcCEEEEEEeecccc
Confidence 2223457788888887774
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0025 Score=70.86 Aligned_cols=120 Identities=13% Similarity=0.054 Sum_probs=82.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---ch---hcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---FD---EHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f~---~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+... +. +.++..+++|+.|+.++++.+...
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 128 (258)
T PRK08628 55 PRAEFVQVDLTDDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHL 128 (258)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 46889999999864 344433 36899999999532 22 445578899999999999888642
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
.+..+||++||...... .+ ....|+.||+..|.+++++.+
T Consensus 129 ~~~~~~iv~~ss~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l~~- 169 (258)
T PRK08628 129 KASRGAIVNISSKTALTG----------QG----------------------------GTSGYAAAKGAQLALTREWAV- 169 (258)
T ss_pred hccCcEEEEECCHHhccC----------CC----------------------------CCchhHHHHHHHHHHHHHHHH-
Confidence 12357999999654321 00 112599999999999977641
Q ss_pred ccccccccCCCceeEeccCccchh
Q psy13944 694 ARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
+-...++.+..++|..|-..
T Consensus 170 ----e~~~~~i~v~~v~pg~v~t~ 189 (258)
T PRK08628 170 ----ALAKDGVRVNAVIPAEVMTP 189 (258)
T ss_pred ----HHhhcCeEEEEEecCccCCH
Confidence 11245788888899888543
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0011 Score=72.73 Aligned_cols=119 Identities=17% Similarity=0.088 Sum_probs=79.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+..
T Consensus 51 ~~~~~~~~D~~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (247)
T PRK09730 51 GKAFVLQADISDEN------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK 124 (247)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 35788999999864 3444433 46899999996421 123446789999999988876654
Q ss_pred c------CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 614 M------KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 614 ~------~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
. .+-.+||++||...... .| .....|+.||+..|.++
T Consensus 125 ~~~~~~~~~~g~~v~~sS~~~~~~----------~~---------------------------~~~~~Y~~sK~~~~~~~ 167 (247)
T PRK09730 125 RMALKHGGSGGAIVNVSSAASRLG----------AP---------------------------GEYVDYAASKGAIDTLT 167 (247)
T ss_pred HHHhcCCCCCcEEEEECchhhccC----------CC---------------------------CcccchHhHHHHHHHHH
Confidence 2 01246999999754321 00 00124999999999998
Q ss_pred hhhcccccccccccCCCceeEeccCccc
Q psy13944 688 LSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 688 ~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+++.. +-...++.+..++|..+.
T Consensus 168 ~~l~~-----~~~~~~i~v~~i~pg~~~ 190 (247)
T PRK09730 168 TGLSL-----EVAAQGIRVNCVRPGFIY 190 (247)
T ss_pred HHHHH-----HHHHhCeEEEEEEeCCCc
Confidence 76541 112457888889998885
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.002 Score=72.97 Aligned_cols=119 Identities=13% Similarity=0.126 Sum_probs=77.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ ++..+++ .+|+|||+||... + .+.++..+++|+.|+.++++.+..
T Consensus 55 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~ 128 (275)
T PRK05876 55 FDVHGVMCDVRHRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPR 128 (275)
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 35888999999854 4444433 4799999999642 1 133446789999999999988752
Q ss_pred ---cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 ---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+.-.++|++||...+.. .| ....|+.||+..+.+..+.
T Consensus 129 m~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~l 170 (275)
T PRK05876 129 LLEQGTGGHVVFTASFAGLVP----------NA----------------------------GLGAYGVAKYGVVGLAETL 170 (275)
T ss_pred HHhcCCCCEEEEeCChhhccC----------CC----------------------------CCchHHHHHHHHHHHHHHH
Confidence 211357999999765432 00 1135999999744444332
Q ss_pred cccccccccccCCCceeEeccCccch
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
. ++-...++.+.+++|.++..
T Consensus 171 ~-----~e~~~~gi~v~~v~Pg~v~t 191 (275)
T PRK05876 171 A-----REVTADGIGVSVLCPMVVET 191 (275)
T ss_pred H-----HHhhhcCcEEEEEEeCcccc
Confidence 2 01113478888888988753
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0029 Score=70.31 Aligned_cols=117 Identities=15% Similarity=0.082 Sum_probs=79.0
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
++.++.+|+++++ .+..++ .++|+|||+||.... .+.+...+++|+.|+.++++.+...
T Consensus 59 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 132 (264)
T PRK12829 59 KVTATVADVADPA------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPL 132 (264)
T ss_pred ceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 5789999999854 333332 468999999997511 2334578899999999999987431
Q ss_pred ---CCC-cEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KNL-DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+. +.|+++||...... .| ....|+.+|+..|.+++++
T Consensus 133 ~~~~~~~~~vv~~ss~~~~~~----------~~----------------------------~~~~y~~~K~a~~~~~~~l 174 (264)
T PRK12829 133 LKASGHGGVIIALSSVAGRLG----------YP----------------------------GRTPYAASKWAVVGLVKSL 174 (264)
T ss_pred HHhCCCCeEEEEecccccccC----------CC----------------------------CCchhHHHHHHHHHHHHHH
Confidence 133 56888877543211 00 0124999999999999775
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+ +.-..++.+.++||..+.
T Consensus 175 ~~-----~~~~~~i~~~~l~pg~v~ 194 (264)
T PRK12829 175 AI-----ELGPLGIRVNAILPGIVR 194 (264)
T ss_pred HH-----HHhhcCeEEEEEecCCcC
Confidence 41 111357888899998884
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0017 Score=71.62 Aligned_cols=118 Identities=19% Similarity=0.177 Sum_probs=78.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-----h---hcHHHHHHHHHHHHHHHHHH-HH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKM-AE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-----~---~~~~~~~~~NV~GT~nLLel-A~ 612 (1217)
.++.++.+|++++. +++.++ ..+|+|||+|+.... + +.+...+++|+.|+..+++. +.
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06947 52 GRACVVAGDVANEA------DVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR 125 (248)
T ss_pred CcEEEEEeccCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46889999999864 333322 368999999995421 1 22345788999999998754 43
Q ss_pred hcCC-----CcEEEEEccceee-cCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHH
Q psy13944 613 EMKN-----LDSFIYVSTAYSN-CNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYII 686 (1217)
Q Consensus 613 ~~~~-----lk~fV~vSTa~v~-g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~l 686 (1217)
.+.. -.+||++||.... +. + +. ...|+.||+..+.+
T Consensus 126 ~~~~~~~~~~~~ii~~sS~~~~~~~-----------~--------------------------~~-~~~Y~~sK~~~~~~ 167 (248)
T PRK06947 126 RLSTDRGGRGGAIVNVSSIASRLGS-----------P--------------------------NE-YVDYAGSKGAVDTL 167 (248)
T ss_pred HHHhcCCCCCcEEEEECchhhcCCC-----------C--------------------------CC-CcccHhhHHHHHHH
Confidence 3311 1259999986432 21 0 00 12499999999999
Q ss_pred hhhhcccccccccccCCCceeEeccCccc
Q psy13944 687 CLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 687 v~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++++.+ +-..+++.+..++|..|-
T Consensus 168 ~~~la~-----~~~~~~i~v~~i~Pg~v~ 191 (248)
T PRK06947 168 TLGLAK-----ELGPHGVRVNAVRPGLIE 191 (248)
T ss_pred HHHHHH-----HhhhhCcEEEEEeccCcc
Confidence 977641 112457889999998885
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0015 Score=66.85 Aligned_cols=113 Identities=13% Similarity=0.135 Sum_probs=78.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++. +++.++ ..+|+|||+|+..... +.++..+++|+.|+.++++.+++.
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (180)
T smart00822 53 AEVTVVACDVADRA------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL 126 (180)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC
Confidence 46888999998753 344332 3469999999964321 334567889999999999999775
Q ss_pred CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccc
Q psy13944 615 KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCA 694 (1217)
Q Consensus 615 ~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a 694 (1217)
+.++++++||....-. .+ ....|+.||...+.+++..
T Consensus 127 -~~~~ii~~ss~~~~~~----------~~----------------------------~~~~y~~sk~~~~~~~~~~---- 163 (180)
T smart00822 127 -PLDFFVLFSSVAGVLG----------NP----------------------------GQANYAAANAFLDALAAHR---- 163 (180)
T ss_pred -CcceEEEEccHHHhcC----------CC----------------------------CchhhHHHHHHHHHHHHHH----
Confidence 6778999988643211 00 0125999999999998432
Q ss_pred cccccccCCCceeEeccCccc
Q psy13944 695 RSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 695 ~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
..+++++..++|.++.
T Consensus 164 -----~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 164 -----RARGLPATSINWGAWA 179 (180)
T ss_pred -----HhcCCceEEEeecccc
Confidence 2456777777776653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0017 Score=71.98 Aligned_cols=141 Identities=13% Similarity=0.090 Sum_probs=85.1
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhc----CccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEccc
Q psy13944 552 VVLTADLQSDGLGLDEKAKEVLRE----DVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTA 626 (1217)
Q Consensus 552 ~~V~GDltd~~LGLs~~~~~~L~~----~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~-~~lk~fV~vSTa 626 (1217)
.++.+|+++.+ +++.+++ .+|+|||+||... ..+++..+++|+.|+..+++++... .+-.++|++||.
T Consensus 26 ~~~~~Dl~~~~------~v~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~ 98 (241)
T PRK12428 26 GFIQADLGDPA------SIDAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASL 98 (241)
T ss_pred HhhcccCCCHH------HHHHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcH
Confidence 35789998753 4555543 5899999999754 3567788999999999999998753 222589999998
Q ss_pred eeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccc-cCC
Q psy13944 627 YSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKC-SHD 703 (1217)
Q Consensus 627 ~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~-~~~ 703 (1217)
.+++... +..|...... +.+..-.............|+.||+..|.+.+++.. ..+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~-----~e~~~~g 160 (241)
T PRK12428 99 AGAEWPQRLELHKALAATA-------------SFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQ-----PWFGARG 160 (241)
T ss_pred HhhccccchHHHHhhhccc-------------hHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHH-----HhhhccC
Confidence 7765311 1111111000 000000000000011225799999999988866430 112 346
Q ss_pred CceeEeccCccchh
Q psy13944 704 RGVRVCRNHPVGET 717 (1217)
Q Consensus 704 l~~~i~rp~~v~e~ 717 (1217)
+.+..+.|..|...
T Consensus 161 irvn~v~PG~v~T~ 174 (241)
T PRK12428 161 IRVNCVAPGPVFTP 174 (241)
T ss_pred eEEEEeecCCccCc
Confidence 77888888877543
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0015 Score=72.51 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=80.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++..+.+|+++++ +++.++ ..+|+|||+|+... + .+.++..+++|+.|+..+++.+..
T Consensus 56 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (253)
T PRK06172 56 GEALFVACDVTRDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIP 129 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999853 344433 35699999999632 1 134456788999999887765432
Q ss_pred -c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 -M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 -~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ .+..++|++||...+... + ....|+.||+..|.+++++
T Consensus 130 ~~~~~~~~~ii~~sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l 171 (253)
T PRK06172 130 LMLAQGGGAIVNTASVAGLGAA----------P----------------------------KMSIYAASKHAVIGLTKSA 171 (253)
T ss_pred HHHhcCCcEEEEECchhhccCC----------C----------------------------CCchhHHHHHHHHHHHHHH
Confidence 1 134689999997554321 0 0125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccchhh
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e~~ 718 (1217)
. .++ ..++.+..+.|-+|...+
T Consensus 172 a------~e~~~~~i~v~~i~PG~v~t~~ 194 (253)
T PRK06172 172 A------IEYAKKGIRVNAVCPAVIDTDM 194 (253)
T ss_pred H------HHhcccCeEEEEEEeCCccChh
Confidence 4 223 346888888888875433
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.003 Score=70.42 Aligned_cols=120 Identities=12% Similarity=0.148 Sum_probs=82.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|++||+|+...+ .+.++..+++|+.|+.++++.+...
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (260)
T PRK07063 58 ARVLAVPADVTDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPG 131 (260)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46889999999854 344443 368999999996432 2345577889999999998887531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||....... | ....|+.||+..+.+++++.
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~la 173 (260)
T PRK07063 132 MVERGRGSIVNIASTHAFKII----------P----------------------------GCFPYPVAKHGLLGLTRALG 173 (260)
T ss_pred HHhhCCeEEEEECChhhccCC----------C----------------------------CchHHHHHHHHHHHHHHHHH
Confidence 234589999997543210 0 01249999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccchhh
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e~~ 718 (1217)
.++ ..++.+..++|-+|...+
T Consensus 174 ------~el~~~gIrvn~v~PG~v~t~~ 195 (260)
T PRK07063 174 ------IEYAARNVRVNAIAPGYIETQL 195 (260)
T ss_pred ------HHhCccCeEEEEEeeCCccChh
Confidence 223 346778888898876443
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0016 Score=80.85 Aligned_cols=117 Identities=17% Similarity=0.116 Sum_probs=81.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
++.++.+|+++++ +++++++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 365 ~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 438 (582)
T PRK05855 365 VAHAYRVDVSDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQM 438 (582)
T ss_pred eEEEEEcCCCCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5889999999864 3444433 48999999997532 2344567889999999998876431
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+.-.++|++||..++... + .-..|+.||+..|.++.++.
T Consensus 439 ~~~~~~g~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l~ 480 (582)
T PRK05855 439 VERGTGGHIVNVASAAAYAPS----------R----------------------------SLPAYATSKAAVLMLSECLR 480 (582)
T ss_pred HhcCCCcEEEEECChhhccCC----------C----------------------------CCcHHHHHHHHHHHHHHHHH
Confidence 112489999998765431 0 01259999999998887653
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+..+.|.+|.
T Consensus 481 -----~e~~~~gi~v~~v~Pg~v~ 499 (582)
T PRK05855 481 -----AELAAAGIGVTAICPGFVD 499 (582)
T ss_pred -----HHhcccCcEEEEEEeCCCc
Confidence 1122457888888888875
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0014 Score=73.18 Aligned_cols=152 Identities=13% Similarity=0.052 Sum_probs=97.6
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh---------HHHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA---------FDRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v---------fd~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
=+||+.+.-|....++|.+.....+ .+.+.++. .....++.++.+|++++ ++++.+++
T Consensus 12 lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 85 (260)
T PRK08416 12 VISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP------ETYKELFKKIDEDF 85 (260)
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHhc
Confidence 3789998899999999987322211 11111111 11234788999999998 66655443
Q ss_pred -CccEEEEcCccCC---------cc----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCccccccccccccc
Q psy13944 73 -DVNIVFHVAATVK---------FD----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 73 -~VDiViH~AA~v~---------f~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
.+|++||+|+... +. +.+...+++|+.+...+.+.+.. + .+-.++|++||......
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------- 158 (260)
T PRK08416 86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY------- 158 (260)
T ss_pred CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC-------
Confidence 5799999997531 11 12346788888887766555432 1 23358999999643111
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.| ....|+.||+..+.+++.++ .++.+..+.|+.+-.+
T Consensus 159 ---~~----------------------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~ 201 (260)
T PRK08416 159 ---IE----------------------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTD 201 (260)
T ss_pred ---CC----------------------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCh
Confidence 00 01369999999999987765 4789999999876444
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.002 Score=78.23 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=98.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-HH------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-FD------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-fd------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
.-+||+.+.-|....++|.+.....+ .+ .+.+.... -+...+.+|++++ ++++.+++ .
T Consensus 213 vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 213 ALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR--VGGTALALDITAP------DAPARIAEHLAERHGG 284 (450)
T ss_pred EEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH--cCCeEEEEeCCCH------HHHHHHHHHHHHhCCC
Confidence 44788888888888888876322211 11 11111001 1245788999987 65555443 5
Q ss_pred ccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|+|||+|+.... .+.++..+++|+.|+.++++.+... ..-.+||++||....... +
T Consensus 285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~----------~--- 351 (450)
T PRK08261 285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN----------R--- 351 (450)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC----------C---
Confidence 7999999997532 1335578899999999999998752 122689999997542210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
....|+.+|+..+.++..+. .++++..+.|+.+-.
T Consensus 352 -------------------------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t 391 (450)
T PRK08261 352 -------------------------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIET 391 (450)
T ss_pred -------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence 01359999997776665543 589999999987643
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0025 Score=69.88 Aligned_cols=119 Identities=18% Similarity=0.236 Sum_probs=80.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (247)
T PRK05565 55 GDAIAVKADVSSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPY 128 (247)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999864 3433332 78999999997532 1234567889999999998887642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||....... + ....|+.||+..+.++.++.
T Consensus 129 ~~~~~~~~~v~~sS~~~~~~~----------~----------------------------~~~~y~~sK~a~~~~~~~~~ 170 (247)
T PRK05565 129 MIKRKSGVIVNISSIWGLIGA----------S----------------------------CEVLYSASKGAVNAFTKALA 170 (247)
T ss_pred HHhcCCcEEEEECCHhhccCC----------C----------------------------CccHHHHHHHHHHHHHHHHH
Confidence 134679999986543210 0 01149999998888887654
Q ss_pred ccccccccccCCCceeEeccCccch
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+ +....++.+..++|..|-.
T Consensus 171 ~-----~~~~~gi~~~~v~pg~v~t 190 (247)
T PRK05565 171 K-----ELAPSGIRVNAVAPGAIDT 190 (247)
T ss_pred H-----HHHHcCeEEEEEEECCccC
Confidence 1 1124578888888877743
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0051 Score=68.96 Aligned_cols=63 Identities=16% Similarity=0.189 Sum_probs=47.3
Q ss_pred CccEEEEcCccc----cchhcHH-HHHHHHHHHHHHHHHHHHhcC-CCcEEEEEccceeecCcc--ccccc
Q psy13944 576 DVNIVFHVAATV----KFDEHFQ-TAFEINCKGTEKLLKMAEEMK-NLDSFIYVSTAYSNCNIK--KIEEK 638 (1217)
Q Consensus 576 ~vdvVfH~AA~v----~f~~~~~-~~~~~NV~GT~nLLelA~~~~-~lk~fV~vSTa~v~g~~~--~I~E~ 638 (1217)
++|+|||+|+.. ++++..+ ...+.=+.+|..|.++..++. +.+.|+-.|.+.-||+.. .++|.
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~ 126 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEE 126 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecC
Confidence 799999999953 3555555 567788999999999988552 456777777777788765 45665
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0027 Score=71.98 Aligned_cols=145 Identities=12% Similarity=0.057 Sum_probs=82.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh------cCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCcEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR------EDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFI 621 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~------~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~-~~lk~fV 621 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+||.......+...+++|+.|+.++++.+... ..-.++|
T Consensus 49 ~~~~~~~~Dv~d~~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv 122 (275)
T PRK06940 49 FDVSTQEVDVSSRE------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGV 122 (275)
T ss_pred CeEEEEEeecCCHH------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEE
Confidence 36889999999864 343333 3589999999976555677789999999999999988753 1113456
Q ss_pred EEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhh---hhccCCCCChhHHHHHHHHHHhhhhcccccccc
Q psy13944 622 YVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLN---DILIKPMPNTYTLSKNAWYIICLSFWGCARSRE 698 (1217)
Q Consensus 622 ~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~---~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~ 698 (1217)
.+||...........+.. . +....+...+..+. +.-.......|+.||+.-+.++++.. ++
T Consensus 123 ~isS~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la-----~e 186 (275)
T PRK06940 123 VIASQSGHRLPALTAEQE--R---------ALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEA-----VK 186 (275)
T ss_pred EEEecccccCcccchhhh--c---------cccccccccccccccccccccCCccchhHHHHHHHHHHHHHHH-----HH
Confidence 777654321110000000 0 00000000000000 00000112479999999888886643 12
Q ss_pred cccCCCceeEeccCccc
Q psy13944 699 KCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 699 ~~~~~l~~~i~rp~~v~ 715 (1217)
-...++.+..+.|-+|.
T Consensus 187 ~~~~gIrvn~i~PG~v~ 203 (275)
T PRK06940 187 WGERGARINSISPGIIS 203 (275)
T ss_pred HccCCeEEEEeccCcCc
Confidence 22346777777787664
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0026 Score=71.23 Aligned_cols=119 Identities=11% Similarity=0.116 Sum_probs=81.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++. +++.++ ..+|+|||+||.... .+.+...+++|+.|+..+++.+...
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (265)
T PRK07097 59 IEAHGYVCDVTDED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPS 132 (265)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 36889999999854 344443 347999999997532 2334467889999999888777531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||...... . .....|+.||+..+.++.++.
T Consensus 133 ~~~~~~g~iv~isS~~~~~~----------~----------------------------~~~~~Y~~sKaal~~l~~~la 174 (265)
T PRK07097 133 MIKKGHGKIINICSMMSELG----------R----------------------------ETVSAYAAAKGGLKMLTKNIA 174 (265)
T ss_pred HHhcCCcEEEEEcCccccCC----------C----------------------------CCCccHHHHHHHHHHHHHHHH
Confidence 13568999998643211 0 011359999999999998765
Q ss_pred ccccccccc-cCCCceeEeccCccchh
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
+++ ..++.+..++|..|...
T Consensus 175 ------~e~~~~gi~v~~v~Pg~v~t~ 195 (265)
T PRK07097 175 ------SEYGEANIQCNGIGPGYIATP 195 (265)
T ss_pred ------HHhhhcCceEEEEEecccccc
Confidence 222 34688888889888644
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.004 Score=68.21 Aligned_cols=117 Identities=11% Similarity=0.099 Sum_probs=77.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++.++.+|++++. +++.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+
T Consensus 50 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 123 (242)
T TIGR01829 50 FDFRVVEGDVSSFE------SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDG 123 (242)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999853 333332 458999999986431 1234467889999988865554
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..++|++||....... + ....|+.||+..+.+++++
T Consensus 124 ~~~~-~~~~iv~iss~~~~~~~----------~----------------------------~~~~y~~sk~a~~~~~~~l 164 (242)
T TIGR01829 124 MRER-GWGRIINISSVNGQKGQ----------F----------------------------GQTNYSAAKAGMIGFTKAL 164 (242)
T ss_pred HHhc-CCcEEEEEcchhhcCCC----------C----------------------------CcchhHHHHHHHHHHHHHH
Confidence 333 45789999996432110 0 0125999999888888765
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++....++.+..++|-.+.
T Consensus 165 a-----~~~~~~~i~v~~i~pg~~~ 184 (242)
T TIGR01829 165 A-----QEGATKGVTVNTISPGYIA 184 (242)
T ss_pred H-----HHhhhhCeEEEEEeeCCCc
Confidence 3 1122457888888887775
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0031 Score=69.54 Aligned_cols=117 Identities=14% Similarity=0.108 Sum_probs=76.6
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHH----HHHHHHHHHH
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCK----GTEKLLKMAE 612 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~----GT~nLLelA~ 612 (1217)
+..+.+|+++++ .++.++ ..+|+|||+|+..... +.+...+++|+. +++.+++.++
T Consensus 53 ~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (251)
T PRK07069 53 AFAAVQDVTDEA------QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLR 126 (251)
T ss_pred EEEEEeecCCHH------HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 556889999854 343333 3579999999975422 223457788888 7788888887
Q ss_pred hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 613 EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 613 ~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
+. +..+||++||...+... + ....|+.||+..+.+++++..
T Consensus 127 ~~-~~~~ii~~ss~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~ 167 (251)
T PRK07069 127 AS-QPASIVNISSVAAFKAE----------P----------------------------DYTAYNASKAAVASLTKSIAL 167 (251)
T ss_pred hc-CCcEEEEecChhhccCC----------C----------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 65 56799999997654321 0 012599999999999977541
Q ss_pred cccccccccCCCceeEeccCccc
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.. ...+.++.+..++|..|-
T Consensus 168 e~---~~~~~~i~v~~v~pg~v~ 187 (251)
T PRK07069 168 DC---ARRGLDVRCNSIHPTFIR 187 (251)
T ss_pred Hh---cccCCcEEEEEEeecccC
Confidence 11 112334666677776663
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.003 Score=70.14 Aligned_cols=117 Identities=10% Similarity=0.081 Sum_probs=79.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..+++ .+|+|||+|+..... +.+...+.+|+.|+.++++.+...
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (257)
T PRK07074 49 ARFVPVACDLTDAA------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEG 122 (257)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36889999999854 4443333 479999999864321 223356779999999999888431
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||...... +. . ..|+.||+..|.+++++.
T Consensus 123 ~~~~~~~~iv~~sS~~~~~~--------~~------------------------------~-~~y~~sK~a~~~~~~~~a 163 (257)
T PRK07074 123 MLKRSRGAVVNIGSVNGMAA--------LG------------------------------H-PAYSAAKAGLIHYTKLLA 163 (257)
T ss_pred HHHcCCeEEEEEcchhhcCC--------CC------------------------------C-cccHHHHHHHHHHHHHHH
Confidence 23468999999643211 00 0 149999999999998875
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+ +....++.+..++|..+-
T Consensus 164 ~-----~~~~~gi~v~~v~pg~v~ 182 (257)
T PRK07074 164 V-----EYGRFGIRANAVAPGTVK 182 (257)
T ss_pred H-----HHhHhCeEEEEEEeCcCC
Confidence 1 112346778888887764
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.002 Score=72.31 Aligned_cols=118 Identities=19% Similarity=0.123 Sum_probs=78.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+... + .+.+...+++|+.|+.++++.+...
T Consensus 58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 131 (264)
T PRK07576 58 PEGLGVSADVRDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPL 131 (264)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35788999999853 344443 34799999997432 1 2334467889999999999888642
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
+.-.++|++||...... .| ....|+.||+..|.++++..
T Consensus 132 l~~~~g~iv~iss~~~~~~----------~~----------------------------~~~~Y~asK~a~~~l~~~la- 172 (264)
T PRK07576 132 LRRPGASIIQISAPQAFVP----------MP----------------------------MQAHVCAAKAGVDMLTRTLA- 172 (264)
T ss_pred HHhCCCEEEEECChhhccC----------CC----------------------------CccHHHHHHHHHHHHHHHHH-
Confidence 11248999999654211 00 11259999999999997653
Q ss_pred cccccccccCCCceeEeccCccc
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+-...++.+..++|.++.
T Consensus 173 ----~e~~~~gi~v~~v~pg~~~ 191 (264)
T PRK07576 173 ----LEWGPEGIRVNSIVPGPIA 191 (264)
T ss_pred ----HHhhhcCeEEEEEeccccc
Confidence 1112356778888888774
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0047 Score=66.97 Aligned_cols=114 Identities=14% Similarity=0.159 Sum_probs=74.0
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccch-------hcHHHHHHHHHHHH----HHHHHHHHhcC
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKFD-------EHFQTAFEINCKGT----EKLLKMAEEMK 615 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT----~nLLelA~~~~ 615 (1217)
.++++.+|+++++ +++.+++ ++|+|||+|+..... +.+...+++|+.|+ .++++.+++.
T Consensus 48 ~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~- 120 (227)
T PRK08219 48 GATPFPVDLTDPE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA- 120 (227)
T ss_pred cceEEecCCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-
Confidence 4788999999853 5665555 589999999964321 22445678899994 4455544443
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
..++|++||..+++... ....|+.+|+..|.++..+.
T Consensus 121 -~~~~v~~ss~~~~~~~~--------------------------------------~~~~y~~~K~a~~~~~~~~~---- 157 (227)
T PRK08219 121 -HGHVVFINSGAGLRANP--------------------------------------GWGSYAASKFALRALADALR---- 157 (227)
T ss_pred -CCeEEEEcchHhcCcCC--------------------------------------CCchHHHHHHHHHHHHHHHH----
Confidence 46899999976543210 01249999999998887653
Q ss_pred ccccccCCCceeEeccCccc
Q psy13944 696 SREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 696 ~~~~~~~~l~~~i~rp~~v~ 715 (1217)
......+.+..++|.++.
T Consensus 158 --~~~~~~i~~~~i~pg~~~ 175 (227)
T PRK08219 158 --EEEPGNVRVTSVHPGRTD 175 (227)
T ss_pred --HHhcCCceEEEEecCCcc
Confidence 111222666666776654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0029 Score=70.15 Aligned_cols=117 Identities=13% Similarity=0.069 Sum_probs=79.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+. ..+|+|||+|+..... +.++..+++|+.|+.++++.+...
T Consensus 61 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (255)
T PRK06841 61 GNAKGLVCDVSDSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRH 134 (255)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHH
Confidence 34678999999853 344433 3579999999965421 234467899999999999998642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||...... .+ ....|+.||+..|.+++++.
T Consensus 135 ~~~~~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la 176 (255)
T PRK06841 135 MIAAGGGKIVNLASQAGVVA----------LE----------------------------RHVAYCASKAGVVGMTKVLA 176 (255)
T ss_pred HHhcCCceEEEEcchhhccC----------CC----------------------------CCchHHHHHHHHHHHHHHHH
Confidence 23568999999643211 00 01259999999999987754
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..++|-+|-
T Consensus 177 ------~e~~~~gi~v~~v~pg~v~ 195 (255)
T PRK06841 177 ------LEWGPYGITVNAISPTVVL 195 (255)
T ss_pred ------HHHHhhCeEEEEEEeCcCc
Confidence 222 346777777777664
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0038 Score=68.03 Aligned_cols=117 Identities=11% Similarity=0.055 Sum_probs=79.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++++.+|+++.. +++.+. .++|+|||+|+.... .+.+...+++|+.|+.++++.+.+.
T Consensus 55 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 128 (239)
T PRK12828 55 ALRIGGIDLVDPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPAL 128 (239)
T ss_pred CceEEEeecCCHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHH
Confidence 3667889998853 344333 368999999985431 2234467889999999999888531
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+.++||++||..+++.. + .-..|+.+|+..|.+++++.+
T Consensus 129 ~~~~~~~iv~~sS~~~~~~~----------~----------------------------~~~~y~~sk~a~~~~~~~~a~ 170 (239)
T PRK12828 129 TASGGGRIVNIGAGAALKAG----------P----------------------------GMGAYAAAKAGVARLTEALAA 170 (239)
T ss_pred HhcCCCEEEEECchHhccCC----------C----------------------------CcchhHHHHHHHHHHHHHHHH
Confidence 257799999998655321 0 012499999998888866531
Q ss_pred cccccccccCCCceeEeccCccc
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+....++.+..++|..|-
T Consensus 171 -----~~~~~~i~~~~i~pg~v~ 188 (239)
T PRK12828 171 -----ELLDRGITVNAVLPSIID 188 (239)
T ss_pred -----HhhhcCeEEEEEecCccc
Confidence 112346778888887764
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0032 Score=70.17 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=78.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++++++ ..+|+|||+||... + .+.++..+++|+.|+..+++.+...
T Consensus 61 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 134 (257)
T PRK12744 61 AKAVAFQADLTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH 134 (257)
T ss_pred CcEEEEecCcCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 36889999999854 444443 35899999999632 1 1234467889999999999988642
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
....++++++|+.+... .| ....|+.||++.|.+++++.+
T Consensus 135 ~~~~~~iv~~~ss~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la~- 175 (257)
T PRK12744 135 LNDNGKIVTLVTSLLGAF----------TP----------------------------FYSAYAGSKAPVEHFTRAASK- 175 (257)
T ss_pred hccCCCEEEEecchhccc----------CC----------------------------CcccchhhHHHHHHHHHHHHH-
Confidence 22245676643322111 00 113599999999999988751
Q ss_pred ccccccccCCCceeEeccCccch
Q psy13944 694 ARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+-...++.+..++|.+|.-
T Consensus 176 ----e~~~~~i~v~~v~pg~v~t 194 (257)
T PRK12744 176 ----EFGARGISVTAVGPGPMDT 194 (257)
T ss_pred ----HhCcCceEEEEEecCcccc
Confidence 1123478888889988853
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0025 Score=70.29 Aligned_cols=118 Identities=14% Similarity=0.061 Sum_probs=79.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-----------cCccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-----------EDVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLK 609 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-----------~~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLe 609 (1217)
.++.++.+|+++++ +++.++ ..+|++||+|+.... .+.++..+++|+.|+..+++
T Consensus 45 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 118 (243)
T PRK07023 45 ERLAEVELDLSDAA------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTA 118 (243)
T ss_pred CeEEEEEeccCCHH------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHH
Confidence 46889999999864 333311 147899999996532 23345778899999877766
Q ss_pred HHHhc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHH
Q psy13944 610 MAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYII 686 (1217)
Q Consensus 610 lA~~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~l 686 (1217)
.+... .+..++|++||...+... + ...+|+.||+..|.+
T Consensus 119 ~~~~~~~~~~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~ 160 (243)
T PRK07023 119 ALAQAASDAAERRILHISSGAARNAY----------A----------------------------GWSVYCATKAALDHH 160 (243)
T ss_pred HHHHHhhccCCCEEEEEeChhhcCCC----------C----------------------------CchHHHHHHHHHHHH
Confidence 66532 134689999997543210 0 012599999999999
Q ss_pred hhhhcccccccccccCCCceeEeccCccch
Q psy13944 687 CLSFWGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 687 v~~y~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+.+|. ++ ...++.+..++|..+..
T Consensus 161 ~~~~~-----~~-~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 161 ARAVA-----LD-ANRALRIVSLAPGVVDT 184 (243)
T ss_pred HHHHH-----hc-CCCCcEEEEecCCcccc
Confidence 98775 12 34577888888877743
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0035 Score=71.45 Aligned_cols=148 Identities=12% Similarity=0.062 Sum_probs=95.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-H-------------H---HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-F-------------D---RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL 70 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-f-------------d---~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L 70 (1217)
.=+||+.+.-|....++|.+...+.+ . + .+.++....-.++.++.+|++++ ++...+
T Consensus 9 ~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~------~~v~~~ 82 (286)
T PRK07791 9 VIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADW------DGAANL 82 (286)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCH------HHHHHH
Confidence 34788888888888888876322211 1 1 11111111234678899999997 665544
Q ss_pred c-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CC------CCeEEEEcCccccc
Q psy13944 71 R-------EDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KN------LDSFIYVSTAYSNC 127 (1217)
Q Consensus 71 ~-------~~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~------lk~fV~vSTa~v~g 127 (1217)
+ ..+|++||+|+.... . +.++..+++|+.|+..+++++... .. -.++|++||.....
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 3 467999999997531 1 235578999999999988777421 00 13799999965421
Q ss_pred ccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecc
Q psy13944 128 NIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPS 199 (1217)
Q Consensus 128 ~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPs 199 (1217)
. .+ .-..|+.||+..+.+.+..+ .++.+..+.|+
T Consensus 163 ~----------~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 163 G----------SV----------------------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred C----------CC----------------------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence 1 00 01359999999988876643 57889999997
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0043 Score=68.52 Aligned_cols=118 Identities=18% Similarity=0.128 Sum_probs=77.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------C-ccEEEEcCcccc---------c----hhcHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------D-VNIVFHVAATVK---------F----DEHFQTAFEINCKGTEKL 607 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~-vdvVfH~AA~v~---------f----~~~~~~~~~~NV~GT~nL 607 (1217)
.++.++.+|+++++ +++.+++ . +|+|||+|+... + .+.+...+++|+.|+.++
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 125 (253)
T PRK08642 52 DRAIALQADVTDRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNT 125 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHH
Confidence 46889999999854 3444332 2 899999997421 1 123446789999999999
Q ss_pred HHHHHhc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHH
Q psy13944 608 LKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWY 684 (1217)
Q Consensus 608 LelA~~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE 684 (1217)
++.|... .+..++|++||...... . ...+.|+.||+..|
T Consensus 126 ~~~~~~~~~~~~~g~iv~iss~~~~~~------------~--------------------------~~~~~Y~~sK~a~~ 167 (253)
T PRK08642 126 IQAALPGMREQGFGRIINIGTNLFQNP------------V--------------------------VPYHDYTTAKAALL 167 (253)
T ss_pred HHHHHHHHHhcCCeEEEEECCccccCC------------C--------------------------CCccchHHHHHHHH
Confidence 9998631 23468999998532111 0 00135999999999
Q ss_pred HHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 685 IICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 685 ~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+++++. ++-...++.+..++|-+|-
T Consensus 168 ~l~~~la-----~~~~~~~i~v~~i~pG~v~ 193 (253)
T PRK08642 168 GLTRNLA-----AELGPYGITVNMVSGGLLR 193 (253)
T ss_pred HHHHHHH-----HHhCccCeEEEEEeecccC
Confidence 9998764 1122345666666776663
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0026 Score=74.37 Aligned_cols=119 Identities=17% Similarity=0.129 Sum_probs=76.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAE-- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~-- 612 (1217)
.++.++.+|++|++ +++.++ ..+|++||+|+...+. +.++..+++|+.|+.++.+.+.
T Consensus 57 ~~~~~v~~Dv~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~ 130 (334)
T PRK07109 57 GEALAVVADVADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRH 130 (334)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999854 444443 3689999999964321 2344678888887777555543
Q ss_pred --hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 613 --EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 613 --~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+. +..+||++||...+... | ....|+.||+..+.++.++
T Consensus 131 ~~~~-~~g~iV~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~l 171 (334)
T PRK07109 131 MRPR-DRGAIIQVGSALAYRSI----------P----------------------------LQSAYCAAKHAIRGFTDSL 171 (334)
T ss_pred HHhc-CCcEEEEeCChhhccCC----------C----------------------------cchHHHHHHHHHHHHHHHH
Confidence 32 34689999998765321 1 0125999999988888664
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. .+....+.++.+..++|-.|.
T Consensus 172 ~---~el~~~~~~I~v~~v~Pg~v~ 193 (334)
T PRK07109 172 R---CELLHDGSPVSVTMVQPPAVN 193 (334)
T ss_pred H---HHHhhcCCCeEEEEEeCCCcc
Confidence 3 110112245777788887764
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0026 Score=70.74 Aligned_cols=119 Identities=15% Similarity=0.107 Sum_probs=79.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|++||+|+..... +.++..+++|+.|+..+++.+...
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (253)
T PRK05867 58 GKVVPVCCDVSQHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA 131 (253)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 46888999999864 333332 3689999999964321 234467889999999999988532
Q ss_pred --C-C-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 --K-N-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 --~-~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ + -.++|++||...... . .| .....|+.||+..|.+++++
T Consensus 132 ~~~~~~~g~iv~~sS~~~~~~--~-------~~---------------------------~~~~~Y~asKaal~~~~~~l 175 (253)
T PRK05867 132 MVKQGQGGVIINTASMSGHII--N-------VP---------------------------QQVSHYCASKAAVIHLTKAM 175 (253)
T ss_pred HHhcCCCcEEEEECcHHhcCC--C-------CC---------------------------CCccchHHHHHHHHHHHHHH
Confidence 1 1 236889888643210 0 00 01125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+..+.|.+|.
T Consensus 176 a------~e~~~~gI~vn~i~PG~v~ 195 (253)
T PRK05867 176 A------VELAPHKIRVNSVSPGYIL 195 (253)
T ss_pred H------HHHhHhCeEEEEeecCCCC
Confidence 4 222 347788888888885
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0043 Score=68.55 Aligned_cols=119 Identities=13% Similarity=0.072 Sum_probs=81.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC----ccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc-CC
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED----VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM-KN 616 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~----vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~-~~ 616 (1217)
.++.++.+|+++++ +++.++++ +|+++|+|+...+. +.+...+++|+.|+.++++.+... .+
T Consensus 46 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 119 (240)
T PRK06101 46 ANIFTLAFDVTDHP------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC 119 (240)
T ss_pred CCCeEEEeeCCCHH------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 35788999999854 45555543 58999999854321 234468999999999999998853 22
Q ss_pred CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccc
Q psy13944 617 LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARS 696 (1217)
Q Consensus 617 lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~ 696 (1217)
-.++|++||...... .| ....|+.||+..|.++.++..
T Consensus 120 ~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~l~~---- 157 (240)
T PRK06101 120 GHRVVIVGSIASELA----------LP----------------------------RAEAYGASKAAVAYFARTLQL---- 157 (240)
T ss_pred CCeEEEEechhhccC----------CC----------------------------CCchhhHHHHHHHHHHHHHHH----
Confidence 357898888542110 01 112599999999999976541
Q ss_pred cccccCCCceeEeccCccch
Q psy13944 697 REKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 697 ~~~~~~~l~~~i~rp~~v~e 716 (1217)
+-...++.+..++|..|..
T Consensus 158 -e~~~~gi~v~~v~pg~i~t 176 (240)
T PRK06101 158 -DLRPKGIEVVTVFPGFVAT 176 (240)
T ss_pred -HHHhcCceEEEEeCCcCCC
Confidence 1124578888889988853
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0056 Score=67.00 Aligned_cols=118 Identities=19% Similarity=0.064 Sum_probs=79.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHhc---CCC
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEEM---KNL 617 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~~---~~l 617 (1217)
.++.++.+|++++ -+...+....+|+|||+|+... + .+.++..+++|+.|+.++++.+... .+-
T Consensus 45 ~~~~~~~~D~~~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 119 (235)
T PRK06550 45 GNFHFLQLDLSDD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKS 119 (235)
T ss_pred CcEEEEECChHHH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 3578899999886 1223333457899999998531 1 1234568899999999999988642 123
Q ss_pred cEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccc
Q psy13944 618 DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSR 697 (1217)
Q Consensus 618 k~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~ 697 (1217)
.+||++||....... .....|+.||+..|.++.++.
T Consensus 120 ~~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~la------ 155 (235)
T PRK06550 120 GIIINMCSIASFVAG--------------------------------------GGGAAYTASKHALAGFTKQLA------ 155 (235)
T ss_pred cEEEEEcChhhccCC--------------------------------------CCCcccHHHHHHHHHHHHHHH------
Confidence 579999997643210 011259999999888887654
Q ss_pred ccc-cCCCceeEeccCccc
Q psy13944 698 EKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 698 ~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+..++|..|-
T Consensus 156 ~~~~~~gi~v~~v~pg~v~ 174 (235)
T PRK06550 156 LDYAKDGIQVFGIAPGAVK 174 (235)
T ss_pred HHhhhcCeEEEEEeeCCcc
Confidence 222 347888888888774
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0059 Score=67.74 Aligned_cols=122 Identities=16% Similarity=0.193 Sum_probs=79.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh---------cCccEEEEcCcccc---ch----hcHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR---------EDVNIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~---------~~vdvVfH~AA~v~---f~----~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.++..+..|+++.+ +. ....+.+. ..+|++||+||... +. +.++..+++|+.|+..+++.+.
T Consensus 54 ~~~~~~~~D~~~~~-~~-~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 131 (252)
T PRK12747 54 GSAFSIGANLESLH-GV-EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQAL 131 (252)
T ss_pred CceEEEecccCCHH-HH-HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34678889999853 11 11112221 16899999999532 21 2245678899999999998776
Q ss_pred h-cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 613 E-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 613 ~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
. +.+-.++|++||....... | ....|+.||+..+.+++++.
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~la 173 (252)
T PRK12747 132 SRLRDNSRIINISSAATRISL----------P----------------------------DFIAYSMTKGAINTMTFTLA 173 (252)
T ss_pred HHhhcCCeEEEECCcccccCC----------C----------------------------CchhHHHHHHHHHHHHHHHH
Confidence 4 2223489999998643210 0 01259999999999998754
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+..+.|.+|-
T Consensus 174 -----~e~~~~girvn~v~Pg~v~ 192 (252)
T PRK12747 174 -----KQLGARGITVNAILPGFIK 192 (252)
T ss_pred -----HHHhHcCCEEEEEecCCcc
Confidence 1122456777778887774
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0042 Score=69.13 Aligned_cols=118 Identities=14% Similarity=0.176 Sum_probs=81.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... .+.++..+.+|+.|+.++++.+...
T Consensus 60 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 133 (257)
T PRK09242 60 REVHGLAADVSDDE------DRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPL 133 (257)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46889999999854 333332 357999999986321 2345578899999999999888531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||.....+. + ....|+.||+..+.+++++.
T Consensus 134 ~~~~~~~~ii~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 175 (257)
T PRK09242 134 LKQHASSAIVNIGSVSGLTHV----------R----------------------------SGAPYGMTKAALLQMTRNLA 175 (257)
T ss_pred HHhcCCceEEEECccccCCCC----------C----------------------------CCcchHHHHHHHHHHHHHHH
Confidence 234689999997654321 0 11259999999999997653
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+-...++.+..++|.++.
T Consensus 176 -----~e~~~~~i~v~~i~Pg~i~ 194 (257)
T PRK09242 176 -----VEWAEDGIRVNAVAPWYIR 194 (257)
T ss_pred -----HHHHHhCeEEEEEEECCCC
Confidence 1112346777788888775
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0037 Score=70.94 Aligned_cols=150 Identities=17% Similarity=0.127 Sum_probs=94.6
Q ss_pred ccCCC--CCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 10 HNGAK--TCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 10 ~tg~r--~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
+||+. ..-|....++|.+.....+ -+.+.+...+...+ .++.+|++++ ++.+.++ .
T Consensus 10 ItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~------~~v~~~~~~i~~~~g 82 (274)
T PRK08415 10 IVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKP------EHFKSLAESLKKDLG 82 (274)
T ss_pred EECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCH------HHHHHHHHHHHHHcC
Confidence 67775 4567778888876322111 11111111111123 5789999998 6665543 4
Q ss_pred CccEEEEcCccCC-------c-c---cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVK-------F-D---EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~-------f-~---e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+|+... + + +.++..+++|+.|+..+.+.+.. +..-.++|++||...... .|
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~----------~~ 152 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY----------VP 152 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC----------CC
Confidence 5799999999642 1 1 22457899999999998887754 222248999998643110 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||+..+.+.+..+ .++.+..+-|+.|-.+
T Consensus 153 ----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 153 ----------------------------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred ----------------------------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 01359999999888876654 5788888888877654
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0044 Score=72.08 Aligned_cols=159 Identities=16% Similarity=0.168 Sum_probs=98.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----HHHh---hhcCcc-c-CCCeEEEEccCCCCCCCCCHHHHHHhcC--CccE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----FDRL---RKENAN-F-TERIVVLTADLQSDGLGLDEKEKKVLRE--DVNI 76 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~L---r~~~p~-~-~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDi 76 (1217)
=+||+.+.-|....++|.+...+-+ -+.+ .++... . ..++..+.+|+++. +.-..+.+...+. ++|+
T Consensus 57 lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~l~~~~~~~didi 135 (320)
T PLN02780 57 LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGD-IDEGVKRIKETIEGLDVGV 135 (320)
T ss_pred EEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCC-cHHHHHHHHHHhcCCCccE
Confidence 3789999999999999876322110 1111 111111 1 13577888999852 1000112223333 3569
Q ss_pred EEEcCccCC-----ccc----CHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 77 VFHVAATVK-----FDE----HFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 77 ViH~AA~v~-----f~e----~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+||+||... +.+ ..+..+++|+.|+..+.+++.. + .+..++|++||...+... +.|
T Consensus 136 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--------~~p---- 203 (320)
T PLN02780 136 LINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--------SDP---- 203 (320)
T ss_pred EEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--------CCc----
Confidence 999999742 211 2346899999999999888753 1 244689999997553210 001
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||+..+.+.+..+ .|+.+..+.|+.|-.+
T Consensus 204 ------------------------~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 204 ------------------------LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred ------------------------cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 01469999999998876654 5899999999977554
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0051 Score=68.69 Aligned_cols=150 Identities=13% Similarity=0.007 Sum_probs=92.2
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh-h----HHH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD-A----FDR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~-v----fd~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
+||+.+.-|....++|.+..... + -+. +.++.. ...++.++.+|++++ ++++.++ ..+
T Consensus 5 ItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~Dv~d~------~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 5 VTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK-EYGEVYAVKADLSDK------DDLKNLVKEAWELLGGI 77 (259)
T ss_pred EEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH-hcCCceEEEcCCCCH------HHHHHHHHHHHHhcCCC
Confidence 57777788888888887632110 0 011 111111 123678899999997 6666554 468
Q ss_pred cEEEEcCccCC-----ccc----CHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 75 NIVFHVAATVK-----FDE----HFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 75 DiViH~AA~v~-----f~e----~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
|+|||+||... +.+ .+...+.+|+.++..+...+ .+..+-.++|++||..+... .|
T Consensus 78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~----------~~- 146 (259)
T PRK08340 78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP----------MP- 146 (259)
T ss_pred CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC----------CC-
Confidence 99999999642 111 23345678888866554433 21123458999999765221 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..+.+.+..+ .++.+..+.|+.+-.+
T Consensus 147 ---------------------------~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 147 ---------------------------PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 01369999999988887654 4677777888765443
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0052 Score=67.76 Aligned_cols=119 Identities=13% Similarity=0.084 Sum_probs=80.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh----cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR----EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM--- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~----~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~--- 614 (1217)
.++.++++|++++. +++.++ ..+|+|||+|+..... +.....+++|+.|+.++++.+...
T Consensus 51 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 124 (243)
T PRK07102 51 VAVSTHELDILDTA------SHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEA 124 (243)
T ss_pred CeEEEEecCCCChH------HHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 46899999999864 344443 3469999999864321 222357889999999999887642
Q ss_pred CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccc
Q psy13944 615 KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCA 694 (1217)
Q Consensus 615 ~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a 694 (1217)
.+..+||++||...... .+ ....|+.||+..+.+++++..
T Consensus 125 ~~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l~~-- 164 (243)
T PRK07102 125 RGSGTIVGISSVAGDRG----------RA----------------------------SNYVYGSAKAALTAFLSGLRN-- 164 (243)
T ss_pred CCCCEEEEEecccccCC----------CC----------------------------CCcccHHHHHHHHHHHHHHHH--
Confidence 24568999998743211 00 012499999999999977641
Q ss_pred cccccccCCCceeEeccCccch
Q psy13944 695 RSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 695 ~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+....++.+..++|.+|-.
T Consensus 165 ---el~~~gi~v~~v~pg~v~t 183 (243)
T PRK07102 165 ---RLFKSGVHVLTVKPGFVRT 183 (243)
T ss_pred ---HhhccCcEEEEEecCcccC
Confidence 1124578888888887753
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0084 Score=69.15 Aligned_cols=111 Identities=15% Similarity=0.087 Sum_probs=67.7
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhH------H---HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAF------D---RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------ED 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vf------d---~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~ 73 (1217)
+||+.+.-|....++|.+.-...+. + .+.++......++.++.+|+++. ++++.++ ..
T Consensus 2 ITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~~~ 75 (308)
T PLN00015 2 ITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASL------DSVRQFVDNFRRSGRP 75 (308)
T ss_pred EeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCH------HHHHHHHHHHHhcCCC
Confidence 3566666677777777653311111 1 11111111124678889999998 6655443 35
Q ss_pred ccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHh-c--CC--CCeEEEEcCcccc
Q psy13944 74 VNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE-M--KN--LDSFIYVSTAYSN 126 (1217)
Q Consensus 74 VDiViH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~-~--~~--lk~fV~vSTa~v~ 126 (1217)
+|++||+||... + .+.++..+++|+.|+..+++.+.. + .+ -.++|++||...+
T Consensus 76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 799999999742 1 123457899999998887666543 1 12 3589999997553
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0038 Score=69.50 Aligned_cols=120 Identities=15% Similarity=0.117 Sum_probs=79.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 58 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (254)
T PRK06114 58 RRAIQIAADVTSKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARA 131 (254)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 46788999999864 333333 347999999996532 2344578889999998887776431
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||....... + +.....|+.||+..+.+++++.
T Consensus 132 ~~~~~~~~iv~isS~~~~~~~----------~--------------------------~~~~~~Y~~sKaa~~~l~~~la 175 (254)
T PRK06114 132 MLENGGGSIVNIASMSGIIVN----------R--------------------------GLLQAHYNASKAGVIHLSKSLA 175 (254)
T ss_pred HHhcCCcEEEEECchhhcCCC----------C--------------------------CCCcchHHHHHHHHHHHHHHHH
Confidence 134589999986543210 0 0001259999999999997754
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+..++|-++.
T Consensus 176 -----~e~~~~gi~v~~v~PG~i~ 194 (254)
T PRK06114 176 -----MEWVGRGIRVNSISPGYTA 194 (254)
T ss_pred -----HHHhhcCeEEEEEeecCcc
Confidence 1222457888888887774
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0067 Score=67.43 Aligned_cols=118 Identities=15% Similarity=0.124 Sum_probs=79.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++.+++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (260)
T PRK06198 56 AKAVFVQADLSDVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKL 129 (260)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46888999999854 344333 358999999996431 2233467899999999999888542
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
....++|++||..+++.. ...+.|+.||+..|.++.++
T Consensus 130 ~~~~~~~g~iv~~ss~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~~ 171 (260)
T PRK06198 130 MRRRKAEGTIVNIGSMSAHGGQ--------------------------------------PFLAAYCASKGALATLTRNA 171 (260)
T ss_pred HHhcCCCCEEEEECCcccccCC--------------------------------------CCcchhHHHHHHHHHHHHHH
Confidence 112479999997655421 01135999999999998765
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+ +-...++.+..++|.++.
T Consensus 172 a~-----e~~~~~i~v~~i~pg~~~ 191 (260)
T PRK06198 172 AY-----ALLRNRIRVNGLNIGWMA 191 (260)
T ss_pred HH-----HhcccCeEEEEEeecccc
Confidence 31 122345777777887764
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0064 Score=70.39 Aligned_cols=184 Identities=13% Similarity=0.047 Sum_probs=98.9
Q ss_pred cccCCCCCCcccHHHHHHHHh-cCh-hH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFF-ADD-AF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l-~~~-vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
=+||+.+.-|....++|.+.. ... +. +.+.++......++..+.+|+++. ++++.++ .
T Consensus 7 lITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 7 IITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSL------DSVRQFVQQFRESGR 80 (314)
T ss_pred EEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCH------HHHHHHHHHHHHhCC
Confidence 367888888888888887643 211 11 111111111224678889999998 5555443 4
Q ss_pred CccEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHhHh----cC-CCCeEEEEcCcccccccccccccccCC
Q psy13944 73 DVNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEE----MK-NLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-----~---e~l~~a~~vNV~GT~~LLelAk~----~~-~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|++||+||.... . +.++..+++|+.|+..+.+.+.. .+ +-.++|++||...+..... .. +++
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~--~~-~~~ 157 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLA--GN-VPP 157 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCC--Cc-CCC
Confidence 58999999997421 1 23457789999998888666543 11 1358999999866532100 00 000
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc------CCCCEEEEecceecc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM------DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~------~gLPvvIvRPsiV~G 203 (1217)
+.+...+.......... .......-. .....|+.||++...+..+.. .++.++.+.||.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 225 (314)
T TIGR01289 158 KANLGDLSGLAAGFKAP-IAMIDGKEF-KGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD 225 (314)
T ss_pred cccccccccccccCCCc-ccccCCCCc-chhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence 10100000000000000 000000000 111369999999766655442 367788899998853
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0012 Score=69.10 Aligned_cols=136 Identities=17% Similarity=0.180 Sum_probs=99.0
Q ss_pred hhHHHhhhcCc--ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhH
Q psy13944 32 DAFDRLRKENA--NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAE 109 (1217)
Q Consensus 32 ~vfd~Lr~~~p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk 109 (1217)
.++-.+|++.| ...+++..+..|.... +++.....++|+.|-+-|+.+-....+..+++.-.-...+.++|+
T Consensus 46 KV~~i~RR~~~d~at~k~v~q~~vDf~Kl------~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AK 119 (238)
T KOG4039|consen 46 KVYAILRRELPDPATDKVVAQVEVDFSKL------SQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAK 119 (238)
T ss_pred eEEEEEeccCCCccccceeeeEEechHHH------HHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHH
Confidence 34445566543 4456678888998887 788888899999999999876544445555666666677888999
Q ss_pred hcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcC
Q psy13944 110 EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMD 189 (1217)
Q Consensus 110 ~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~ 189 (1217)
+ ++++.|+.+||+.+..... -.|-.+|-.-|+-+.+...
T Consensus 120 e-~Gck~fvLvSS~GAd~sSr----------------------------------------FlY~k~KGEvE~~v~eL~F 158 (238)
T KOG4039|consen 120 E-KGCKTFVLVSSAGADPSSR----------------------------------------FLYMKMKGEVERDVIELDF 158 (238)
T ss_pred h-CCCeEEEEEeccCCCcccc----------------------------------------eeeeeccchhhhhhhhccc
Confidence 8 7999999999986522110 1388888888888876541
Q ss_pred CCCEEEEecceeccCCCCCCcc-cccc
Q psy13944 190 KLPLGIVRPSIVMPVVEEPCPM-WVKG 215 (1217)
Q Consensus 190 gLPvvIvRPsiV~G~~~eP~pG-Widn 215 (1217)
-.++|+||+.+.|.+.+..+| |..+
T Consensus 159 -~~~~i~RPG~ll~~R~esr~geflg~ 184 (238)
T KOG4039|consen 159 -KHIIILRPGPLLGERTESRQGEFLGN 184 (238)
T ss_pred -cEEEEecCcceecccccccccchhhh
Confidence 248999999999998887665 5443
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0052 Score=68.06 Aligned_cols=120 Identities=17% Similarity=0.136 Sum_probs=76.7
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh----cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHH----HHHHHhc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR----EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKL----LKMAEEM 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~----~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nL----LelA~~~ 614 (1217)
+++.+.+|+++++- + .+..+.+. ..+|.|+|+||.... .+.++..+++|+.|+.++ ++.+++.
T Consensus 46 ~~~~~~~D~~~~~~-~-~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 123 (256)
T PRK08017 46 GFTGILLDLDDPES-V-ERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH 123 (256)
T ss_pred CCeEEEeecCCHHH-H-HHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 36778899988531 0 01112221 357999999985331 123446889999999886 5555554
Q ss_pred CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccc
Q psy13944 615 KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCA 694 (1217)
Q Consensus 615 ~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a 694 (1217)
+..++|++||.+..... + ....|+.||+..|.+++++..
T Consensus 124 -~~~~iv~~ss~~~~~~~----------~----------------------------~~~~Y~~sK~~~~~~~~~l~~-- 162 (256)
T PRK08017 124 -GEGRIVMTSSVMGLIST----------P----------------------------GRGAYAASKYALEAWSDALRM-- 162 (256)
T ss_pred -CCCEEEEEcCcccccCC----------C----------------------------CccHHHHHHHHHHHHHHHHHH--
Confidence 46789999997543210 0 113599999999999876531
Q ss_pred cccccccCCCceeEeccCccc
Q psy13944 695 RSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 695 ~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+....++.+.+++|.++.
T Consensus 163 ---~~~~~~i~v~~v~pg~~~ 180 (256)
T PRK08017 163 ---ELRHSGIKVSLIEPGPIR 180 (256)
T ss_pred ---HHhhcCCEEEEEeCCCcc
Confidence 122456788888887764
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0048 Score=69.04 Aligned_cols=117 Identities=15% Similarity=0.077 Sum_probs=80.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc----------------hhcHHHHHHHHHHHHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF----------------DEHFQTAFEINCKGTEK 606 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f----------------~~~~~~~~~~NV~GT~n 606 (1217)
++.++.+|++++. +++.++ ..+|+|||+||.... .+.++..+++|+.|+..
T Consensus 50 ~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 123 (266)
T PRK06171 50 NYQFVPTDVSSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFL 123 (266)
T ss_pred ceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHH
Confidence 5788999999854 344433 357999999995321 12344688999999999
Q ss_pred HHHHHHhc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHH
Q psy13944 607 LLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAW 683 (1217)
Q Consensus 607 LLelA~~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lA 683 (1217)
+++.+... .+-.++|++||....... + ....|+.||+..
T Consensus 124 l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~ 165 (266)
T PRK06171 124 MSQAVARQMVKQHDGVIVNMSSEAGLEGS----------E----------------------------GQSCYAATKAAL 165 (266)
T ss_pred HHHHHHHHHHhcCCcEEEEEccccccCCC----------C----------------------------CCchhHHHHHHH
Confidence 99988743 123479999997543210 0 012599999999
Q ss_pred HHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 684 YIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 684 E~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
|.+++++. ++-...++.+..++|-++.
T Consensus 166 ~~l~~~la-----~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 166 NSFTRSWA-----KELGKHNIRVVGVAPGILE 192 (266)
T ss_pred HHHHHHHH-----HHhhhcCeEEEEEeccccc
Confidence 99997754 1112457888888898874
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0037 Score=69.47 Aligned_cols=120 Identities=11% Similarity=0.091 Sum_probs=81.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|++++. ++..++ ..+|+|||+|+.... .+.++..+++|+.|+.++.+.+..
T Consensus 60 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 133 (256)
T PRK06124 60 GAAEALAFDIADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQR 133 (256)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45889999999853 344333 356999999996432 123446788999999999977753
Q ss_pred c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+ .+..+||++||...... .+ ....|+.||+..+.+++.+.
T Consensus 134 ~~~~~~~~iv~~ss~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la 175 (256)
T PRK06124 134 MKRQGYGRIIAITSIAGQVA----------RA----------------------------GDAVYPAAKQGLTGLMRALA 175 (256)
T ss_pred HHhcCCcEEEEEeechhccC----------CC----------------------------CccHhHHHHHHHHHHHHHHH
Confidence 1 24568999999754321 00 11359999999999887653
Q ss_pred ccccccccc-cCCCceeEeccCccchhh
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e~~ 718 (1217)
..+ ..++.+..++|-+|....
T Consensus 176 ------~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 176 ------AEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred ------HHHHHhCcEEEEEEECCccCcc
Confidence 122 236788888898886544
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.005 Score=68.60 Aligned_cols=118 Identities=16% Similarity=0.153 Sum_probs=81.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+++|+|+.... .+.++..+++|+.|+..+.+.+...
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 128 (251)
T PRK12481 55 RKFHFITADLIQQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQ 128 (251)
T ss_pred CeEEEEEeCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHH
Confidence 46889999999854 444443 358999999996432 2345578889999999998877542
Q ss_pred ---CC-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+ -.++|++||...+... + ....|+.||+..+.+++++
T Consensus 129 ~~~~~~~g~ii~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~l~~~l 170 (251)
T PRK12481 129 FVKQGNGGKIINIASMLSFQGG----------I----------------------------RVPSYTASKSAVMGLTRAL 170 (251)
T ss_pred HHHcCCCCEEEEeCChhhcCCC----------C----------------------------CCcchHHHHHHHHHHHHHH
Confidence 11 2589999997654321 0 0015999999999999775
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++-...++.+..+.|.+|.
T Consensus 171 a-----~e~~~~girvn~v~PG~v~ 190 (251)
T PRK12481 171 A-----TELSQYNINVNAIAPGYMA 190 (251)
T ss_pred H-----HHHhhcCeEEEEEecCCCc
Confidence 4 1222457888888998875
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0041 Score=69.48 Aligned_cols=73 Identities=16% Similarity=0.322 Sum_probs=57.3
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
...+-+..-|+.|++ .+++..+..++||++-+. ++...--.+.++|+.|.++|...|+++ ++++|||+|+..
T Consensus 108 LGQvl~~~fd~~Ded------SIr~vvk~sNVVINLIGr-d~eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lg 179 (391)
T KOG2865|consen 108 LGQVLFMKFDLRDED------SIRAVVKHSNVVINLIGR-DYETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLG 179 (391)
T ss_pred ccceeeeccCCCCHH------HHHHHHHhCcEEEEeecc-ccccCCcccccccchHHHHHHHHHHhh-Chhheeehhhcc
Confidence 355778888888854 788888889999999884 121111146678999999999999998 899999999875
Q ss_pred e
Q psy13944 628 S 628 (1217)
Q Consensus 628 v 628 (1217)
+
T Consensus 180 a 180 (391)
T KOG2865|consen 180 A 180 (391)
T ss_pred c
Confidence 3
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.013 Score=65.64 Aligned_cols=151 Identities=15% Similarity=0.092 Sum_probs=97.1
Q ss_pred ccCCC--CCCcccHHHHHHHHhcChh-H-------HHhhhcCccc-CCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 10 HNGAK--TCKHNSILWVAKDFFADDA-F-------DRLRKENANF-TERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 10 ~tg~r--~kkg~~~~eRL~~~l~~~v-f-------d~Lr~~~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
+||+. ..-|....++|.+...+.+ . +.+.+...+. ..++.++.+|++++ ++.+.++
T Consensus 12 ItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~ 85 (257)
T PRK08594 12 VMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD------EEITACFETIKEEV 85 (257)
T ss_pred EECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH------HHHHHHHHHHHHhC
Confidence 77876 5778888888876322211 1 1111111111 24688899999998 6665544
Q ss_pred CCccEEEEcCccCCc--------cc---CHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCC
Q psy13944 72 EDVNIVFHVAATVKF--------DE---HFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f--------~e---~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
..+|++||+|+.... +. .+...+++|+.|+..+++.+.. +..--++|++||...... .
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~----------~ 155 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV----------V 155 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC----------C
Confidence 457999999986421 11 2346788999999888877654 222247999998653110 0
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
| . -..|+.||+..+.+.+..+ .++.+..+.|+.|-.+
T Consensus 156 ~---------------------------~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 156 Q---------------------------N-YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred C---------------------------C-CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 0 0 1369999999998886654 5788999999877654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0066 Score=68.77 Aligned_cols=150 Identities=15% Similarity=0.110 Sum_probs=97.1
Q ss_pred ccCCC--CCCcccHHHHHHHHhcChhH--------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 10 HNGAK--TCKHNSILWVAKDFFADDAF--------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 10 ~tg~r--~kkg~~~~eRL~~~l~~~vf--------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
+||+. ..-|....++|.+.....+. +.+.+... .......+.+|++++ ++.+.++ .
T Consensus 15 ItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g 87 (272)
T PRK08159 15 ILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAA-ELGAFVAGHCDVTDE------ASIDAVFETLEKKWG 87 (272)
T ss_pred EECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHH-hcCCceEEecCCCCH------HHHHHHHHHHHHhcC
Confidence 77875 56788888888763322111 11111111 113356789999998 6666554 3
Q ss_pred CccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKF-----------DEHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-----------~e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+|+.... .+.++..+++|+.|+..+++.+.. +.+-.++|++||..... +.|
T Consensus 88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~----------~~p 157 (272)
T PRK08159 88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK----------VMP 157 (272)
T ss_pred CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc----------CCC
Confidence 57999999996531 123557889999999999988764 22225889998853211 000
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||+..+.+.+..+ .++.+..+.|+.|-.+
T Consensus 158 ----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 198 (272)
T PRK08159 158 ----------------------------HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL 198 (272)
T ss_pred ----------------------------cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence 01359999999888876553 5788888999877553
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0038 Score=69.98 Aligned_cols=151 Identities=19% Similarity=0.120 Sum_probs=97.5
Q ss_pred cccCCC--CCCcccHHHHHHHHhcCh-----------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc----
Q psy13944 9 GHNGAK--TCKHNSILWVAKDFFADD-----------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR---- 71 (1217)
Q Consensus 9 g~tg~r--~kkg~~~~eRL~~~l~~~-----------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---- 71 (1217)
=+||+. +.-|....++|.+...+. .-+.+.+- .+...++.++.+|++++ ++.+.++
T Consensus 10 lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~------~~v~~~~~~~~ 82 (258)
T PRK07370 10 LVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVREL-TEPLNPSLFLPCDVQDD------AQIEETFETIK 82 (258)
T ss_pred EEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHH-HhccCcceEeecCcCCH------HHHHHHHHHHH
Confidence 367765 567888888887632211 11111111 01123467889999998 6666544
Q ss_pred ---CCccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccc
Q psy13944 72 ---EDVNIVFHVAATVK-------FD----EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 72 ---~~VDiViH~AA~v~-------f~----e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
..+|++||+|+... +. +.++..+++|+.|+..+++.+.. +..-.++|++||......
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-------- 154 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA-------- 154 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC--------
Confidence 35799999999642 21 22457889999999998887653 222258999998643110
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.| .-..|+.||+..+.+.+..+ .++.+..+.|+.|-.+
T Consensus 155 --~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 155 --IP----------------------------NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred --Cc----------------------------ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 00 01369999999998887654 5788999999988654
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0062 Score=66.85 Aligned_cols=119 Identities=13% Similarity=0.051 Sum_probs=78.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc-------chhcHHHHHHHHHHHHHHHHHHHH-h
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK-------FDEHFQTAFEINCKGTEKLLKMAE-E 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~-------f~~~~~~~~~~NV~GT~nLLelA~-~ 613 (1217)
.++.++.+|+++++ +++.++ ..+|++||+|+... ..+.++..+++|+.|+.++++.+. .
T Consensus 48 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (239)
T TIGR01831 48 GNARLLQFDVADRV------ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP 121 (239)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999864 333332 35799999998532 123455788999999999988662 1
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ .+..+||++||...... .| ....|+.||+..+.+++++
T Consensus 122 ~~~~~~~~~iv~vsS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 163 (239)
T TIGR01831 122 MIRARQGGRIITLASVSGVMG----------NR----------------------------GQVNYSAAKAGLIGATKAL 163 (239)
T ss_pred HHhhcCCeEEEEEcchhhccC----------CC----------------------------CCcchHHHHHHHHHHHHHH
Confidence 1 23468999999643211 00 0124999999888888765
Q ss_pred cccccccccccCCCceeEeccCccch
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
. ++....++.+..++|.++..
T Consensus 164 a-----~e~~~~gi~v~~v~Pg~v~t 184 (239)
T TIGR01831 164 A-----VELAKRKITVNCIAPGLIDT 184 (239)
T ss_pred H-----HHHhHhCeEEEEEEEccCcc
Confidence 3 11224578888888887753
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.045 Score=61.27 Aligned_cols=96 Identities=14% Similarity=0.100 Sum_probs=65.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-HHHhh-hcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-FDRLR-KENA-NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-fd~Lr-~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~ 85 (1217)
-+||+.+.-|....++|.+...+.+ .++-. +... ........+.+|+++. +++...+.++|++||+||...
T Consensus 18 lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~iDilVnnAG~~~ 91 (245)
T PRK12367 18 GITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKE------ESLDKQLASLDVLILNHGINP 91 (245)
T ss_pred EEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCH------HHHHHhcCCCCEEEECCccCC
Confidence 4789999999999999976432211 11100 0000 0011225788999988 777778889999999999743
Q ss_pred c----ccCHHHHHHHHHHHHHHHHHHhHh
Q psy13944 86 F----DEHFQTAFEINCKGTEKLLKMAEE 110 (1217)
Q Consensus 86 f----~e~l~~a~~vNV~GT~~LLelAk~ 110 (1217)
. .+.++..+++|+.|+.++++.+..
T Consensus 92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 92 GGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred cCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2 224567899999999999998754
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0084 Score=67.76 Aligned_cols=116 Identities=14% Similarity=0.169 Sum_probs=76.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++..++ ..+|+|||+||...+. +.++..+++|+.|+.++++++...
T Consensus 62 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 135 (273)
T PRK08278 62 GQALPLVGDVRDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH 135 (273)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 46889999999864 344333 3689999999964321 233467889999999999999742
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+-.+++++||...... .+. +....|+.||++.|.+++++.
T Consensus 136 ~~~~~~g~iv~iss~~~~~~-------~~~-----------------------------~~~~~Y~~sK~a~~~~~~~la 179 (273)
T PRK08278 136 LKKSENPHILTLSPPLNLDP-------KWF-----------------------------APHTAYTMAKYGMSLCTLGLA 179 (273)
T ss_pred HHhcCCCEEEEECCchhccc-------ccc-----------------------------CCcchhHHHHHHHHHHHHHHH
Confidence 11236888876421100 000 111359999999999998875
Q ss_pred ccccccccc-cCCCceeEeccC
Q psy13944 692 GCARSREKC-SHDRGVRVCRNH 712 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~ 712 (1217)
.++ ..++.+..+.|.
T Consensus 180 ------~el~~~~I~v~~i~Pg 195 (273)
T PRK08278 180 ------EEFRDDGIAVNALWPR 195 (273)
T ss_pred ------HHhhhcCcEEEEEeCC
Confidence 223 346777777776
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0071 Score=67.50 Aligned_cols=192 Identities=17% Similarity=0.048 Sum_probs=116.3
Q ss_pred cccCCC--CCCcccHHHHHHHHhcChh-H---HHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 9 GHNGAK--TCKHNSILWVAKDFFADDA-F---DRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 9 g~tg~r--~kkg~~~~eRL~~~l~~~v-f---d~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
=+||+. +.-|....++|.+-....+ . +++.+...+ ...++.++.+|++++ ++.+.++ ..+
T Consensus 11 lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 11 VVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD------ESIERAFATIKERVGKI 84 (252)
T ss_pred EEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCH------HHHHHHHHHHHHHhCCC
Confidence 378887 5788888888876322111 1 111111001 123578899999998 6665543 457
Q ss_pred cEEEEcCccCCc-------c----cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 75 NIVFHVAATVKF-------D----EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 75 DiViH~AA~v~f-------~----e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
|++||+|+.... . +.++..+++|+.|+..+++.+.. +.+-.++|++||...... .|
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~----------~~-- 152 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA----------IP-- 152 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc----------CC--
Confidence 999999986421 1 22457788999999998888754 222247899988643110 00
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.-..|+.||+.-+.+.+..+ .|+.+..+.|+.|-.+.... + .
T Consensus 153 --------------------------~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~---~----~ 199 (252)
T PRK06079 153 --------------------------NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG---I----K 199 (252)
T ss_pred --------------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc---C----C
Confidence 01369999999998886654 57899999999886542211 1 0
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
....+....... .+ ...+...+|++++++.++..
T Consensus 200 ~~~~~~~~~~~~----~p-----~~r~~~pedva~~~~~l~s~ 233 (252)
T PRK06079 200 GHKDLLKESDSR----TV-----DGVGVTIEEVGNTAAFLLSD 233 (252)
T ss_pred ChHHHHHHHHhc----Cc-----ccCCCCHHHHHHHHHHHhCc
Confidence 111121111111 11 12266789999998877654
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0047 Score=69.11 Aligned_cols=118 Identities=17% Similarity=0.093 Sum_probs=79.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----c---h-----hcHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----F---D-----EHFQTAFEINCKGTEKLLK 609 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f---~-----~~~~~~~~~NV~GT~nLLe 609 (1217)
.++..+.+|+++++ +.+.++ ..+|++||+||... + . +.++..+++|+.|+..+++
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 124 (262)
T TIGR03325 51 DAVVGVEGDVRSLD------DHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVK 124 (262)
T ss_pred CceEEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHH
Confidence 45888999999853 233322 36799999998532 1 1 1345788999999999999
Q ss_pred HHHhc--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 610 MAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 610 lA~~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
.+... +.-.++|++||...... .+ ....|+.||+..|.++
T Consensus 125 ~~~~~~~~~~g~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sKaa~~~l~ 166 (262)
T TIGR03325 125 AALPALVASRGSVIFTISNAGFYP----------NG----------------------------GGPLYTAAKHAVVGLV 166 (262)
T ss_pred HHHHHHhhcCCCEEEEeccceecC----------CC----------------------------CCchhHHHHHHHHHHH
Confidence 99753 11246888887643211 00 0125999999999999
Q ss_pred hhhcccccccccccCCCceeEeccCccch
Q psy13944 688 LSFWGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 688 ~~y~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+++. .+++....+..+.|-.|..
T Consensus 167 ~~la------~e~~~~irvn~i~PG~i~t 189 (262)
T TIGR03325 167 KELA------FELAPYVRVNGVAPGGMSS 189 (262)
T ss_pred HHHH------HhhccCeEEEEEecCCCcC
Confidence 8764 3455556666778877753
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0049 Score=70.63 Aligned_cols=120 Identities=14% Similarity=0.116 Sum_probs=80.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++..+.+|+++++ +++.++ ..+|+|||+|+...+ .+.++..+++|+.|+.++++.+...
T Consensus 57 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~ 130 (296)
T PRK05872 57 DRVLTVVADVTDLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPA 130 (296)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35677789999854 343332 358999999996432 2344578899999999999988642
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
++..++|++||..++... | ....|+.||+..|.++.+..
T Consensus 131 ~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~~~~~l~- 171 (296)
T PRK05872 131 LIERRGYVLQVSSLAAFAAA----------P----------------------------GMAAYCASKAGVEAFANALR- 171 (296)
T ss_pred HHHcCCEEEEEeCHhhcCCC----------C----------------------------CchHHHHHHHHHHHHHHHHH-
Confidence 123479999997654321 0 11259999999999987653
Q ss_pred cccccccccCCCceeEeccCccchh
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
.+-...++.+..+.|.++...
T Consensus 172 ----~e~~~~gi~v~~v~Pg~v~T~ 192 (296)
T PRK05872 172 ----LEVAHHGVTVGSAYLSWIDTD 192 (296)
T ss_pred ----HHHHHHCcEEEEEecCcccch
Confidence 111234667777778766533
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0042 Score=71.86 Aligned_cols=129 Identities=13% Similarity=0.078 Sum_probs=78.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch------hcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD------EHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~------~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++.+ +++.+. ..+|++||+||..... +.++..+.+|+.|...+.+.+...
T Consensus 65 ~~v~~~~~Dl~d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l 138 (313)
T PRK05854 65 AKLSLRALDLSSLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLL 138 (313)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHH
Confidence 36889999999853 344333 3489999999964321 345578899999988887776521
Q ss_pred -CCCcEEEEEccceeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 -KNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+-.++|++||........ .+.+. .+ ...-..|+.||++.+.++..+
T Consensus 139 ~~~~~riv~vsS~~~~~~~~~~~~~~~~---~~--------------------------~~~~~~Y~~SK~a~~~~~~~l 189 (313)
T PRK05854 139 RAGRARVTSQSSIAARRGAINWDDLNWE---RS--------------------------YAGMRAYSQSKIAVGLFALEL 189 (313)
T ss_pred HhCCCCeEEEechhhcCCCcCccccccc---cc--------------------------CcchhhhHHHHHHHHHHHHHH
Confidence 1234799999875432110 00000 00 011136999999988888665
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. +.....+.++.+..+.|-.|.
T Consensus 190 a---~~~~~~~~gI~v~~v~PG~v~ 211 (313)
T PRK05854 190 D---RRSRAAGWGITSNLAHPGVAP 211 (313)
T ss_pred H---HHhhcCCCCeEEEEEecceec
Confidence 3 100111345666677777664
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0075 Score=68.04 Aligned_cols=120 Identities=15% Similarity=0.148 Sum_probs=80.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-----h---hcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-----~---~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|++++. +++.++ ..+|++||+||.... . +.+...+++|+.|+..+++.+..
T Consensus 54 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 127 (272)
T PRK08589 54 GKAKAYHVDISDEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLP 127 (272)
T ss_pred CeEEEEEeecCCHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46889999999863 343333 357999999986421 1 23446788999999888777653
Q ss_pred c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
. ++-.++|++||...+... + ....|+.||+..+.+++++.
T Consensus 128 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la 169 (272)
T PRK08589 128 LMMEQGGSIINTSSFSGQAAD----------L----------------------------YRSGYNAAKGAVINFTKSIA 169 (272)
T ss_pred HHHHcCCEEEEeCchhhcCCC----------C----------------------------CCchHHHHHHHHHHHHHHHH
Confidence 2 111589999997543210 0 11259999999999998764
Q ss_pred ccccccccccCCCceeEeccCccchh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
++-...++.+..+.|-+|...
T Consensus 170 -----~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 170 -----IEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred -----HHhhhcCeEEEEEecCcccCc
Confidence 122245788888888887543
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.01 Score=66.64 Aligned_cols=190 Identities=18% Similarity=0.124 Sum_probs=111.5
Q ss_pred ccCC--CCCCcccHHHHHHHHhcChhH--------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 10 HNGA--KTCKHNSILWVAKDFFADDAF--------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 10 ~tg~--r~kkg~~~~eRL~~~l~~~vf--------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
+||+ ...-|....++|.+...+.+. +.+++...+ ......+.+|++++ ++.+.++ .
T Consensus 11 ITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g 83 (261)
T PRK08690 11 ITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAE-LDSELVFRCDVASD------DEINQVFADLGKHWD 83 (261)
T ss_pred EECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhc-cCCceEEECCCCCH------HHHHHHHHHHHHHhC
Confidence 6775 345678888888763322111 111111111 12345789999998 7776654 3
Q ss_pred CccEEEEcCccCCc--------c-c---CHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 DVNIVFHVAATVKF--------D-E---HFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ~VDiViH~AA~v~f--------~-e---~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|++||+||.... . . .++..+++|+.|+..+.+.+..+ .+-.++|++||......
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~---------- 153 (261)
T PRK08690 84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA---------- 153 (261)
T ss_pred CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC----------
Confidence 58999999997531 1 1 23456788999998887765432 11247899988643211
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
.| .+ ..|+.||+..+.+.+..+ .++.+..+.|+.|-.+... ++.
T Consensus 154 ~~---------------------------~~-~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~---~~~ 202 (261)
T PRK08690 154 IP---------------------------NY-NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAAS---GIA 202 (261)
T ss_pred CC---------------------------Cc-ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhh---cCC
Confidence 00 01 359999999988776543 6788999999887554211 110
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+ .......+... . ....+.-.+||+++++.++..
T Consensus 203 ~----~~~~~~~~~~~----~-----p~~r~~~peevA~~v~~l~s~ 236 (261)
T PRK08690 203 D----FGKLLGHVAAH----N-----PLRRNVTIEEVGNTAAFLLSD 236 (261)
T ss_pred c----hHHHHHHHhhc----C-----CCCCCCCHHHHHHHHHHHhCc
Confidence 0 01111111111 0 112366789999998887654
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.013 Score=66.11 Aligned_cols=151 Identities=17% Similarity=0.115 Sum_probs=94.7
Q ss_pred ccCCCC--CCcccHHHHHHHHhcChh-H---HHhhh---cCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CC
Q psy13944 10 HNGAKT--CKHNSILWVAKDFFADDA-F---DRLRK---ENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------ED 73 (1217)
Q Consensus 10 ~tg~r~--kkg~~~~eRL~~~l~~~v-f---d~Lr~---~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~ 73 (1217)
+||+.+ .-|....++|.+.....+ . +++.+ +......++.++.+|++++ ++++.++ ..
T Consensus 11 ITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 11 VTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAED------ASIDAMFAELGKVWPK 84 (262)
T ss_pred EeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCH------HHHHHHHHHHHhhcCC
Confidence 778765 566778888876322211 1 11101 0001123467889999998 7776554 34
Q ss_pred ccEEEEcCccCCc--------c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 74 VNIVFHVAATVKF--------D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 74 VDiViH~AA~v~f--------~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
+|++||+||.... . +.++..+++|+.|...+.+.+..+ ..-.++|++||...... .|
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~----------~~ 154 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------IP 154 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC----------CC
Confidence 7999999986421 1 123467889999998888877543 11147889988643110 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+.-+.+++..+ .++.+..+-|+.|-.+
T Consensus 155 ----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (262)
T PRK07984 155 ----------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL 195 (262)
T ss_pred ----------------------------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence 11369999999998887654 5788888888877543
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0057 Score=70.48 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=76.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ +.+.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 62 ~~~~~~~~Dv~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~ 135 (306)
T PRK07792 62 AKAVAVAGDISQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYW 135 (306)
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46889999999854 344433 368999999997542 2345578899999999999887521
Q ss_pred ----C-----CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHH
Q psy13944 615 ----K-----NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYI 685 (1217)
Q Consensus 615 ----~-----~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~ 685 (1217)
+ .-.++|++||...... .+ ....|+.||+..+.
T Consensus 136 ~~~~~~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~ 177 (306)
T PRK07792 136 RAKAKAAGGPVYGRIVNTSSEAGLVG----------PV----------------------------GQANYGAAKAGITA 177 (306)
T ss_pred HHhhcccCCCCCcEEEEECCcccccC----------CC----------------------------CCchHHHHHHHHHH
Confidence 0 0137999998654321 00 01259999999999
Q ss_pred HhhhhcccccccccccCCCceeEeccC
Q psy13944 686 ICLSFWGCARSREKCSHDRGVRVCRNH 712 (1217)
Q Consensus 686 lv~~y~~~a~~~~~~~~~l~~~i~rp~ 712 (1217)
+++++.. +-...++.+..+.|-
T Consensus 178 l~~~la~-----e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 178 LTLSAAR-----ALGRYGVRANAICPR 199 (306)
T ss_pred HHHHHHH-----HhhhcCeEEEEECCC
Confidence 9987641 112345666556664
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0059 Score=68.28 Aligned_cols=117 Identities=17% Similarity=0.070 Sum_probs=78.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch-----hc-------HHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD-----EH-------FQTAFEINCKGTEKLLK 609 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~-----~~-------~~~~~~~NV~GT~nLLe 609 (1217)
.++.++.+|+++++ +.+.++ ..+|++||+|+..... .+ ++..+++|+.|+..+++
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 125 (263)
T PRK06200 52 DHVLVVEGDVTSYA------DNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAK 125 (263)
T ss_pred CcceEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHH
Confidence 35788999999854 333332 3589999999964321 11 44567899999999998
Q ss_pred HHHhc--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 610 MAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 610 lA~~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
.+... +.-.++|++||...+... + ....|+.||+..|.++
T Consensus 126 ~~~~~~~~~~g~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~ 167 (263)
T PRK06200 126 AALPALKASGGSMIFTLSNSSFYPG----------G----------------------------GGPLYTASKHAVVGLV 167 (263)
T ss_pred HHHHHHHhcCCEEEEECChhhcCCC----------C----------------------------CCchhHHHHHHHHHHH
Confidence 88642 112479999987544210 0 0125999999999999
Q ss_pred hhhcccccccccccCCCceeEeccCccc
Q psy13944 688 LSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 688 ~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+++. ..+++++.+-.+.|-+|.
T Consensus 168 ~~la------~el~~~Irvn~i~PG~i~ 189 (263)
T PRK06200 168 RQLA------YELAPKIRVNGVAPGGTV 189 (263)
T ss_pred HHHH------HHHhcCcEEEEEeCCccc
Confidence 8754 345556666677787664
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.012 Score=66.16 Aligned_cols=190 Identities=19% Similarity=0.101 Sum_probs=111.9
Q ss_pred ccCC--CCCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 10 HNGA--KTCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 10 ~tg~--r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
+||+ ...-|....++|.+...+.+ -+.+.+...+ .....++.+|++++ ++++.++ .
T Consensus 11 ItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 83 (260)
T PRK06997 11 ITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE-FGSDLVFPCDVASD------EQIDALFASLGQHWD 83 (260)
T ss_pred EeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHh-cCCcceeeccCCCH------HHHHHHHHHHHHHhC
Confidence 6775 34567888888876322211 1111111111 12234688999998 7776555 4
Q ss_pred CccEEEEcCccCCc--------c----cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 DVNIVFHVAATVKF--------D----EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~f--------~----e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|++||+|+.... . +.++..+++|+.|+..+.+++.. +.+-.++|++||...... .
T Consensus 84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~----------~ 153 (260)
T PRK06997 84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV----------V 153 (260)
T ss_pred CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC----------C
Confidence 57999999987421 1 13446789999999998888754 222257999998643110 0
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
| ....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+.... + .
T Consensus 154 ~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~---~-~ 201 (260)
T PRK06997 154 P----------------------------NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG---I-K 201 (260)
T ss_pred C----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc---c-c
Confidence 0 01369999999988876654 57888889998775532110 1 0
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.. ......+... .+ ...+...+|+++++..++..
T Consensus 202 ~~---~~~~~~~~~~----~p-----~~r~~~pedva~~~~~l~s~ 235 (260)
T PRK06997 202 DF---GKILDFVESN----AP-----LRRNVTIEEVGNVAAFLLSD 235 (260)
T ss_pred ch---hhHHHHHHhc----Cc-----ccccCCHHHHHHHHHHHhCc
Confidence 00 0111111111 01 11257789999999887654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.01 Score=66.28 Aligned_cols=118 Identities=17% Similarity=0.170 Sum_probs=78.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh------cCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR------EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~------~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|++++. +++.+. ..+|+|||+||...+. +.+...+++|+.|+.++++.+...
T Consensus 53 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 126 (263)
T PRK09072 53 GRHRWVVADLTSEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLL 126 (263)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 46889999999854 333332 4689999999975431 334567889999999999988642
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||...... .+ ....|+.||+..+.++.++.
T Consensus 127 ~~~~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l~- 167 (263)
T PRK09072 127 RAQPSAMVVNVGSTFGSIG----------YP----------------------------GYASYCASKFALRGFSEALR- 167 (263)
T ss_pred HhcCCCEEEEecChhhCcC----------CC----------------------------CccHHHHHHHHHHHHHHHHH-
Confidence 12357888888643211 00 11259999998888776654
Q ss_pred cccccccccCCCceeEeccCccc
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++..+.++.+..+.|.++.
T Consensus 168 ----~~~~~~~i~v~~v~Pg~~~ 186 (263)
T PRK09072 168 ----RELADTGVRVLYLAPRATR 186 (263)
T ss_pred ----HHhcccCcEEEEEecCccc
Confidence 1112456777777777663
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0091 Score=65.72 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=77.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc----------------hhcHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF----------------DEHFQTAFEINCKGTE 605 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f----------------~~~~~~~~~~NV~GT~ 605 (1217)
.++.++.+|+++++ .++.++ ..+|+|||+|+.... .+.+...+++|+.|+.
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 127 (253)
T PRK08217 54 TEVRGYAANVTDEE------DVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVF 127 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHH
Confidence 46888999999854 232222 357999999985321 1334467789999999
Q ss_pred HHHHHHHh----cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHH
Q psy13944 606 KLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKN 681 (1217)
Q Consensus 606 nLLelA~~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~ 681 (1217)
.+++.+.. ...-..+|++||...++.. ....|+.||+
T Consensus 128 ~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---------------------------------------~~~~Y~~sK~ 168 (253)
T PRK08217 128 LCGREAAAKMIESGSKGVIINISSIARAGNM---------------------------------------GQTNYSASKA 168 (253)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEccccccCCC---------------------------------------CCchhHHHHH
Confidence 88765542 1122468999987554421 0125999999
Q ss_pred HHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 682 AWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 682 lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
..|.+++++.+ +....++.+..++|..|.
T Consensus 169 a~~~l~~~la~-----~~~~~~i~v~~v~pg~v~ 197 (253)
T PRK08217 169 GVAAMTVTWAK-----ELARYGIRVAAIAPGVIE 197 (253)
T ss_pred HHHHHHHHHHH-----HHHHcCcEEEEEeeCCCc
Confidence 99999987641 112357888888887774
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.011 Score=66.92 Aligned_cols=151 Identities=18% Similarity=0.123 Sum_probs=97.2
Q ss_pred cccCCCC--CCcccHHHHHHHHhcChhH--------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 9 GHNGAKT--CKHNSILWVAKDFFADDAF--------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 9 g~tg~r~--kkg~~~~eRL~~~l~~~vf--------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
-+||+.+ .-|....++|.+.....+. +.+.+.... ......+.+|++++ ++.+.++
T Consensus 11 lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~g~~~~~~~Dv~d~------~~v~~~~~~~~~~~ 83 (271)
T PRK06505 11 LIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAES-LGSDFVLPCDVEDI------ASVDAVFEALEKKW 83 (271)
T ss_pred EEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHh-cCCceEEeCCCCCH------HHHHHHHHHHHHHh
Confidence 3788775 6788888888773322111 111111111 12235789999998 6666554
Q ss_pred CCccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCC
Q psy13944 72 EDVNIVFHVAATVKF-----------DEHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-----------~e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
..+|++||+||.... .+.++..+++|+.|+.++++.+.. +..-.++|++||...... .
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~----------~ 153 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV----------M 153 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc----------C
Confidence 357999999996431 123457788999999998887653 322247999998643110 0
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
| .-..|+.||+..+.+.+..+ .|+.+..+.|+.|-.+
T Consensus 154 ~----------------------------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 154 P----------------------------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred C----------------------------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence 0 01359999999888776654 5788999999987664
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.015 Score=63.95 Aligned_cols=120 Identities=18% Similarity=0.185 Sum_probs=77.7
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHH-------h-cCccEEEEcCcccc----ch----hcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVL-------R-EDVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L-------~-~~vdvVfH~AA~v~----f~----~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
++.++.+|+++.. .+++..+ . ..+|+|||+||... +. +.+...+++|+.|+.++++.+..
T Consensus 57 ~~~~~~~D~~~~~----~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 132 (239)
T PRK08703 57 EPFAIRFDLMSAE----EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFP 132 (239)
T ss_pred CcceEEeeecccc----hHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4667889997632 1222222 2 46899999999532 11 23446789999999999888854
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+-.++|++||...... .+ ....|+.||+..|.++.++
T Consensus 133 ~~~~~~~~~iv~~ss~~~~~~----------~~----------------------------~~~~Y~~sKaa~~~~~~~l 174 (239)
T PRK08703 133 LLKQSPDASVIFVGESHGETP----------KA----------------------------YWGGFGASKAALNYLCKVA 174 (239)
T ss_pred HHHhCCCCEEEEEeccccccC----------CC----------------------------CccchHHhHHHHHHHHHHH
Confidence 2 12358999988542110 00 1125999999999999876
Q ss_pred ccccccccccc--CCCceeEeccCccchh
Q psy13944 691 WGCARSREKCS--HDRGVRVCRNHPVGET 717 (1217)
Q Consensus 691 ~~~a~~~~~~~--~~l~~~i~rp~~v~e~ 717 (1217)
. ..++ .++.+..++|..|...
T Consensus 175 a------~e~~~~~~i~v~~v~pG~v~t~ 197 (239)
T PRK08703 175 A------DEWERFGNLRANVLVPGPINSP 197 (239)
T ss_pred H------HHhccCCCeEEEEEecCcccCc
Confidence 4 2222 3578888899888543
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.013 Score=66.74 Aligned_cols=133 Identities=20% Similarity=0.178 Sum_probs=87.8
Q ss_pred ccCCCCCCcccHHHHHHHHhcC------------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHH-------Hh
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD------------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKK-------VL 70 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~------------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~-------~L 70 (1217)
+||+.+.-|++..-.|.+...+ .+-+.+++..+.. ++.++.+|+++. ++.. .-
T Consensus 17 ITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~--~v~~~~~Dvs~~------~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 17 ITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE--KVLVLQLDVSDE------ESVKKFVEWAIRH 88 (282)
T ss_pred EeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC--ccEEEeCccCCH------HHHHHHHHHHHHh
Confidence 6777777777666666552221 1112333333322 799999999998 6666 34
Q ss_pred cCCccEEEEcCccCCc--c-----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 71 REDVNIVFHVAATVKF--D-----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 71 ~~~VDiViH~AA~v~f--~-----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
+.++|+.+|-||.... . +..+..+++|+.|+..+.+++... .+--++|.+||...+- +.|
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~----------~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM----------PLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc----------CCC
Confidence 5789999999998642 1 123468999999999888877532 1224899999975422 111
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM 188 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~ 188 (1217)
....|..||.+-+.+....+
T Consensus 159 ----------------------------~~~~Y~ASK~Al~~f~etLR 178 (282)
T KOG1205|consen 159 ----------------------------FRSIYSASKHALEGFFETLR 178 (282)
T ss_pred ----------------------------cccccchHHHHHHHHHHHHH
Confidence 11269999999998876655
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.023 Score=64.28 Aligned_cols=154 Identities=15% Similarity=0.118 Sum_probs=102.3
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCc----ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENA----NFTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p----~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
..-+||+.+.-|....++|.+-..+ +--++|.+-.. ...-++.++..|++++ ++...+..
T Consensus 8 ~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~------~~~~~l~~~l~~~ 81 (265)
T COG0300 8 TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP------EALERLEDELKER 81 (265)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh------hHHHHHHHHHHhc
Confidence 4558999999999999999873221 11222222221 2234578999999999 66666543
Q ss_pred --CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 --DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 --~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+.|++||...+. +...+++++|+.++..|-.+... | .+--.+|-++|...+-+ .|
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p----------~p 151 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP----------TP 151 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC----------Cc
Confidence 589999999986442 22347999999998887666532 1 12237999999765332 11
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHH----HHHHHHhc-CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAC----EQMVREKM-DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~A----E~lv~~~~-~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||+.- |-+=.+.. .|+.+..+-|+-+.-.
T Consensus 152 ----------------------------~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~ 192 (265)
T COG0300 152 ----------------------------YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTE 192 (265)
T ss_pred ----------------------------chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccc
Confidence 115799999864 33333434 6889999999876655
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.015 Score=62.24 Aligned_cols=116 Identities=17% Similarity=0.172 Sum_probs=78.2
Q ss_pred EEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-cCCCcEEE
Q psy13944 553 VLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-MKNLDSFI 621 (1217)
Q Consensus 553 ~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~-~~~lk~fV 621 (1217)
.+.+|+++++ +++.+.+ ++|+|||+||...+ .+.+...+++|+.|+.++++.+.. +.+..+|+
T Consensus 35 ~~~~D~~~~~------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 108 (199)
T PRK07578 35 DVQVDITDPA------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFT 108 (199)
T ss_pred ceEecCCChH------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 3578998854 4444443 68999999996432 123446788999999999998864 22335799
Q ss_pred EEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccccccc
Q psy13944 622 YVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCS 701 (1217)
Q Consensus 622 ~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~ 701 (1217)
++||...... .| ....|+.||+..+.+++++. ..+.
T Consensus 109 ~iss~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la------~e~~ 144 (199)
T PRK07578 109 LTSGILSDEP----------IP----------------------------GGASAATVNGALEGFVKAAA------LELP 144 (199)
T ss_pred EEcccccCCC----------CC----------------------------CchHHHHHHHHHHHHHHHHH------HHcc
Confidence 9988653211 00 11259999999898886642 2235
Q ss_pred CCCceeEeccCccchhh
Q psy13944 702 HDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 702 ~~l~~~i~rp~~v~e~~ 718 (1217)
.++.+..+.|-++-+.+
T Consensus 145 ~gi~v~~i~Pg~v~t~~ 161 (199)
T PRK07578 145 RGIRINVVSPTVLTESL 161 (199)
T ss_pred CCeEEEEEcCCcccCch
Confidence 67778888898886654
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.011 Score=66.32 Aligned_cols=120 Identities=15% Similarity=0.074 Sum_probs=79.8
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHH-------hcCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVL-------REDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L-------~~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
++.++.+|+++++ +++.+ ...+|++||+|+.... .+.+...+++|+.|+.++++.+...
T Consensus 51 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 124 (273)
T PRK07825 51 LVVGGPLDVTDPA------SFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRM 124 (273)
T ss_pred cceEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999854 33222 2468999999996432 1234467899999999988776531
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||....... | ....|+.||+..+.++.+..
T Consensus 125 ~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~l~- 165 (273)
T PRK07825 125 VPRGRGHVVNVASLAGKIPV----------P----------------------------GMATYCASKHAVVGFTDAAR- 165 (273)
T ss_pred HhCCCCEEEEEcCccccCCC----------C----------------------------CCcchHHHHHHHHHHHHHHH-
Confidence 245689999997543210 0 01249999998777765532
Q ss_pred cccccccccCCCceeEeccCccchhh
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
.+-...++.+.+++|.+|...+
T Consensus 166 ----~el~~~gi~v~~v~Pg~v~t~~ 187 (273)
T PRK07825 166 ----LELRGTGVHVSVVLPSFVNTEL 187 (273)
T ss_pred ----HHhhccCcEEEEEeCCcCcchh
Confidence 1112457888999998886544
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0097 Score=67.50 Aligned_cols=62 Identities=16% Similarity=0.196 Sum_probs=45.9
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh------cC-ccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR------ED-VNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~------~~-vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
.++.+.+|++|++ .+..++ .+ +|.|||+++... . .+..+.+++++|++. ++++|||
T Consensus 40 ~~~~~~~d~~d~~------~l~~a~~~~~~~~g~~d~v~~~~~~~~-~---------~~~~~~~~i~aa~~~-gv~~~V~ 102 (285)
T TIGR03649 40 NEKHVKFDWLDED------TWDNPFSSDDGMEPEISAVYLVAPPIP-D---------LAPPMIKFIDFARSK-GVRRFVL 102 (285)
T ss_pred CCccccccCCCHH------HHHHHHhcccCcCCceeEEEEeCCCCC-C---------hhHHHHHHHHHHHHc-CCCEEEE
Confidence 4567789998864 566655 56 999999987532 1 123456899999997 8999999
Q ss_pred Ecccee
Q psy13944 623 VSTAYS 628 (1217)
Q Consensus 623 vSTa~v 628 (1217)
+||+.+
T Consensus 103 ~Ss~~~ 108 (285)
T TIGR03649 103 LSASII 108 (285)
T ss_pred eecccc
Confidence 998654
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.016 Score=64.53 Aligned_cols=153 Identities=17% Similarity=0.127 Sum_probs=99.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhh---hcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhc---CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLR---KENA-NFTERIVVLTADLQSDGLGLDEKEKKVLR---EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr---~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~---~~VD 75 (1217)
.=++|+.+.-|..+.++|.+.--.. +. +.+. ++.. ....++.++.+|++++ +++..++ ..+|
T Consensus 10 vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~------~~~~~~~~~~g~id 83 (259)
T PRK06125 10 VLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP------EAREQLAAEAGDID 83 (259)
T ss_pred EEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH------HHHHHHHHHhCCCC
Confidence 4478888888888888888632110 11 1111 1111 1134688999999987 6665544 4689
Q ss_pred EEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
++||+|+... +. +.++..+++|+.|...+++.+.. + .+-.++|++||....- +.+
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----------~~~----- 148 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN----------PDA----- 148 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC----------CCC-----
Confidence 9999999743 11 23457789999999988887632 2 1224789998853210 000
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.+ ..|+.+|+.-+.+.+..+ .++.+..+.|+.+-.+
T Consensus 149 ----------------------~~-~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 149 ----------------------DY-ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred ----------------------Cc-hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 01 258999999888877653 5789999999877654
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0034 Score=64.86 Aligned_cols=134 Identities=18% Similarity=0.177 Sum_probs=93.3
Q ss_pred ccCCCCCCcccHHHHHHHHhc--------C---hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 10 HNGAKTCKHNSILWVAKDFFA--------D---DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~--------~---~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
+||+.+.-|....++|.+-.. + +-.+.+.++.+....++.++.+|++++ ++.+.+++
T Consensus 5 ItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 5 ITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDP------ESIRALIEEVIKRF 78 (167)
T ss_dssp EETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSH------HHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccc------cccccccccccccc
Confidence 567777777777777776522 1 112223222233347899999999998 77776653
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
.+|++||+|+.... .+.++..+++|+.+...+.+++.. .+-.++|++||....-+ .|
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~----------~~---- 143 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIAGVRG----------SP---- 143 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGGGTSS----------ST----
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchhhccC----------CC----
Confidence 57999999998652 133558899999999999999987 46679999999754221 11
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM 188 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~ 188 (1217)
.+ ..|+.||+..+.+++..+
T Consensus 144 -----------------------~~-~~Y~askaal~~~~~~la 163 (167)
T PF00106_consen 144 -----------------------GM-SAYSASKAALRGLTQSLA 163 (167)
T ss_dssp -----------------------TB-HHHHHHHHHHHHHHHHHH
T ss_pred -----------------------CC-hhHHHHHHHHHHHHHHHH
Confidence 01 259999999999887654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0092 Score=69.80 Aligned_cols=117 Identities=12% Similarity=0.087 Sum_probs=76.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc---h----hcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f---~----~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+. ..+|++||+|+...+ . +.++..+++|+.|+.++.+.+...
T Consensus 56 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~ 129 (330)
T PRK06139 56 AEVLVVPTDVTDAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPI 129 (330)
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45788999999854 455443 468999999995432 1 334467899999999988776421
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...+.. .| ....|+.||+.-+.++.+..
T Consensus 130 ~~~~~~g~iV~isS~~~~~~----------~p----------------------------~~~~Y~asKaal~~~~~sL~ 171 (330)
T PRK06139 130 FKKQGHGIFINMISLGGFAA----------QP----------------------------YAAAYSASKFGLRGFSEALR 171 (330)
T ss_pred HHHcCCCEEEEEcChhhcCC----------CC----------------------------CchhHHHHHHHHHHHHHHHH
Confidence 13357999998754321 11 11259999997666665532
Q ss_pred ccccccccccC--CCceeEeccCccc
Q psy13944 692 GCARSREKCSH--DRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~--~l~~~i~rp~~v~ 715 (1217)
.++++ ++.+..+.|..|-
T Consensus 172 ------~El~~~~gI~V~~v~Pg~v~ 191 (330)
T PRK06139 172 ------GELADHPDIHVCDVYPAFMD 191 (330)
T ss_pred ------HHhCCCCCeEEEEEecCCcc
Confidence 23332 5667777776664
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.012 Score=64.67 Aligned_cols=118 Identities=15% Similarity=0.149 Sum_probs=76.7
Q ss_pred EEEEEcccCCCCCCCCHHHHHHH---hcCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-C--C-
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVL---REDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-K--N- 616 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L---~~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~-~--~- 616 (1217)
+.++.+|+++++- + .+..+.+ ...+|++||+|+.... .+.++..+++|+.|+..+.+.+... . +
T Consensus 48 ~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~ 125 (236)
T PRK06483 48 AQCIQADFSTNAG-I-MAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH 125 (236)
T ss_pred CEEEEcCCCCHHH-H-HHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC
Confidence 5788999998641 0 1111222 2358999999985321 2345578899999999887776642 1 1
Q ss_pred -CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 617 -LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 617 -lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
..++|++||...... . .....|+.||+..|.+++++.
T Consensus 126 ~~g~iv~~ss~~~~~~----------~----------------------------~~~~~Y~asKaal~~l~~~~a---- 163 (236)
T PRK06483 126 AASDIIHITDYVVEKG----------S----------------------------DKHIAYAASKAALDNMTLSFA---- 163 (236)
T ss_pred CCceEEEEcchhhccC----------C----------------------------CCCccHHHHHHHHHHHHHHHH----
Confidence 247999988542211 0 011359999999999998865
Q ss_pred ccccccCCCceeEeccCcc
Q psy13944 696 SREKCSHDRGVRVCRNHPV 714 (1217)
Q Consensus 696 ~~~~~~~~l~~~i~rp~~v 714 (1217)
..++.++.+-.+.|.++
T Consensus 164 --~e~~~~irvn~v~Pg~~ 180 (236)
T PRK06483 164 --AKLAPEVKVNSIAPALI 180 (236)
T ss_pred --HHHCCCcEEEEEccCce
Confidence 34555677777888877
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.011 Score=66.01 Aligned_cols=118 Identities=12% Similarity=0.089 Sum_probs=79.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++. +++.++ ..+|+|||+|+.... .+.++..+.+|+.|+.++++.+...
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (256)
T PRK12743 52 VRAEIRQLDLSDLP------EGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARH 125 (256)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999854 333332 358999999996432 2344578899999999999988653
Q ss_pred C----CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 K----NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ~----~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
- +-.++|++||...... .+ ....|+.||+..+.+++++
T Consensus 126 l~~~~~~g~ii~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~l~~~l 167 (256)
T PRK12743 126 MVKQGQGGRIINITSVHEHTP----------LP----------------------------GASAYTAAKHALGGLTKAM 167 (256)
T ss_pred HHhcCCCeEEEEEeeccccCC----------CC----------------------------CcchhHHHHHHHHHHHHHH
Confidence 1 1247999998642111 00 0125999999999998765
Q ss_pred cccccccccc-cCCCceeEeccCccch
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
. ..+ ..++.+..++|-++..
T Consensus 168 a------~~~~~~~i~v~~v~Pg~~~t 188 (256)
T PRK12743 168 A------LELVEHGILVNAVAPGAIAT 188 (256)
T ss_pred H------HHhhhhCeEEEEEEeCCccC
Confidence 3 122 3467777888877753
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.018 Score=62.77 Aligned_cols=119 Identities=15% Similarity=0.055 Sum_probs=80.0
Q ss_pred EEEEEcccCCCCCCCCHHHHHHH---hc--CccEEEEcCcccc---------chhcHHHHHHHHHHHHHHHHHHHHhc--
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVL---RE--DVNIVFHVAATVK---------FDEHFQTAFEINCKGTEKLLKMAEEM-- 614 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L---~~--~vdvVfH~AA~v~---------f~~~~~~~~~~NV~GT~nLLelA~~~-- 614 (1217)
++++.+|+++.+ +++.+ +. .+|+|||+|+... -.+.++..+++|+.|+.++++.+...
T Consensus 46 ~~~~~~D~~~~~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 119 (222)
T PRK06953 46 AEALALDVADPA------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVE 119 (222)
T ss_pred ceEEEecCCCHH------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhh
Confidence 567899999964 33333 22 4899999998752 12344578999999999999998752
Q ss_pred CCCcEEEEEccce-eecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 KNLDSFIYVSTAY-SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 ~~lk~fV~vSTa~-v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
..-.+++++||.. .++... . .. ...|+.||+..|.++.++.
T Consensus 120 ~~~g~iv~isS~~~~~~~~~--------~--------------------------~~--~~~Y~~sK~a~~~~~~~~~-- 161 (222)
T PRK06953 120 AAGGVLAVLSSRMGSIGDAT--------G--------------------------TT--GWLYRASKAALNDALRAAS-- 161 (222)
T ss_pred ccCCeEEEEcCccccccccc--------C--------------------------CC--ccccHHhHHHHHHHHHHHh--
Confidence 1123688888854 233200 0 00 0149999999999997653
Q ss_pred ccccccccCCCceeEeccCccchhh
Q psy13944 694 ARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
....++.+..++|..+.+.+
T Consensus 162 -----~~~~~i~v~~v~Pg~i~t~~ 181 (222)
T PRK06953 162 -----LQARHATCIALHPGWVRTDM 181 (222)
T ss_pred -----hhccCcEEEEECCCeeecCC
Confidence 11246788888998887665
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.013 Score=65.69 Aligned_cols=190 Identities=16% Similarity=0.091 Sum_probs=113.0
Q ss_pred ccCCC--CCCcccHHHHHHHHhcChh-HH-------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 10 HNGAK--TCKHNSILWVAKDFFADDA-FD-------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 10 ~tg~r--~kkg~~~~eRL~~~l~~~v-fd-------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
+||+. ..-|....++|.+...+.+ .+ .+.+.. .....+.++.+|++++ ++.+.++ .
T Consensus 15 ItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g 87 (258)
T PRK07533 15 VVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLA-EELDAPIFLPLDVREP------GQLEAVFARIAEEWG 87 (258)
T ss_pred EECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHH-HhhccceEEecCcCCH------HHHHHHHHHHHHHcC
Confidence 67876 3678888888876332211 11 011100 1113356789999998 6666543 4
Q ss_pred CccEEEEcCccCCc--------c---cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKF--------D---EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f--------~---e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+|+.... + +.++..+++|+.|+..+++.+.. +..-.++|++||..... +.|
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~----------~~~ 157 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK----------VVE 157 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc----------CCc
Confidence 57999999986421 1 23457899999999999987753 22224788888854311 000
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
.-..|+.||+..+.+.+..+ .++.+..+.|+.|-.+..+. + ..
T Consensus 158 ----------------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~---~-~~ 205 (258)
T PRK07533 158 ----------------------------NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG---I-DD 205 (258)
T ss_pred ----------------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc---c-CC
Confidence 01369999999888776543 57889999998775543211 1 00
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. .......... .+ ...+...+|++++++.++..
T Consensus 206 ~---~~~~~~~~~~----~p-----~~r~~~p~dva~~~~~L~s~ 238 (258)
T PRK07533 206 F---DALLEDAAER----AP-----LRRLVDIDDVGAVAAFLASD 238 (258)
T ss_pred c---HHHHHHHHhc----CC-----cCCCCCHHHHHHHHHHHhCh
Confidence 0 1111111111 11 12356789999998877654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.017 Score=64.67 Aligned_cols=123 Identities=15% Similarity=0.044 Sum_probs=78.7
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh--cCccEEEEcCccccch----hcH---HHHHHHHHHHHHH----HHHHHHhcCC
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR--EDVNIVFHVAATVKFD----EHF---QTAFEINCKGTEK----LLKMAEEMKN 616 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~--~~vdvVfH~AA~v~f~----~~~---~~~~~~NV~GT~n----LLelA~~~~~ 616 (1217)
+++++.+|+++++- + .+..+.+. .++|++||+||..... ... .+.+++|+.|+.. +++++++. +
T Consensus 61 ~v~~~~~D~~~~~~-~-~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~ 137 (253)
T PRK07904 61 SVEVIDFDALDTDS-H-PKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-G 137 (253)
T ss_pred ceEEEEecCCChHH-H-HHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-C
Confidence 68999999998541 0 11123332 3699999999864321 111 1468999999887 45566554 4
Q ss_pred CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccc
Q psy13944 617 LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARS 696 (1217)
Q Consensus 617 lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~ 696 (1217)
..+||++||...... .+ ....|+.||+..+.+..+..
T Consensus 138 ~~~iv~isS~~g~~~----------~~----------------------------~~~~Y~~sKaa~~~~~~~l~----- 174 (253)
T PRK07904 138 FGQIIAMSSVAGERV----------RR----------------------------SNFVYGSTKAGLDGFYLGLG----- 174 (253)
T ss_pred CceEEEEechhhcCC----------CC----------------------------CCcchHHHHHHHHHHHHHHH-----
Confidence 578999999753211 00 01249999998877765532
Q ss_pred cccccCCCceeEeccCccchhh
Q psy13944 697 REKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 697 ~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
.+-...++.+.+++|..|.+.+
T Consensus 175 ~el~~~~i~v~~v~Pg~v~t~~ 196 (253)
T PRK07904 175 EALREYGVRVLVVRPGQVRTRM 196 (253)
T ss_pred HHHhhcCCEEEEEeeCceecch
Confidence 1122457899999999997655
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.019 Score=64.11 Aligned_cols=118 Identities=13% Similarity=0.087 Sum_probs=75.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---ch----hcHHHHHHHHHHHHHHHHHH----
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKM---- 610 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f~----~~~~~~~~~NV~GT~nLLel---- 610 (1217)
.++.++.+|++++. ++..++ ..+|++||+|+... +. +.++..+++|+.|+..+++.
T Consensus 57 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~ 130 (261)
T PRK08936 57 GEAIAVKGDVTVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKY 130 (261)
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45788999999854 344333 35899999999643 11 33446789999888765544
Q ss_pred HHhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 611 AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 611 A~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++...-.++|++||...... . +....|+.||+..+.++++.
T Consensus 131 ~~~~~~~g~iv~~sS~~~~~~----------~----------------------------~~~~~Y~~sKaa~~~~~~~l 172 (261)
T PRK08936 131 FVEHDIKGNIINMSSVHEQIP----------W----------------------------PLFVHYAASKGGVKLMTETL 172 (261)
T ss_pred HHhcCCCcEEEEEccccccCC----------C----------------------------CCCcccHHHHHHHHHHHHHH
Confidence 344322358999999643211 0 01125999998877777664
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+ +-...++.+..++|-+|-
T Consensus 173 a~-----e~~~~gi~v~~v~pg~v~ 192 (261)
T PRK08936 173 AM-----EYAPKGIRVNNIGPGAIN 192 (261)
T ss_pred HH-----HHhhcCeEEEEEEECcCC
Confidence 31 112347888888887774
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.015 Score=74.70 Aligned_cols=117 Identities=18% Similarity=0.209 Sum_probs=80.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 470 ~~v~~v~~Dvtd~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 543 (681)
T PRK08324 470 DRALGVACDVTDEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRI 543 (681)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999854 343333 368999999995431 2344568899999999998877532
Q ss_pred ---CCC-cEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KNL-DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+. .+||++||..+... .+ ....|+.||+..|.+++++
T Consensus 544 l~~~~~~g~iV~vsS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~l 585 (681)
T PRK08324 544 MKAQGLGGSIVFIASKNAVNP----------GP----------------------------NFGAYGAAKAAELHLVRQL 585 (681)
T ss_pred HHhcCCCcEEEEECCccccCC----------CC----------------------------CcHHHHHHHHHHHHHHHHH
Confidence 122 58999999654321 00 1125999999999999876
Q ss_pred cccccccccccCCCceeEeccCcc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPV 714 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v 714 (1217)
. ++-...++.+..++|..|
T Consensus 586 a-----~e~~~~gIrvn~v~Pg~v 604 (681)
T PRK08324 586 A-----LELGPDGIRVNGVNPDAV 604 (681)
T ss_pred H-----HHhcccCeEEEEEeCcee
Confidence 4 112235688888888887
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.023 Score=63.87 Aligned_cols=151 Identities=18% Similarity=0.160 Sum_probs=95.2
Q ss_pred cccCCCC--CCcccHHHHHHHHhcChhH--------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 9 GHNGAKT--CKHNSILWVAKDFFADDAF--------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 9 g~tg~r~--kkg~~~~eRL~~~l~~~vf--------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
=+||+.+ .-|....++|.+.....+. +.+++...+ .....++.+|++++ ++.+.++
T Consensus 12 lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~-~g~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 84 (260)
T PRK06603 12 LITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEE-IGCNFVSELDVTNP------KSISNLFDDIKEKW 84 (260)
T ss_pred EEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHh-cCCceEEEccCCCH------HHHHHHHHHHHHHc
Confidence 3778875 4678888888763221110 111111111 12234678999998 6666554
Q ss_pred CCccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCC
Q psy13944 72 EDVNIVFHVAATVK-------FD----EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 72 ~~VDiViH~AA~v~-------f~----e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
..+|+++|.|+... +. +.++..+++|+.|...+++.+.. +..-.++|++||..... +.
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----------~~ 154 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK----------VI 154 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc----------CC
Confidence 35799999998642 11 23457899999999998887643 22224899999854311 00
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
| ....|+.||+..+.+.+..+ .++.+..+-|+.|-.+
T Consensus 155 ~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 196 (260)
T PRK06603 155 P----------------------------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL 196 (260)
T ss_pred C----------------------------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence 0 01369999999988876554 5788899999887554
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.017 Score=64.61 Aligned_cols=119 Identities=17% Similarity=0.134 Sum_probs=79.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c---hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F---DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f---~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ ++++++ ..+|++||+|+... + .+.+...+++|+.|+.++++.+...
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 125 (261)
T PRK08265 52 ERARFIATDITDDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHL 125 (261)
T ss_pred CeeEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 46889999999853 444443 35799999998532 1 2344577889999999999887642
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
++-.++|++||...... .+ ....|+.||+..+.++++..
T Consensus 126 ~~~~g~ii~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~la-- 165 (261)
T PRK08265 126 ARGGGAIVNFTSISAKFA----------QT----------------------------GRWLYPASKAAIRQLTRSMA-- 165 (261)
T ss_pred hcCCcEEEEECchhhccC----------CC----------------------------CCchhHHHHHHHHHHHHHHH--
Confidence 22357999998653211 00 01259999999999987653
Q ss_pred ccccccccCCCceeEeccCccch
Q psy13944 694 ARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
++-...++.+..++|-.+..
T Consensus 166 ---~e~~~~gi~vn~v~PG~~~t 185 (261)
T PRK08265 166 ---MDLAPDGIRVNSVSPGWTWS 185 (261)
T ss_pred ---HHhcccCEEEEEEccCCccC
Confidence 11123467788888877653
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.017 Score=64.19 Aligned_cols=117 Identities=18% Similarity=0.169 Sum_probs=74.7
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccch---------hcHHHHHHHHHHHHHHHHHHHHh-c
Q psy13944 552 VVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKFD---------EHFQTAFEINCKGTEKLLKMAEE-M 614 (1217)
Q Consensus 552 ~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f~---------~~~~~~~~~NV~GT~nLLelA~~-~ 614 (1217)
.++.+|+++++ +++.+++ .+|+|||+|+..... +.++..+++|+.|+.++++.+.. +
T Consensus 54 ~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 127 (255)
T PRK06057 54 LFVPTDVTDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM 127 (255)
T ss_pred cEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 46789999854 3444433 579999999864321 23557888999999888877642 1
Q ss_pred --CCCcEEEEEccce-eecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 --KNLDSFIYVSTAY-SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 --~~lk~fV~vSTa~-v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||.. +++.. .....|+.||+..+.++....
T Consensus 128 ~~~~~g~iv~~sS~~~~~g~~--------------------------------------~~~~~Y~~sKaal~~~~~~l~ 169 (255)
T PRK06057 128 VRQGKGSIINTASFVAVMGSA--------------------------------------TSQISYTASKGGVLAMSRELG 169 (255)
T ss_pred HHhCCcEEEEEcchhhccCCC--------------------------------------CCCcchHHHHHHHHHHHHHHH
Confidence 1345789988853 23210 001259999987777765432
Q ss_pred ccccccccccCCCceeEeccCccchh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
++-...++.+..++|..|...
T Consensus 170 -----~~~~~~gi~v~~i~pg~v~t~ 190 (255)
T PRK06057 170 -----VQFARQGIRVNALCPGPVNTP 190 (255)
T ss_pred -----HHHHhhCcEEEEEeeCCcCCc
Confidence 111234788888899877533
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.022 Score=63.69 Aligned_cols=120 Identities=16% Similarity=0.114 Sum_probs=78.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc----h---hcHHHHHHHHHHHHHHHHHHHH-h
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAE-E 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f----~---~~~~~~~~~NV~GT~nLLelA~-~ 613 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+.... + +.++..+++|+.|...+...+. .
T Consensus 68 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 141 (256)
T PRK12859 68 VKVSSMELDLTQND------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARG 141 (256)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999854 343333 347999999996432 1 2344678999999998854443 2
Q ss_pred cC--CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 MK--NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~~--~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+. +-.+||++||...... . .....|+.||+..+.++++..
T Consensus 142 ~~~~~~g~iv~isS~~~~~~----------~----------------------------~~~~~Y~~sK~a~~~l~~~la 183 (256)
T PRK12859 142 FDKKSGGRIINMTSGQFQGP----------M----------------------------VGELAYAATKGAIDALTSSLA 183 (256)
T ss_pred HhhcCCeEEEEEcccccCCC----------C----------------------------CCchHHHHHHHHHHHHHHHHH
Confidence 21 2348999999754211 0 011369999999999987643
Q ss_pred ccccccccccCCCceeEeccCccchh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
++--..++.+..++|-++...
T Consensus 184 -----~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 184 -----AEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred -----HHhhhhCeEEEEEEEccccCC
Confidence 111234677888888887543
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.016 Score=67.44 Aligned_cols=122 Identities=14% Similarity=0.195 Sum_probs=79.8
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHH---hc--CccEEEEcCcccc-----c----hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVL---RE--DVNIVFHVAATVK-----F----DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L---~~--~vdvVfH~AA~v~-----f----~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
++..+..|+++. + .+..+.+ .. ++|++||+||... + .+.++..+++|+.|+.++.+.+...
T Consensus 105 ~~~~~~~Dl~~~-~---~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m 180 (320)
T PLN02780 105 QIKTVVVDFSGD-I---DEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGM 180 (320)
T ss_pred EEEEEEEECCCC-c---HHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 577888999852 1 1223322 23 3569999999642 1 1234468899999999999887631
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||....... +.| ....|+.||+..+.++.++.
T Consensus 181 ~~~~~g~IV~iSS~a~~~~~--------~~p----------------------------~~~~Y~aSKaal~~~~~~L~- 223 (320)
T PLN02780 181 LKRKKGAIINIGSGAAIVIP--------SDP----------------------------LYAVYAATKAYIDQFSRCLY- 223 (320)
T ss_pred HhcCCcEEEEEechhhccCC--------CCc----------------------------cchHHHHHHHHHHHHHHHHH-
Confidence 234589999997543210 001 11369999999999997754
Q ss_pred cccccccc-cCCCceeEeccCccchh
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
.++ ..++.+..+.|.+|.-.
T Consensus 224 -----~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 224 -----VEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred -----HHHhccCeEEEEEeeCceecC
Confidence 223 45788888899888633
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.028 Score=62.74 Aligned_cols=118 Identities=9% Similarity=0.097 Sum_probs=79.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+|+... + .+.+...+++|+.|+..+++.+...
T Consensus 69 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (262)
T PRK07831 69 GRVEAVVCDVTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRY 142 (262)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36889999999853 344433 35799999999532 1 1345567889999999998887642
Q ss_pred ---CC-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+ -.++|++||...... . .....|+.||+..|.+++++
T Consensus 143 ~~~~~~~g~iv~~ss~~~~~~----------~----------------------------~~~~~Y~~sKaal~~~~~~l 184 (262)
T PRK07831 143 MRARGHGGVIVNNASVLGWRA----------Q----------------------------HGQAHYAAAKAGVMALTRCS 184 (262)
T ss_pred HHhcCCCcEEEEeCchhhcCC----------C----------------------------CCCcchHHHHHHHHHHHHHH
Confidence 11 347888877543211 0 01125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccch
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
. .++ ..++.+..++|.++..
T Consensus 185 a------~e~~~~gI~v~~i~Pg~~~t 205 (262)
T PRK07831 185 A------LEAAEYGVRINAVAPSIAMH 205 (262)
T ss_pred H------HHhCccCeEEEEEeeCCccC
Confidence 4 222 3467788888877753
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.027 Score=63.45 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=75.7
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh---
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE--- 613 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~--- 613 (1217)
+.++.+|+++++ +.+.+. ..+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 52 ~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 125 (272)
T PRK07832 52 PEHRALDISDYD------AVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMV 125 (272)
T ss_pred ceEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 566789999854 333332 357999999985421 233457889999999999998753
Q ss_pred -cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 614 -MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 614 -~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+...++|++||...... .| ....|+.||+..+.++.+..
T Consensus 126 ~~~~~g~ii~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l~- 166 (272)
T PRK07832 126 AAGRGGHLVNVSSAAGLVA----------LP----------------------------WHAAYSASKFGLRGLSEVLR- 166 (272)
T ss_pred hCCCCcEEEEEccccccCC----------CC----------------------------CCcchHHHHHHHHHHHHHHH-
Confidence 112358999998643211 00 11259999997777765432
Q ss_pred cccccccccCCCceeEeccCccc
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+....++.+..++|..+-
T Consensus 167 ----~e~~~~~i~v~~v~Pg~v~ 185 (272)
T PRK07832 167 ----FDLARHGIGVSVVVPGAVK 185 (272)
T ss_pred ----HHhhhcCcEEEEEecCccc
Confidence 1122457888888888775
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.012 Score=64.55 Aligned_cols=119 Identities=10% Similarity=-0.002 Sum_probs=78.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHH-------hcCccEEEEcCccccc-----hhcHHHHHHHHHHHHHHHHHHHHhc-CC
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVL-------REDVNIVFHVAATVKF-----DEHFQTAFEINCKGTEKLLKMAEEM-KN 616 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L-------~~~vdvVfH~AA~v~f-----~~~~~~~~~~NV~GT~nLLelA~~~-~~ 616 (1217)
++.++.+|+++++ +.+.+ ...+|.|||+|+.... .+.+...+++|+.|..++++.+..+ .+
T Consensus 54 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 127 (238)
T PRK05786 54 NIHYVVGDVSSTE------SARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE 127 (238)
T ss_pred CeEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc
Confidence 5888999999864 23332 2357999999984321 1234467889999999988887753 12
Q ss_pred CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccc
Q psy13944 617 LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARS 696 (1217)
Q Consensus 617 lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~ 696 (1217)
-.+||++||...... + .+ ....|+.||+..+.+++++.+
T Consensus 128 ~~~iv~~ss~~~~~~--~-------~~----------------------------~~~~Y~~sK~~~~~~~~~~~~---- 166 (238)
T PRK05786 128 GSSIVLVSSMSGIYK--A-------SP----------------------------DQLSYAVAKAGLAKAVEILAS---- 166 (238)
T ss_pred CCEEEEEecchhccc--C-------CC----------------------------CchHHHHHHHHHHHHHHHHHH----
Confidence 247899888643110 0 00 012499999999988877641
Q ss_pred cccccCCCceeEeccCccch
Q psy13944 697 REKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 697 ~~~~~~~l~~~i~rp~~v~e 716 (1217)
+-...++++.+++|..|..
T Consensus 167 -~~~~~gi~v~~i~pg~v~~ 185 (238)
T PRK05786 167 -ELLGRGIRVNGIAPTTISG 185 (238)
T ss_pred -HHhhcCeEEEEEecCccCC
Confidence 1124579999999988753
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.02 Score=63.98 Aligned_cols=117 Identities=12% Similarity=0.018 Sum_probs=76.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---------c----hhcHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---------F----DEHFQTAFEINCKGTEKLL 608 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---------f----~~~~~~~~~~NV~GT~nLL 608 (1217)
.++.++.+|+++++ ++++++ ..+|++||+|+... + .+.+...+++|+.+...+.
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 132 (260)
T PRK08416 59 IKAKAYPLNILEPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGA 132 (260)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence 46889999999854 344333 35799999997431 1 1233467788988877766
Q ss_pred HHHHh-cC--CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHH
Q psy13944 609 KMAEE-MK--NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYI 685 (1217)
Q Consensus 609 elA~~-~~--~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~ 685 (1217)
+.+.. +. +-.++|++||...... .| ....|+.||+..|.
T Consensus 133 ~~~~~~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~ 174 (260)
T PRK08416 133 QEAAKRMEKVGGGSIISLSSTGNLVY----------IE----------------------------NYAGHGTSKAAVET 174 (260)
T ss_pred HHHHHhhhccCCEEEEEEeccccccC----------CC----------------------------CcccchhhHHHHHH
Confidence 55542 21 2358999998643211 00 11259999999999
Q ss_pred Hhhhhcccccccccc-cCCCceeEeccCccc
Q psy13944 686 ICLSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 686 lv~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++++. .++ ..++.+..+.|-++.
T Consensus 175 ~~~~la------~el~~~gi~v~~v~PG~i~ 199 (260)
T PRK08416 175 MVKYAA------TELGEKNIRVNAVSGGPID 199 (260)
T ss_pred HHHHHH------HHhhhhCeEEEEEeeCccc
Confidence 998764 233 346777778887774
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.012 Score=64.07 Aligned_cols=74 Identities=19% Similarity=0.293 Sum_probs=51.5
Q ss_pred EEEEcccCCCCCCCCHHHHHHHh--cCccEEEEcCcccc-chhc-HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 552 VVLTADLQSDGLGLDEKAKEVLR--EDVNIVFHVAATVK-FDEH-FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 552 ~~V~GDltd~~LGLs~~~~~~L~--~~vdvVfH~AA~v~-f~~~-~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
-+|..||.|.. .+++++ ..+|-.||..|..+ +.|. ...+.++|+.|..|+|+.|+++ +++-|| -||..
T Consensus 90 PyIy~DILD~K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV-PSTIG 161 (366)
T KOG2774|consen 90 PYIYLDILDQK------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV-PSTIG 161 (366)
T ss_pred Cchhhhhhccc------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee-ccccc
Confidence 35566776643 244443 35899999988644 3332 2357889999999999999997 676443 48998
Q ss_pred eecCcc
Q psy13944 628 SNCNIK 633 (1217)
Q Consensus 628 v~g~~~ 633 (1217)
++|+..
T Consensus 162 AFGPtS 167 (366)
T KOG2774|consen 162 AFGPTS 167 (366)
T ss_pred ccCCCC
Confidence 888743
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.034 Score=62.30 Aligned_cols=188 Identities=16% Similarity=0.110 Sum_probs=111.2
Q ss_pred ccCC--CCCCcccHHHHHHHHhcCh-h---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 10 HNGA--KTCKHNSILWVAKDFFADD-A---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 10 ~tg~--r~kkg~~~~eRL~~~l~~~-v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
+||+ .+.-|....++|.+..... + .+.+.++ ...++.++.+|++++ ++.+.++
T Consensus 12 ItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~------~~i~~~~~~~~~~ 82 (256)
T PRK07889 12 VTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKR---LPEPAPVLELDVTNE------EHLASLADRVREH 82 (256)
T ss_pred EeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHh---cCCCCcEEeCCCCCH------HHHHHHHHHHHHH
Confidence 6777 5667788888887632221 1 1112211 223577899999998 6665543
Q ss_pred -CCccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccC
Q psy13944 72 -EDVNIVFHVAATVK-------FD----EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 72 -~~VDiViH~AA~v~-------f~----e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
..+|++||+||... +. +.+...+++|+.|+..+.+.+.. +..-.++|++|+....+
T Consensus 83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~----------- 151 (256)
T PRK07889 83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA----------- 151 (256)
T ss_pred cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-----------
Confidence 45899999999752 21 12345789999999988887753 22213677776532100
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
.| . -..|+.||+.-+.+.+..+ .|+.+..+.|+.|-.+..+..+++
T Consensus 152 ~~---------------------------~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~- 202 (256)
T PRK07889 152 WP---------------------------A-YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF- 202 (256)
T ss_pred CC---------------------------c-cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-
Confidence 00 0 1358999999888776543 578888899998866543222111
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......+... .+ ..+.+...+|++++++.++..
T Consensus 203 ------~~~~~~~~~~----~p----~~~~~~~p~evA~~v~~l~s~ 235 (256)
T PRK07889 203 ------ELLEEGWDER----AP----LGWDVKDPTPVARAVVALLSD 235 (256)
T ss_pred ------HHHHHHHHhc----Cc----cccccCCHHHHHHHHHHHhCc
Confidence 1111111111 01 011356789999999877654
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.027 Score=62.90 Aligned_cols=118 Identities=16% Similarity=0.081 Sum_probs=75.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC-----------ccEEEEcCcccc-----ch-----hcHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED-----------VNIVFHVAATVK-----FD-----EHFQTAFEINCKGTEKL 607 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~-----------vdvVfH~AA~v~-----f~-----~~~~~~~~~NV~GT~nL 607 (1217)
.++.++.+|++++. +++.+++. .++|||+||... +. +.++..+++|+.|+..+
T Consensus 55 ~~v~~~~~Dl~~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~ 128 (256)
T TIGR01500 55 LRVVRVSLDLGAEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCL 128 (256)
T ss_pred ceEEEEEeccCCHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHH
Confidence 35889999999853 34433321 258999998532 11 23457889999999888
Q ss_pred HHHHHhc-C---C-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHH
Q psy13944 608 LKMAEEM-K---N-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNA 682 (1217)
Q Consensus 608 LelA~~~-~---~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~l 682 (1217)
.+.+... . + -.++|++||...... .| ....|+.||+.
T Consensus 129 ~~~~~~~l~~~~~~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa 170 (256)
T TIGR01500 129 TSSVLKAFKDSPGLNRTVVNISSLCAIQP----------FK----------------------------GWALYCAGKAA 170 (256)
T ss_pred HHHHHHHHhhcCCCCCEEEEECCHHhCCC----------CC----------------------------CchHHHHHHHH
Confidence 8776542 1 1 247999999754221 00 01259999999
Q ss_pred HHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 683 WYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 683 AE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.+.+++++. ++-...++.+..+.|-+|.
T Consensus 171 l~~l~~~la-----~e~~~~~i~v~~v~PG~v~ 198 (256)
T TIGR01500 171 RDMLFQVLA-----LEEKNPNVRVLNYAPGVLD 198 (256)
T ss_pred HHHHHHHHH-----HHhcCCCeEEEEecCCccc
Confidence 999997653 1112346777777787774
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.017 Score=63.02 Aligned_cols=120 Identities=15% Similarity=0.113 Sum_probs=76.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-----CccEEEEcCccccc---------hhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-----DVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAEEMK 615 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-----~vdvVfH~AA~v~f---------~~~~~~~~~~NV~GT~nLLelA~~~~ 615 (1217)
++.++.+|++|++ +++.+.+ ++|+|||+|+.... .+.+...+++|+.|+.++++.+...-
T Consensus 46 ~~~~~~~D~~d~~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (225)
T PRK08177 46 GVHIEKLDMNDPA------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQV 119 (225)
T ss_pred ccceEEcCCCCHH------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhh
Confidence 4677889999853 3444333 58999999986532 12334577889999999998886431
Q ss_pred --CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 616 --NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 616 --~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
+-..++++||.+..... ++ ...+ ..|+.||+..|.++.++.
T Consensus 120 ~~~~~~iv~~ss~~g~~~~---------~~-------------------------~~~~-~~Y~~sK~a~~~~~~~l~-- 162 (225)
T PRK08177 120 RPGQGVLAFMSSQLGSVEL---------PD-------------------------GGEM-PLYKASKAALNSMTRSFV-- 162 (225)
T ss_pred hhcCCEEEEEccCcccccc---------CC-------------------------CCCc-cchHHHHHHHHHHHHHHH--
Confidence 12467778775322110 00 0111 159999999999998764
Q ss_pred ccccccc-cCCCceeEeccCccch
Q psy13944 694 ARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 694 a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
+++ ..+..+..++|-++.-
T Consensus 163 ----~e~~~~~i~v~~i~PG~i~t 182 (225)
T PRK08177 163 ----AELGEPTLTVLSMHPGWVKT 182 (225)
T ss_pred ----HHhhcCCeEEEEEcCCceec
Confidence 222 2456677778877753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 9e-33
Identities = 53/256 (20%), Positives = 86/256 (33%), Gaps = 30/256 (11%)
Query: 26 KDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85
+ F + LR +R+ V+ D LGLD+ + L E V+++ AA V
Sbjct: 120 EKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVN 179
Query: 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145
+ F N GT +L+++A K L F YVSTA I+ F E +
Sbjct: 180 AFPY-HELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIE--PSAFTEDADIRVI 235
Query: 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDK--LPLGIVRPSIVMP 203
+ Y SK A E ++RE D LP+ + R +++
Sbjct: 236 SPT--------------RTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILA 281
Query: 204 VVEEPCPMWVKGMNGLTAMYV-AVGLGIM-------RTVYQNTSNIVDMVPGDLVVNILL 255
+ + +T M + + GI + D +P V +
Sbjct: 282 DTSY--AGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIA 339
Query: 256 AAAWDVARRVKKLDTI 271
VA
Sbjct: 340 VLGARVAGSSLAGFAT 355
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 99.6 bits (248), Expect = 8e-22
Identities = 39/156 (25%), Positives = 56/156 (35%), Gaps = 18/156 (11%)
Query: 525 KSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVA 584
+ RL F +LLR +R+ V+ D LGLD+ L E V+++ A
Sbjct: 116 RRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSA 175
Query: 585 ATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 644
A V + F N GT +L+++A K L F YVSTA I+ F E
Sbjct: 176 AMVNAFPY-HELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIE--PSAFTEDAD 231
Query: 645 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSK 680
+ + Y SK
Sbjct: 232 IRVISPT--------------RTVDGGWAGGYGTSK 253
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.8 bits (175), Expect = 1e-12
Identities = 90/665 (13%), Positives = 194/665 (29%), Gaps = 212/665 (31%)
Query: 304 NHGNYDT-TNHVNYIKQNIKEKFIDKYNNNVPDTDDSFKMSTQTQNLAD---SVISNQSV 359
+H + D T Y +Y + + +D+F + +++ D S++S + +
Sbjct: 3 HHHHMDFETGEHQY-----------QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI 51
Query: 360 SNKSNGEHSD-RIYHMVSCVENPIALGKSTELTIYYSNQAKEGCEKSL-----WC---IH 410
+ + + + + + ++ E+ L + I
Sbjct: 52 DHIIMSKDAVSGTLRLFWTLLS------------KQEEMVQKFVEEVLRINYKFLMSPIK 99
Query: 411 HNPTGKKWLYFTYFY----LYNLLPTLV-FFVF-----------LEKL------------ 442
+ Y LYN + V L +L
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL 159
Query: 443 -SGK----------KAQLMKIYRKVFFLNTTIANFSINEWSFTNDNALKLFNTLNSKDRK 491
SGK K+ K+F+LN + N + + L++ L +
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLN--LKN------CNSPETVLEMLQKLLYQIDP 211
Query: 492 MFGFSMKKVSWLFFHLNLHRSLSKYAIHVPDLTKSRLRDFFADDAF--DLLRKENV---- 545
+ + S + + + ++ LR + LL NV
Sbjct: 212 NW-------------TSRSDHSSNIKLRIHSI-QAELRRLLKSKPYENCLLVLLNVQNAK 257
Query: 546 -----NFTERIVVLTADLQ------------------SDGLGLDEKAKEVLREDVNIVFH 582
N + +I++ T Q S L DE K +L + ++
Sbjct: 258 AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE-VKSLLLKYLDCRPQ 316
Query: 583 ----------------VAATVK-FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625
+A +++ + +NC +++ + + L+ Y
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS--LNVLEPAEY-RK 373
Query: 626 AYSNCNI----KKIEEKFYEPLYTHI---EMEQIINSCSHTELTVLNDILIKPMPNTYTL 678
+ ++ I ++ + ++ ++N L++ P T+
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL-------HKYSLVEKQPKESTI 426
Query: 679 SKNAWYIICLSFWGCARSREKCSHDRGV-RVCRNHPVGETIADNRHQQNLHPLSRQEYIF 737
S + Y+ + K ++ + R +H I +L P +Y +
Sbjct: 427 SIPSIYL---------ELKVKLENEYALHRSIVDH---YNIPKTFDSDDLIPPYLDQYFY 474
Query: 738 SDTG------------CFFSINLHSLCMIEKKVQPNINTTLPYSVALTVSTNTSDKTMGN 785
S G F + +E+K+ + + ++ + ++
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI---RHDSTAWNASGSILNTLQQ----- 526
Query: 786 NSVHGSLKRRRKKSIEEITD-DPFKSEENAPQTILDFYDKRDEDALSDKL-----IEFDA 839
LK + I D DP E ILDF K +E+ + K I A
Sbjct: 527 ------LKFYKPY----ICDNDP--KYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
Query: 840 EESEI 844
E+ I
Sbjct: 575 EDEAI 579
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 2e-07
Identities = 96/695 (13%), Positives = 178/695 (25%), Gaps = 231/695 (33%)
Query: 506 HLNLHRSLSKYAIH--VPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGL 563
H++ +Y + + + +F D D+ + +L+
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS----------ILS-------- 47
Query: 564 GLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINC---KGTEKLLKMAEEMKNLD-S 619
E+ ++ D T K E + K EE+ ++
Sbjct: 48 --KEEIDHIIMSK-------------DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92
Query: 620 FIYVSTAYSNCNIKKIEEKFY----EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNT 675
F+ + + Y + LY ++ N L L++
Sbjct: 93 FLMSPIKTE-QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE----- 146
Query: 676 YTLSKNAWYII---------CLSFWGCARSREKCSHDRGV-----RVCRNHPVGETIADN 721
L +I ++ C + +C D + + C + ET+ +
Sbjct: 147 --LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP---ETVLEM 201
Query: 722 RHQQNLHPLSRQEY-IFSDTGCFFSINLHSLCMIEKKVQPNINTTLPYSVALTVSTNTSD 780
Q L + SD + +HS+ + + + PY L V N +
Sbjct: 202 --LQKLLYQIDPNWTSRSDHSSNIKLRIHSI----QAELRRLLKSKPYENCLLVLLNVQN 255
Query: 781 K--------------TMGNNSVHGSL--KRRRKKSIEEITDDPFKSEEN----------- 813
T V L S++ +E
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH-SMTLTPDEVKSLLLKYLDCR 314
Query: 814 -----------APQTILDFYDK-RDEDALSD--KLIEFDAEESEIQAFYKVVEEPCPMWV 859
P+ + + RD A D K + D + I++ V+E
Sbjct: 315 PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA----- 369
Query: 860 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNI---LLAAAWDVARRVKKLDT 916
R ++ S + P +I LL+ W D
Sbjct: 370 ----------------EYRKMFDRLS----VFPPS--AHIPTILLSLIWF--------DV 399
Query: 917 ITRSDQNVEAKLIDPNNNVEEESIKKLDVN---YEINHGNYDTTNHVNYIKQNIKEKFID 973
I V KL S+ + I + + + +D
Sbjct: 400 IKSDVMVVVNKLHK-------YSLVEKQPKESTISIPSIYLELKVKLENEYA-LHRSIVD 451
Query: 974 KYNNNVPDTDDSFKMSTQTQNLADSVISNQSVSNKSNGEHSDRI-YHMVSCVENPIALGK 1032
Y N+P T DS + D + H I +H+ + E+P +
Sbjct: 452 HY--NIPKTFDSDDLIPPY---LDQYFYS----------H---IGHHLKNI-EHP---ER 489
Query: 1033 STELTIYYSN----QAKEGCEKSLWCIHHNPTGKKWLYFTYFYLYNLLPTLVFFVFLEKL 1088
T + + + + K I H W +L TL
Sbjct: 490 MTLFRMVFLDFRFLEQK---------IRH--DSTAWNASGS-----ILNTL--------- 524
Query: 1089 SGKKAQLMKIYRKVFFLN--------TTIANFSIN 1115
Q +K Y+ N I +F
Sbjct: 525 -----QQLKFYKPYICDNDPKYERLVNAILDFLPK 554
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 8e-05
Identities = 72/502 (14%), Positives = 137/502 (27%), Gaps = 170/502 (33%)
Query: 14 KTCKHNSILW--VAKDFFADDAFDRLRK----------ENANFTERIVVLTADLQS--DG 59
+ I W + + + L+K ++ + I + +Q+
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 60 LGLDEKEKK---VLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDS 116
L + + VL +V A F ++CK
Sbjct: 237 LLKSKPYENCLLVLL-NVQNAKAWNA-----------FNLSCK----------------- 267
Query: 117 FIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTE-LTVLNDIL-IKPMPNTYT 174
I ++T + K++ + THI ++ + + E ++L L +P
Sbjct: 268 -ILLTTRF-----KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP----QD 317
Query: 175 LSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMW-----VKGMNGLTAMYVAVGL- 228
L + P + SI+ + + W V T + ++ +
Sbjct: 318 LPREVL--------TTNPRRL---SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 229 --GIMRTVYQNTSNIVDMVPGDLVVNI---LLAAAWDVARRVKKLDTITRSDQNVEAKLI 283
R ++ S + P +I LL+ W D I V KL
Sbjct: 367 EPAEYRKMFDRLS----VFPPS--AHIPTILLSLIWF--------DVIKSDVMVVVNKLH 412
Query: 284 DPNNNVEEESIKKLDVN---YEINHGNYDTTNHVNYIKQNIKEKFIDKYNNNVPDTDDSF 340
S+ + I + + + +D Y N+P T DS
Sbjct: 413 K-------YSLVEKQPKESTISIPSIYLELKVKLENEYA-LHRSIVDHY--NIPKTFDSD 462
Query: 341 KMSTQTQNLADSVISNQSVSNKSNGEHSDRI-YHMVSCVENPIALGKSTELTIYYSN--- 396
+ D + H I +H+ + E+P + T + + +
Sbjct: 463 DLIPPY---LDQYFYS----------H---IGHHLKNI-EHP---ERMTLFRMVFLDFRF 502
Query: 397 -QAKEGCEKSLWCIHHNPTGKKWLYFTYFYLYNLLPTLVFFVFLEKLSGKKAQLMKIYRK 455
+ K I H W +L TL Q +K Y+
Sbjct: 503 LEQK---------IRH--DSTAWNASGS-----ILNTL--------------QQLKFYKP 532
Query: 456 VFFLN--------TTIANFSIN 469
N I +F
Sbjct: 533 YICDNDPKYERLVNAILDFLPK 554
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 7e-11
Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 43/192 (22%)
Query: 72 EDVNIVFHVAATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST--AYSNCN 128
++ V A +Q T + + + +YV + A
Sbjct: 76 RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHP 134
Query: 129 IKKI--EEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVRE 186
E FY+ L ++Y L K A ++ RE
Sbjct: 135 QGLPGHEGLFYDSL--------------------------PSGKSSYVLCKWALDEQARE 168
Query: 187 KMDK-LPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMV 245
+ LP+ I P +V+ + + + A+G G M N++D
Sbjct: 169 QARNGLPVVIGIPGMVL------GELDIG--PTTGRVITAIGNGEMTHYVAGQRNVIDA- 219
Query: 246 PGDLVVNILLAA 257
+ +L+A
Sbjct: 220 -AEAGRGLLMAL 230
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 4e-05
Identities = 7/53 (13%), Positives = 15/53 (28%), Gaps = 2/53 (3%)
Query: 575 EDVNIVFHVAATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626
++ V A +Q T + + + +YV +A
Sbjct: 76 RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSA 127
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 45/293 (15%), Positives = 98/293 (33%), Gaps = 79/293 (26%)
Query: 33 AFDRLRKENANFTERIVVLTADLQSDGLGLDEK--EKKVLREDVNIVFHVAA--TVKFDE 88
A D ++++ +T D+ + ++ V + ++ +FH+A + K ++
Sbjct: 30 ASDIVQRDTGGIK----FITLDV------SNRDEIDRAVEKYSIDAIFHLAGILSAKGEK 79
Query: 89 HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA---YSNCNIKKIEEKFYEPLYTHIE 145
A+++N GT +L+ A++ ++ + ST K+
Sbjct: 80 DPALAYKVNMNGTYNILEAAKQ-HRVEKVVIPSTIGVFGPETPKNKVP------------ 126
Query: 146 MEQIINSCSHTELTVLNDILIKPMPNT-YTLSKNACEQMVREKMDK--LPLGIVRPSIVM 202
+T+ P T + ++K A E + + +K L + +R ++
Sbjct: 127 -----------SITITR-------PRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168
Query: 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGIMR--------TVYQNTSNIVDMV-PGDLVVNI 253
EP T Y I Y + + M+ D + +
Sbjct: 169 SYKAEP--------TAGTTDYAV---EIFYYAVKREKYKCYLAPNRALPMMYMPDALKAL 217
Query: 254 LLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG 306
+ D + R+ NV A P+ + IK+ +EI +
Sbjct: 218 VDLYEADRD------KLVLRNGYNVTAYTFTPSELYSK--IKERIPEFEIEYK 262
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 9e-04
Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 38/140 (27%)
Query: 62 LDEKEKKVLREDVNIVFHVAA---TVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFI 118
L + DV +FH A T ++D + + N + +++LL ++ F+
Sbjct: 104 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYC--LEREIPFL 159
Query: 119 YVSTA--YSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLS 176
Y S+A Y IE KP+ N + S
Sbjct: 160 YASSAATYGGRTSDFIES----------------------------REYEKPL-NVFGYS 190
Query: 177 KNACEQMVREKMDKLPLGIV 196
K ++ VR+ + + IV
Sbjct: 191 KFLFDEYVRQILPEANSQIV 210
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1217 | |||
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.87 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.87 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.87 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.87 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.86 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.85 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.84 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.84 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.84 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.84 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.84 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.83 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.83 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.83 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.83 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.83 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.83 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.82 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.82 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.82 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.82 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.82 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.81 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.81 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.81 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.81 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.8 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.8 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.8 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.8 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.79 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.79 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.79 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.79 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.78 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.78 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.77 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.77 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.77 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.77 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.77 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.76 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.76 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.75 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.75 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.74 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.74 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.74 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.74 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.74 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.73 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.72 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.72 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.72 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.72 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.71 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.71 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.71 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.71 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.71 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.7 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.69 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.69 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.68 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.64 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.64 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.64 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.63 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.63 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.62 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.6 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.58 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.56 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.56 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.55 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.55 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.54 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.54 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.53 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.52 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.52 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.5 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.49 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.49 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.49 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.49 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.49 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.49 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.48 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.48 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.48 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.48 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.47 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.47 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.47 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.46 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.46 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.45 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.45 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.45 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.44 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.44 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.43 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.42 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.42 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.41 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.41 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.39 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.39 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.39 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.38 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.37 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.37 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.36 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.35 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.35 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.34 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.34 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.34 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.33 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.33 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.33 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.32 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.32 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.32 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.32 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.31 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.29 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.28 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.28 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.27 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.27 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.26 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.25 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.25 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.25 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.25 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.24 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.23 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.23 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.22 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.22 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.21 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.19 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.17 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.16 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.16 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.14 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.14 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.14 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.13 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.13 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.12 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.11 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.1 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.09 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.09 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.07 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.06 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.03 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.03 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.02 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.99 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 98.99 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.99 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.98 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.98 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 98.97 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.96 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.96 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.96 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.95 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.95 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 98.94 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.93 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.91 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.9 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.9 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.89 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.89 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 98.88 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.88 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.88 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 98.87 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.87 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.87 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.86 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.86 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.86 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.85 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.83 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.82 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.81 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.8 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 98.79 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.79 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.78 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 98.78 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.78 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.77 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.77 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.76 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.76 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.76 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.76 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.76 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.75 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.75 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.74 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.74 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 98.73 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.73 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.72 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.72 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.71 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.71 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.71 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.7 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.7 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.7 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.69 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.69 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.69 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.69 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.68 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.68 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.67 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.67 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.67 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.67 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.67 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.66 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.66 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.66 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.66 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.65 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.65 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.65 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.65 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.65 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.65 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.65 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.64 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.64 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.64 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.64 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.64 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.63 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.63 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.62 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.62 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.62 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.62 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 98.62 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.62 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.61 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.61 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.61 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.61 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.61 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.61 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.6 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.6 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.59 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.59 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.59 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.59 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.58 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.58 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.58 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.58 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 98.57 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.57 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 98.57 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.57 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.57 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.57 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.57 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.57 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.56 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.56 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.56 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.56 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.56 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.56 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.55 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.55 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 98.54 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 98.54 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.54 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.54 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.54 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.53 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.52 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.52 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.52 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.52 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.52 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.51 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.51 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.51 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.51 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.5 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.5 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.49 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 98.49 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.49 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.49 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.49 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.48 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.48 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.47 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.46 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.46 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.46 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.46 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.46 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.46 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.46 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 98.46 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.45 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.45 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.45 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 98.44 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.44 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.44 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.44 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.43 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.41 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.4 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.4 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.39 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.39 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.38 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.37 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.35 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.33 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.32 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.31 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.3 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.3 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.29 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 98.29 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.27 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.27 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.26 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.26 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.26 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 98.23 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 98.22 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.21 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.21 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.21 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.21 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 98.2 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.2 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.2 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.19 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 98.17 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.17 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.17 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 98.15 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.14 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.13 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.11 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.09 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.09 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.08 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.08 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.08 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.08 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.07 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.07 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.05 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.04 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.04 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 98.04 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.04 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.03 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.03 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.03 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.01 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.0 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 97.98 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 97.98 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 97.97 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.97 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 97.97 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 97.96 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 97.96 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 97.96 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 97.96 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 97.95 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 97.95 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 97.95 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.95 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 97.94 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.94 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 97.94 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 97.93 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 97.93 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 97.93 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 97.93 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 97.93 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 97.92 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.92 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 97.91 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 97.9 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 97.9 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 97.9 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.89 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 97.89 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.89 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 97.89 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.89 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 97.88 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 97.88 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 97.88 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 97.88 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 97.88 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 97.87 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 97.87 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 97.87 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.87 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 97.86 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 97.86 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 97.85 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.85 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 97.84 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.84 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.84 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 97.83 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 97.83 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 97.83 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 97.83 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 97.83 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 97.83 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 97.82 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 97.82 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 97.81 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 97.8 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 97.8 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.8 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 97.79 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 97.78 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 97.77 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 97.77 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.76 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 97.76 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 97.76 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.76 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 97.75 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 97.75 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 97.75 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 97.74 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 97.74 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 97.74 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 97.74 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 97.74 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 97.74 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 97.73 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 97.72 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 97.72 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 97.71 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.71 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.7 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 97.7 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 97.7 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 97.69 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.68 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 97.68 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 97.68 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 97.68 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.67 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.67 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 97.67 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.67 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 97.67 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 97.66 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.66 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.66 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 97.66 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.65 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.65 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 97.65 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 97.65 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.65 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 97.65 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 97.65 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.65 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 97.65 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.64 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 97.64 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 97.63 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 97.63 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 97.63 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.63 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 97.63 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 97.62 |
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-22 Score=223.04 Aligned_cols=240 Identities=13% Similarity=0.052 Sum_probs=180.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiViH~AA~v~ 85 (1217)
.-+||+.+.-|..+.++|.+... + .......+..+.+|++++ +++..++++ +|+|||+||.+.
T Consensus 9 vlVtGatG~iG~~l~~~L~~~g~-------~--~~~~~~~~~~~~~D~~d~------~~~~~~~~~~~~d~Vih~A~~~~ 73 (319)
T 4b8w_A 9 ILVTGGSGLVGKAIQKVVADGAG-------L--PGEDWVFVSSKDADLTDT------AQTRALFEKVQPTHVIHLAAMVG 73 (319)
T ss_dssp EEEETCSSHHHHHHHHHHHTTTC-------C--TTCEEEECCTTTCCTTSH------HHHHHHHHHSCCSEEEECCCCCC
T ss_pred EEEECCCcHHHHHHHHHHHhcCC-------c--ccccccccCceecccCCH------HHHHHHHhhcCCCEEEECceecc
Confidence 45789999999988888876432 0 011122344567999987 888888876 999999999865
Q ss_pred ----cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 86 ----FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 86 ----f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
..+.....+++|+.||.+++++|++. ++++|||+||+++||.... ++|+....
T Consensus 74 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-------------------- 132 (319)
T 4b8w_A 74 GLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTCIFPDKTTYPIDETMIHN-------------------- 132 (319)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSCSSCCSSBCGGGGGB--------------------
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchhhcCCCCCCCcccccccc--------------------
Confidence 23566788999999999999999985 7899999999999986532 33332100
Q ss_pred ccccccCCCCC-C-hHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH----HhcCce
Q psy13944 160 VLNDILIKPMP-N-TYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA----VGLGIM 231 (1217)
Q Consensus 160 ~~tp~~~~~~P-N-tYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~----~~~G~l 231 (1217)
....| + .|+.||+++|++++.++ .+++++|+||+.|||+...+..+. ......++.. +..|..
T Consensus 133 ------~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 203 (319)
T 4b8w_A 133 ------GPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIED---GHVLPGLIHKVHLAKSSGSA 203 (319)
T ss_dssp ------SCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTT---SCHHHHHHHHHHHHHHHTCC
T ss_pred ------CCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCcc---ccccHHHHHHHHHHhccCCc
Confidence 01112 3 59999999999998876 689999999999999987543211 1122233333 667777
Q ss_pred eEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCc
Q psy13944 232 RTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDT 310 (1217)
Q Consensus 232 ~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~ 310 (1217)
..++++++..+++|||||+|++++.++.+... . .++.||++++ +++.
T Consensus 204 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~----~----------------------------~~~~~ni~~~~~~s~ 251 (319)
T 4b8w_A 204 LTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE----V----------------------------EPIILSVGEEDEVSI 251 (319)
T ss_dssp EEEESCSCCEECEEEHHHHHHHHHHHHHHCCC----S----------------------------SCEEECCCGGGCEEH
T ss_pred eEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc----C----------------------------CceEEEecCCCceeH
Confidence 77889999999999999999999998876332 1 2568999988 9999
Q ss_pred hHHHHHHHHhhchh
Q psy13944 311 TNHVNYIKQNIKEK 324 (1217)
Q Consensus 311 ~el~~~ia~~~g~~ 324 (1217)
.|+++.+++.+|.+
T Consensus 252 ~e~~~~i~~~~g~~ 265 (319)
T 4b8w_A 252 KEAAEAVVEAMDFH 265 (319)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999865
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-22 Score=227.07 Aligned_cols=240 Identities=14% Similarity=0.108 Sum_probs=184.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhc---C----cc--cCCCeEEEEccCCCCCCCCCHHHHHHhcCC--cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKE---N----AN--FTERIVVLTADLQSDGLGLDEKEKKVLRED--VN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~---~----p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VD 75 (1217)
.-+||+.+.-|..+.++|.+.... .+...-+.. . .. ...+++++.||++++ +++..++++ +|
T Consensus 27 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d 100 (346)
T 4egb_A 27 ILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNG------ELLEHVIKERDVQ 100 (346)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCH------HHHHHHHHHHTCC
T ss_pred EEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCH------HHHHHHHhhcCCC
Confidence 458999999999999999886421 222111100 0 00 125899999999998 888888887 99
Q ss_pred EEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cccccccCCCCChHHHHHH
Q psy13944 76 IVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 76 iViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~dp~~~~~~ 149 (1217)
+|||+||..... +....++++|+.||.+++++|++. ++++|||+||+++|+... .++|+...
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~~~~~~~E~~~~----------- 168 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLGKTGRFTEETPL----------- 168 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCCSSCCBCTTSCC-----------
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCCcCCCcCCCCCC-----------
Confidence 999999987544 445578999999999999999995 789999999999998752 23332211
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
...+.|+.||+++|++++.++ .+++++|+||+.|||+...+. .....++..+.
T Consensus 169 ------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~ 223 (346)
T 4egb_A 169 ------------------APNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-------KLIPLMVTNAL 223 (346)
T ss_dssp ------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHH
T ss_pred ------------------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-------chHHHHHHHHH
Confidence 112679999999999999876 599999999999999976431 22345667777
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|....++++++..+++|||||+|++++.++..... ++.||++++
T Consensus 224 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~----------------------------------g~~~~i~~~~ 269 (346)
T 4egb_A 224 EGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV----------------------------------GEVYNIGGNN 269 (346)
T ss_dssp TTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCT----------------------------------TCEEEECCSC
T ss_pred cCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCC----------------------------------CCEEEECCCC
Confidence 787667788999999999999999999988875433 678999998
Q ss_pred ccCchHHHHHHHHhhchh
Q psy13944 307 NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~ 324 (1217)
+++..|+++.+++.+|.+
T Consensus 270 ~~s~~e~~~~i~~~~g~~ 287 (346)
T 4egb_A 270 EKTNVEVVEQIITLLGKT 287 (346)
T ss_dssp CEEHHHHHHHHHHHHTCC
T ss_pred ceeHHHHHHHHHHHhCCC
Confidence 799999999999999875
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8e-22 Score=225.78 Aligned_cols=245 Identities=14% Similarity=0.064 Sum_probs=188.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc--------------ccCCCeEEEEccCCCCCCCCCHHHHHHhcCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA--------------NFTERIVVLTADLQSDGLGLDEKEKKVLRED 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p--------------~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~ 73 (1217)
.-+||+.+.-|..+.++|.+... .+....|...+ ....+++++.||++++ +++..++++
T Consensus 28 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~ 100 (351)
T 3ruf_A 28 WLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL------TTCEQVMKG 100 (351)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH------HHHHHHTTT
T ss_pred EEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH------HHHHHHhcC
Confidence 45899999999999999987422 22111111000 0016899999999998 899999999
Q ss_pred ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHH
Q psy13944 74 VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 74 VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~ 148 (1217)
+|+|||+||..... ......+++|+.||.+++++|++. ++++|||+||+++||.... ++|+...
T Consensus 101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~---------- 169 (351)
T 3ruf_A 101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPALPKVEENIG---------- 169 (351)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCC----------
T ss_pred CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCCCCCccCCCC----------
Confidence 99999999986543 345678999999999999999985 7899999999999986542 3332211
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHH
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV 226 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~ 226 (1217)
...+.|+.||+.+|++++.+. .+++++|+||+.|||+...+...+. .....++..+
T Consensus 170 -------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~ 227 (351)
T 3ruf_A 170 -------------------NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYA---AVIPKWTAAM 227 (351)
T ss_dssp -------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTC---CHHHHHHHHH
T ss_pred -------------------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchh---hHHHHHHHHH
Confidence 112679999999999999876 5899999999999999875532111 1234566677
Q ss_pred hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC
Q psy13944 227 GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG 306 (1217)
Q Consensus 227 ~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg 306 (1217)
..|....++++++..+++|||||+|++++.++..... ..++.||++++
T Consensus 228 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~--------------------------------~~~~~~ni~~~ 275 (351)
T 3ruf_A 228 LKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDS--------------------------------AKDNIYNVAVG 275 (351)
T ss_dssp HHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG--------------------------------GCSEEEEESCS
T ss_pred HcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc--------------------------------cCCCEEEeCCC
Confidence 7787777889999999999999999999988875211 02788999998
Q ss_pred -ccCchHHHHHHHHhhchh
Q psy13944 307 -NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 -~~s~~el~~~ia~~~g~~ 324 (1217)
+++..|+++.+++.+|..
T Consensus 276 ~~~s~~e~~~~i~~~~g~~ 294 (351)
T 3ruf_A 276 DRTTLNELSGYIYDELNLI 294 (351)
T ss_dssp CCEEHHHHHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHhCcc
Confidence 899999999999999873
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-22 Score=222.91 Aligned_cols=237 Identities=17% Similarity=0.088 Sum_probs=185.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhh-cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRK-ENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~-~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
.-+||+.+.-|..+.++|.+-.. .+.-..|. .... ..+++++.+|++ + +++..+++++|+|||+||....
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~~~~~~~~Dl~-~------~~~~~~~~~~d~Vih~a~~~~~ 75 (311)
T 3m2p_A 5 IAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-INDYEYRVSDYT-L------EDLINQLNDVDAVVHLAATRGS 75 (311)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC------CCEEEECCCC-H------HHHHHHTTTCSEEEECCCCCCS
T ss_pred EEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CCceEEEEcccc-H------HHHHHhhcCCCEEEEccccCCC
Confidence 45789999999999999987522 22221122 1112 448999999999 8 8999999999999999998876
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 87 ~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
. .....+++|+.||.+++++|++. ++++|||+||+++|+... .++|+....
T Consensus 76 ~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~~~~~E~~~~~------------------------- 128 (311)
T 3m2p_A 76 Q-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETSLPWNEKELPL------------------------- 128 (311)
T ss_dssp S-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGGCSBCTTSCCC-------------------------
T ss_pred C-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCCCCC-------------------------
Confidence 5 44568899999999999999985 789999999999998653 133332111
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee
Q psy13944 165 LIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV 242 (1217)
Q Consensus 165 ~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~ 242 (1217)
..+.|+.||+++|+++++++ .+++++|+||+.|||+...+. .....++..+..|....++++++..+
T Consensus 129 ----p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~ 197 (311)
T 3m2p_A 129 ----PDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKR 197 (311)
T ss_dssp ----CSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCE
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEE
Confidence 12679999999999999886 699999999999999976432 23356677777787777888999999
Q ss_pred ccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhh
Q psy13944 243 DMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNI 321 (1217)
Q Consensus 243 D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~ 321 (1217)
++|+|||+|++++.++.+... ++.||++++ +++..|+++.+++.+
T Consensus 198 ~~v~v~Dva~a~~~~~~~~~~----------------------------------~~~~~i~~~~~~s~~e~~~~i~~~~ 243 (311)
T 3m2p_A 198 EFLYAKDAAKSVIYALKQEKV----------------------------------SGTFNIGSGDALTNYEVANTINNAF 243 (311)
T ss_dssp EEEEHHHHHHHHHHHTTCTTC----------------------------------CEEEEECCSCEECHHHHHHHHHHHT
T ss_pred ceEEHHHHHHHHHHHHhcCCC----------------------------------CCeEEeCCCCcccHHHHHHHHHHHh
Confidence 999999999999887754322 678999988 899999999999999
Q ss_pred chhh
Q psy13944 322 KEKF 325 (1217)
Q Consensus 322 g~~~ 325 (1217)
|.+.
T Consensus 244 g~~~ 247 (311)
T 3m2p_A 244 GNKD 247 (311)
T ss_dssp TCTT
T ss_pred CCCC
Confidence 8763
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=217.73 Aligned_cols=250 Identities=15% Similarity=0.096 Sum_probs=182.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcC--------cccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKEN--------ANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~--------p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDi 76 (1217)
.-+||+.+.-|..+.++|.+.... .+.++..+.. .....++.++.+|++++ +++..+++ ++|+
T Consensus 8 vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 8 ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDE------RALARIFDAHPITA 81 (341)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCH------HHHHHHHHHSCCCE
T ss_pred EEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCH------HHHHHHHhccCCcE
Confidence 558999999999999999874321 1111100000 01135789999999998 88888887 8999
Q ss_pred EEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhh
Q psy13944 77 VFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 77 ViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~ 151 (1217)
|||+||.... .+.....+++|+.|+.+++++|++. ++++|||+||+.+||.... ++|.....
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~~~~------------ 148 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATVYGVPERSPIDETFPLS------------ 148 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGBCSCSSSSBCTTSCCB------------
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceEecCCCCCCCCCCCCCC------------
Confidence 9999998754 2345578999999999999999984 7889999999999986432 33322111
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCccccccc--chhHHHHHHH
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKGM--NGLTAMYVAV 226 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn~--~g~~~li~~~ 226 (1217)
..+.|+.||+++|++++.++ .+++++++||++|||+......|..... ......+...
T Consensus 149 -----------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 211 (341)
T 3enk_A 149 -----------------ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQV 211 (341)
T ss_dssp -----------------CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHH
T ss_pred -----------------CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHH
Confidence 12679999999999998875 4599999999999999765443432211 1222334443
Q ss_pred hcC--ceeEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcc
Q psy13944 227 GLG--IMRTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLD 298 (1217)
Q Consensus 227 ~~G--~l~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g 298 (1217)
..| ....++| ++++.+|+|||||+|++++.++..... . ..+
T Consensus 212 ~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~----~---------------------------~~~ 260 (341)
T 3enk_A 212 AVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALER----R---------------------------DAS 260 (341)
T ss_dssp HHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHH----H---------------------------TSC
T ss_pred HhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhc----C---------------------------Ccc
Confidence 444 3334556 789999999999999999988876432 0 127
Q ss_pred ceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 299 VNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 299 ~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
+.||++++ +++..|+++.+++.+|.+
T Consensus 261 ~~~ni~~~~~~s~~e~~~~i~~~~g~~ 287 (341)
T 3enk_A 261 LTVNLGTGRGYSVLEVVRAFEKASGRA 287 (341)
T ss_dssp EEEEESCSCCEEHHHHHHHHHHHHCSC
T ss_pred eEEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 78999988 899999999999999865
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=223.86 Aligned_cols=256 Identities=12% Similarity=0.076 Sum_probs=191.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--cc--cCCCeEEEEccCC-CCCCCCCHHHHHHhcCCccEEEEcCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--AN--FTERIVVLTADLQ-SDGLGLDEKEKKVLREDVNIVFHVAA 82 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--p~--~~~kI~~V~GDl~-d~~LGLs~edl~~L~~~VDiViH~AA 82 (1217)
.-+||+.+.-|..+.++|.+.-...+.-..|... .. ...+++++.||++ ++ +.+..+++++|+|||+||
T Consensus 27 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~------~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 27 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINK------EWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp EEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCH------HHHHHHHHHCSEEEECBC
T ss_pred EEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCH------HHHHHHhccCCEEEEcCc
Confidence 4589999999999999998762222222112111 11 1368999999999 76 788888889999999999
Q ss_pred cCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccc
Q psy13944 83 TVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTE 157 (1217)
Q Consensus 83 ~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~ 157 (1217)
..... +.....+++|+.||.+++++|++. + ++|||+||+++||.... +.|+..+.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~--------------- 163 (372)
T 3slg_A 101 IATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCADEQFDPDASALTYG--------------- 163 (372)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBSCCCSSBCTTTCCEEEC---------------
T ss_pred cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCCCCCCCCCccccccccC---------------
Confidence 87643 356678899999999999999986 4 89999999999987432 33322111000
Q ss_pred ccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccc-hhHHHHHHHhcCceeEEe
Q psy13944 158 LTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMN-GLTAMYVAVGLGIMRTVY 235 (1217)
Q Consensus 158 ~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~-g~~~li~~~~~G~l~~i~ 235 (1217)
| .....+.|+.||+++|++++.++ .+++++|+||+.|||+...+..++..... ....++..+..|....++
T Consensus 164 -----p--~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (372)
T 3slg_A 164 -----P--INKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLV 236 (372)
T ss_dssp -----C--TTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEG
T ss_pred -----C--CCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEe
Confidence 0 00112479999999999999987 48999999999999998765333222222 234566677788777788
Q ss_pred eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccC-C-ccCchHH
Q psy13944 236 QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINH-G-NYDTTNH 313 (1217)
Q Consensus 236 g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~s-g-~~s~~el 313 (1217)
++++..+++|||+|+|++++.++..... . ..++.||+++ + +++..|+
T Consensus 237 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~----~---------------------------~~~~~~ni~~~~~~~s~~e~ 285 (372)
T 3slg_A 237 DGGSQKRAFTYVDDGISALMKIIENSNG----V---------------------------ATGKIYNIGNPNNNFSVREL 285 (372)
T ss_dssp GGGCCEEECEEHHHHHHHHHHHHHCGGG----T---------------------------TTTEEEEECCTTCEEEHHHH
T ss_pred CCCceEEEEEEHHHHHHHHHHHHhcccC----c---------------------------CCCceEEeCCCCCCccHHHH
Confidence 8899999999999999999998876542 0 1278899999 6 8999999
Q ss_pred HHHHHHhhchh
Q psy13944 314 VNYIKQNIKEK 324 (1217)
Q Consensus 314 ~~~ia~~~g~~ 324 (1217)
++.+++.+|.+
T Consensus 286 ~~~i~~~~g~~ 296 (372)
T 3slg_A 286 ANKMLELAAEF 296 (372)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHhCCC
Confidence 99999999875
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=215.78 Aligned_cols=240 Identities=15% Similarity=0.080 Sum_probs=185.1
Q ss_pred CcccCCCCCCcccHHHHHHHH-hcChh--HHHhhh--------------cCcccCCCeEEEEccCCCCCCCCCHHHHHHh
Q psy13944 8 LGHNGAKTCKHNSILWVAKDF-FADDA--FDRLRK--------------ENANFTERIVVLTADLQSDGLGLDEKEKKVL 70 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~-l~~~v--fd~Lr~--------------~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L 70 (1217)
.-+||+.+.-|..+.++|.+. -...+ .++... .......++.++.+|++++ ++++.+
T Consensus 13 vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~ 86 (362)
T 3sxp_A 13 ILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNP------LDLRRL 86 (362)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCH------HHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCH------HHHHHh
Confidence 558999999999999999883 12222 221110 0011234679999999998 888888
Q ss_pred -cCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc-ccccccCCCCChHHHH
Q psy13944 71 -REDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK-IEEKFYEPLYTHIEME 147 (1217)
Q Consensus 71 -~~~VDiViH~AA~v~f-~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~-I~E~~y~~p~dp~~~~ 147 (1217)
..++|+|||+||.... .+.+...+++|+.||.+++++|++. +++ |||+||+++||.... ++|+...
T Consensus 87 ~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~vyg~~~~~~~E~~~~--------- 155 (362)
T 3sxp_A 87 EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAGVYGNTKAPNVVGKNE--------- 155 (362)
T ss_dssp TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGGGGCSCCSSBCTTSCC---------
T ss_pred hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHHHhCCCCCCCCCCCCC---------
Confidence 7899999999998764 3667889999999999999999985 666 999999999987542 3332211
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
...+.|+.||+++|++++.++..++++++||++||||...+...+ ......++..+.
T Consensus 156 --------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~---~~~~~~~~~~~~ 212 (362)
T 3sxp_A 156 --------------------SPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKT---ASMVLQLALGAM 212 (362)
T ss_dssp --------------------CCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGG---SCHHHHHHHHHH
T ss_pred --------------------CCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcc---hhHHHHHHHHHH
Confidence 113679999999999999998669999999999999976543211 122346667777
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|....+++++++.+++|||+|+|++++.++..... | .||++++
T Consensus 213 ~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~~----------------------------------g-~~~i~~~~ 257 (362)
T 3sxp_A 213 AFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKS----------------------------------G-VYNVGYSQ 257 (362)
T ss_dssp TTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSSC----------------------------------E-EEEESCSC
T ss_pred hCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCCC----------------------------------C-EEEeCCCC
Confidence 887777778889999999999999999987753222 5 8999988
Q ss_pred ccCchHHHHHHHHhhc
Q psy13944 307 NYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g 322 (1217)
+++..|+++.+++.+|
T Consensus 258 ~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 258 ARSYNEIVSILKEHLG 273 (362)
T ss_dssp EEEHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHcC
Confidence 8999999999999998
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=210.69 Aligned_cols=237 Identities=15% Similarity=0.102 Sum_probs=178.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc-
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF- 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f- 86 (1217)
-+||+.+.-|..+.++|.+.....+.++..... .....++.++.+|+++. ++..+++++|+|||+||....
T Consensus 5 lVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------~~~~~~~~~d~vih~a~~~~~~ 77 (313)
T 3ehe_A 5 VVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAAD-------DIKDYLKGAEEVWHIAANPDVR 77 (313)
T ss_dssp EEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTTS-------CCHHHHTTCSEEEECCCCCCCC
T ss_pred EEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCChH-------HHHHHhcCCCEEEECCCCCChh
Confidence 478999999999999987744222222111111 12346789999999874 345566799999999996532
Q ss_pred --ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccccccc
Q psy13944 87 --DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTVLN 162 (1217)
Q Consensus 87 --~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~t 162 (1217)
.+.+...+++|+.||.+++++|++. ++++|||+||+.+||.... ++|+...
T Consensus 78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~~~~~~E~~~~------------------------ 132 (313)
T 3ehe_A 78 IGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAKVIPTPEDYPT------------------------ 132 (313)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCSSSSBCTTSCC------------------------
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCCCCCCCCCCCC------------------------
Confidence 3567789999999999999999985 6889999999999986432 3332211
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcC-ceeEEeeCCC
Q psy13944 163 DILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLG-IMRTVYQNTS 239 (1217)
Q Consensus 163 p~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G-~l~~i~g~~~ 239 (1217)
...+.|+.||+.+|++++.++ .+++++++||+.|||+...+ + ....++..+..+ ....+.++++
T Consensus 133 -----~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~------~~~~~~~~~~~~~~~~~~~~~g~ 199 (313)
T 3ehe_A 133 -----HPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--G------VIYDFIMKLKRNPEELEILGNGE 199 (313)
T ss_dssp -----CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--S------HHHHHHHHHHHCTTEEEESTTSC
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--C------hHHHHHHHHHcCCCceEEeCCCC
Confidence 112679999999999999876 69999999999999997542 1 223455555555 4445778899
Q ss_pred ceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHH
Q psy13944 240 NIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIK 318 (1217)
Q Consensus 240 ~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia 318 (1217)
+.+++|||||+|++++.++.... .++.||++++ +++..|+++.++
T Consensus 200 ~~~~~i~v~Dva~a~~~~~~~~~----------------------------------~~~~~ni~~~~~~s~~e~~~~i~ 245 (313)
T 3ehe_A 200 QNKSYIYISDCVDAMLFGLRGDE----------------------------------RVNIFNIGSEDQIKVKRIAEIVC 245 (313)
T ss_dssp CEECCEEHHHHHHHHHHHTTCCS----------------------------------SEEEEECCCSCCEEHHHHHHHHH
T ss_pred eEEeEEEHHHHHHHHHHHhccCC----------------------------------CCceEEECCCCCeeHHHHHHHHH
Confidence 99999999999999998876211 2678999998 999999999999
Q ss_pred Hhhchh
Q psy13944 319 QNIKEK 324 (1217)
Q Consensus 319 ~~~g~~ 324 (1217)
+.+|.+
T Consensus 246 ~~~g~~ 251 (313)
T 3ehe_A 246 EELGLS 251 (313)
T ss_dssp HHTTCC
T ss_pred HHhCCC
Confidence 999875
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=218.34 Aligned_cols=251 Identities=16% Similarity=0.061 Sum_probs=180.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc--c-c--CCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA--N-F--TERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAA 82 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p--~-~--~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA 82 (1217)
.-+||+.+.-|..+.++|.+.....+.-..|.... . . ..+++++.+|++++ +++..+++++|+|||+||
T Consensus 35 ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~------~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 35 VMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDD------ALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCH------HHHHHCCSCCSEEEECCC
T ss_pred EEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCH------HHHHHHhhCCCEEEECCC
Confidence 55899999999999999988531222211121111 1 1 35799999999998 889999999999999999
Q ss_pred cCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--cc--ccccCCCCChHHHHHHhhcCCc
Q psy13944 83 TVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IE--EKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 83 ~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~--E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
..... +.....+++|+.|+.+++++|++.+++++|||+||+++||.... ++ |..+..|
T Consensus 109 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~--------------- 173 (377)
T 2q1s_A 109 YHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVS--------------- 173 (377)
T ss_dssp CSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCC---------------
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCccccccccc---------------
Confidence 87543 45678999999999999999988437899999999999986431 22 2211000
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcc-cccc-----cchhHHHHHHHh
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPM-WVKG-----MNGLTAMYVAVG 227 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pG-Widn-----~~g~~~li~~~~ 227 (1217)
.....+.|+.||+.+|++++.++ .+++++++||+.|||+...+.+| |... ......++..+.
T Consensus 174 ----------~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 243 (377)
T 2q1s_A 174 ----------LHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL 243 (377)
T ss_dssp ----------SSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH
T ss_pred ----------ccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH
Confidence 00112679999999999998876 58999999999999997633222 2211 122345666667
Q ss_pred cCceeEEeeCCCceeccccHHHHHHH-HHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNI-LLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnA-ii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg 306 (1217)
.|....++++++..+++|+|||+|++ ++.++..... | .||++++
T Consensus 244 ~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~~----------------------------------g-~~~i~~~ 288 (377)
T 2q1s_A 244 KGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPG----------------------------------G-VYNIASG 288 (377)
T ss_dssp TTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCTT----------------------------------E-EEECCCC
T ss_pred cCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCCC----------------------------------C-eEEecCC
Confidence 77655567888999999999999999 8877764222 5 8999998
Q ss_pred -ccCchHHHHHHHHhhchh
Q psy13944 307 -NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 -~~s~~el~~~ia~~~g~~ 324 (1217)
+++..|+++.+++.+|.+
T Consensus 289 ~~~s~~e~~~~i~~~~g~~ 307 (377)
T 2q1s_A 289 KETSIADLATKINEITGNN 307 (377)
T ss_dssp CCEEHHHHHHHHHHHHTCC
T ss_pred CceeHHHHHHHHHHHhCCC
Confidence 899999999999998875
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-20 Score=210.81 Aligned_cols=241 Identities=17% Similarity=0.118 Sum_probs=179.6
Q ss_pred CcccCCCCCCcccHHHHHHHHh-cChhHHHhhhc-------Cccc--CCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFF-ADDAFDRLRKE-------NANF--TERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l-~~~vfd~Lr~~-------~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+.. ...+.-.-|.. .... ..+++++.+|++++ +++..++.++|+|
T Consensus 6 vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~v 79 (336)
T 2hun_A 6 LLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADY------ELVKELVRKVDGV 79 (336)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCH------HHHHHHHHTCSEE
T ss_pred EEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCH------HHHHHHhhCCCEE
Confidence 4589999999999999998863 12222111110 0011 34789999999998 8888888899999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhc
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
||+||..... +....++++|+.|+.+++++|.+.+..++|||+||.++||... .++|+...
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~-------------- 145 (336)
T 2hun_A 80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRL-------------- 145 (336)
T ss_dssp EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCC--------------
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCC--------------
Confidence 9999986532 3456789999999999999999874347999999999998642 12332111
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCc
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGI 230 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~ 230 (1217)
...+.|+.||+++|++++.++ .+++++++||+.|||+...+. .....++..+..|.
T Consensus 146 ---------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-------~~~~~~~~~~~~~~ 203 (336)
T 2hun_A 146 ---------------MPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-------KLIPKTIIRASLGL 203 (336)
T ss_dssp ---------------CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-------SHHHHHHHHHHTTC
T ss_pred ---------------CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-------chHHHHHHHHHcCC
Confidence 112679999999999999876 689999999999999975431 11234555666676
Q ss_pred eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccC
Q psy13944 231 MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYD 309 (1217)
Q Consensus 231 l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s 309 (1217)
...++++++..+++++|+|+|++++.++..... ++.||++++ +++
T Consensus 204 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~----------------------------------g~~~~v~~~~~~s 249 (336)
T 2hun_A 204 KIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES----------------------------------REIYNISAGEEKT 249 (336)
T ss_dssp CEEEETC---CEEEEEHHHHHHHHHHHHHHCCT----------------------------------TCEEEECCSCEEC
T ss_pred CceEeCCCCceeeeEEHHHHHHHHHHHHhCCCC----------------------------------CCEEEeCCCCccc
Confidence 556678888999999999999999988754222 678999998 899
Q ss_pred chHHHHHHHHhhchh
Q psy13944 310 TTNHVNYIKQNIKEK 324 (1217)
Q Consensus 310 ~~el~~~ia~~~g~~ 324 (1217)
..|+++.+++.+|.+
T Consensus 250 ~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 250 NLEVVKIILRLMGKG 264 (336)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998865
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=215.79 Aligned_cols=244 Identities=14% Similarity=0.076 Sum_probs=185.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFD 87 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~ 87 (1217)
.-+||+.+.-|..+.++|.+.... +.-..|.. . ..++.++.+|++++ +++..+++++|+|||+||.....
T Consensus 22 vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~--~-~~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~ 91 (347)
T 4id9_A 22 ILVTGSAGRVGRAVVAALRTQGRT-VRGFDLRP--S-GTGGEEVVGSLEDG------QALSDAIMGVSAVLHLGAFMSWA 91 (347)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCC-EEEEESSC--C-SSCCSEEESCTTCH------HHHHHHHTTCSEEEECCCCCCSS
T ss_pred EEEECCCChHHHHHHHHHHhCCCE-EEEEeCCC--C-CCCccEEecCcCCH------HHHHHHHhCCCEEEECCcccCcc
Confidence 558999999999999999875322 22211211 1 16789999999998 88999999999999999987654
Q ss_pred c-CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc----cccccccCCCCChHHHHHHhhcCCcccccccc
Q psy13944 88 E-HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK----KIEEKFYEPLYTHIEMEQIINSCSHTELTVLN 162 (1217)
Q Consensus 88 e-~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~----~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~t 162 (1217)
. .....+++|+.||.+++++|++ .++++|||+||+++||... .+.|....
T Consensus 92 ~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~------------------------ 146 (347)
T 4id9_A 92 PADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASSGEVYPENRPEFLPVTEDHPL------------------------ 146 (347)
T ss_dssp GGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEEGGGTTTTSCSSSSBCTTSCC------------------------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECCHHHhCCCCCCCCCcCCCCCC------------------------
Confidence 3 3478999999999999999998 4789999999999998731 13332211
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceec-------------cCCCCCCccccc----ccchhHHHH
Q psy13944 163 DILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVM-------------PVVEEPCPMWVK----GMNGLTAMY 223 (1217)
Q Consensus 163 p~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~-------------G~~~eP~pGWid----n~~g~~~li 223 (1217)
...+.|+.||+++|++++.+. .+++++|+||+.|| |+...+...+.. .......++
T Consensus 147 -----~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
T 4id9_A 147 -----CPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELL 221 (347)
T ss_dssp -----CCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHH
T ss_pred -----CCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHH
Confidence 113679999999999999876 78999999999999 554322100000 011223455
Q ss_pred HHHhcCceeEEeeCCCceecc----ccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccc
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDM----VPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDV 299 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~----VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~ 299 (1217)
..+..|....++++++..+|+ +||+|+|++++.++..... .++
T Consensus 222 ~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~---------------------------------~~~ 268 (347)
T 4id9_A 222 QSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEA---------------------------------AGG 268 (347)
T ss_dssp HHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGG---------------------------------TTE
T ss_pred HHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCccc---------------------------------CCC
Confidence 566677666778889999999 9999999999999876543 267
Q ss_pred eeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 300 NYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 300 ~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
.||++++ +++..|+++.+++.+|.+
T Consensus 269 ~~ni~~~~~~s~~e~~~~i~~~~g~~ 294 (347)
T 4id9_A 269 TFNLGADEPADFAALLPKIAALTGLP 294 (347)
T ss_dssp EEEESCSSCEEHHHHHHHHHHHHCCC
T ss_pred eEEECCCCcccHHHHHHHHHHHhCCC
Confidence 8999998 899999999999999875
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=213.32 Aligned_cols=246 Identities=14% Similarity=0.050 Sum_probs=183.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH-----------HhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD-----------RLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLREDV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd-----------~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V 74 (1217)
.-+||+.+.-|..+.++|.+.... .+.+ .+.+.... ...++.++.+|++++ +++..+++++
T Consensus 30 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~ 103 (352)
T 1sb8_A 30 WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL------DDCNNACAGV 103 (352)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH------HHHHHHHTTC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH------HHHHHHhcCC
Confidence 458999999999999999874221 1111 11111000 025799999999998 8888899999
Q ss_pred cEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHH
Q psy13944 75 NIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 75 DiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~ 149 (1217)
|+|||+||..... +.+...+++|+.||.+++++|++. ++++|||+||.++|+... .++|...+
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~E~~~~----------- 171 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPKVEDTIG----------- 171 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCC-----------
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCCCCCCCCCCC-----------
Confidence 9999999986532 456678999999999999999984 789999999999998643 13332211
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
...+.|+.||+.+|++++.++ .+++++++||+.|||+...+...+. .....++..+.
T Consensus 172 ------------------~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~ 230 (352)
T 1sb8_A 172 ------------------KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMI 230 (352)
T ss_dssp ------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTC---CHHHHHHHHHH
T ss_pred ------------------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchh---hHHHHHHHHHH
Confidence 112679999999999998875 5899999999999999764421110 11234555666
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|....++++++..+++++|+|+|++++.++..... ..++.||++++
T Consensus 231 ~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~--------------------------------~~~~~~ni~~~~ 278 (352)
T 1sb8_A 231 QGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD--------------------------------ARNQVYNIAVGG 278 (352)
T ss_dssp HTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG--------------------------------GCSEEEEESCSC
T ss_pred CCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc--------------------------------CCCceEEeCCCC
Confidence 776666788899999999999999999887764211 02678999988
Q ss_pred ccCchHHHHHHHHhh---chh
Q psy13944 307 NYDTTNHVNYIKQNI---KEK 324 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~---g~~ 324 (1217)
+++..|+++.+++.+ |.+
T Consensus 279 ~~s~~e~~~~i~~~~~~~g~~ 299 (352)
T 1sb8_A 279 RTSLNQLFFALRDGLAENGVS 299 (352)
T ss_dssp CEEHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHHHhcCCC
Confidence 899999999999988 654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-20 Score=207.15 Aligned_cols=250 Identities=19% Similarity=0.158 Sum_probs=179.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAAT 83 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~ 83 (1217)
.-+||+.+.-|..+.++|.+.... .+.++..... .....+++++.+|++++ +++..+++ ++|+|||+||.
T Consensus 4 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~a~~ 77 (330)
T 2c20_A 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDK------AFLRDVFTQENIEAVMHFAAD 77 (330)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCH------HHHHHHHHHSCEEEEEECCCC
T ss_pred EEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCH------HHHHHHHhhcCCCEEEECCcc
Confidence 347899999999999999874221 1122111111 11223789999999997 88888887 89999999998
Q ss_pred CCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 84 VKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 84 v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
.... +.....+++|+.|+.+++++|++. ++++|||+||+++|+... .++|....
T Consensus 78 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~~~~~~E~~~~-------------------- 136 (330)
T 2c20_A 78 SLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVDVDLITEETMT-------------------- 136 (330)
T ss_dssp CCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCSSSSBCTTSCC--------------------
T ss_pred cCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCCCCCCCcCCCC--------------------
Confidence 7543 356678999999999999999984 789999999999998643 13332211
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccc-cchhHHHHHHHhc--CceeE
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKG-MNGLTAMYVAVGL--GIMRT 233 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn-~~g~~~li~~~~~--G~l~~ 233 (1217)
...+.|+.||+.+|++++.+. .+++++++||+.|||+......|..+. .......+..... +....
T Consensus 137 ---------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (330)
T 2c20_A 137 ---------NPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIM 207 (330)
T ss_dssp ---------CCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEE
T ss_pred ---------CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeE
Confidence 112679999999999999876 589999999999999975433332211 1112222333233 22334
Q ss_pred Eee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 234 VYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 234 i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
+++ +++..+++|||||+|++++.++..... . ..++.||++++
T Consensus 208 ~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~----~---------------------------~~~~~~ni~~~~ 256 (330)
T 2c20_A 208 MFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQN----G---------------------------GESDFYNLGNGN 256 (330)
T ss_dssp EECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHT----T---------------------------CCCEEEECCCTT
T ss_pred EeCCccccCCCceeEeeEeHHHHHHHHHHHHhcccc----C---------------------------CCCCeEEeCCCC
Confidence 555 678899999999999999988875433 0 02578999988
Q ss_pred ccCchHHHHHHHHhhchh
Q psy13944 307 NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~ 324 (1217)
+++..|+++.+++.+|.+
T Consensus 257 ~~s~~e~~~~i~~~~g~~ 274 (330)
T 2c20_A 257 GFSVKEIVDAVREVTNHE 274 (330)
T ss_dssp CBCHHHHHHHHHHHTTSC
T ss_pred CccHHHHHHHHHHHhCCC
Confidence 899999999999998865
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=225.90 Aligned_cols=230 Identities=23% Similarity=0.271 Sum_probs=162.4
Q ss_pred CcccCCCCCCcccHHHHHHHHh--cChhH------------HHhhhcC------------cccCCCeEEEEccCCCCCCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFF--ADDAF------------DRLRKEN------------ANFTERIVVLTADLQSDGLG 61 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l--~~~vf------------d~Lr~~~------------p~~~~kI~~V~GDl~d~~LG 61 (1217)
.-+||+.+.-|..+.++|.+.. ...+. .++.+.. +....+++++.||++++.+|
T Consensus 76 VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~g 155 (478)
T 4dqv_A 76 VLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLG 155 (478)
T ss_dssp EEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGG
T ss_pred EEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccC
Confidence 3478888888888888887752 11111 1111111 11246899999999999999
Q ss_pred CCHHHHHHhcCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCC
Q psy13944 62 LDEKEKKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEP 139 (1217)
Q Consensus 62 Ls~edl~~L~~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~ 139 (1217)
++.++++.+++++|+|||+||.+++ .++...+++|+.||.+++++|++ .++++|||+||+++|+.... +.|+..
T Consensus 156 ld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~-~~~~~~V~iSS~~v~~~~~~~~~~E~~~-- 231 (478)
T 4dqv_A 156 LDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALT-TKLKPFTYVSTADVGAAIEPSAFTEDAD-- 231 (478)
T ss_dssp CCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTS-SSCCCEEEEEEGGGGTTSCTTTCCSSSC--
T ss_pred CCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeehhhcCccCCCCcCCccc--
Confidence 9999999999999999999999887 66667889999999999999998 47899999999999886431 233211
Q ss_pred CCChHHHHHHhhcCCccccccccc--ccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLND--ILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp--~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....++ .....++|.|+.||+++|+++++++ .+++++|+||++|||+....- .|..
T Consensus 232 ------------------~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g-~~~~- 291 (478)
T 4dqv_A 232 ------------------IRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAG-QLNM- 291 (478)
T ss_dssp ------------------HHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSS-CCCT-
T ss_pred ------------------ccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCC-cCCH-
Confidence 111111 2234566889999999999999886 589999999999999854110 0111
Q ss_pred cchhHHHHHH-HhcCceeE-EeeC------CCceeccccHHHHHHHHHHHHHhh
Q psy13944 216 MNGLTAMYVA-VGLGIMRT-VYQN------TSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 216 ~~g~~~li~~-~~~G~l~~-i~g~------~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
......++.. ...|..+. +++. ++...|+|||||+|++++.++...
T Consensus 292 ~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~ 345 (478)
T 4dqv_A 292 SDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARV 345 (478)
T ss_dssp TBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhc
Confidence 1112233333 33454432 2222 267899999999999999988763
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-20 Score=209.56 Aligned_cols=239 Identities=16% Similarity=0.109 Sum_probs=180.8
Q ss_pred cccCCCCCCcccHHHHHHHH-h-c---ChhHHHhhhc---C----ccc--CCCeEEEEccCCCCCCCCCHHHHHHhcCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDF-F-A---DDAFDRLRKE---N----ANF--TERIVVLTADLQSDGLGLDEKEKKVLREDV 74 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~-l-~---~~vfd~Lr~~---~----p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~~V 74 (1217)
-+||+.+.-|..+.++|.+. . . ..+.-.-|.. . ... ..+++++.+|++++ +++..++.++
T Consensus 4 lVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~ 77 (337)
T 1r6d_A 4 LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDA------GLLARELRGV 77 (337)
T ss_dssp EEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCH------HHHHHHTTTC
T ss_pred EEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCH------HHHHHHhcCC
Confidence 46899999999999999874 1 1 2222111100 0 011 25789999999998 8898999999
Q ss_pred cEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHH
Q psy13944 75 NIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 75 DiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~ 149 (1217)
|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||.++||... .++|....
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~----------- 145 (337)
T 1r6d_A 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSGSWTESSPL----------- 145 (337)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSSCBCTTSCC-----------
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCCCCCCCCCCCC-----------
Confidence 9999999986532 344578999999999999999985 788999999999998642 12332111
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
...+.|+.||+.+|++++.+. .+++++++||+.|||+...+. .....++..+.
T Consensus 146 ------------------~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-------~~~~~~~~~~~ 200 (337)
T 1r6d_A 146 ------------------EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-------KLIPLFVTNLL 200 (337)
T ss_dssp ------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-------SHHHHHHHHHH
T ss_pred ------------------CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-------ChHHHHHHHHh
Confidence 112679999999999998876 589999999999999975431 11234555666
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|....++++++..+++++|+|+|++++.++..... ++.||++++
T Consensus 201 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~----------------------------------g~~~~v~~~~ 246 (337)
T 1r6d_A 201 DGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA----------------------------------GEIYHIGGGL 246 (337)
T ss_dssp TTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT----------------------------------TCEEEECCCC
T ss_pred cCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCC----------------------------------CCEEEeCCCC
Confidence 676556678889999999999999999988754222 678999998
Q ss_pred ccCchHHHHHHHHhhchh
Q psy13944 307 NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~ 324 (1217)
+++..|+++.+++.+|.+
T Consensus 247 ~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 247 ELTNRELTGILLDSLGAD 264 (337)
T ss_dssp EEEHHHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHHhCCC
Confidence 899999999999998875
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-20 Score=208.98 Aligned_cols=239 Identities=12% Similarity=0.062 Sum_probs=179.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiViH~AA~v~ 85 (1217)
.-+||+.+.-|..+.++|.+... .+.-.-|....... ++.++.+|++++ +++..++++ +|+|||+||...
T Consensus 15 vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~l-~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~ 86 (321)
T 2pk3_A 15 ALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEAKLP-NVEMISLDIMDS------QRVKKVISDIKPDYIFHLAAKSS 86 (321)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTCCCT-TEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCC
T ss_pred EEEECCCChHHHHHHHHHHHCCC-EEEEEecCCccccc-eeeEEECCCCCH------HHHHHHHHhcCCCEEEEcCcccc
Confidence 55899999999999999987422 22211111111111 789999999987 888888775 899999999875
Q ss_pred c---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccc--c--cccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 86 F---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNI--K--KIEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 86 f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~--~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
. .+.+...+++|+.||.+++++|++++++++|||+||.++|+.. . .++|+...
T Consensus 87 ~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~-------------------- 146 (321)
T 2pk3_A 87 VKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQL-------------------- 146 (321)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC--------------------
T ss_pred hhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCC--------------------
Confidence 3 2357789999999999999999876568999999999999863 1 13332211
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhc---C--ce
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL---G--IM 231 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~---G--~l 231 (1217)
...+.|+.||+++|++++.++ .+++++++||+.|||+...+. + ....++..+.. | ..
T Consensus 147 ---------~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~------~~~~~~~~~~~~~~g~~~~ 210 (321)
T 2pk3_A 147 ---------RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-F------VTQDFAKQIVDIEMEKQEP 210 (321)
T ss_dssp ---------BCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-S------HHHHHHHHHHHHHTTSSCS
T ss_pred ---------CCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-c------hHHHHHHHHHHHhcCCCCC
Confidence 112679999999999998876 589999999999999976431 1 11234444444 6 34
Q ss_pred eEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCc
Q psy13944 232 RTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDT 310 (1217)
Q Consensus 232 ~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~ 310 (1217)
....++++..+++++|+|+|++++.++..... ++.||++++ +++.
T Consensus 211 ~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~----------------------------------g~~~~i~~~~~~s~ 256 (321)
T 2pk3_A 211 IIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKT----------------------------------GDVYNVCSGIGTRI 256 (321)
T ss_dssp EEEESCSSCEEEEEEHHHHHHHHHHHHHHCCT----------------------------------TCEEEESCSCEEEH
T ss_pred eEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCC----------------------------------CCeEEeCCCCCeeH
Confidence 45677888999999999999999988765322 678999998 8999
Q ss_pred hHHHHHHHHhhchh
Q psy13944 311 TNHVNYIKQNIKEK 324 (1217)
Q Consensus 311 ~el~~~ia~~~g~~ 324 (1217)
.|+++.+++.+|.+
T Consensus 257 ~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 257 QDVLDLLLAMANVK 270 (321)
T ss_dssp HHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998865
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=206.94 Aligned_cols=240 Identities=13% Similarity=0.031 Sum_probs=176.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
-+||+.+.-|..+.++|.+.-.. .+.++...... ....+++++.+|++++ + +..++++ |+|||+||....
T Consensus 4 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~------~-~~~~~~~-d~vih~A~~~~~ 75 (312)
T 3ko8_A 4 VVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDY------S-WGAGIKG-DVVFHFAANPEV 75 (312)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTST------T-TTTTCCC-SEEEECCSSCSS
T ss_pred EEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccH------H-HHhhcCC-CEEEECCCCCCc
Confidence 47899999999999999874322 12222111111 1246789999999998 4 5566677 999999996432
Q ss_pred ---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 87 ---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 87 ---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
.+.....+++|+.||.+++++|++. ++++|||+||+++||.... ++|+...
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~----------------------- 131 (312)
T 3ko8_A 76 RLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADVIPTPEEEPY----------------------- 131 (312)
T ss_dssp SGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTTSCC-----------------------
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCCCCCCCCCCC-----------------------
Confidence 3456788999999999999999985 7899999999999987542 3332211
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcC-ceeEEeeCC
Q psy13944 162 NDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLG-IMRTVYQNT 238 (1217)
Q Consensus 162 tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G-~l~~i~g~~ 238 (1217)
...+.|+.||+.+|++++.++ .+++++++||+.|||+...+ .....++..+..+ ....+.+++
T Consensus 132 ------~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g 197 (312)
T 3ko8_A 132 ------KPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--------GVIYDFIMKLRRNPNVLEVLGDG 197 (312)
T ss_dssp ------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--------SHHHHHHHHHHHCTTEEEEC---
T ss_pred ------CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--------ChHHHHHHHHHhCCCCeEEcCCC
Confidence 112679999999999999876 58999999999999997532 1223455555555 344567888
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYI 317 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~i 317 (1217)
++.+++|||+|+|++++.++.+... . ...++.||++++ +++..|+++.+
T Consensus 198 ~~~~~~i~v~Dva~a~~~~~~~~~~----~--------------------------~~~~~~~ni~~~~~~s~~e~~~~i 247 (312)
T 3ko8_A 198 TQRKSYLYVRDAVEATLAAWKKFEE----M--------------------------DAPFLALNVGNVDAVRVLDIAQIV 247 (312)
T ss_dssp -CEECEEEHHHHHHHHHHHHHHHHH----S--------------------------CCSEEEEEESCSSCEEHHHHHHHH
T ss_pred CeEEeeEEHHHHHHHHHHHHHhccc----c--------------------------CCCCcEEEEcCCCceeHHHHHHHH
Confidence 9999999999999999998876332 0 012678999998 89999999999
Q ss_pred HHhhchh
Q psy13944 318 KQNIKEK 324 (1217)
Q Consensus 318 a~~~g~~ 324 (1217)
++.+|.+
T Consensus 248 ~~~~g~~ 254 (312)
T 3ko8_A 248 AEVLGLR 254 (312)
T ss_dssp HHHHTCC
T ss_pred HHHhCCC
Confidence 9999875
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.82 E-value=9.7e-20 Score=207.26 Aligned_cols=256 Identities=9% Similarity=0.015 Sum_probs=183.8
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhc--Ccc--cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKE--NAN--FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~--~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
-+||+.+.-|..+.++|.+.-...+.-..|.. ... ...+++++.||++++. +.++.+++++|+|||+||..
T Consensus 4 lVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~~~~~~~d~vih~A~~~ 78 (345)
T 2bll_A 4 LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIA 78 (345)
T ss_dssp EEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCC
T ss_pred EEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcH-----HHHHhhccCCCEEEEccccc
Confidence 47899999999999999875222222111111 111 1357899999999851 55777778999999999976
Q ss_pred Cc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 85 KF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 85 ~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
.. .......+++|+.|+.+++++|++. + ++|||+||+++||.... ++|+....+..
T Consensus 79 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~----------------- 139 (345)
T 2bll_A 79 TPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVG----------------- 139 (345)
T ss_dssp CHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCC-----------------
T ss_pred CccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCCCCcCCcccccccC-----------------
Confidence 53 3456678999999999999999985 5 89999999999986432 34432211000
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccc-cchhHHHHHHHhcCceeEEee
Q psy13944 160 VLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKG-MNGLTAMYVAVGLGIMRTVYQ 236 (1217)
Q Consensus 160 ~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn-~~g~~~li~~~~~G~l~~i~g 236 (1217)
| .....+.|+.||+.+|++++.+. .+++++++||+.|||+...+...+..+ ......++..+..|....+++
T Consensus 140 ---~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (345)
T 2bll_A 140 ---P--VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLID 214 (345)
T ss_dssp ---C--TTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGG
T ss_pred ---c--ccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEEC
Confidence 0 00112579999999999998875 589999999999999976543211111 112345666667777666778
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC--ccCchHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG--NYDTTNHV 314 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg--~~s~~el~ 314 (1217)
++++.+++|||+|+|++++.++..... . ..++.||++++ +++..|++
T Consensus 215 ~g~~~~~~i~v~Dva~a~~~~~~~~~~----~---------------------------~~g~~~~i~~~~~~~s~~e~~ 263 (345)
T 2bll_A 215 GGKQKRCFTDIRDGIEALYRIIENAGN----R---------------------------CDGEIINIGNPENEASIEELG 263 (345)
T ss_dssp GSCCEEECEEHHHHHHHHHHHHHCGGG----T---------------------------TTTEEEEECCTTSEEEHHHHH
T ss_pred CCCEEEEEEEHHHHHHHHHHHHhhccc----c---------------------------CCCceEEeCCCCCCCCHHHHH
Confidence 889999999999999999988875432 0 12678999987 58999999
Q ss_pred HHHHHhhchh
Q psy13944 315 NYIKQNIKEK 324 (1217)
Q Consensus 315 ~~ia~~~g~~ 324 (1217)
+.+++.+|.+
T Consensus 264 ~~i~~~~g~~ 273 (345)
T 2bll_A 264 EMLLASFEKH 273 (345)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhCCC
Confidence 9999998865
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.9e-20 Score=209.24 Aligned_cols=252 Identities=13% Similarity=0.074 Sum_probs=180.8
Q ss_pred CcccCCCCCCcccHHHHHHHHh-cChhHHHhhhc-------Ccc-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFF-ADDAFDRLRKE-------NAN-FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l-~~~vfd~Lr~~-------~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiVi 78 (1217)
.-+||+.+.-|..+.++|.+.. ...+.-.-|.. ... ...++.++.+|++++ +++..+++++|+||
T Consensus 7 vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vi 80 (348)
T 1oc2_A 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADA------ELVDKLAAKADAIV 80 (348)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCH------HHHHHHHTTCSEEE
T ss_pred EEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCH------HHHHHHhhcCCEEE
Confidence 4579999999999999998852 22222111110 011 125789999999998 88999999999999
Q ss_pred EcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccc-cccCCCCChHHHHHHhhcCC
Q psy13944 79 HVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEE-KFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 79 H~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E-~~y~~p~dp~~~~~~~~~l~ 154 (1217)
|+||..... +.....+++|+.||.+++++|.+. ++ +|||+||.++||....-+. .....+ + ...++
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~~~~~~~~~~~~~-~-------~~~~~ 150 (348)
T 1oc2_A 81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDLPLREDLPGHGEG-P-------GEKFT 150 (348)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCBCCGGGSTTTTCS-T-------TSSBC
T ss_pred ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCCcccccccccccc-c-------CCCcC
Confidence 999987532 344578999999999999999986 55 9999999999986421000 000000 0 00011
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCcee
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMR 232 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~ 232 (1217)
++. + ....+.|+.||+.+|++++.++ .+++++++||+.|||+...+. .....++..+..|...
T Consensus 151 E~~-----~---~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~ 215 (348)
T 1oc2_A 151 AET-----N---YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-------KFIPRQITNILAGIKP 215 (348)
T ss_dssp TTS-----C---CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-------SHHHHHHHHHHHTCCC
T ss_pred CCC-----C---CCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-------chHHHHHHHHHcCCCc
Confidence 110 0 1123689999999999998876 589999999999999975331 1123455556667666
Q ss_pred EEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCch
Q psy13944 233 TVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTT 311 (1217)
Q Consensus 233 ~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~ 311 (1217)
.++++++..+++++|+|+|++++.++..... ++.||++++ +++..
T Consensus 216 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~----------------------------------g~~~~i~~~~~~s~~ 261 (348)
T 1oc2_A 216 KLYGEGKNVRDWIHTNDHSTGVWAILTKGRM----------------------------------GETYLIGADGEKNNK 261 (348)
T ss_dssp EEETTSCCEEECEEHHHHHHHHHHHHHHCCT----------------------------------TCEEEECCSCEEEHH
T ss_pred eEecCCCceEeeEEHHHHHHHHHHHhhCCCC----------------------------------CCeEEeCCCCCCCHH
Confidence 6778889999999999999999988754222 678999998 89999
Q ss_pred HHHHHHHHhhchh
Q psy13944 312 NHVNYIKQNIKEK 324 (1217)
Q Consensus 312 el~~~ia~~~g~~ 324 (1217)
|+++.+++.+|.+
T Consensus 262 e~~~~i~~~~g~~ 274 (348)
T 1oc2_A 262 EVLELILEKMGQP 274 (348)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999998865
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=210.96 Aligned_cols=262 Identities=13% Similarity=0.018 Sum_probs=182.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHH------------------------hhhcCcccCCCeEEEEccCCCCCCCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDR------------------------LRKENANFTERIVVLTADLQSDGLGL 62 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~------------------------Lr~~~p~~~~kI~~V~GDl~d~~LGL 62 (1217)
.-+||+.+.-|..+.++|.+.... .+.++ +.+.......++.++.||++++
T Consensus 14 vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~---- 89 (404)
T 1i24_A 14 VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF---- 89 (404)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH----
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH----
Confidence 458999999999999999874222 11111 1100001135789999999987
Q ss_pred CHHHHHHhcCC--ccEEEEcCccCCcc---cCH---HHHHHHHHHHHHHHHHHhHhcCCC-CeEEEEcCcccccccc-cc
Q psy13944 63 DEKEKKVLRED--VNIVFHVAATVKFD---EHF---QTAFEINCKGTEKLLKMAEEMKNL-DSFIYVSTAYSNCNIK-KI 132 (1217)
Q Consensus 63 s~edl~~L~~~--VDiViH~AA~v~f~---e~l---~~a~~vNV~GT~~LLelAk~~~~l-k~fV~vSTa~v~g~~~-~I 132 (1217)
+++..++++ +|+|||+||..... ... ...+++|+.||.+++++|++. +. ++|||+||+++||... .+
T Consensus 90 --~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~~V~~SS~~vyg~~~~~~ 166 (404)
T 1i24_A 90 --EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMGEYGTPNIDI 166 (404)
T ss_dssp --HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGGCCCSSCB
T ss_pred --HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcEEEEeCcHHHhCCCCCCC
Confidence 788888877 99999999986532 222 247899999999999999986 44 6999999999998643 23
Q ss_pred cccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCC--
Q psy13944 133 EEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEP-- 208 (1217)
Q Consensus 133 ~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP-- 208 (1217)
+|..++.. +...+...+ ......+.|+.||+++|++++.++ .+++++++||+.|||+...+
T Consensus 167 ~E~~~~~~--------------~~~~~~~~~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~ 231 (404)
T 1i24_A 167 EEGYITIT--------------HNGRTDTLP-YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETE 231 (404)
T ss_dssp CSSEEEEE--------------ETTEEEEEE-CCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGG
T ss_pred Cccccccc--------------ccccccccc-CCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccc
Confidence 33221100 000000000 011223689999999999998875 58999999999999997643
Q ss_pred -Cccccccc-------chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy13944 209 -CPMWVKGM-------NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEA 280 (1217)
Q Consensus 209 -~pGWidn~-------~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~ 280 (1217)
.++|.+.. .....++..+..|....+++++++.+|+|||||+|++++.++.....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~----------------- 294 (404)
T 1i24_A 232 MHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK----------------- 294 (404)
T ss_dssp GSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC-----------------
T ss_pred cccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCccc-----------------
Confidence 12222211 12345666777777666788889999999999999999988865332
Q ss_pred cccCCCCchhhhhhhhcc--ceeeccCCccCchHHHHHHHHh---hchh
Q psy13944 281 KLIDPNNNVEEESIKKLD--VNYEINHGNYDTTNHVNYIKQN---IKEK 324 (1217)
Q Consensus 281 hl~np~~~~~~~~~~~~g--~~YnI~sg~~s~~el~~~ia~~---~g~~ 324 (1217)
.+ +.||+++++++..|+++.+++. +|.+
T Consensus 295 ----------------~g~~~~yni~~~~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 295 ----------------AGEFRVFNQFTEQFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp ----------------TTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCC
T ss_pred ----------------CCCceEEEECCCCCcHHHHHHHHHHHHHhhCCC
Confidence 13 6899988788999999999987 5544
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.8e-20 Score=209.40 Aligned_cols=249 Identities=19% Similarity=0.145 Sum_probs=180.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhc---C----ccc--CCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKE---N----ANF--TERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIV 77 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~---~----p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiV 77 (1217)
-+||+.+.-|..+.++|.+.-...+.-.-|.. . ... ..++.++.+|++++ +++..+++ ++|+|
T Consensus 4 lVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v 77 (361)
T 1kew_A 4 LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS------AEITRIFEQYQPDAV 77 (361)
T ss_dssp EEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCH------HHHHHHHHHHCCSEE
T ss_pred EEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCH------HHHHHHHhhcCCCEE
Confidence 47899999999999999884222232111110 0 011 24789999999998 88888887 89999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhc-CCCC-------eEEEEcCccccccccc---ccccccCCCCCh
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEM-KNLD-------SFIYVSTAYSNCNIKK---IEEKFYEPLYTH 143 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~-~~lk-------~fV~vSTa~v~g~~~~---I~E~~y~~p~dp 143 (1217)
||+||..... +.+..++++|+.||.+++++|.+. .+++ +|||+||.++||.... ..+.....+
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~--- 154 (361)
T 1kew_A 78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL--- 154 (361)
T ss_dssp EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC---
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCC---
Confidence 9999987532 345678999999999999999873 2566 9999999999986431 000000000
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
++++. .....+.|+.||+.+|++++.++ .+++++++||+.|||+...+. .....
T Consensus 155 ---------~~E~~--------~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-------~~~~~ 210 (361)
T 1kew_A 155 ---------FTETT--------AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-------KLIPL 210 (361)
T ss_dssp ---------BCTTS--------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------SHHHH
T ss_pred ---------CCCCC--------CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-------cHHHH
Confidence 11110 01123689999999999998876 589999999999999975431 11234
Q ss_pred HHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcccee
Q psy13944 222 MYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNY 301 (1217)
Q Consensus 222 li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Y 301 (1217)
++..+..|....++++++..+++++|+|+|++++.++..... |+.|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~----------------------------------g~~~ 256 (361)
T 1kew_A 211 VILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA----------------------------------GETY 256 (361)
T ss_dssp HHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT----------------------------------TCEE
T ss_pred HHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCCC----------------------------------CCEE
Confidence 555566676556678888999999999999999988754222 6789
Q ss_pred eccCC-ccCchHHHHHHHHhhchh
Q psy13944 302 EINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 302 nI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
|++++ +++..|+++.+++.+|.+
T Consensus 257 ~v~~~~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 257 NIGGHNEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp EECCCCEEEHHHHHHHHHHHHHHH
T ss_pred EecCCCeeeHHHHHHHHHHHhCCc
Confidence 99998 799999999999999876
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=208.98 Aligned_cols=251 Identities=14% Similarity=0.006 Sum_probs=183.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc---ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA---NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|.... ....+++++.+|++++ +++..+++++|+|||+||..
T Consensus 32 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~ 104 (379)
T 2c5a_A 32 ISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTEDMFCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADM 104 (379)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCSSSCGGGTCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCC
T ss_pred EEEECCccHHHHHHHHHHHHCC-CeEEEEECCCccchhhccCCceEEECCCCCH------HHHHHHhCCCCEEEECceec
Confidence 4589999999999999998742 222211121111 1124789999999998 88888899999999999986
Q ss_pred Cc----ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 85 KF----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 85 ~f----~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
.. .+.....+++|+.|+.+++++|++. ++++|||+||+++|+........ ..+ ++++....
T Consensus 105 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~~~~--~~~------------~~E~~~~~ 169 (379)
T 2c5a_A 105 GGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETT--NVS------------LKESDAWP 169 (379)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSS--SCE------------ECGGGGSS
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCCCcc--CCC------------cCcccCCC
Confidence 53 4567789999999999999999984 78999999999998864310000 000 01110000
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCce-eEEeeC
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIM-RTVYQN 237 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l-~~i~g~ 237 (1217)
....+.|+.||+.+|++++.++ .+++++++||+.|||+...+..++. .....++..+..|.. ..++++
T Consensus 170 ------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~ 240 (379)
T 2c5a_A 170 ------AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGRE---KAPAAFCRKAQTSTDRFEMWGD 240 (379)
T ss_dssp ------BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCC---CHHHHHHHHHHHCSSCEEEESC
T ss_pred ------CCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccc---cHHHHHHHHHHhCCCceEEeCC
Confidence 0113689999999999998875 5899999999999999765432221 123455666656654 456788
Q ss_pred CCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHH
Q psy13944 238 TSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNY 316 (1217)
Q Consensus 238 ~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ 316 (1217)
+++.++++||+|+|++++.++... . ++.||++++ +++..|+++.
T Consensus 241 g~~~~~~i~v~Dva~ai~~~l~~~-~----------------------------------~~~~ni~~~~~~s~~e~~~~ 285 (379)
T 2c5a_A 241 GLQTRSFTFIDECVEGVLRLTKSD-F----------------------------------REPVNIGSDEMVSMNEMAEM 285 (379)
T ss_dssp SCCEECCEEHHHHHHHHHHHHHSS-C----------------------------------CSCEEECCCCCEEHHHHHHH
T ss_pred CCeeEEEEEHHHHHHHHHHHhhcc-C----------------------------------CCeEEeCCCCccCHHHHHHH
Confidence 889999999999999999887642 2 457999988 8999999999
Q ss_pred HHHhhchh
Q psy13944 317 IKQNIKEK 324 (1217)
Q Consensus 317 ia~~~g~~ 324 (1217)
+++.+|.+
T Consensus 286 i~~~~g~~ 293 (379)
T 2c5a_A 286 VLSFEEKK 293 (379)
T ss_dssp HHHTTTCC
T ss_pred HHHHhCCC
Confidence 99998865
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=205.27 Aligned_cols=251 Identities=14% Similarity=0.075 Sum_probs=177.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhc------Cc--------ccCCCeEEEEccCCCCCCCCCHHHHHHhcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKE------NA--------NFTERIVVLTADLQSDGLGLDEKEKKVLRE 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~------~p--------~~~~kI~~V~GDl~d~~LGLs~edl~~L~~ 72 (1217)
.-+||+.+.-|..+.++|.+.... .+.++.... .+ ....+++++.+|++++ +++..+++
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~------~~~~~~~~ 78 (348)
T 1ek6_A 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ------GALQRLFK 78 (348)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH------HHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH------HHHHHHHH
Confidence 447899999999999999874322 112111000 00 0124789999999997 78888877
Q ss_pred --CccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHH
Q psy13944 73 --DVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIE 145 (1217)
Q Consensus 73 --~VDiViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~ 145 (1217)
++|+|||+||.... .+.....+++|+.|+.+++++|++. ++++|||+||+++|+... .++|+...
T Consensus 79 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~E~~~~------- 150 (348)
T 1ek6_A 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYLPLDEAHPT------- 150 (348)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSSSBCTTSCC-------
T ss_pred hcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCCCCCcCCCCCC-------
Confidence 89999999998653 2456678999999999999999984 789999999999998632 13332111
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccc--cchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~ 220 (1217)
.+..+.|+.||+.+|++++.++ .+++++++||++|||+......|.... .....
T Consensus 151 ---------------------~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~ 209 (348)
T 1ek6_A 151 ---------------------GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLM 209 (348)
T ss_dssp ---------------------CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHH
T ss_pred ---------------------CCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHH
Confidence 0113689999999999998875 349999999999999964322222111 01112
Q ss_pred -HHHHHHh-cCceeEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhh
Q psy13944 221 -AMYVAVG-LGIMRTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEE 292 (1217)
Q Consensus 221 -~li~~~~-~G~l~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~ 292 (1217)
.++..+. .+....+++ ++++.+++|||||+|++++.++..... .
T Consensus 210 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~----~------------------------ 261 (348)
T 1ek6_A 210 PYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE----Q------------------------ 261 (348)
T ss_dssp HHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT----T------------------------
T ss_pred HHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccc----c------------------------
Confidence 2222222 444444555 578899999999999999988875431 0
Q ss_pred hhhhccceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 293 SIKKLDVNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 293 ~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
..++.||++++ +++..|+++.+++.+|.+
T Consensus 262 ---~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 262 ---CGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291 (348)
T ss_dssp ---CCEEEEEECCSCCEEHHHHHHHHHHHHCSC
T ss_pred ---CCceEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 01378999988 899999999999998865
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=210.48 Aligned_cols=262 Identities=13% Similarity=0.066 Sum_probs=176.3
Q ss_pred CcccCCCCCCcccHHHHHH-HHhcC-hhH----------------HHhhh---cCccc--CCC---eEEEEccCCCCCCC
Q psy13944 8 LGHNGAKTCKHNSILWVAK-DFFAD-DAF----------------DRLRK---ENANF--TER---IVVLTADLQSDGLG 61 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~-~~l~~-~vf----------------d~Lr~---~~p~~--~~k---I~~V~GDl~d~~LG 61 (1217)
.-+||+.+.-|..+.++|. +.... .+. +.+.+ ..... ..+ +.++.+|++++
T Consensus 5 vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--- 81 (397)
T 1gy8_A 5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE--- 81 (397)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH---
T ss_pred EEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH---
Confidence 4478888888999999988 52111 111 11110 00000 124 89999999998
Q ss_pred CCHHHHHHhcC--C-ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccccccc
Q psy13944 62 LDEKEKKVLRE--D-VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 62 Ls~edl~~L~~--~-VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
+++..+++ + +|+|||+||..... +.+..++++|+.||.+++++|++. ++++|||+||+++|+....- .
T Consensus 82 ---~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS~~v~g~~~~~--~ 155 (397)
T 1gy8_A 82 ---DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMG--S 155 (397)
T ss_dssp ---HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC----
T ss_pred ---HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECCHHHhCCCCcc--c
Confidence 77877776 5 99999999987642 456789999999999999999984 78999999999998754310 0
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
..+.. ..++++. + ....+.|+.||+++|++++.++ .+++++++||+.|||+...+..|+.
T Consensus 156 ~~~~~----------~~~~E~~-----~---~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~ 217 (397)
T 1gy8_A 156 VSTNA----------EPIDINA-----K---KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEH 217 (397)
T ss_dssp ---CC----------CCBCTTS-----C---CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCC
T ss_pred ccccc----------cCcCccC-----C---CCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCcccccccc
Confidence 00000 0011110 0 0112689999999999998876 4899999999999999765444432
Q ss_pred cc-cchhHHHHH-----HHhcCce------------eEEee------CCCceeccccHHHHHHHHHHHHHhhhhhccccc
Q psy13944 214 KG-MNGLTAMYV-----AVGLGIM------------RTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLD 269 (1217)
Q Consensus 214 dn-~~g~~~li~-----~~~~G~l------------~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~ 269 (1217)
.. .......+. .+..|.. ..+++ ++++.+|+|||||+|++++.++..... .+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~----~~ 293 (397)
T 1gy8_A 218 YQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEK----LG 293 (397)
T ss_dssp STTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHT----CC
T ss_pred ccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccc----cc
Confidence 21 111222222 4444432 34555 678899999999999999988875433 00
Q ss_pred ccccccccccccccCCCCchhhhhhhhcc---ceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 270 TITRSDQNVEAKLIDPNNNVEEESIKKLD---VNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 270 ~~~~~~~~~~~hl~np~~~~~~~~~~~~g---~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
+. ..+ +.||++++ +++..|+++.+++.+|.+
T Consensus 294 ---------------~~---------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 328 (397)
T 1gy8_A 294 ---------------PN---------DKSKYFSVFNLGTSRGYSVREVIEVARKTTGHP 328 (397)
T ss_dssp ---------------TT---------TGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCC
T ss_pred ---------------cc---------cccCCCcEEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 00 012 68999988 899999999999998865
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=204.42 Aligned_cols=241 Identities=11% Similarity=-0.029 Sum_probs=178.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc-------c--cCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA-------N--FTERIVVLTADLQSDGLGLDEKEKKVLRED--VNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p-------~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDi 76 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|.... . ...++.++.+|++++ +++..++++ +|+
T Consensus 17 vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 17 ALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA------CSVQRAVIKAQPQE 89 (335)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCH------HHHHHHHHHHCCSE
T ss_pred EEEECCCChHHHHHHHHHHHCC-CeEEEEeCCCccccccchhhccccCceEEEECCCCCH------HHHHHHHHHcCCCE
Confidence 3489999999999999998742 222211111110 0 124689999999987 888888775 699
Q ss_pred EEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCC-CeEEEEcCccccccccc--ccccccCCCCChHHHHHHh
Q psy13944 77 VFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNL-DSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 77 ViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~l-k~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~ 150 (1217)
|||+||.... .+.....+++|+.|+.+++++|++. ++ ++|||+||.++|+.... ++|+....
T Consensus 90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~----------- 157 (335)
T 1rpn_A 90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQAERQDENTPFY----------- 157 (335)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSSSSBCTTSCCC-----------
T ss_pred EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCCCCCCCCcccCCC-----------
Confidence 9999998654 3466789999999999999999986 54 89999999999986432 33322111
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhc
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL 228 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~ 228 (1217)
..+.|+.||+.+|++++.+. .+++++++||+.+||+...+ ++.. .....++..+..
T Consensus 158 ------------------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~--~~~~~~~~~~~~ 215 (335)
T 1rpn_A 158 ------------------PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI--EFVT--RKVTDAVARIKL 215 (335)
T ss_dssp ------------------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHT
T ss_pred ------------------CCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCC--Ccch--HHHHHHHHHHHc
Confidence 12579999999999999876 58999999999999986532 1110 112344555566
Q ss_pred Cce-eEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 229 GIM-RTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 229 G~l-~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
|.. ....+++++.+++|||||+|++++.++.... ++.||++++
T Consensus 216 g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-----------------------------------~~~~ni~~~~ 260 (335)
T 1rpn_A 216 GKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-----------------------------------ADDYVVATGV 260 (335)
T ss_dssp TSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-----------------------------------CCCEEECCSC
T ss_pred CCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC-----------------------------------CCEEEEeCCC
Confidence 653 3456888999999999999999998875421 357999988
Q ss_pred ccCchHHHHHHHHhhchh
Q psy13944 307 NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~ 324 (1217)
+++..|+++.+++.+|.+
T Consensus 261 ~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 261 TTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp EEEHHHHHHHHHHTTTCC
T ss_pred CccHHHHHHHHHHHhCCC
Confidence 899999999999998865
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.9e-20 Score=205.30 Aligned_cols=246 Identities=11% Similarity=0.082 Sum_probs=176.6
Q ss_pred CcccCCCCCCcccHHHHHHHHh-cChhHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFF-ADDAFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAAT 83 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l-~~~vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~ 83 (1217)
.-+||+.+.-|..+.++|.+.. ...+.-..|.... ....++.++.+|++++ +++..+++ ++|+|||+||.
T Consensus 5 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~ 78 (312)
T 2yy7_A 5 ILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDF------NQIEHLVEVHKITDIYLMAAL 78 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCH------HHHHHHHHHTTCCEEEECCCC
T ss_pred EEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCH------HHHHHHHhhcCCCEEEECCcc
Confidence 4578999999999999998751 1222211111111 1123578999999987 88888887 89999999997
Q ss_pred CCc--ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 84 VKF--DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 84 v~f--~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
... .......+++|+.||.+++++|++. ++++|||+||.++|+... .++|....
T Consensus 79 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~-------------------- 137 (312)
T 2yy7_A 79 LSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVFGPTTPKENTPQYTIM-------------------- 137 (312)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGCCTTSCSSSBCSSCBC--------------------
T ss_pred CCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHhCCCCCCCCccccCcC--------------------
Confidence 643 2456788999999999999999984 789999999999998632 12222111
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEee
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQ 236 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g 236 (1217)
...+.|+.||+.+|++++.+. .+++++++||+.|||+...|..+.. ......+.....+.....++
T Consensus 138 ---------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 205 (312)
T 2yy7_A 138 ---------EPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKKYECFL 205 (312)
T ss_dssp ---------CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSEEEESS
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCCeEEec
Confidence 112679999999999998875 5899999999999998765532111 11223333333333344567
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNY 316 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ 316 (1217)
+++..++++||+|+|++++.++.+... . . ..++.||+++..++..|+++.
T Consensus 206 ~~~~~~~~i~v~Dva~a~~~~~~~~~~----~-~-------------------------~~~~~~ni~~~~~s~~e~~~~ 255 (312)
T 2yy7_A 206 SSETKMPMMYMDDAIDATINIMKAPVE----K-I-------------------------KIHSSYNLAAMSFTPTEIANE 255 (312)
T ss_dssp CTTCCEEEEEHHHHHHHHHHHHHSCGG----G-C-------------------------CCSSCEECCSEEECHHHHHHH
T ss_pred CCCceeeeeeHHHHHHHHHHHHhCccc----c-c-------------------------ccCceEEeCCCccCHHHHHHH
Confidence 788999999999999999988875433 0 0 014789998668999999999
Q ss_pred HHHhhc
Q psy13944 317 IKQNIK 322 (1217)
Q Consensus 317 ia~~~g 322 (1217)
+++.+|
T Consensus 256 i~~~~~ 261 (312)
T 2yy7_A 256 IKKHIP 261 (312)
T ss_dssp HHTTCT
T ss_pred HHHHCC
Confidence 998877
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-19 Score=205.43 Aligned_cols=259 Identities=17% Similarity=0.149 Sum_probs=178.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHh-hhcC----c--ccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRL-RKEN----A--NFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~L-r~~~----p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiV 77 (1217)
.-+||+.+.-|..+.++|.+.... .+.++. +... . ....++.++.+|++++ ++++.++++ +|+|
T Consensus 4 vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v 77 (347)
T 1orr_A 4 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK------NDVTRLITKYMPDSC 77 (347)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH------HHHHHHHHHHCCSEE
T ss_pred EEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCH------HHHHHHHhccCCCEE
Confidence 347899999999999999873221 111110 0000 0 0124689999999998 888888887 9999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCC-eEEEEcCccccccccc--cccc--ccCCCCChHHHHHH
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLD-SFIYVSTAYSNCNIKK--IEEK--FYEPLYTHIEMEQI 149 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk-~fV~vSTa~v~g~~~~--I~E~--~y~~p~dp~~~~~~ 149 (1217)
||+||..... +.+...+++|+.||.+++++|++. .++ +|||+||.++|+.... ..|. .+..+..+
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~------ 150 (347)
T 1orr_A 78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP------ 150 (347)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT------
T ss_pred EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHhCCCCcCCcccccccccccccc------
Confidence 9999986542 356788999999999999999985 455 9999999999986432 1111 00000000
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
...+++ . .....+.|+.||+.+|++++.++ .+++++++||+.|||+...+.. +. .....++..+.
T Consensus 151 -~~~~e~-----~---~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~---~~-~~~~~~~~~~~ 217 (347)
T 1orr_A 151 -NGYDES-----T---QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY---DQ-GWVGWFCQKAV 217 (347)
T ss_dssp -TCBCTT-----S---CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT---TB-CHHHHHHHHHH
T ss_pred -cCcccc-----C---CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCC---cC-cHHHHHHHHHH
Confidence 000111 0 01123679999999999999876 5899999999999999764321 10 11223444444
Q ss_pred cCc-----eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceee
Q psy13944 228 LGI-----MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYE 302 (1217)
Q Consensus 228 ~G~-----l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Yn 302 (1217)
.|. ....++++++.+++|+|+|+|++++.++..... ..|+.||
T Consensus 218 ~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~--------------------------------~~g~~~~ 265 (347)
T 1orr_A 218 EIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSK--------------------------------IRGNAFN 265 (347)
T ss_dssp HHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHH--------------------------------HTTCEEE
T ss_pred hCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhcccc--------------------------------CCCCEEE
Confidence 443 345678899999999999999999988864221 1267899
Q ss_pred ccCC-c--cCchHHHHHHHHhhchh
Q psy13944 303 INHG-N--YDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 303 I~sg-~--~s~~el~~~ia~~~g~~ 324 (1217)
++++ + ++..|+++.+++.+|.+
T Consensus 266 v~~~~~~~~s~~e~~~~i~~~~g~~ 290 (347)
T 1orr_A 266 IGGTIVNSLSLLELFKLLEDYCNID 290 (347)
T ss_dssp ESSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred eCCCCCCCccHHHHHHHHHHHhCCC
Confidence 9988 3 89999999999998865
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-19 Score=203.44 Aligned_cols=238 Identities=15% Similarity=0.124 Sum_probs=170.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--ccc-CCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--ANF-TERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|... ... ..+++++.||++++ +++..+++++|+|||+||..
T Consensus 16 ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~a~~~ 88 (342)
T 2x4g_A 16 YAVLGATGLLGHHAARAIRAAG-HDLVLIHRPSSQIQRLAYLEPECRVAEMLDH------AGLERALRGLDGVIFSAGYY 88 (342)
T ss_dssp EEEESTTSHHHHHHHHHHHHTT-CEEEEEECTTSCGGGGGGGCCEEEECCTTCH------HHHHHHTTTCSEEEEC----
T ss_pred EEEECCCcHHHHHHHHHHHHCC-CEEEEEecChHhhhhhccCCeEEEEecCCCH------HHHHHHHcCCCEEEECCccC
Confidence 5689999999999999998742 22221111111 111 12789999999998 88999999999999999976
Q ss_pred Cc-ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc---ccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 85 KF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK---IEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 85 ~f-~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~---I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
.. .+.....+++|+.|+.+++++|++. ++++|||+||.++|+.... ++|+....|
T Consensus 89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p-------------------- 147 (342)
T 2x4g_A 89 PSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQGLPGHEGLFYDS-------------------- 147 (342)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTSSCBCTTCCCSS--------------------
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCCCCCCCCCCCCc--------------------
Confidence 53 2455678999999999999999985 7899999999999886431 222211110
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCC-CCCcccccccchhHHHHHHHhcCceeEEeeCC
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVE-EPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNT 238 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~-eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~ 238 (1217)
. ....+.|+.||+.+|++++.++ .+++++++||+.|||+.. .+ + ...++..+..|....+ +
T Consensus 148 ---~--~~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~ 210 (342)
T 2x4g_A 148 ---L--PSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---V 210 (342)
T ss_dssp ---C--CTTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---E
T ss_pred ---c--ccccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---c
Confidence 0 0013689999999999999875 489999999999999865 21 1 1234555556654444 5
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIK 318 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia 318 (1217)
+..+++++++|+|++++.++.+... ++.||++++.++..|+++.++
T Consensus 211 ~~~~~~i~v~Dva~~~~~~~~~~~~----------------------------------g~~~~v~~~~~s~~e~~~~i~ 256 (342)
T 2x4g_A 211 AGQRNVIDAAEAGRGLLMALERGRI----------------------------------GERYLLTGHNLEMADLTRRIA 256 (342)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHHSCT----------------------------------TCEEEECCEEEEHHHHHHHHH
T ss_pred CCCcceeeHHHHHHHHHHHHhCCCC----------------------------------CceEEEcCCcccHHHHHHHHH
Confidence 7889999999999999988764322 568999888888889999999
Q ss_pred Hhhchh
Q psy13944 319 QNIKEK 324 (1217)
Q Consensus 319 ~~~g~~ 324 (1217)
+.+|.+
T Consensus 257 ~~~g~~ 262 (342)
T 2x4g_A 257 ELLGQP 262 (342)
T ss_dssp HHHTCC
T ss_pred HHhCCC
Confidence 998865
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-19 Score=204.35 Aligned_cols=245 Identities=13% Similarity=0.028 Sum_probs=178.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--cc------cCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--AN------FTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--p~------~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiV 77 (1217)
.-+||+.+.-|..+.++|.+... .+.-..|... +. ...++.++.+|++++ +++..++++ +|+|
T Consensus 12 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v 84 (357)
T 1rkx_A 12 VFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ------NKLLESIREFQPEIV 84 (357)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH------HHHHHHHHHHCCSEE
T ss_pred EEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccCH------HHHHHHHHhcCCCEE
Confidence 55899999999999999987422 2221111110 00 135789999999998 788887775 8999
Q ss_pred EEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc---ccccccCCCCChHHHHHHhh
Q psy13944 78 FHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK---IEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 78 iH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~---I~E~~y~~p~dp~~~~~~~~ 151 (1217)
||+||.... .+.+...+++|+.||.+++++|++++.+++|||+||.++||.... +.|....
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~------------- 151 (357)
T 1rkx_A 85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM------------- 151 (357)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB-------------
T ss_pred EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCC-------------
Confidence 999996432 245667899999999999999998755899999999999986431 2221110
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----------CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
...+.|+.||+++|++++.+. .+++++++||+.|||+...+. .....
T Consensus 152 ----------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~------~~~~~ 209 (357)
T 1rkx_A 152 ----------------GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL------DRIVP 209 (357)
T ss_dssp ----------------CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS------SCHHH
T ss_pred ----------------CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc------ccHHH
Confidence 112679999999999998875 289999999999999865321 11234
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccce
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVN 300 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~ 300 (1217)
.++..+..|....+ ++++..+++|||+|+|++++.++..... .+ ...++.
T Consensus 210 ~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~a~~~~~~~~~~----~~-------------------------~~~~~~ 259 (357)
T 1rkx_A 210 DILRAFEQSQPVII-RNPHAIRPWQHVLEPLSGYLLLAQKLYT----DG-------------------------AEYAEG 259 (357)
T ss_dssp HHHHHHHTTCCEEC-SCTTCEECCEETHHHHHHHHHHHHHHHH----TC-------------------------GGGCSE
T ss_pred HHHHHHhcCCCEEE-CCCCCeeccEeHHHHHHHHHHHHHhhhh----cC-------------------------CCCCce
Confidence 55666666765444 4567899999999999999988765321 00 012678
Q ss_pred eeccCC---ccCchHHHHHHHHhhchh
Q psy13944 301 YEINHG---NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 301 YnI~sg---~~s~~el~~~ia~~~g~~ 324 (1217)
||++++ +++..|+++.+++.+|.+
T Consensus 260 ~ni~~~~~~~~s~~e~~~~i~~~~g~~ 286 (357)
T 1rkx_A 260 WNFGPNDADATPVKNIVEQMVKYWGEG 286 (357)
T ss_dssp EECCCCGGGCEEHHHHHHHHHHHHCTT
T ss_pred EEECCCCCCcccHHHHHHHHHHHhCCC
Confidence 999973 789999999999998865
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-19 Score=200.48 Aligned_cols=240 Identities=18% Similarity=0.141 Sum_probs=176.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATV 84 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v 84 (1217)
-+||+.+.-|..+.++|.+.... .+.++...... ....++.++.+|++++ +++..+++ ++|+|||+||..
T Consensus 4 lVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~ 77 (311)
T 2p5y_A 4 LVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDK------EGVERAFREFRPTHVSHQAAQA 77 (311)
T ss_dssp EEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCH------HHHHHHHHHHCCSEEEECCSCC
T ss_pred EEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCH------HHHHHHHHhcCCCEEEECcccc
Confidence 36899999999999998864222 12222111111 1224678899999987 78887777 799999999976
Q ss_pred Ccc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCc-ccccc-cc--cccccccCCCCChHHHHHHhhcCCccc
Q psy13944 85 KFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA-YSNCN-IK--KIEEKFYEPLYTHIEMEQIINSCSHTE 157 (1217)
Q Consensus 85 ~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa-~v~g~-~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~ 157 (1217)
... +.....+++|+.|+.+++++|++. ++++|||+||. ++||. .. .++|....
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~------------------- 137 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPEGERAEETWPP------------------- 137 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCTTCCBCTTSCC-------------------
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCCCCCcCCCCCC-------------------
Confidence 532 355678999999999999999984 78999999998 88875 21 13332111
Q ss_pred ccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEe
Q psy13944 158 LTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVY 235 (1217)
Q Consensus 158 ~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~ 235 (1217)
...+.|+.||+.+|++++.++ .+++++++||+.|||+...+.. .......++..+..|....++
T Consensus 138 ----------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 203 (311)
T 2p5y_A 138 ----------RPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHG----EAGVVAIFAERVLKGLPVTLY 203 (311)
T ss_dssp ----------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSS----TTHHHHHHHHHHHHTCCEEEE
T ss_pred ----------CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCC----cCcHHHHHHHHHHcCCCcEEE
Confidence 112579999999999998875 5899999999999999764311 011123445555566655566
Q ss_pred -----eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccC
Q psy13944 236 -----QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYD 309 (1217)
Q Consensus 236 -----g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s 309 (1217)
++++..+++++|+|+|++++.++... ++.||++++ +++
T Consensus 204 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~------------------------------------~~~~~i~~~~~~s 247 (311)
T 2p5y_A 204 ARKTPGDEGCVRDYVYVGDVAEAHALALFSL------------------------------------EGIYNVGTGEGHT 247 (311)
T ss_dssp CSSSTTSCCCEECEEEHHHHHHHHHHHHHHC------------------------------------CEEEEESCSCCEE
T ss_pred ecccCCCCCeEEeeEEHHHHHHHHHHHHhCC------------------------------------CCEEEeCCCCCcc
Confidence 78889999999999999998877531 457999988 899
Q ss_pred chHHHHHHHHhhchh
Q psy13944 310 TTNHVNYIKQNIKEK 324 (1217)
Q Consensus 310 ~~el~~~ia~~~g~~ 324 (1217)
..|+++.+++.+|.+
T Consensus 248 ~~e~~~~i~~~~g~~ 262 (311)
T 2p5y_A 248 TREVLMAVAEAAGKA 262 (311)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998865
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-19 Score=200.75 Aligned_cols=244 Identities=9% Similarity=0.021 Sum_probs=172.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v~ 85 (1217)
.-+||+.+.-|..+.++|.+... .+.-..+. ..+|++++ +++..+++ ++|+|||+||...
T Consensus 6 ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r~-----------~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~ 67 (321)
T 1e6u_A 6 VFIAGHRGMVGSAIRRQLEQRGD-VELVLRTR-----------DELNLLDS------RAVHDFFASERIDQVYLAAAKVG 67 (321)
T ss_dssp EEEETTTSHHHHHHHHHHTTCTT-EEEECCCT-----------TTCCTTCH------HHHHHHHHHHCCSEEEECCCCCC
T ss_pred EEEECCCcHHHHHHHHHHHhCCC-eEEEEecC-----------ccCCccCH------HHHHHHHHhcCCCEEEEcCeecC
Confidence 44788888888888888865211 11110010 13788877 78888888 8999999999875
Q ss_pred c----ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 86 F----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 86 f----~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
. ......++++|+.||.+++++|++. ++++|||+||.++||... .++|.....
T Consensus 68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-------------------- 126 (321)
T 1e6u_A 68 GIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESELLQ-------------------- 126 (321)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGGTTS--------------------
T ss_pred CcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCCCCCcCcccccc--------------------
Confidence 2 3456788999999999999999984 789999999999998643 133322100
Q ss_pred ccccccCCCCC--ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh----cC-c
Q psy13944 160 VLNDILIKPMP--NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG----LG-I 230 (1217)
Q Consensus 160 ~~tp~~~~~~P--NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~----~G-~ 230 (1217)
....| +.|+.||+.+|++++.++ .+++++++||+.|||+...+.... ......++..+. .| .
T Consensus 127 ------~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~ 197 (321)
T 1e6u_A 127 ------GTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSN---SHVIPALLRRFHEATAQKAP 197 (321)
T ss_dssp ------SCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTC---SSHHHHHHHHHHHHHHHTCS
T ss_pred ------CCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCC---CccHHHHHHHHHHhhhcCCC
Confidence 01112 379999999999999876 589999999999999976532110 011233444433 34 3
Q ss_pred eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccC
Q psy13944 231 MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYD 309 (1217)
Q Consensus 231 l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s 309 (1217)
...++++++..+++|||||+|++++.++.+... ..+ .++ ...++.||++++ +++
T Consensus 198 ~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~----~~~------------~~~---------~~~~~~~ni~~~~~~s 252 (321)
T 1e6u_A 198 DVVVWGSGTPMREFLHVDDMAAASIHVMELAHE----VWL------------ENT---------QPMLSHINVGTGVDCT 252 (321)
T ss_dssp EEEEESCSCCEECEEEHHHHHHHHHHHHHSCHH----HHH------------HTS---------BTTBCCEEESCSCCEE
T ss_pred ceEEcCCCCEEEEeEEHHHHHHHHHHHHhCccc----ccc------------ccc---------ccCCceEEeCCCCCcc
Confidence 445678889999999999999999988875433 000 000 012578999988 899
Q ss_pred chHHHHHHHHhhchh
Q psy13944 310 TTNHVNYIKQNIKEK 324 (1217)
Q Consensus 310 ~~el~~~ia~~~g~~ 324 (1217)
..|+++.+++.+|.+
T Consensus 253 ~~e~~~~i~~~~g~~ 267 (321)
T 1e6u_A 253 IRELAQTIAKVVGYK 267 (321)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999999865
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8e-19 Score=197.78 Aligned_cols=243 Identities=14% Similarity=0.099 Sum_probs=174.7
Q ss_pred cccCCCCCCcccHHHHHHHHh-cChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccCC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFF-ADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATVK 85 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l-~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v~ 85 (1217)
-+||+.+.-|..+.++|.+.. ...+.-.-+.. ....++.++.+|++++ +++..+++ ++|+|||+||...
T Consensus 3 lVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~--~~~~~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~ 74 (317)
T 3ajr_A 3 LVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQ--RDTGGIKFITLDVSNR------DEIDRAVEKYSIDAIFHLAGILS 74 (317)
T ss_dssp EEESTTSTTHHHHHHHHHHHHCGGGEEEEESSC--CCCTTCCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCH
T ss_pred EEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCC--ccccCceEEEecCCCH------HHHHHHHhhcCCcEEEECCcccC
Confidence 468999999999999998751 22222111211 1122678899999998 88888877 8999999999754
Q ss_pred c--ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 86 F--DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 86 f--~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
. ......++++|+.||.+++++|++. ++++|||+||.++|+... .++|...
T Consensus 75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~----------------------- 130 (317)
T 3ajr_A 75 AKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETPKNKVPSITI----------------------- 130 (317)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSCSSSBCSSSC-----------------------
T ss_pred CccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCCCCCcccccc-----------------------
Confidence 2 2456778999999999999999984 789999999999998632 1222110
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCC
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNT 238 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~ 238 (1217)
....+.|+.||+.+|++++.+. .+++++++||+.+||+...|..+..+ .....+.....+.....++++
T Consensus 131 ------~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 201 (317)
T 3ajr_A 131 ------TRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD---YAVEIFYYAVKREKYKCYLAP 201 (317)
T ss_dssp ------CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSST---HHHHHHHHHHTTCCEEECSCT
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchh---HHHHHHHHHHhCCCceeecCc
Confidence 0113679999999999998775 58999999999999987654322211 112233333333333456677
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIK 318 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia 318 (1217)
+..++++||+|+|++++.++..... .. ..++.||++++.++..|+++.++
T Consensus 202 ~~~~~~i~v~Dva~a~~~~l~~~~~----~~--------------------------~~g~~~~i~~~~~s~~e~~~~i~ 251 (317)
T 3ajr_A 202 NRALPMMYMPDALKALVDLYEADRD----KL--------------------------VLRNGYNVTAYTFTPSELYSKIK 251 (317)
T ss_dssp TCCEEEEEHHHHHHHHHHHHHCCGG----GC--------------------------SSCSCEECCSEEECHHHHHHHHH
T ss_pred cceeeeeEHHHHHHHHHHHHhCCcc----cc--------------------------ccCceEecCCccccHHHHHHHHH
Confidence 8899999999999999988875433 00 01468999866889999999999
Q ss_pred Hhhc
Q psy13944 319 QNIK 322 (1217)
Q Consensus 319 ~~~g 322 (1217)
+.+|
T Consensus 252 ~~~~ 255 (317)
T 3ajr_A 252 ERIP 255 (317)
T ss_dssp TTCC
T ss_pred HHCC
Confidence 8876
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=198.35 Aligned_cols=250 Identities=14% Similarity=0.091 Sum_probs=171.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcc--------cCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENAN--------FTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIV 77 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~--------~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiV 77 (1217)
-+||+.+.-|..+.++|.+.... .+.++..+..+. ...++.++.+|++++ +++..+++ ++|+|
T Consensus 4 lVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~D~v 77 (338)
T 1udb_A 4 LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE------ALMTEILHDHAIDTV 77 (338)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCH------HHHHHHHHHTTCSEE
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCH------HHHHHHhhccCCCEE
Confidence 36888889999999999874221 111111000000 124688999999987 77777765 59999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhc
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
||+||..... +.....+++|+.||.+++++|++. ++++|||+||+++||.... ++|....
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~~~-------------- 142 (338)
T 1udb_A 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNPKIPYVESFPT-------------- 142 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSSBCTTSCC--------------
T ss_pred EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCCCCCcCcccCC--------------
Confidence 9999976432 345678999999999999999885 6789999999999885421 2222110
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccc--cchhHHHHHHHh
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLTAMYVAVG 227 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~~li~~~~ 227 (1217)
....+.|+.||+++|++++.++ .+++++|+||++|||+......|.... .......+....
T Consensus 143 --------------~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 208 (338)
T 1udb_A 143 --------------GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVA 208 (338)
T ss_dssp --------------CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHH
T ss_pred --------------CCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHH
Confidence 0112679999999999998875 389999999999999854333222111 011122233333
Q ss_pred c--CceeEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccc
Q psy13944 228 L--GIMRTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDV 299 (1217)
Q Consensus 228 ~--G~l~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~ 299 (1217)
. +....+.+ ++++.+|+|||+|+|++++.++..... . ..++
T Consensus 209 ~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~----~---------------------------~~~~ 257 (338)
T 1udb_A 209 VGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN----K---------------------------PGVH 257 (338)
T ss_dssp HTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT----C---------------------------CEEE
T ss_pred HhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhc----c---------------------------CCCc
Confidence 2 32223333 567889999999999999988865321 0 0136
Q ss_pred eeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 300 NYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 300 ~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
.||++++ +++..|+++.+++.+|.+
T Consensus 258 ~yni~~~~~~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 258 IYNLGAGVGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp EEEESCSCCEEHHHHHHHHHHHHTSC
T ss_pred EEEecCCCceeHHHHHHHHHHHhCCC
Confidence 8999988 899999999999998865
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=218.93 Aligned_cols=240 Identities=18% Similarity=0.158 Sum_probs=159.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhc---------------------CcccCCCeEEEEccCCC-CCCCCCHH
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKE---------------------NANFTERIVVLTADLQS-DGLGLDEK 65 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~---------------------~p~~~~kI~~V~GDl~d-~~LGLs~e 65 (1217)
.-.||+.+.-|..+.++|.+.. ..+....|.. ......+++++.||+++ +.++
T Consensus 153 VLVTGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~---- 227 (508)
T 4f6l_B 153 TLLTGATGFLGAYLIEALQGYS-HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV---- 227 (508)
T ss_dssp EEESCTTSHHHHHHHHHTBTTE-EEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC----
T ss_pred EEEECCccchHHHHHHHHHhcC-CEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC----
Confidence 4477888887877777774311 1111111111 11235789999999999 5444
Q ss_pred HHHHhcCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccc--cccccCCCCCh
Q psy13944 66 EKKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKI--EEKFYEPLYTH 143 (1217)
Q Consensus 66 dl~~L~~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I--~E~~y~~p~dp 143 (1217)
+..++|+|||+||.+++..++..+.++|+.||.+++++|++ +.++|||+||.++ |..... .+..+
T Consensus 228 ----~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~------ 294 (508)
T 4f6l_B 228 ----LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTF------ 294 (508)
T ss_dssp ----CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEE------
T ss_pred ----CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCccc------
Confidence 66899999999999988888888999999999999999998 6789999999999 542110 01000
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccc--cchhH
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLT 220 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~ 220 (1217)
+++.. .......+.|+.||+++|+++.++. .|++++|+||+.|||+...+. +..+ .....
T Consensus 295 ----------~E~~~-----~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~ 357 (508)
T 4f6l_B 295 ----------SEADV-----YKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFS 357 (508)
T ss_dssp ----------CTTCS-----CSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCC--CCTTCTTCHHH
T ss_pred ----------ccccc-----cccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCc--ccCCcchHHHH
Confidence 01100 0001234889999999999999987 899999999999999976432 1111 11234
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKK 296 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~ 296 (1217)
.++..+..+.... .++++..++++||||+|++++.++.... .+.+||+.+|.+.+|.++++.
T Consensus 358 ~~i~~~~~~~~~~-~~~g~~~~~~v~v~DvA~ai~~~~~~~~-------------~~~~~nl~~~~~~s~~el~~~ 419 (508)
T 4f6l_B 358 MVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNT-------------PQIIYHVLSPNKMPVKSLLEC 419 (508)
T ss_dssp HHHHHHTTCSEEE-TTGGGSEEECEEHHHHHHHHHHHTTBCC-------------SCSEEEESCSCEEEHHHHHHH
T ss_pred HHHHHHHHcCCCC-CCccCceEEEEcHHHHHHHHHHHHhCCC-------------CCCEEEeCCCCCCCHHHHHHH
Confidence 5555555543222 2346889999999999999998876432 256788888888888887776
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-19 Score=202.16 Aligned_cols=225 Identities=9% Similarity=-0.027 Sum_probs=166.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC-ccEEEEcCccCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED-VNIVFHVAATVKF 86 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~-VDiViH~AA~v~f 86 (1217)
.-+||+ +.-|..+.++|.+... .+.-..|. .+....+++++.+|++++ +++..++++ +|+|||+||...
T Consensus 6 ilVtGa-G~iG~~l~~~L~~~g~-~V~~~~r~-~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~d~vih~a~~~~- 75 (286)
T 3gpi_A 6 ILIAGC-GDLGLELARRLTAQGH-EVTGLRRS-AQPMPAGVQTLIADVTRP------DTLASIVHLRPEILVYCVAASE- 75 (286)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTC-CEEEEECT-TSCCCTTCCEEECCTTCG------GGCTTGGGGCCSEEEECHHHHH-
T ss_pred EEEECC-CHHHHHHHHHHHHCCC-EEEEEeCC-ccccccCCceEEccCCCh------HHHHHhhcCCCCEEEEeCCCCC-
Confidence 457884 8889999999987532 23222222 223457899999999998 777777777 999999999753
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 87 ~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
.......++|+.|+.+++++|++ .++++|||+||+++||.... ++|+....
T Consensus 76 -~~~~~~~~~n~~~~~~ll~a~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~------------------------- 128 (286)
T 3gpi_A 76 -YSDEHYRLSYVEGLRNTLSALEG-APLQHVFFVSSTGVYGQEVEEWLDEDTPPI------------------------- 128 (286)
T ss_dssp -HC-----CCSHHHHHHHHHHTTT-SCCCEEEEEEEGGGCCCCCSSEECTTSCCC-------------------------
T ss_pred -CCHHHHHHHHHHHHHHHHHHHhh-CCCCEEEEEcccEEEcCCCCCCCCCCCCCC-------------------------
Confidence 34456788999999999999998 58899999999999987542 33432111
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc
Q psy13944 165 LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 165 ~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~ 244 (1217)
..+.|+.||+++|++ .++ ++++|+||+.|||+... .++..+.. . ...++++..+++
T Consensus 129 ----p~~~Y~~sK~~~E~~-~~~---~~~~ilR~~~v~G~~~~-------------~~~~~~~~-~--~~~~~~~~~~~~ 184 (286)
T 3gpi_A 129 ----AKDFSGKRMLEAEAL-LAA---YSSTILRFSGIYGPGRL-------------RMIRQAQT-P--EQWPARNAWTNR 184 (286)
T ss_dssp ----CCSHHHHHHHHHHHH-GGG---SSEEEEEECEEEBTTBC-------------HHHHHTTC-G--GGSCSSBCEECE
T ss_pred ----CCChhhHHHHHHHHH-Hhc---CCeEEEecccccCCCch-------------hHHHHHHh-c--ccCCCcCceeEE
Confidence 126799999999999 665 99999999999998652 12222222 1 123677899999
Q ss_pred ccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhch
Q psy13944 245 VPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~ 323 (1217)
|+|+|+|++++.++..+.. . ..++.||++++ +++..|+++.+++.+|.
T Consensus 185 i~v~Dva~~~~~~~~~~~~----~---------------------------~~~~~~~~~~~~~~s~~e~~~~i~~~~g~ 233 (286)
T 3gpi_A 185 IHRDDGAAFIAYLIQQRSH----A---------------------------VPERLYIVTDNQPLPVHDLLRWLADRQGI 233 (286)
T ss_dssp EEHHHHHHHHHHHHHHHTT----S---------------------------CCCSEEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred EEHHHHHHHHHHHHhhhcc----C---------------------------CCCceEEEeCCCCCCHHHHHHHHHHHcCC
Confidence 9999999999998876521 0 02678999988 89999999999999987
Q ss_pred h
Q psy13944 324 K 324 (1217)
Q Consensus 324 ~ 324 (1217)
+
T Consensus 234 ~ 234 (286)
T 3gpi_A 234 A 234 (286)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=4e-19 Score=199.14 Aligned_cols=240 Identities=15% Similarity=0.070 Sum_probs=160.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc---ccCCCeEEEEccCCCCCCCCCHHHHHHhcCC-----ccEEEEc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA---NFTERIVVLTADLQSDGLGLDEKEKKVLRED-----VNIVFHV 80 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~-----VDiViH~ 80 (1217)
-+||+.+.-|..+.++|.+.....+.-.-|.... ....++. +.+|++++ +.++.++++ +|+|||+
T Consensus 3 lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~------~~~~~~~~~~~~~~~d~vi~~ 75 (310)
T 1eq2_A 3 IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKE------DFLIQIMAGEEFGDVEAIFHE 75 (310)
T ss_dssp EEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHH------HHHHHHHTTCCCSSCCEEEEC
T ss_pred EEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcce-eccccccH------HHHHHHHhccccCCCcEEEEC
Confidence 3688888889999998887531222111111100 0011233 67898877 778887764 9999999
Q ss_pred CccCCc-ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCccc
Q psy13944 81 AATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTE 157 (1217)
Q Consensus 81 AA~v~f-~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~ 157 (1217)
||.... ......++++|+.|+.+++++|++. ++ +|||+||.++||... .++|+...
T Consensus 76 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~~~~E~~~~------------------- 134 (310)
T 1eq2_A 76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDFIESREYE------------------- 134 (310)
T ss_dssp CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCSCBCSSGGGC-------------------
T ss_pred cccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhCCCCCCCCCCCCCC-------------------
Confidence 998754 3567789999999999999999986 66 999999999998643 13332211
Q ss_pred ccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEe
Q psy13944 158 LTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVY 235 (1217)
Q Consensus 158 ~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~ 235 (1217)
...+.|+.||+.+|++++.+. .+++++++||+.|||+...+.... ......++..+..|....++
T Consensus 135 ----------~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 201 (310)
T 1eq2_A 135 ----------KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSM---ASVAFHLNTQLNNGESPKLF 201 (310)
T ss_dssp ----------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGG---SCHHHHHHHHHHC-------
T ss_pred ----------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCcc---chHHHHHHHHHHcCCCcEEe
Confidence 112679999999999999876 689999999999999976431100 11223455666666655567
Q ss_pred eCCCc-eeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHH
Q psy13944 236 QNTSN-IVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNH 313 (1217)
Q Consensus 236 g~~~~-~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el 313 (1217)
++++. .++++||||+|++++.++.... ++.||++++ +++..|+
T Consensus 202 ~~g~~~~~~~i~v~Dva~~~~~~~~~~~-----------------------------------~~~~~i~~~~~~s~~e~ 246 (310)
T 1eq2_A 202 EGSENFKRDFVYVGDVADVNLWFLENGV-----------------------------------SGIFNLGTGRAESFQAV 246 (310)
T ss_dssp ------CBCEEEHHHHHHHHHHHHHHCC-----------------------------------CEEEEESCSCCBCHHHH
T ss_pred cCCCcceEccEEHHHHHHHHHHHHhcCC-----------------------------------CCeEEEeCCCccCHHHH
Confidence 78888 9999999999999998775311 457999988 8999999
Q ss_pred HHHHHHhhchh
Q psy13944 314 VNYIKQNIKEK 324 (1217)
Q Consensus 314 ~~~ia~~~g~~ 324 (1217)
++.+++.+|.+
T Consensus 247 ~~~i~~~~g~~ 257 (310)
T 1eq2_A 247 ADATLAYHKKG 257 (310)
T ss_dssp HHHC-------
T ss_pred HHHHHHHcCCC
Confidence 99999998865
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8.9e-19 Score=198.82 Aligned_cols=260 Identities=14% Similarity=0.091 Sum_probs=176.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH-------HhhhcCcc-cCCCeEEE-EccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD-------RLRKENAN-FTERIVVL-TADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd-------~Lr~~~p~-~~~kI~~V-~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+.... .+.+ .+.+.... ...+++++ .+|++++ ++++.+++++|+|
T Consensus 14 vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~d~v 87 (342)
T 1y1p_A 14 VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ------GAYDEVIKGAAGV 87 (342)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST------TTTTTTTTTCSEE
T ss_pred EEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh------HHHHHHHcCCCEE
Confidence 558999999999999999874221 1111 11111000 12578888 8999998 6777888899999
Q ss_pred EEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccc------ccccccccCCCCChHHHHHHhh
Q psy13944 78 FHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNI------KKIEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 78 iH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~------~~I~E~~y~~p~dp~~~~~~~~ 151 (1217)
||+||.......+...+++|+.|+.+++++|++..++++|||+||.++++.. ..++|+.+.. ........
T Consensus 88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~----~~~~~~~~ 163 (342)
T 1y1p_A 88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL----ESIDKAKT 163 (342)
T ss_dssp EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH----HHHHHHHH
T ss_pred EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCc----hhhhhhcc
Confidence 9999988776778889999999999999999854578999999999888542 1244433211 00000000
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
....... ...+.|+.||+++|++++.+. .+++++++||+.|||+...+... . .....++..+.
T Consensus 164 ---~~~~~~~------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~---~-~~~~~~~~~~~ 230 (342)
T 1y1p_A 164 ---LPESDPQ------KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ---S-GSTSGWMMSLF 230 (342)
T ss_dssp ---SCTTSTT------HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC---C-CHHHHHHHHHH
T ss_pred ---ccccccc------cchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC---C-ccHHHHHHHHH
Confidence 0000000 011579999999999998875 37899999999999997654211 1 13345566666
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCc
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGN 307 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~ 307 (1217)
.|....+.+++ ..+++++|+|+|++++.++..... .+..+...+++
T Consensus 231 ~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~---------------------------------~g~~~~~~g~~ 276 (342)
T 1y1p_A 231 NGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQI---------------------------------ERRRVYGTAGT 276 (342)
T ss_dssp TTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTC---------------------------------CSCEEEECCEE
T ss_pred cCCCccccccC-CcCCEeEHHHHHHHHHHHHcCccc---------------------------------CCceEEEeCCC
Confidence 66554444544 678999999999999988765332 13334333338
Q ss_pred cCchHHHHHHHHhhchh
Q psy13944 308 YDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 308 ~s~~el~~~ia~~~g~~ 324 (1217)
++..|+++.+++.+|..
T Consensus 277 ~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 277 FDWNTVLATFRKLYPSK 293 (342)
T ss_dssp ECHHHHHHHHHHHCTTS
T ss_pred CCHHHHHHHHHHHCCCc
Confidence 99999999999998754
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-19 Score=212.58 Aligned_cols=303 Identities=14% Similarity=0.085 Sum_probs=179.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------------HHhhhc---------CcccCCCeEEEEccCCCCCCCCCHHH
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------------DRLRKE---------NANFTERIVVLTADLQSDGLGLDEKE 66 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------------d~Lr~~---------~p~~~~kI~~V~GDl~d~~LGLs~ed 66 (1217)
.-+||+.+.-|..+.++|.+... .+. .++.+. ......++.++.||++++ +.
T Consensus 72 vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~------~~ 144 (427)
T 4f6c_A 72 TLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM------DD 144 (427)
T ss_dssp EEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---------CC
T ss_pred EEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc------cc
Confidence 44788888888888888844211 111 111110 011236899999999994 22
Q ss_pred HHHhcCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 67 KKVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 67 l~~L~~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
+. ...++|+|||+||...+..++...+++|+.||.+++++|++ ++++|||+||.++ |....-. ....+
T Consensus 145 l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~--~~~~~------ 212 (427)
T 4f6c_A 145 VV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDID--TEDVT------ 212 (427)
T ss_dssp CC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSS--CSCCE------
T ss_pred CC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCC--CCCcc------
Confidence 22 66899999999999887778888999999999999999998 6789999999998 5421100 00000
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccc--cchhHHHH
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLTAMY 223 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~~li 223 (1217)
++++.. .......+.|+.||+++|++++++. .+++++|+||+.|||+...+. |..+ ......++
T Consensus 213 ------~~E~~~-----~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~ 279 (427)
T 4f6c_A 213 ------FSEADV-----YKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVM 279 (427)
T ss_dssp ------ECTTCS-----CSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCC--CCTTGGGCHHHHHH
T ss_pred ------cccccc-----ccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCc--cccCcchHHHHHHH
Confidence 001100 0011234789999999999999977 799999999999999976442 1112 11234555
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeec
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEI 303 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI 303 (1217)
..+..+.... .++++..++++||||+|++++.++.... .+.+||+.++.+.+|.+.++...+ +.
T Consensus 280 ~~~~~~~~~~-~~~~~~~~~~v~v~DvA~ai~~~~~~~~-------------~g~~~~l~~~~~~s~~el~~~i~~-~g- 343 (427)
T 4f6c_A 280 NDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNT-------------PQIIYHVLSPNKMPVKSLLECVKR-KE- 343 (427)
T ss_dssp HHHHHSSEEE-HHHHTCEECCEEHHHHHHHHHHHTTSCC-------------CCSEEEESCSCCEEHHHHHHHHHS-SC-
T ss_pred HHHHhcCCCC-CccccceEEEeeHHHHHHHHHHHHcCCC-------------CCCEEEecCCCCCcHHHHHHHHHH-cC-
Confidence 5555543322 2346889999999999999998875432 246788888887877777765322 11
Q ss_pred cCCccCchHHHHHHHHhhchhhhcccCCCCCCCCCccchhhhhhcccccccccccc
Q psy13944 304 NHGNYDTTNHVNYIKQNIKEKFIDKYNNNVPDTDDSFKMSTQTQNLADSVISNQSV 359 (1217)
Q Consensus 304 ~sg~~s~~el~~~ia~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~l~~s~~~~~~~ 359 (1217)
-...+..+....+.+..-..+..-...........++++.+.+.++..+..||..
T Consensus 344 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~ 398 (427)
T 4f6c_A 344 -IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTI 398 (427)
T ss_dssp -CEEECHHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCC
T ss_pred -CcccCHHHHHHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCC
Confidence 1122333333333322000000000000011234567777776676666655543
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.9e-18 Score=194.92 Aligned_cols=240 Identities=14% Similarity=0.080 Sum_probs=174.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhh----hcCccc--CCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLR----KENANF--TERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr----~~~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~ 80 (1217)
.-+||+.+.-|..+.++|.+.... .+.++-. +..... ..++.++.+|+.++. +.++|+|||+
T Consensus 30 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~~d~vih~ 98 (343)
T 2b69_A 30 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----------YIEVDQIYHL 98 (343)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----------CCCCSEEEEC
T ss_pred EEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----------hcCCCEEEEC
Confidence 558999999999999999874221 1122110 000111 357899999999862 4679999999
Q ss_pred CccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCc
Q psy13944 81 AATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 81 AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
||.... .......+++|+.|+.+++++|++. +. +|||+||+++||... .++|..+..
T Consensus 99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~~~~E~~~~~---------------- 160 (343)
T 2b69_A 99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQSEDYWGH---------------- 160 (343)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBCTTCCCB----------------
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHhCCCCCCCCccccccc----------------
Confidence 998653 3466788999999999999999986 44 999999999998643 234432110
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeE
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRT 233 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~ 233 (1217)
..+ ....+.|+.||+++|++++.+. .+++++++||+.|||+...+..+ .....++..+..|....
T Consensus 161 -----~~~---~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~ 227 (343)
T 2b69_A 161 -----VNP---IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLT 227 (343)
T ss_dssp -----CCS---SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEE
T ss_pred -----CCC---CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcc-----cHHHHHHHHHHcCCCce
Confidence 000 0112569999999999998875 68999999999999997643211 12234555566676666
Q ss_pred EeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchH
Q psy13944 234 VYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTN 312 (1217)
Q Consensus 234 i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~e 312 (1217)
++++++..+++++|||+|++++.++... . ++.||++++ +++..|
T Consensus 228 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~----------------------------------~~~~~i~~~~~~s~~e 272 (343)
T 2b69_A 228 VYGSGSQTRAFQYVSDLVNGLVALMNSN-V----------------------------------SSPVNLGNPEEHTILE 272 (343)
T ss_dssp EESSSCCEEECEEHHHHHHHHHHHHTSS-C----------------------------------CSCEEESCCCEEEHHH
T ss_pred EcCCCCeEEeeEeHHHHHHHHHHHHhcC-C----------------------------------CCeEEecCCCCCcHHH
Confidence 7888899999999999999998776421 1 457999998 899999
Q ss_pred HHHHHHHhhchh
Q psy13944 313 HVNYIKQNIKEK 324 (1217)
Q Consensus 313 l~~~ia~~~g~~ 324 (1217)
+++.+++.+|.+
T Consensus 273 ~~~~i~~~~g~~ 284 (343)
T 2b69_A 273 FAQLIKNLVGSG 284 (343)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhCCC
Confidence 999999998865
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.1e-19 Score=197.86 Aligned_cols=226 Identities=15% Similarity=0.051 Sum_probs=164.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc--ccC---------CCeEEEEccCCCCCCCCCHHHHHHhcCCccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA--NFT---------ERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p--~~~---------~kI~~V~GDl~d~~LGLs~edl~~L~~~VDi 76 (1217)
.-+||+.+.-|..+.++|.+... .+.-..|...+ ... .+++++.+|++ ++|+
T Consensus 10 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------~~d~ 72 (321)
T 3vps_A 10 ILITGGAGFIGGHLARALVASGE-EVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------DVRL 72 (321)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC-CEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------TEEE
T ss_pred EEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------cCCE
Confidence 55899999999999999987532 22211121110 011 12233333332 7899
Q ss_pred EEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhh
Q psy13944 77 VFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 77 ViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~ 151 (1217)
|||+||.... .......++ |+.|+.+++++|++. ++++|||+||.++|+.... ++|+...
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~~~~~E~~~~------------- 137 (321)
T 3vps_A 73 VYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADTLPTPEDSPL------------- 137 (321)
T ss_dssp EEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTTSCC-------------
T ss_pred EEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCCCCCCCCCCC-------------
Confidence 9999998753 222334566 999999999999986 6899999999999987532 3332211
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCC-CEEEEecceeccCCCCCCcccccccchhHHHHHHHhc
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKL-PLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL 228 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gL-PvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~ 228 (1217)
...+.|+.||+.+|++++.++ .++ +++|+||+.|||+...+ ......++..+..
T Consensus 138 ----------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~ 194 (321)
T 3vps_A 138 ----------------SPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP-------DALVPRLCANLLT 194 (321)
T ss_dssp ----------------CCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-------TSHHHHHHHHHHH
T ss_pred ----------------CCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-------CChHHHHHHHHHc
Confidence 112679999999999999987 688 99999999999997643 1123455666667
Q ss_pred CceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-c
Q psy13944 229 GIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-N 307 (1217)
Q Consensus 229 G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~ 307 (1217)
|....++++++..+++|||+|+|++++.++..... | .||++++ +
T Consensus 195 ~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~----------------------------------g-~~~i~~~~~ 239 (321)
T 3vps_A 195 RNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP----------------------------------S-VVNFGSGQS 239 (321)
T ss_dssp HSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC----------------------------------S-EEEESCSCC
T ss_pred CCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC----------------------------------C-eEEecCCCc
Confidence 76667788899999999999999999887654322 5 8999988 8
Q ss_pred cCchHHHHHHHHhhchh
Q psy13944 308 YDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 308 ~s~~el~~~ia~~~g~~ 324 (1217)
++..|+++.++ .+|.+
T Consensus 240 ~s~~e~~~~i~-~~g~~ 255 (321)
T 3vps_A 240 LSVNDVIRILQ-ATSPA 255 (321)
T ss_dssp EEHHHHHHHHH-TTCTT
T ss_pred ccHHHHHHHHH-HhCCC
Confidence 99999999999 98876
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=198.58 Aligned_cols=241 Identities=15% Similarity=0.077 Sum_probs=177.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc---ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA---NFTERIVVLTADLQSDGLGLDEKEKKVLRE-----DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-----~VDiViH 79 (1217)
.-+||+.+.-|..+.++|.+.....+.-.-|.... ....++. +.+|++++ +.++.+++ ++|+|||
T Consensus 49 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~------~~~~~~~~~~~~~~~d~Vih 121 (357)
T 2x6t_A 49 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKE------DFLIQIMAGEEFGDVEAIFH 121 (357)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHH------HHHHHHHTTCCCSSCCEEEE
T ss_pred EEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcH------HHHHHHHhhcccCCCCEEEE
Confidence 45899999999999999988541222211111110 1122344 77898887 77777776 5999999
Q ss_pred cCccCCc-ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcc
Q psy13944 80 VAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHT 156 (1217)
Q Consensus 80 ~AA~v~f-~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~ 156 (1217)
+||.... ......++++|+.||.+++++|++. ++ +|||+||+++|+... .++|+...
T Consensus 122 ~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v~g~~~~~~~~E~~~~------------------ 181 (357)
T 2x6t_A 122 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDFIESREYE------------------ 181 (357)
T ss_dssp CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGCSCSSCCCSSGGGC------------------
T ss_pred CCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHHhCCCCCCCcCCcCCC------------------
Confidence 9998654 3567789999999999999999985 66 999999999998643 13332211
Q ss_pred cccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE
Q psy13944 157 ELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 157 ~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i 234 (1217)
...+.|+.||+.+|++++.+. .+++++++||+.|||+...+.. ... .....++..+..|....+
T Consensus 182 -----------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~-~~~--~~~~~~~~~~~~~~~~~~ 247 (357)
T 2x6t_A 182 -----------KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG-SMA--SVAFHLNTQLNNGESPKL 247 (357)
T ss_dssp -----------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCG-GGS--CHHHHHHHHHHTTCCCEE
T ss_pred -----------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCc-ccc--hHHHHHHHHHHcCCCcEE
Confidence 112679999999999999886 5899999999999999764321 111 122345566666766566
Q ss_pred eeCCCc-eeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchH
Q psy13944 235 YQNTSN-IVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTN 312 (1217)
Q Consensus 235 ~g~~~~-~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~e 312 (1217)
+++++. .+++++|+|+|++++.++.... ++.||++++ +++..|
T Consensus 248 ~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-----------------------------------~~~~~i~~~~~~s~~e 292 (357)
T 2x6t_A 248 FEGSENFKRDFVYVGDVADVNLWFLENGV-----------------------------------SGIFNLGTGRAESFQA 292 (357)
T ss_dssp ETTGGGCEECEEEHHHHHHHHHHHHHHCC-----------------------------------CEEEEESCSCCEEHHH
T ss_pred eCCCCcceEccEEHHHHHHHHHHHHhcCC-----------------------------------CCeEEecCCCcccHHH
Confidence 777888 9999999999999998775311 468999988 899999
Q ss_pred HHHHHHHhhchh
Q psy13944 313 HVNYIKQNIKEK 324 (1217)
Q Consensus 313 l~~~ia~~~g~~ 324 (1217)
+++.+++.+|.+
T Consensus 293 ~~~~i~~~~g~~ 304 (357)
T 2x6t_A 293 VADATLAYHKKG 304 (357)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999998865
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-18 Score=197.35 Aligned_cols=241 Identities=12% Similarity=0.008 Sum_probs=176.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc-------c--------cCCCeEEEEccCCCCCCCCCHHHHHHhcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA-------N--------FTERIVVLTADLQSDGLGLDEKEKKVLRE 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p-------~--------~~~kI~~V~GDl~d~~LGLs~edl~~L~~ 72 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|.... . ...++.++.+|++++ +++..+++
T Consensus 27 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~ 99 (375)
T 1t2a_A 27 ALITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDS------TCLVKIIN 99 (375)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCH------HHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCC-CEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCH------HHHHHHHH
Confidence 4589999999999999998742 222211111100 0 124688999999987 78888777
Q ss_pred C--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCC---CeEEEEcCcccccccc--cccccccCCCCC
Q psy13944 73 D--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNL---DSFIYVSTAYSNCNIK--KIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~--VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~l---k~fV~vSTa~v~g~~~--~I~E~~y~~p~d 142 (1217)
+ +|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|||+||.++|+... .++|+...
T Consensus 100 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~---- 174 (375)
T 1t2a_A 100 EVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQEIPQKETTPF---- 174 (375)
T ss_dssp HHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC----
T ss_pred hcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhhCCCCCCCCCccCCC----
Confidence 5 69999999987643 456678999999999999999984 55 7999999999998643 13332111
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
...+.|+.||+.+|++++.++ .+++++++||+.+||+...+ ++.. ....
T Consensus 175 -------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~--~~~~--~~~~ 225 (375)
T 1t2a_A 175 -------------------------YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGA--NFVT--RKIS 225 (375)
T ss_dssp -------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHH
T ss_pred -------------------------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCC--Ccch--HHHH
Confidence 112679999999999998876 58999999999999986532 1211 1122
Q ss_pred HHHHHHhcCce-eEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccc
Q psy13944 221 AMYVAVGLGIM-RTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDV 299 (1217)
Q Consensus 221 ~li~~~~~G~l-~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~ 299 (1217)
.++..+..|.. ....++++..+++|||||+|++++.++.... ++
T Consensus 226 ~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-----------------------------------~~ 270 (375)
T 1t2a_A 226 RSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-----------------------------------PE 270 (375)
T ss_dssp HHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-----------------------------------CC
T ss_pred HHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-----------------------------------Cc
Confidence 34444555643 3456888999999999999999998875321 35
Q ss_pred eeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 300 NYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 300 ~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
.||++++ +++..|+++.+++.+|.+
T Consensus 271 ~~ni~~~~~~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 271 DFVIATGEVHSVREFVEKSFLHIGKT 296 (375)
T ss_dssp CEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred eEEEeCCCcccHHHHHHHHHHHhCCC
Confidence 7999988 899999999999999875
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-18 Score=191.52 Aligned_cols=226 Identities=13% Similarity=0.021 Sum_probs=167.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiViH~AA~v~f 86 (1217)
-+||+.+.-|..+.++|. - ...+.-.-|. + .++.+|++++ +++..++++ +|+|||+||....
T Consensus 4 lVtGatG~iG~~l~~~L~-~-g~~V~~~~r~--~------~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~ 67 (299)
T 1n2s_A 4 LLFGKTGQVGWELQRSLA-P-VGNLIALDVH--S------KEFCGDFSNP------KGVAETVRKLRPDVIVNAAAHTAV 67 (299)
T ss_dssp EEECTTSHHHHHHHHHTT-T-TSEEEEECTT--C------SSSCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCH
T ss_pred EEECCCCHHHHHHHHHhh-c-CCeEEEeccc--c------ccccccCCCH------HHHHHHHHhcCCCEEEECcccCCH
Confidence 368888888888888886 2 2333221111 1 2357899987 788888776 9999999998764
Q ss_pred ---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 87 ---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 87 ---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
......++++|+.|+.+++++|++. ++ +|||+||.++|+.... ++|....
T Consensus 68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~~~~~~~~~E~~~~----------------------- 122 (299)
T 1n2s_A 68 DKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFPGTGDIPWQETDAT----------------------- 122 (299)
T ss_dssp HHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSCCCTTCCBCTTSCC-----------------------
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEeCCCCCCCCCCCCC-----------------------
Confidence 3567789999999999999999885 55 7999999999986431 3332111
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCce
Q psy13944 162 NDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNI 241 (1217)
Q Consensus 162 tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~ 241 (1217)
...+.|+.||+.+|++++.+.. +++++||+.|||+... + ....++..+..|....+.+ +..
T Consensus 123 ------~p~~~Y~~sK~~~E~~~~~~~~--~~~ilRp~~v~G~~~~---~------~~~~~~~~~~~~~~~~~~~--~~~ 183 (299)
T 1n2s_A 123 ------SPLNVYGKTKLAGEKALQDNCP--KHLIFRTSWVYAGKGN---N------FAKTMLRLAKERQTLSVIN--DQY 183 (299)
T ss_dssp ------CCSSHHHHHHHHHHHHHHHHCS--SEEEEEECSEECSSSC---C------HHHHHHHHHHHCSEEEEEC--SCE
T ss_pred ------CCccHHHHHHHHHHHHHHHhCC--CeEEEeeeeecCCCcC---c------HHHHHHHHHhcCCCEEeec--Ccc
Confidence 1126799999999999998764 8999999999998642 1 1234555555665544554 488
Q ss_pred eccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHh
Q psy13944 242 VDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQN 320 (1217)
Q Consensus 242 ~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~ 320 (1217)
++++|++|+|++++.++.+... .. ..++.||++++ +++..|+++.+++.
T Consensus 184 ~~~i~v~Dva~~~~~~~~~~~~----~~--------------------------~~~~~~~i~~~~~~s~~e~~~~i~~~ 233 (299)
T 1n2s_A 184 GAPTGAELLADCTAHAIRVALN----KP--------------------------EVAGLYHLVAGGTTTWHDYAALVFDE 233 (299)
T ss_dssp ECCEEHHHHHHHHHHHHHHHHH----CG--------------------------GGCEEEECCCBSCEEHHHHHHHHHHH
T ss_pred cCCeeHHHHHHHHHHHHHHhcc----cc--------------------------ccCceEEEeCCCCCCHHHHHHHHHHH
Confidence 9999999999999988876532 00 01578999998 89999999999999
Q ss_pred hchh
Q psy13944 321 IKEK 324 (1217)
Q Consensus 321 ~g~~ 324 (1217)
+|.+
T Consensus 234 ~g~~ 237 (299)
T 1n2s_A 234 ARKA 237 (299)
T ss_dssp HHHH
T ss_pred hCCC
Confidence 9876
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.2e-18 Score=191.37 Aligned_cols=247 Identities=15% Similarity=0.098 Sum_probs=178.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhc------Chh--HHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhc-CCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA------DDA--FDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLR-EDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~------~~v--fd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~-~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+... ..+ .++-..... ....++.++.+|++++ +++..++ .++|+|
T Consensus 17 vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~d~v 90 (342)
T 2hrz_A 17 IAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAP------GEAEKLVEARPDVI 90 (342)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTST------THHHHHHHTCCSEE
T ss_pred EEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCH------HHHHHHHhcCCCEE
Confidence 44899999999999999988541 222 221111000 1234688999999998 7777777 589999
Q ss_pred EEcCccCCc--ccCHHHHHHHHHHHHHHHHHHhHhcC----CCCeEEEEcCcccccccc--cccccccCCCCChHHHHHH
Q psy13944 78 FHVAATVKF--DEHFQTAFEINCKGTEKLLKMAEEMK----NLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 78 iH~AA~v~f--~e~l~~a~~vNV~GT~~LLelAk~~~----~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~ 149 (1217)
||+||.... .+.+...+++|+.||.+++++|++.. .+++|||+||.++|+... .++|+...
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~----------- 159 (342)
T 2hrz_A 91 FHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHT----------- 159 (342)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCC-----------
T ss_pred EECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCC-----------
Confidence 999997642 24567889999999999999998863 378999999999988642 23332211
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceecc-CCCCCCccccccc--chhHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMP-VVEEPCPMWVKGM--NGLTAMYV 224 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G-~~~eP~pGWidn~--~g~~~li~ 224 (1217)
...+.|+.||+++|++++++. .+++.+++|++.||| |.. .... .....++.
T Consensus 160 ------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~------~~~~~~~~~~~~~~ 215 (342)
T 2hrz_A 160 ------------------TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGK------PNAAASGFFSNILR 215 (342)
T ss_dssp ------------------CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSS------CCCSGGGHHHHHHH
T ss_pred ------------------CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCC------CcchhHHHHHHHHH
Confidence 112679999999999999876 579999999999998 432 1111 12234555
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN 304 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~ 304 (1217)
.+..|....++++++...++++|+|+|++++.++..... . ...++.||++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~----~--------------------------~~~~~~~ni~ 265 (342)
T 2hrz_A 216 EPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVE----K--------------------------VGPRRNLSMP 265 (342)
T ss_dssp HHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHH----H--------------------------HCSCCEEECC
T ss_pred HHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhcccc----c--------------------------cCCccEEEcC
Confidence 666776655666667788899999999999988765432 0 0125689996
Q ss_pred CCccCchHHHHHHHHhhchhh
Q psy13944 305 HGNYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 305 sg~~s~~el~~~ia~~~g~~~ 325 (1217)
+.+++..|+++.+++.+|.+.
T Consensus 266 g~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 266 GLSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp CEEEEHHHHHHHHHHHHCHHH
T ss_pred CCCCCHHHHHHHHHHHcCccc
Confidence 448999999999999998763
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-18 Score=189.04 Aligned_cols=219 Identities=17% Similarity=0.079 Sum_probs=163.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v~ 85 (1217)
.-+||+.+.-|..+.++|.+... .+.-.. + +.+|++++ +++..+++ ++|+|||+||...
T Consensus 8 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~---------r---~~~D~~d~------~~~~~~~~~~~~d~vi~~a~~~~ 68 (287)
T 3sc6_A 8 VIITGANGQLGKQLQEELNPEEY-DIYPFD---------K---KLLDITNI------SQVQQVVQEIRPHIIIHCAAYTK 68 (287)
T ss_dssp EEEESTTSHHHHHHHHHSCTTTE-EEEEEC---------T---TTSCTTCH------HHHHHHHHHHCCSEEEECCCCCC
T ss_pred EEEECCCCHHHHHHHHHHHhCCC-EEEEec---------c---cccCCCCH------HHHHHHHHhcCCCEEEECCcccC
Confidence 45788888888877777654211 111100 0 24888887 88888877 6999999999876
Q ss_pred cc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 86 FD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 86 f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
.. +.....+++|+.|+.+++++|++. ++ +|||+||.++|+... .++|+....
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~~~~~~E~~~~~--------------------- 125 (287)
T 3sc6_A 69 VDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDRPEGYDEFHNPA--------------------- 125 (287)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCCSSCBCTTSCCC---------------------
T ss_pred hHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCCCCCCCCCCCCC---------------------
Confidence 43 467789999999999999999986 55 799999999998653 233332111
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCc
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSN 240 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~ 240 (1217)
..+.|+.||+.+|++++.+.. +++++||+.|||+.... ....++..+..|....+.+ ++
T Consensus 126 --------p~~~Y~~sK~~~E~~~~~~~~--~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~--~~ 184 (287)
T 3sc6_A 126 --------PINIYGASKYAGEQFVKELHN--KYFIVRTSWLYGKYGNN---------FVKTMIRLGKEREEISVVA--DQ 184 (287)
T ss_dssp --------CCSHHHHHHHHHHHHHHHHCS--SEEEEEECSEECSSSCC---------HHHHHHHHHTTCSEEEEEC--SC
T ss_pred --------CCCHHHHHHHHHHHHHHHhCC--CcEEEeeeeecCCCCCc---------HHHHHHHHHHcCCCeEeec--Cc
Confidence 126799999999999998864 78999999999986421 1234555555666555554 48
Q ss_pred eeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHH
Q psy13944 241 IVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQ 319 (1217)
Q Consensus 241 ~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~ 319 (1217)
.++++|++|+|++++.++.+.. ++.||++++ +++..|+++.+++
T Consensus 185 ~~~~i~v~Dva~~~~~~~~~~~-----------------------------------~~~~~i~~~~~~s~~e~~~~i~~ 229 (287)
T 3sc6_A 185 IGSPTYVADLNVMINKLIHTSL-----------------------------------YGTYHVSNTGSCSWFEFAKKIFS 229 (287)
T ss_dssp EECCEEHHHHHHHHHHHHTSCC-----------------------------------CEEEECCCBSCEEHHHHHHHHHH
T ss_pred ccCceEHHHHHHHHHHHHhCCC-----------------------------------CCeEEEcCCCcccHHHHHHHHHH
Confidence 8999999999999998775321 358999998 8999999999999
Q ss_pred hhchh
Q psy13944 320 NIKEK 324 (1217)
Q Consensus 320 ~~g~~ 324 (1217)
.+|.+
T Consensus 230 ~~g~~ 234 (287)
T 3sc6_A 230 YANMK 234 (287)
T ss_dssp HHTCC
T ss_pred HcCCC
Confidence 99865
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.74 E-value=7e-18 Score=210.51 Aligned_cols=256 Identities=9% Similarity=0.038 Sum_probs=182.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--cc--cCCCeEEEEccCCCCCCCCCHHH-HHHhcCCccEEEEcCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--AN--FTERIVVLTADLQSDGLGLDEKE-KKVLREDVNIVFHVAA 82 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--p~--~~~kI~~V~GDl~d~~LGLs~ed-l~~L~~~VDiViH~AA 82 (1217)
.-+||+.+.-|..+.++|.+.-...+.-..|... .. ...+++++.||++++ ++ ++.+++++|+|||+||
T Consensus 318 VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~------~~~~~~~~~~~D~Vih~Aa 391 (660)
T 1z7e_A 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIH------SEWIEYHVKKCDVVLPLVA 391 (660)
T ss_dssp EEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTC------HHHHHHHHHHCSEEEECCC
T ss_pred EEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCc------HHHHHHhhcCCCEEEECce
Confidence 4489999999999999998741112221111111 11 135789999999987 54 6667788999999999
Q ss_pred cCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccc
Q psy13944 83 TVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTE 157 (1217)
Q Consensus 83 ~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~ 157 (1217)
.... ...+...+++|+.||.+++++|++. + ++|||+||.++||.... ++|+....+
T Consensus 392 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~----------------- 452 (660)
T 1z7e_A 392 IATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLI----------------- 452 (660)
T ss_dssp CCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCSSSBCTTTCCEE-----------------
T ss_pred ecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcCCCCCcccCCCccccc-----------------
Confidence 8652 3456788999999999999999985 5 89999999999986431 333221100
Q ss_pred ccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccc-cchhHHHHHHHhcCceeEE
Q psy13944 158 LTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKG-MNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 158 ~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn-~~g~~~li~~~~~G~l~~i 234 (1217)
..| .....+.|+.||+++|++++.++ .+++++++||+.|||+...+..++.-+ ......++..+..|....+
T Consensus 453 ---~~p--~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 527 (660)
T 1z7e_A 453 ---VGP--VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL 527 (660)
T ss_dssp ---ECC--TTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEE
T ss_pred ---cCc--ccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEE
Confidence 000 00112579999999999998875 589999999999999976432111000 1123455666677776667
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC--ccCchH
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG--NYDTTN 312 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg--~~s~~e 312 (1217)
++++++.++++||+|+|++++.++..... . ..++.||++++ +++..|
T Consensus 528 ~g~g~~~~~~i~v~Dva~ai~~~l~~~~~----~---------------------------~~g~~~ni~~~~~~~s~~e 576 (660)
T 1z7e_A 528 IDGGKQKRCFTDIRDGIEALYRIIENAGN----R---------------------------CDGEIINIGNPENEASIEE 576 (660)
T ss_dssp EGGGCCEEECEEHHHHHHHHHHHHHCGGG----T---------------------------TTTEEEEECCGGGEEEHHH
T ss_pred eCCCCeEEEEEEHHHHHHHHHHHHhCccc----c---------------------------CCCeEEEECCCCCCcCHHH
Confidence 78889999999999999999988875432 0 12678999987 589999
Q ss_pred HHHHHHHhhchh
Q psy13944 313 HVNYIKQNIKEK 324 (1217)
Q Consensus 313 l~~~ia~~~g~~ 324 (1217)
+++.+++.+|.+
T Consensus 577 l~~~i~~~~g~~ 588 (660)
T 1z7e_A 577 LGEMLLASFEKH 588 (660)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHhcCC
Confidence 999999998875
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-18 Score=198.69 Aligned_cols=211 Identities=12% Similarity=0.023 Sum_probs=168.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccC-CCCCCCCCHHHHHHhcCCccEEEEcCccCCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADL-QSDGLGLDEKEKKVLREDVNIVFHVAATVKFD 87 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl-~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~ 87 (1217)
-+||+.+.-|..+.++|.+... ++++.+|. .++ +++..+++++|+|||+||..+..
T Consensus 4 lVtGatG~iG~~l~~~L~~~g~-----------------~~v~~~d~~~d~------~~l~~~~~~~d~Vih~a~~~~~~ 60 (369)
T 3st7_A 4 VITGAKGFVGKNLKADLTSTTD-----------------HHIFEVHRQTKE------EELESALLKADFIVHLAGVNRPE 60 (369)
T ss_dssp EEETTTSHHHHHHHHHHHHHCC-----------------CEEEECCTTCCH------HHHHHHHHHCSEEEECCCSBCTT
T ss_pred EEECCCCHHHHHHHHHHHhCCC-----------------CEEEEECCCCCH------HHHHHHhccCCEEEECCcCCCCC
Confidence 4688888888888888866321 46788888 665 89999999999999999987643
Q ss_pred cCHHHHHHHHHHHHHHHHHHhHhcCCCC-eEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccC
Q psy13944 88 EHFQTAFEINCKGTEKLLKMAEEMKNLD-SFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILI 166 (1217)
Q Consensus 88 e~l~~a~~vNV~GT~~LLelAk~~~~lk-~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~ 166 (1217)
....++++|+.|+.+++++|++. +++ +|||+||+++++
T Consensus 61 -~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~--------------------------------------- 99 (369)
T 3st7_A 61 -HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ--------------------------------------- 99 (369)
T ss_dssp -CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS---------------------------------------
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC---------------------------------------
Confidence 34457788999999999999985 555 999999998865
Q ss_pred CCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc
Q psy13944 167 KPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 167 ~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~ 244 (1217)
++.|+.||+++|+++++++ .+++++|+||++|||++..|.. ......++..+..|....+ ++++..+++
T Consensus 100 ---~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 170 (369)
T 3st7_A 100 ---DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNY-----NSVIATFCYKIARNEEIQV-NDRNVELTL 170 (369)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTS-----SCHHHHHHHHHHTTCCCCC-SCTTCEEEE
T ss_pred ---CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCc-----chHHHHHHHHHHcCCCeEe-cCCCeEEEE
Confidence 1579999999999999876 5899999999999999876521 1123345555666654333 578999999
Q ss_pred ccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhch
Q psy13944 245 VPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~ 323 (1217)
+||||+|++++.++..... . .++.||++++ .++..|+++.+++.+|.
T Consensus 171 i~v~Dva~~~~~~l~~~~~----~----------------------------~~~~~~i~~~~~~s~~e~~~~~~~~~g~ 218 (369)
T 3st7_A 171 NYVDDIVAEIKRAIEGTPT----I----------------------------ENGVPTVPNVFKVTLGEIVDLLYKFKQS 218 (369)
T ss_dssp EEHHHHHHHHHHHHHTCCC----E----------------------------ETTEECCSCCEEEEHHHHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHhCCcc----c----------------------------CCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence 9999999999998875443 0 1578999988 89999999999999887
Q ss_pred h
Q psy13944 324 K 324 (1217)
Q Consensus 324 ~ 324 (1217)
+
T Consensus 219 ~ 219 (369)
T 3st7_A 219 R 219 (369)
T ss_dssp H
T ss_pred C
Confidence 6
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.8e-18 Score=188.18 Aligned_cols=215 Identities=12% Similarity=0.020 Sum_probs=158.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc---ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA---NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
.-+||+ +.-|..+.++|.+.. ..+.-..|.... ....+++++.+|+++. + ++++|+|||+||..
T Consensus 8 ilVtGa-G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~------~-----~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 8 LLSFGH-GYTARVLSRALAPQG-WRIIGTSRNPDQMEAIRASGAEPLLWPGEEP------S-----LDGVTHLLISTAPD 74 (286)
T ss_dssp EEEETC-CHHHHHHHHHHGGGT-CEEEEEESCGGGHHHHHHTTEEEEESSSSCC------C-----CTTCCEEEECCCCB
T ss_pred EEEECC-cHHHHHHHHHHHHCC-CEEEEEEcChhhhhhHhhCCCeEEEeccccc------c-----cCCCCEEEECCCcc
Confidence 457887 888999998887642 222211111110 0125799999999985 2 57899999999987
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
....+ .+.+++++|++. .++++|||+||+++||.... ++|+....
T Consensus 75 ~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~---------------------- 122 (286)
T 3ius_A 75 SGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLT---------------------- 122 (286)
T ss_dssp TTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCC----------------------
T ss_pred ccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCC----------------------
Confidence 64432 257889999875 47899999999999987542 34432211
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCce
Q psy13944 162 NDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNI 241 (1217)
Q Consensus 162 tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~ 241 (1217)
..+.|+.||+.+|++++++ .+++++|+||+.|||+...++. .+..|....+.++ ++.
T Consensus 123 -------p~~~Y~~sK~~~E~~~~~~-~~~~~~ilRp~~v~G~~~~~~~--------------~~~~~~~~~~~~~-~~~ 179 (286)
T 3ius_A 123 -------PTAARGRWRVMAEQQWQAV-PNLPLHVFRLAGIYGPGRGPFS--------------KLGKGGIRRIIKP-GQV 179 (286)
T ss_dssp -------CCSHHHHHHHHHHHHHHHS-TTCCEEEEEECEEEBTTBSSST--------------TSSSSCCCEEECT-TCC
T ss_pred -------CCCHHHHHHHHHHHHHHhh-cCCCEEEEeccceECCCchHHH--------------HHhcCCccccCCC-Ccc
Confidence 1267999999999999998 7899999999999999764421 1234544445544 688
Q ss_pred eccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHh
Q psy13944 242 VDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQN 320 (1217)
Q Consensus 242 ~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~ 320 (1217)
+++|||+|+|++++.++.+... ++.||++++ +++..|+++.+++.
T Consensus 180 ~~~i~v~Dva~a~~~~~~~~~~----------------------------------g~~~~i~~~~~~s~~e~~~~i~~~ 225 (286)
T 3ius_A 180 FSRIHVEDIAQVLAASMARPDP----------------------------------GAVYNVCDDEPVPPQDVIAYAAEL 225 (286)
T ss_dssp BCEEEHHHHHHHHHHHHHSCCT----------------------------------TCEEEECCSCCBCHHHHHHHHHHH
T ss_pred cceEEHHHHHHHHHHHHhCCCC----------------------------------CCEEEEeCCCCccHHHHHHHHHHH
Confidence 9999999999999988875433 678999988 89999999999999
Q ss_pred hchh
Q psy13944 321 IKEK 324 (1217)
Q Consensus 321 ~g~~ 324 (1217)
+|.+
T Consensus 226 ~g~~ 229 (286)
T 3ius_A 226 QGLP 229 (286)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 9875
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=189.68 Aligned_cols=241 Identities=12% Similarity=0.019 Sum_probs=175.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc-------c--cCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA-------N--FTERIVVLTADLQSDGLGLDEKEKKVLRED--VNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p-------~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDi 76 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|.... . ...+++++.+|++++ +++..++++ +|+
T Consensus 6 vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 6 ALITGIRGQDGAYLAKLLLEKG-YEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEF------SNIIRTIEKVQPDE 78 (345)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCH------HHHHHHHHHHCCSE
T ss_pred EEEECCCChHHHHHHHHHHHCC-CEEEEEECCCcccccccHhhccccCceeEEECCCCCH------HHHHHHHHhcCCCE
Confidence 4589999999999999998742 222111111100 0 124689999999987 788887775 599
Q ss_pred EEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCC-CeEEEEcCccccccccc--ccccccCCCCChHHHHHHh
Q psy13944 77 VFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNL-DSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 77 ViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~l-k~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~ 150 (1217)
|||+||.... .+.+...+++|+.||.+++++|+++ ++ ++|||+||.++||.... ++|....
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~e~~~~------------ 145 (345)
T 2z1m_A 79 VYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQEIPQTEKTPF------------ 145 (345)
T ss_dssp EEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSSSSBCTTSCC------------
T ss_pred EEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCCCCCCccCCC------------
Confidence 9999998653 3457789999999999999999986 55 79999999999986431 2222111
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhc
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL 228 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~ 228 (1217)
...+.|+.||+.+|++++.++ .+++++++|++++|||+..+. +. ......++..+..
T Consensus 146 -----------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~--~~--~~~~~~~~~~~~~ 204 (345)
T 2z1m_A 146 -----------------YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIE--FV--TRKITYSLARIKY 204 (345)
T ss_dssp -----------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT--SH--HHHHHHHHHHHHT
T ss_pred -----------------CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCc--ch--hHHHHHHHHHHHc
Confidence 112679999999999998876 589999999999999864221 10 0111233444455
Q ss_pred Cce-eEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 229 GIM-RTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 229 G~l-~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
|.. ....++++..+++++++|+|++++.++.... ++.||++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-----------------------------------~~~~~i~~~~ 249 (345)
T 2z1m_A 205 GLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-----------------------------------PDDYVIATGE 249 (345)
T ss_dssp TSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-----------------------------------CCCEEECCSC
T ss_pred CCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-----------------------------------CceEEEeCCC
Confidence 543 3356778899999999999999998775321 357999988
Q ss_pred ccCchHHHHHHHHhhchh
Q psy13944 307 NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~ 324 (1217)
+++..|+++.+++.+|.+
T Consensus 250 ~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 250 THTVREFVEKAAKIAGFD 267 (345)
T ss_dssp CEEHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHhCCC
Confidence 899999999999999875
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=9.9e-18 Score=193.12 Aligned_cols=242 Identities=12% Similarity=0.047 Sum_probs=174.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhc-----Ccc-------cCCCeEEEEccCCCCCCCCCHHHHHHhcCC-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKE-----NAN-------FTERIVVLTADLQSDGLGLDEKEKKVLRED- 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~-----~p~-------~~~kI~~V~GDl~d~~LGLs~edl~~L~~~- 73 (1217)
.-+||+.+.-|..+.++|.+.... .+.++-... ... ...++.++.+|++++ +++..++++
T Consensus 4 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~ 77 (372)
T 1db3_A 4 ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT------SNLTRILREV 77 (372)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCH------HHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCH------HHHHHHHHhc
Confidence 347899999999999999874221 111111000 000 124788999999987 788877775
Q ss_pred -ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCC---CeEEEEcCcccccccc--cccccccCCCCChH
Q psy13944 74 -VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNL---DSFIYVSTAYSNCNIK--KIEEKFYEPLYTHI 144 (1217)
Q Consensus 74 -VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~l---k~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~ 144 (1217)
+|+|||+||..... +.+...+++|+.|+.+++++|++. ++ ++|||+||.++|+... .++|....
T Consensus 78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~------ 150 (372)
T 1db3_A 78 QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLVQEIPQKETTPF------ 150 (372)
T ss_dssp CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC------
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhhhCCCCCCCCCccCCC------
Confidence 69999999986432 456678899999999999999984 56 7999999999998643 13332111
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
...+.|+.||+.+|++++.++ .+++++++||+.+||+...+ ++.. .....+
T Consensus 151 -----------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~ 203 (372)
T 1db3_A 151 -----------------------YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGE--TFVT--RKITRA 203 (372)
T ss_dssp -----------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHH
T ss_pred -----------------------CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCC--cchh--hHHHHH
Confidence 112679999999999998876 58999999999999987532 1111 112344
Q ss_pred HHHHhcCce-eEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcccee
Q psy13944 223 YVAVGLGIM-RTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNY 301 (1217)
Q Consensus 223 i~~~~~G~l-~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Y 301 (1217)
+..+..|.. ....+++++.+|+|||||+|++++.++.... ++.|
T Consensus 204 ~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-----------------------------------~~~~ 248 (372)
T 1db3_A 204 IANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-----------------------------------PEDF 248 (372)
T ss_dssp HHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-----------------------------------CCCE
T ss_pred HHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-----------------------------------CceE
Confidence 455566653 3456888999999999999999987654211 3579
Q ss_pred eccCC-ccCchHHHHHHHHhhchh
Q psy13944 302 EINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 302 nI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
|++++ +++..|+++.+++.+|.+
T Consensus 249 ni~~~~~~s~~e~~~~i~~~~g~~ 272 (372)
T 1db3_A 249 VIATGVQYSVRQFVEMAAAQLGIK 272 (372)
T ss_dssp EECCCCCEEHHHHHHHHHHTTTEE
T ss_pred EEcCCCceeHHHHHHHHHHHhCCC
Confidence 99988 899999999999999875
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.9e-18 Score=191.29 Aligned_cols=233 Identities=12% Similarity=0.085 Sum_probs=169.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhc--Cc---ccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKE--NA---NFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~--~p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~ 80 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|.. .. ....++.++.+|++++ +++..+++ ++|+|||+
T Consensus 23 vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~------~~~~~~~~~~~~D~vih~ 95 (330)
T 2pzm_A 23 ILITGGAGCLGSNLIEHWLPQG-HEILVIDNFATGKREVLPPVAGLSVIEGSVTDA------GLLERAFDSFKPTHVVHS 95 (330)
T ss_dssp EEEETTTSHHHHHHHHHHGGGT-CEEEEEECCSSSCGGGSCSCTTEEEEECCTTCH------HHHHHHHHHHCCSEEEEC
T ss_pred EEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCccchhhhhccCCceEEEeeCCCH------HHHHHHHhhcCCCEEEEC
Confidence 4589999999999999997642 2222111111 11 1125789999999998 88888888 89999999
Q ss_pred CccCCcc-cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 81 AATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 81 AA~v~f~-e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
||..... ..... +++|+.|+.+++++|.+. ++++|||+||.++|+..... + .|. +++.
T Consensus 96 A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~~-~----~~~------------~E~~-- 154 (330)
T 2pzm_A 96 AAAYKDPDDWAED-AATNVQGSINVAKAASKA-GVKRLLNFQTALCYGRPATV-P----IPI------------DSPT-- 154 (330)
T ss_dssp CCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGGGCSCSSS-S----BCT------------TCCC--
T ss_pred CccCCCccccChh-HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCccC-C----CCc------------CCCC--
Confidence 9987542 11123 899999999999999985 68899999999998754210 0 010 1111
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCC
Q psy13944 160 VLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTS 239 (1217)
Q Consensus 160 ~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~ 239 (1217)
...+.|+.||+.+|++++.+ +++.+++||+++|||.. . .+ ....++..+..|. .+++++.
T Consensus 155 --------~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~-~~------~~~~~~~~~~~~~--~~~~~~~ 214 (330)
T 2pzm_A 155 --------APFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-A-IG------PIPTFYKRLKAGQ--KCFCSDT 214 (330)
T ss_dssp --------CCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-C-SS------HHHHHHHHHHTTC--CCCEESC
T ss_pred --------CCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-C-CC------HHHHHHHHHHcCC--EEeCCCC
Confidence 11267999999999999887 89999999999999864 1 11 1233444555554 4456666
Q ss_pred ceeccccHHHHHH-HHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHH
Q psy13944 240 NIVDMVPGDLVVN-ILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYI 317 (1217)
Q Consensus 240 ~~~D~VpVDdVvn-Aii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~i 317 (1217)
.+++++++|+|+ +++.++.. . . ++.||++++ +++..|+++.+
T Consensus 215 -~~~~i~~~Dva~~a~~~~~~~--~--------------------------------~-g~~~~v~~~~~~s~~e~~~~i 258 (330)
T 2pzm_A 215 -VRDFLDMSDFLAIADLSLQEG--R--------------------------------P-TGVFNVSTGEGHSIKEVFDVV 258 (330)
T ss_dssp -EECEEEHHHHHHHHHHHTSTT--C--------------------------------C-CEEEEESCSCCEEHHHHHHHH
T ss_pred -EecceeHHHHHHHHHHHHhhc--C--------------------------------C-CCEEEeCCCCCCCHHHHHHHH
Confidence 899999999999 98876542 1 0 568999998 89999999999
Q ss_pred HHhhchh
Q psy13944 318 KQNIKEK 324 (1217)
Q Consensus 318 a~~~g~~ 324 (1217)
++.+|.+
T Consensus 259 ~~~~g~~ 265 (330)
T 2pzm_A 259 LDYVGAT 265 (330)
T ss_dssp HHHHTCC
T ss_pred HHHhCCC
Confidence 9998865
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-17 Score=187.16 Aligned_cols=234 Identities=15% Similarity=0.052 Sum_probs=145.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v~ 85 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|.... .+ ++.+|++++ +++..+++ ++|+|||+||...
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~--~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~ 72 (315)
T 2ydy_A 5 VLVTGATGLLGRAVHKEFQQNN-WHAVGCGFRRAR---PK--FEQVNLLDS------NAVHHIIHDFQPHVIVHCAAERR 72 (315)
T ss_dssp EEEETTTSHHHHHHHHHHHTTT-CEEEEEC-----------------------------CHHHHHHHCCSEEEECC----
T ss_pred EEEECCCcHHHHHHHHHHHhCC-CeEEEEccCCCC---CC--eEEecCCCH------HHHHHHHHhhCCCEEEECCcccC
Confidence 4578999999999999988742 222211111111 12 788999987 66666666 4899999999865
Q ss_pred cc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc-cccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 86 FD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 86 f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~-~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
.. +.+...+++|+.|+.+++++|++. +. +|||+||.++|+... .++|+...
T Consensus 73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~~~~~~~E~~~~----------------------- 127 (315)
T 2ydy_A 73 PDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDGTNPPYREEDIP----------------------- 127 (315)
T ss_dssp ---------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSSSCSBCTTSCC-----------------------
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCCCCCCCCCCCCC-----------------------
Confidence 42 455678999999999999999985 44 999999999988622 13332211
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh-cCceeEEeeCCCc
Q psy13944 162 NDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG-LGIMRTVYQNTSN 240 (1217)
Q Consensus 162 tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~-~G~l~~i~g~~~~ 240 (1217)
...+.|+.||+.+|++++.+ +++++++||+.|||+...+..++.. .++..+. .|....+. ++.
T Consensus 128 ------~~~~~Y~~sK~~~e~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~ 191 (315)
T 2ydy_A 128 ------APLNLYGKTKLDGEKAVLEN--NLGAAVLRIPILYGEVEKLEESAVT------VMFDKVQFSNKSANMD--HWQ 191 (315)
T ss_dssp ------CCCSHHHHHHHHHHHHHHHH--CTTCEEEEECSEECSCSSGGGSTTG------GGHHHHHCCSSCEEEE--CSS
T ss_pred ------CCcCHHHHHHHHHHHHHHHh--CCCeEEEeeeeeeCCCCcccccHHH------HHHHHHHhcCCCeeec--cCc
Confidence 11367999999999999987 4678999999999987653222221 2233444 45443333 467
Q ss_pred eeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHH
Q psy13944 241 IVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQ 319 (1217)
Q Consensus 241 ~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~ 319 (1217)
.+++++++|+|++++.++.+... . ...++.||++++ +++..|+++.+++
T Consensus 192 ~~~~i~v~Dva~a~~~~~~~~~~----~--------------------------~~~~~~~~i~~~~~~s~~e~~~~i~~ 241 (315)
T 2ydy_A 192 QRFPTHVKDVATVCRQLAEKRML----D--------------------------PSIKGTFHWSGNEQMTKYEMACAIAD 241 (315)
T ss_dssp BBCCEEHHHHHHHHHHHHHHHHT----C--------------------------TTCCEEEECCCSCCBCHHHHHHHHHH
T ss_pred eECcEEHHHHHHHHHHHHHhhcc----c--------------------------cCCCCeEEEcCCCcccHHHHHHHHHH
Confidence 89999999999999988875421 0 002678999998 8999999999999
Q ss_pred hhchh
Q psy13944 320 NIKEK 324 (1217)
Q Consensus 320 ~~g~~ 324 (1217)
.+|.+
T Consensus 242 ~~g~~ 246 (315)
T 2ydy_A 242 AFNLP 246 (315)
T ss_dssp HTTCC
T ss_pred HhCCC
Confidence 99875
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=188.82 Aligned_cols=240 Identities=16% Similarity=0.144 Sum_probs=170.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhc----ChhHHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcCC---ccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA----DDAFDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRED---VNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~----~~vfd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~~---VDiVi 78 (1217)
.-+||+.+.-|..+.++|.+... ..+.-..|..... ...+++++.||++++ +++..++++ +|+||
T Consensus 4 vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~d~vi 77 (364)
T 2v6g_A 4 ALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDP------DDSQAKLSPLTDVTHVF 77 (364)
T ss_dssp EEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSH------HHHHHHHTTCTTCCEEE
T ss_pred EEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCH------HHHHHHHhcCCCCCEEE
Confidence 34788888888888888876331 2222211221111 134789999999987 888888888 99999
Q ss_pred EcCccCCcccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEE-------EEcCcccccccc----cccccccCCCCChHHH
Q psy13944 79 HVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFI-------YVSTAYSNCNIK----KIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 79 H~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV-------~vSTa~v~g~~~----~I~E~~y~~p~dp~~~ 146 (1217)
|+||... .+....+++|+.||.+++++|++. +++++|| |+||.++||... .++|+...
T Consensus 78 h~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~-------- 147 (364)
T 2v6g_A 78 YVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPR-------- 147 (364)
T ss_dssp ECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCC--------
T ss_pred ECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccC--------
Confidence 9999764 457789999999999999999884 2789998 899999988642 12232111
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CC-CCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DK-LPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~g-LPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
...++.| ..+|+++.++. .+ ++++|+||+.|||+...+.. +...+..++
T Consensus 148 --------------------~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~ 199 (364)
T 2v6g_A 148 --------------------LKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMM----NLVGTLCVY 199 (364)
T ss_dssp --------------------CSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSS----CHHHHHHHH
T ss_pred --------------------Cccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCccc----chHHHHHHH
Confidence 1123678 45899998876 44 99999999999999764321 111112233
Q ss_pred HHH--hcCceeEEeeCC---CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcc
Q psy13944 224 VAV--GLGIMRTVYQNT---SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLD 298 (1217)
Q Consensus 224 ~~~--~~G~l~~i~g~~---~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g 298 (1217)
..+ ..|....+++++ ....++++|||+|++++.++.++.. .+
T Consensus 200 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~---------------------------------~g 246 (364)
T 2v6g_A 200 AAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA---------------------------------KN 246 (364)
T ss_dssp HHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG---------------------------------TT
T ss_pred HHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC---------------------------------CC
Confidence 333 256554556666 3457888999999999998875433 26
Q ss_pred ceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 299 VNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 299 ~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
+.||++++ +++..|+++.+++.+|.+
T Consensus 247 ~~~ni~~~~~~s~~e~~~~i~~~~g~~ 273 (364)
T 2v6g_A 247 EAFNVSNGDVFKWKHFWKVLAEQFGVE 273 (364)
T ss_dssp EEEEECCSCCBCHHHHHHHHHHHHTCC
T ss_pred ceEEecCCCcCCHHHHHHHHHHHhCCC
Confidence 78999998 899999999999999875
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-17 Score=192.01 Aligned_cols=241 Identities=11% Similarity=-0.002 Sum_probs=175.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc-------cc-------CC-CeEEEEccCCCCCCCCCHHHHHHhcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA-------NF-------TE-RIVVLTADLQSDGLGLDEKEKKVLRE 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p-------~~-------~~-kI~~V~GDl~d~~LGLs~edl~~L~~ 72 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|.... .. .. ++.++.+|++++ +++..+++
T Consensus 31 vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~ 103 (381)
T 1n7h_A 31 ALITGITGQDGSYLTEFLLGKG-YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDA------SSLRRWID 103 (381)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCH------HHHHHHHH
T ss_pred EEEEcCCchHHHHHHHHHHHCC-CEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCH------HHHHHHHH
Confidence 4589999999999999998742 222211111110 01 12 788999999987 78887777
Q ss_pred C--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCC-----eEEEEcCccccccccc-ccccccCCCC
Q psy13944 73 D--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLD-----SFIYVSTAYSNCNIKK-IEEKFYEPLY 141 (1217)
Q Consensus 73 ~--VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk-----~fV~vSTa~v~g~~~~-I~E~~y~~p~ 141 (1217)
+ +|+|||+||..... +.+...+++|+.|+.+++++|++. .++ +|||+||.++||.... ++|+...
T Consensus 104 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~--- 179 (381)
T 1n7h_A 104 VIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEMFGSTPPPQSETTPF--- 179 (381)
T ss_dssp HHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCC---
T ss_pred hcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHHhCCCCCCCCCCCCC---
Confidence 5 69999999987643 456678999999999999999884 455 9999999999986431 2222111
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
...+.|+.||+.+|++++.++ .+++++++|++++|||...+ ++.. ...
T Consensus 180 --------------------------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~ 229 (381)
T 1n7h_A 180 --------------------------HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKI 229 (381)
T ss_dssp --------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHH
T ss_pred --------------------------CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCC--cchh--HHH
Confidence 112679999999999999876 58999999999999986432 1111 011
Q ss_pred HHHHHHHhcCce-eEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcc
Q psy13944 220 TAMYVAVGLGIM-RTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLD 298 (1217)
Q Consensus 220 ~~li~~~~~G~l-~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g 298 (1217)
..++..+..|.. ....++++..+++++|+|+|++++.++.... +
T Consensus 230 ~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-----------------------------------~ 274 (381)
T 1n7h_A 230 TRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK-----------------------------------P 274 (381)
T ss_dssp HHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS-----------------------------------C
T ss_pred HHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC-----------------------------------C
Confidence 233444555643 3356788899999999999999998775311 3
Q ss_pred ceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 299 VNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 299 ~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
+.||++++ +++..|+++.+++.+|.+
T Consensus 275 ~~~~i~~~~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 275 DDYVVATEEGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp CEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred CeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence 57999998 899999999999998864
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.7e-17 Score=183.33 Aligned_cols=220 Identities=15% Similarity=0.045 Sum_probs=163.9
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCcc
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAAT 83 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~ 83 (1217)
++.-.||+.+.-|..+.++|.+.. ..+.-..|. .+|++++ +++..+++ ++|+|||+||.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~------------~~Dl~d~------~~~~~~~~~~~~d~vih~A~~ 73 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ------------DLDITNV------LAVNKFFNEKKPNVVINCAAH 73 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT------------TCCTTCH------HHHHHHHHHHCCSEEEECCCC
T ss_pred ceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc------------cCCCCCH------HHHHHHHHhcCCCEEEECCcc
Confidence 345589999999988888886521 111110010 4788887 78888877 79999999998
Q ss_pred CCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc--cccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 84 VKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 84 v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
.... +.....+++|+.|+.+++++|++. ++ +|||+||.++|+... .++|....
T Consensus 74 ~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~~~~~~E~~~~-------------------- 131 (292)
T 1vl0_A 74 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEAKEPITEFDEV-------------------- 131 (292)
T ss_dssp CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCCSSCBCTTSCC--------------------
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCCCCCCCCCCCC--------------------
Confidence 7642 466789999999999999999985 56 999999999998643 23332211
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCC
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNT 238 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~ 238 (1217)
...+.|+.||+.+|++++.+. .+++++||+.|||+ .. ++ ...++..+..|....+.+
T Consensus 132 ---------~~~~~Y~~sK~~~E~~~~~~~--~~~~~lR~~~v~G~-~~---~~------~~~~~~~~~~~~~~~~~~-- 188 (292)
T 1vl0_A 132 ---------NPQSAYGKTKLEGENFVKALN--PKYYIVRTAWLYGD-GN---NF------VKTMINLGKTHDELKVVH-- 188 (292)
T ss_dssp ---------CCCSHHHHHHHHHHHHHHHHC--SSEEEEEECSEESS-SS---CH------HHHHHHHHHHCSEEEEES--
T ss_pred ---------CCccHHHHHHHHHHHHHHhhC--CCeEEEeeeeeeCC-Cc---Ch------HHHHHHHHhcCCcEEeec--
Confidence 112679999999999999875 47999999999998 31 11 223444455565544444
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYI 317 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~i 317 (1217)
+...++++++|+|++++.++... . ++.||++++ +++..|+++.+
T Consensus 189 ~~~~~~i~v~Dva~~~~~~~~~~-~----------------------------------~~~~~i~~~~~~s~~e~~~~i 233 (292)
T 1vl0_A 189 DQVGTPTSTVDLARVVLKVIDEK-N----------------------------------YGTFHCTCKGICSWYDFAVEI 233 (292)
T ss_dssp SCEECCEEHHHHHHHHHHHHHHT-C----------------------------------CEEEECCCBSCEEHHHHHHHH
T ss_pred CeeeCCccHHHHHHHHHHHHhcC-C----------------------------------CcEEEecCCCCccHHHHHHHH
Confidence 57899999999999999887653 3 568999998 89999999999
Q ss_pred HHhhchh
Q psy13944 318 KQNIKEK 324 (1217)
Q Consensus 318 a~~~g~~ 324 (1217)
++.+|.+
T Consensus 234 ~~~~g~~ 240 (292)
T 1vl0_A 234 FRLTGID 240 (292)
T ss_dssp HHHHCCC
T ss_pred HHHhCCC
Confidence 9999865
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.71 E-value=4e-17 Score=186.17 Aligned_cols=229 Identities=16% Similarity=0.179 Sum_probs=167.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--cc-c--CCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--AN-F--TERIVVLTADLQSDGLGLDEKEKKVLRED--VNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--p~-~--~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiViH~ 80 (1217)
.-+||+.+.-|..+.++|.+.. ..+.-..|... .. . ..++.++.+|++++ ++++.++++ +|+|||+
T Consensus 24 vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 24 VFITGICGQIGSHIAELLLERG-DKVVGIDNFATGRREHLKDHPNLTFVEGSIADH------ALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGSCCCTTEEEEECCTTCH------HHHHHHHHHHCCSEEEEC
T ss_pred EEEeCCccHHHHHHHHHHHHCC-CEEEEEECCCccchhhHhhcCCceEEEEeCCCH------HHHHHHHhccCCcEEEEC
Confidence 4589999999999999998743 22221111111 11 1 15789999999998 888888877 9999999
Q ss_pred CccCCcc-cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccc----ccc-cccccccCCCCChHHHHHHhhcCC
Q psy13944 81 AATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNC----NIK-KIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 81 AA~v~f~-e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g----~~~-~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
||..... ..... +++|+.|+.+++++|++. ++++|||+||.++|+ ... .++|
T Consensus 97 A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~g~~~~~~~~~~~E-------------------- 154 (333)
T 2q1w_A 97 AASYKDPDDWYND-TLTNCVGGSNVVQAAKKN-NVGRFVYFQTALCYGVKPIQQPVRLDH-------------------- 154 (333)
T ss_dssp CCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGCSCCCSSSBCTTS--------------------
T ss_pred ceecCCCccCChH-HHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCcccCCCCcCC--------------------
Confidence 9986542 11112 899999999999999984 789999999999987 321 1111
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHH-hcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeE
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVRE-KMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRT 233 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~-~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~ 233 (1217)
+. .+..+.|+.||+++|++++. +. +++++||+.+||+... . .....++..+..|. .
T Consensus 155 -~~---------~p~~~~Y~~sK~~~E~~~~~s~~---~~~ilR~~~v~gp~~~--~------~~~~~~~~~~~~~~--~ 211 (333)
T 2q1w_A 155 -PR---------NPANSSYAISKSANEDYLEYSGL---DFVTFRLANVVGPRNV--S------GPLPIFFQRLSEGK--K 211 (333)
T ss_dssp -CC---------CCTTCHHHHHHHHHHHHHHHHTC---CEEEEEESEEESTTCC--S------SHHHHHHHHHHTTC--C
T ss_pred -CC---------CCCCCchHHHHHHHHHHHHhhhC---CeEEEeeceEECcCCc--C------cHHHHHHHHHHcCC--e
Confidence 11 01115799999999999998 76 8999999999998621 1 11234455555565 3
Q ss_pred EeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchH
Q psy13944 234 VYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTN 312 (1217)
Q Consensus 234 i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~e 312 (1217)
+++ ++..+++++++|+|++++.++.... ++.||++++ +++..|
T Consensus 212 ~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-----------------------------------g~~~~v~~~~~~s~~e 255 (333)
T 2q1w_A 212 CFV-TKARRDFVFVKDLARATVRAVDGVG-----------------------------------HGAYHFSSGTDVAIKE 255 (333)
T ss_dssp CEE-EECEECEEEHHHHHHHHHHHHTTCC-----------------------------------CEEEECSCSCCEEHHH
T ss_pred eeC-CCceEeeEEHHHHHHHHHHHHhcCC-----------------------------------CCEEEeCCCCCccHHH
Confidence 445 6778999999999999988764211 468999988 899999
Q ss_pred HHHHHHHhhchh
Q psy13944 313 HVNYIKQNIKEK 324 (1217)
Q Consensus 313 l~~~ia~~~g~~ 324 (1217)
+++.+++.+|.+
T Consensus 256 ~~~~i~~~~g~~ 267 (333)
T 2q1w_A 256 LYDAVVEAMALP 267 (333)
T ss_dssp HHHHHHHHTTCS
T ss_pred HHHHHHHHhCCC
Confidence 999999998865
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.8e-17 Score=204.12 Aligned_cols=260 Identities=14% Similarity=0.071 Sum_probs=175.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcC--------cccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKEN--------ANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~--------p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDi 76 (1217)
.-+||+.+.-|..+.++|.+.... .+.++..... .....++.++.+|++++ +++..+++ ++|+
T Consensus 14 ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~------~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR------KGLEKVFKEYKIDS 87 (699)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCH------HHHHHHHHHSCCCE
T ss_pred EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCH------HHHHHHHHhCCCCE
Confidence 558999999999999999874221 1111100000 00135788999999998 78888777 8999
Q ss_pred EEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcC
Q psy13944 77 VFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153 (1217)
Q Consensus 77 ViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l 153 (1217)
|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+++||......+. .+ +
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~vyg~~~~~~~~---~~------------~ 151 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNM---IP------------I 151 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTC---CS------------B
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHHhCCCcccccc---CC------------c
Confidence 99999987532 345578999999999999999885 78999999999999864211000 00 0
Q ss_pred CcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccc--cchhHHHHHHHh
Q psy13944 154 SHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLTAMYVAVG 227 (1217)
Q Consensus 154 ~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~~li~~~~ 227 (1217)
+++. + ....+.|+.||+++|++++.++ .+++++|+||+.|||+......|-... .......+..+.
T Consensus 152 ~E~~-----~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~ 223 (699)
T 1z45_A 152 PEEC-----P---LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVA 223 (699)
T ss_dssp CTTS-----C---CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH
T ss_pred cccC-----C---CCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHH
Confidence 0000 0 0112689999999999998864 589999999999999864332221110 011223333333
Q ss_pred cC--ceeEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccc
Q psy13944 228 LG--IMRTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDV 299 (1217)
Q Consensus 228 ~G--~l~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~ 299 (1217)
.+ ....+++ +++..+|+|||||+|++++.++..... ... ....++
T Consensus 224 ~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~----~~~-----------------------~~~~~~ 276 (699)
T 1z45_A 224 VGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEA----YNE-----------------------NEGLCR 276 (699)
T ss_dssp TTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHH----SCT-----------------------TCCEEE
T ss_pred hcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhc----ccc-----------------------ccCCce
Confidence 33 2223344 678899999999999999988875321 000 001256
Q ss_pred eeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 300 NYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 300 ~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
.||++++ +++..|+++.+++.+|.+
T Consensus 277 ~yni~~~~~~s~~el~~~i~~~~g~~ 302 (699)
T 1z45_A 277 EWNLGSGKGSTVFEVYHAFCKASGID 302 (699)
T ss_dssp EEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCcHHHHHHHHHHHhCCC
Confidence 8999988 899999999999998865
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.4e-18 Score=203.10 Aligned_cols=159 Identities=24% Similarity=0.254 Sum_probs=111.3
Q ss_pred cccccccccccccc---ccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCcccc
Q psy13944 512 SLSKYAIHVPDLTK---SRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVK 588 (1217)
Q Consensus 512 GirvYlLkr~~stl---eRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~ 588 (1217)
|.+++++.|+.+.. +++++.+.....+.+.........+++++.||++++++||+.++++.+++++|+|||+||.++
T Consensus 100 g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~ 179 (478)
T 4dqv_A 100 DGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVN 179 (478)
T ss_dssp TCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCS
T ss_pred CCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccC
Confidence 67899998876533 233333322111111110111236899999999999999999999999999999999999988
Q ss_pred chhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhh
Q psy13944 589 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLND 666 (1217)
Q Consensus 589 f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~ 666 (1217)
+ .++...+++|+.||.+|+++|++. ++++|||+||+++++... ++.|+....|.+ .+.
T Consensus 180 ~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~------------------~~~ 239 (478)
T 4dqv_A 180 A-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAIEPSAFTEDADIRVIS------------------PTR 239 (478)
T ss_dssp B-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC------------------CEE
T ss_pred C-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhhcCccCCCCcCCcccccccC------------------ccc
Confidence 7 666678899999999999999986 789999999999987633 344442111100 001
Q ss_pred hccCCCCChhHHHHHHHHHHhhhh
Q psy13944 667 ILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 667 ~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.....++|.|+.||+++|.+++.+
T Consensus 240 ~~~~~~~~~Y~~sK~~~E~~~~~~ 263 (478)
T 4dqv_A 240 TVDGGWAGGYGTSKWAGEVLLREA 263 (478)
T ss_dssp ECCTTSEECHHHHHHHHHHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHHHH
Confidence 123456688999999988888554
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-17 Score=187.50 Aligned_cols=221 Identities=14% Similarity=0.091 Sum_probs=167.8
Q ss_pred CcccCCCCCCcccHHHHHHHH-hcChh--HHH-------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDF-FADDA--FDR-------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~-l~~~v--fd~-------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+. ....+ +++ +++..+ ..++.++.||++++ +++..+++++|+|
T Consensus 24 vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~------~~l~~~~~~~D~V 95 (344)
T 2gn4_A 24 ILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDL------ERLNYALEGVDIC 95 (344)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCH------HHHHHHTTTCSEE
T ss_pred EEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCH------HHHHHHHhcCCEE
Confidence 458999999999999999886 32122 211 111111 25899999999998 8899999999999
Q ss_pred EEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 78 FHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 78 iH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
||+||.... ...+...+++|+.||.+++++|.+. ++++||++||..++. |
T Consensus 96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~------------p-------------- 148 (344)
T 2gn4_A 96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAAN------------P-------------- 148 (344)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSS------------C--------------
T ss_pred EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCC------------C--------------
Confidence 999998652 2345679999999999999999985 789999999964321 0
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcC
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLG 229 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G 229 (1217)
.+.|+.||+++|+++..+. .+++++++||++|||+.... ...++..+..|
T Consensus 149 ---------------~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~----------i~~~~~~~~~g 203 (344)
T 2gn4_A 149 ---------------INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV----------VPFFKKLVQNK 203 (344)
T ss_dssp ---------------CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH----------HHHHHHHHHHT
T ss_pred ---------------ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH----------HHHHHHHHHcC
Confidence 1579999999999998876 57999999999999985321 12344455566
Q ss_pred c-eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCcc
Q psy13944 230 I-MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNY 308 (1217)
Q Consensus 230 ~-l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~ 308 (1217)
. ...+ .+++..+++++++|+|++++.++..... ++.|+++++++
T Consensus 204 ~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l~~~~~----------------------------------g~~~~~~~~~~ 248 (344)
T 2gn4_A 204 ASEIPI-TDIRMTRFWITLDEGVSFVLKSLKRMHG----------------------------------GEIFVPKIPSM 248 (344)
T ss_dssp CCCEEE-SCTTCEEEEECHHHHHHHHHHHHHHCCS----------------------------------SCEEEECCCEE
T ss_pred CCceEE-eCCCeEEeeEEHHHHHHHHHHHHhhccC----------------------------------CCEEecCCCcE
Confidence 5 3333 3678899999999999999988765322 56788877788
Q ss_pred CchHHHHHHHHhhch
Q psy13944 309 DTTNHVNYIKQNIKE 323 (1217)
Q Consensus 309 s~~el~~~ia~~~g~ 323 (1217)
++.|+++.+++..+.
T Consensus 249 s~~el~~~i~~~~~~ 263 (344)
T 2gn4_A 249 KMTDLAKALAPNTPT 263 (344)
T ss_dssp EHHHHHHHHCTTCCE
T ss_pred EHHHHHHHHHHhCCe
Confidence 889999998865543
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-17 Score=178.16 Aligned_cols=215 Identities=12% Similarity=-0.072 Sum_probs=151.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
.-+||+.+.-|..+.++|.+.-.. .+.++-....+....++.++.+|++++ +++..+++++|+|||+|+....
T Consensus 7 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~~ 80 (227)
T 3dhn_A 7 IVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSL------DEVCEVCKGADAVISAFNPGWN 80 (227)
T ss_dssp EEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCH------HHHHHHHTTCSEEEECCCC---
T ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCH------HHHHHHhcCCCEEEEeCcCCCC
Confidence 457899999999999999874321 222322222223347899999999998 8999999999999999987521
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc-ccccccCCCCChHHHHHHhhcCCccccccccccc
Q psy13944 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK-IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDIL 165 (1217)
Q Consensus 87 ~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~-I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~ 165 (1217)
....+++|+.|+.+++++|++. ++++|||+||+.+++.... ..|+...
T Consensus 81 ---~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~--------------------------- 129 (227)
T 3dhn_A 81 ---NPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGLRLMDSGE--------------------------- 129 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTEEGGGTTC---------------------------
T ss_pred ---ChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCCccccCCc---------------------------
Confidence 1237788999999999999985 7899999999887654321 1111000
Q ss_pred CCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceec
Q psy13944 166 IKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVD 243 (1217)
Q Consensus 166 ~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D 243 (1217)
...+.|+.+|+.+|.+++.+. .+++++++||+.|||+...+ +. +. ..+......+ +. ++
T Consensus 130 --~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~---~~---------~~~~~~~~~~--~~-~~ 190 (227)
T 3dhn_A 130 --VPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT--GR---YR---------LGKDDMIVDI--VG-NS 190 (227)
T ss_dssp --SCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCC--CC---CE---------EESSBCCCCT--TS-CC
T ss_pred --chHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccc--cc---ee---------ecCCCcccCC--CC-Cc
Confidence 011569999999999888876 78999999999999986532 11 10 0111111122 22 89
Q ss_pred cccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchh
Q psy13944 244 MVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVE 290 (1217)
Q Consensus 244 ~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~ 290 (1217)
+|+++|+|++++.++.++.. .+++||+.+|.+.+|
T Consensus 191 ~i~~~Dva~ai~~~l~~~~~------------~g~~~~~~~~~~~~~ 225 (227)
T 3dhn_A 191 HISVEDYAAAMIDELEHPKH------------HQERFTIGYLEHHHH 225 (227)
T ss_dssp EEEHHHHHHHHHHHHHSCCC------------CSEEEEEECCSCCC-
T ss_pred EEeHHHHHHHHHHHHhCccc------------cCcEEEEEeehhccc
Confidence 99999999999999987665 467888888887765
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.70 E-value=6.3e-18 Score=192.42 Aligned_cols=247 Identities=16% Similarity=0.143 Sum_probs=157.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC----------cccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN----------ANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~----------p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiV 77 (1217)
.-+||+.+.-|..+.++|.+... .+.-..|... .....+++++.||++++ +++..+++++|+|
T Consensus 12 vlVTGatGfIG~~l~~~Ll~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~D~V 84 (338)
T 2rh8_A 12 ACVVGGTGFVASLLVKLLLQKGY-AVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDE------LSFEAPIAGCDFV 84 (338)
T ss_dssp EEEECTTSHHHHHHHHHHHHTTC-EEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTS------SSSHHHHTTCSEE
T ss_pred EEEECCchHHHHHHHHHHHHCCC-EEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCCh------HHHHHHHcCCCEE
Confidence 55899999999999999987422 1111011100 00124789999999998 6777788899999
Q ss_pred EEcCccCCcc--cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccc-cccc-----ccccccccCCCCChHHHHHH
Q psy13944 78 FHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS-NCNI-----KKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 78 iH~AA~v~f~--e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v-~g~~-----~~I~E~~y~~p~dp~~~~~~ 149 (1217)
||+||...+. ++.+..+++|+.||.+++++|++..++++|||+||+.+ ++.. ..++|+.+..+
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~--------- 155 (338)
T 2rh8_A 85 FHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDI--------- 155 (338)
T ss_dssp EEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC---------
T ss_pred EEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccch---------
Confidence 9999987543 22334889999999999999998545899999999863 3321 12344321110
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
+... + .....+.|+.||+++|++++++. .+++++++||+.|||+...+. .......+....
T Consensus 156 ------~~~~---~--~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~~~~~~~ 218 (338)
T 2rh8_A 156 ------EFLT---S--AKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSD------VPSSIGLAMSLI 218 (338)
T ss_dssp ------------------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSS------CCHHHHHHHHHH
T ss_pred ------hhcc---c--cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHHH
Confidence 0000 0 00001259999999999998875 589999999999999976431 111111111112
Q ss_pred cCceeEEeeC------CCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcccee
Q psy13944 228 LGIMRTVYQN------TSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNY 301 (1217)
Q Consensus 228 ~G~l~~i~g~------~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Y 301 (1217)
.|... ..+. +....|++||+|+|++++.++..... +..|
T Consensus 219 ~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~----------------------------------~~~~ 263 (338)
T 2rh8_A 219 TGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESA----------------------------------SGRY 263 (338)
T ss_dssp HTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTC----------------------------------CEEE
T ss_pred cCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCCc----------------------------------CCcE
Confidence 22111 0110 11234899999999999988754222 2358
Q ss_pred eccCCccCchHHHHHHHHhhc
Q psy13944 302 EINHGNYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 302 nI~sg~~s~~el~~~ia~~~g 322 (1217)
+++++.++..|+++.+.+..+
T Consensus 264 ~~~~~~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 264 ICCAANTSVPELAKFLSKRYP 284 (338)
T ss_dssp EECSEEECHHHHHHHHHHHCT
T ss_pred EEecCCCCHHHHHHHHHHhCC
Confidence 877668899999999987653
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.3e-17 Score=185.65 Aligned_cols=245 Identities=14% Similarity=0.107 Sum_probs=158.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhh-----------cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRK-----------ENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~-----------~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDi 76 (1217)
.-+||+.+.-|..+.++|.+... .+.-..|. ..+....+++++.||++++ +++..+++++|+
T Consensus 8 vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~ 80 (337)
T 2c29_D 8 VCVTGASGFIGSWLVMRLLERGY-TVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADE------GSFDEAIKGCTG 80 (337)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTC-EEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTST------TTTHHHHTTCSE
T ss_pred EEEECCchHHHHHHHHHHHHCCC-EEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCH------HHHHHHHcCCCE
Confidence 45899999999999999987422 22100110 0011113588999999998 677788899999
Q ss_pred EEEcCccCCcc-cC-HHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccc-ccccc---cccccccCCCCChHHHHHHh
Q psy13944 77 VFHVAATVKFD-EH-FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS-NCNIK---KIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 77 ViH~AA~v~f~-e~-l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v-~g~~~---~I~E~~y~~p~dp~~~~~~~ 150 (1217)
|||+||...+. .. ....+++|+.||.+++++|++...+++|||+||+.+ ++... .++|+.+.+ .. .
T Consensus 81 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~---~~-~---- 152 (337)
T 2c29_D 81 VFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSD---ME-F---- 152 (337)
T ss_dssp EEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCC---HH-H----
T ss_pred EEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCc---hh-h----
Confidence 99999986543 22 346889999999999999998644899999999874 43321 134432111 00 0
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhc
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL 228 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~ 228 (1217)
.... ....+.|+.||+++|++++++. .+++++++||++|||+...+. +............
T Consensus 153 -------~~~~-----~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~~~~~~~~ 214 (337)
T 2c29_D 153 -------CRAK-----KMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS------MPPSLITALSPIT 214 (337)
T ss_dssp -------HHHH-----CCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS------CCHHHHHHTHHHH
T ss_pred -------hccc-----CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHHHc
Confidence 0000 0012369999999999998875 589999999999999975431 1110111111122
Q ss_pred CceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCcc
Q psy13944 229 GIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNY 308 (1217)
Q Consensus 229 G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~ 308 (1217)
|... ..+... ...++||+|+|++++.++..... +..|+++++.+
T Consensus 215 g~~~-~~~~~~-~~~~i~v~Dva~a~~~~~~~~~~----------------------------------~~~~~~~~~~~ 258 (337)
T 2c29_D 215 GNEA-HYSIIR-QGQFVHLDDLCNAHIYLFENPKA----------------------------------EGRYICSSHDC 258 (337)
T ss_dssp TCGG-GHHHHT-EEEEEEHHHHHHHHHHHHHCTTC----------------------------------CEEEEECCEEE
T ss_pred CCCc-cccccC-CCCEEEHHHHHHHHHHHhcCccc----------------------------------CceEEEeCCCC
Confidence 2111 111111 23499999999999988754322 23576666688
Q ss_pred CchHHHHHHHHhh
Q psy13944 309 DTTNHVNYIKQNI 321 (1217)
Q Consensus 309 s~~el~~~ia~~~ 321 (1217)
+..|+++.+++.+
T Consensus 259 s~~e~~~~i~~~~ 271 (337)
T 2c29_D 259 IILDLAKMLREKY 271 (337)
T ss_dssp EHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHC
Confidence 9999999998765
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.7e-17 Score=181.31 Aligned_cols=242 Identities=16% Similarity=0.123 Sum_probs=156.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhh-hc-----------CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLR-KE-----------NANFTERIVVLTADLQSDGLGLDEKEKKVLREDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr-~~-----------~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VD 75 (1217)
.-+||+.+.-|..+.++|.+... .+.-..| .. .+....++.++.||++++ ++++.+++++|
T Consensus 4 vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d 76 (322)
T 2p4h_X 4 VCVTGGTGFLGSWIIKSLLENGY-SVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNP------DSFAAAIEGCV 76 (322)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTC-EEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCG------GGGHHHHTTCS
T ss_pred EEEECChhHHHHHHHHHHHHCCC-EEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCH------HHHHHHHcCCC
Confidence 44799999999999999987422 2211111 00 000112578899999998 78888889999
Q ss_pred EEEEcCccCCccc--CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccc-cccc---cccccccCCCCChHHHHHH
Q psy13944 76 IVFHVAATVKFDE--HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN-CNIK---KIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 76 iViH~AA~v~f~e--~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~-g~~~---~I~E~~y~~p~dp~~~~~~ 149 (1217)
+|||+|+.+.+.. +.+.++++|+.||.+++++|++..++++|||+||++++ +... .++|..+.. .
T Consensus 77 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~---~------ 147 (322)
T 2p4h_X 77 GIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSD---V------ 147 (322)
T ss_dssp EEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCC---H------
T ss_pred EEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccc---h------
Confidence 9999998764432 23458999999999999999885468999999998754 3211 123321110 0
Q ss_pred hhcCCcccccccccccCCCCC-C-hHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMP-N-TYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~P-N-tYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
+..... .| + .|+.||+++|+++.++. .+++++++||+.|||+...+. .......+..
T Consensus 148 ------~~~~~~-------~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~------~~~~~~~~~~ 208 (322)
T 2p4h_X 148 ------DLLRSV-------KPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPK------LPDSIEKALV 208 (322)
T ss_dssp ------HHHHHH-------CCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSS------CCHHHHHHTH
T ss_pred ------hhhccc-------CcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCC------CCchHHHHHH
Confidence 000000 12 2 59999999999998876 689999999999999975431 1111111112
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccC
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINH 305 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~s 305 (1217)
...|....+. . ...++++|+|+|++++.++..... .| .|++++
T Consensus 209 ~~~g~~~~~~-~--~~~~~i~v~Dva~a~~~~~~~~~~---------------------------------~g-~~~~~~ 251 (322)
T 2p4h_X 209 LVLGKKEQIG-V--TRFHMVHVDDVARAHIYLLENSVP---------------------------------GG-RYNCSP 251 (322)
T ss_dssp HHHSCGGGCC-E--EEEEEEEHHHHHHHHHHHHHSCCC---------------------------------CE-EEECCC
T ss_pred HHhCCCccCc-C--CCcCEEEHHHHHHHHHHHhhCcCC---------------------------------CC-CEEEcC
Confidence 2233221121 1 234899999999999988754222 13 388444
Q ss_pred CccCchHHHHHHHHhh
Q psy13944 306 GNYDTTNHVNYIKQNI 321 (1217)
Q Consensus 306 g~~s~~el~~~ia~~~ 321 (1217)
++++..|+++.+.+..
T Consensus 252 ~~~s~~e~~~~i~~~~ 267 (322)
T 2p4h_X 252 FIVPIEEMSQLLSAKY 267 (322)
T ss_dssp EEEEHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHhC
Confidence 4899999999998654
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.64 E-value=6.5e-16 Score=171.51 Aligned_cols=212 Identities=12% Similarity=0.133 Sum_probs=155.6
Q ss_pred cccCCCCCCcccHHHHHHHHh-cChhHHHhhhcCc--c-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFF-ADDAFDRLRKENA--N-FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l-~~~vfd~Lr~~~p--~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
-+||+.+.-|..+.++|.+.. ...+.-..|.... . ...+++++.||++++ +++..+++++|+|||+||..
T Consensus 4 lVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~ 77 (287)
T 2jl1_A 4 AVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQP------ESLQKAFAGVSKLLFISGPH 77 (287)
T ss_dssp EETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCH------HHHHHHTTTCSEEEECCCCC
T ss_pred EEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCH------HHHHHHHhcCCEEEEcCCCC
Confidence 468888888888888887640 1112111111100 0 124688999999998 89999999999999999963
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
.. . ++|+.|+.+++++|++ .++++|||+||.+++. .
T Consensus 78 -~~---~---~~n~~~~~~l~~a~~~-~~~~~~v~~Ss~~~~~-----------~------------------------- 113 (287)
T 2jl1_A 78 -YD---N---TLLIVQHANVVKAARD-AGVKHIAYTGYAFAEE-----------S------------------------- 113 (287)
T ss_dssp -SC---H---HHHHHHHHHHHHHHHH-TTCSEEEEEEETTGGG-----------C-------------------------
T ss_pred -cC---c---hHHHHHHHHHHHHHHH-cCCCEEEEECCCCCCC-----------C-------------------------
Confidence 21 1 6799999999999998 4789999999987631 0
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc
Q psy13944 165 LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 165 ~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~ 244 (1217)
|..|+.+|+.+|+++++ .+++++++||+.++|+.. +.+. . .....|.. ..+.++..+++
T Consensus 114 -----~~~y~~~K~~~E~~~~~--~~~~~~ilrp~~~~~~~~---~~~~------~---~~~~~~~~--~~~~~~~~~~~ 172 (287)
T 2jl1_A 114 -----IIPLAHVHLATEYAIRT--TNIPYTFLRNALYTDFFV---NEGL------R---ASTESGAI--VTNAGSGIVNS 172 (287)
T ss_dssp -----CSTHHHHHHHHHHHHHH--TTCCEEEEEECCBHHHHS---SGGG------H---HHHHHTEE--EESCTTCCBCC
T ss_pred -----CCchHHHHHHHHHHHHH--cCCCeEEEECCEeccccc---hhhH------H---HHhhCCce--eccCCCCccCc
Confidence 13599999999999976 589999999998887531 1111 1 11223433 24456788999
Q ss_pred ccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhch
Q psy13944 245 VPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~ 323 (1217)
++++|+|++++.++..+.. .++.||++++ +++..|+++.+++.+|.
T Consensus 173 i~~~Dva~~~~~~~~~~~~---------------------------------~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 219 (287)
T 2jl1_A 173 VTRNELALAAATVLTEEGH---------------------------------ENKTYNLVSNQPWTFDELAQILSEVSGK 219 (287)
T ss_dssp BCHHHHHHHHHHHHTSSSC---------------------------------TTEEEEECCSSCBCHHHHHHHHHHHHSS
T ss_pred cCHHHHHHHHHHHhcCCCC---------------------------------CCcEEEecCCCcCCHHHHHHHHHHHHCC
Confidence 9999999999988764322 2678999998 89999999999999987
Q ss_pred h
Q psy13944 324 K 324 (1217)
Q Consensus 324 ~ 324 (1217)
+
T Consensus 220 ~ 220 (287)
T 2jl1_A 220 K 220 (287)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.64 E-value=8.3e-16 Score=169.18 Aligned_cols=219 Identities=13% Similarity=0.082 Sum_probs=159.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiViH~AA~v~f 86 (1217)
-+||+.+.-|..+.++|.+ ...+.-..|..... ++ +.+|++++ +++..++++ +|+|||+||....
T Consensus 4 lVtGatG~iG~~l~~~L~~--g~~V~~~~r~~~~~--~~---~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~ 70 (273)
T 2ggs_A 4 LITGASGQLGIELSRLLSE--RHEVIKVYNSSEIQ--GG---YKLDLTDF------PRLEDFIIKKRPDVIINAAAMTDV 70 (273)
T ss_dssp EEETTTSHHHHHHHHHHTT--TSCEEEEESSSCCT--TC---EECCTTSH------HHHHHHHHHHCCSEEEECCCCCCH
T ss_pred EEECCCChhHHHHHHHHhc--CCeEEEecCCCcCC--CC---ceeccCCH------HHHHHHHHhcCCCEEEECCcccCh
Confidence 4688888889999998875 23332212221111 22 78999987 788887775 9999999998764
Q ss_pred c---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc-ccccccCCCCChHHHHHHhhcCCcccccccc
Q psy13944 87 D---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK-IEEKFYEPLYTHIEMEQIINSCSHTELTVLN 162 (1217)
Q Consensus 87 ~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~-I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~t 162 (1217)
. +.+...+++|+.|+.+++++|++. +. +|||+||.++|+.... +.|+..+
T Consensus 71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~~~~~~~~e~~~~------------------------ 124 (273)
T 2ggs_A 71 DKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFDGEKGNYKEEDIP------------------------ 124 (273)
T ss_dssp HHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSCSSSCSBCTTSCC------------------------
T ss_pred hhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEcCCCCCcCCCCCC------------------------
Confidence 3 467789999999999999999985 44 8999999999875431 2332111
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee
Q psy13944 163 DILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV 242 (1217)
Q Consensus 163 p~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~ 242 (1217)
...+.|+.||+.+|++++. ++.+++||+.|||+ .+ + ...++..+..|....+.++ ..
T Consensus 125 -----~~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~G~--~~-------~--~~~~~~~~~~~~~~~~~~~---~~ 181 (273)
T 2ggs_A 125 -----NPINYYGLSKLLGETFALQ----DDSLIIRTSGIFRN--KG-------F--PIYVYKTLKEGKTVFAFKG---YY 181 (273)
T ss_dssp -----CCSSHHHHHHHHHHHHHCC----TTCEEEEECCCBSS--SS-------H--HHHHHHHHHTTCCEEEESC---EE
T ss_pred -----CCCCHHHHHHHHHHHHHhC----CCeEEEeccccccc--cH-------H--HHHHHHHHHcCCCEEeecC---CC
Confidence 1126799999999999976 78899999999982 11 1 1233344455654444443 88
Q ss_pred ccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHHHhhc
Q psy13944 243 DMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 243 D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia~~~g 322 (1217)
++++++|+|++++.++.... ++.||+++..++..|+++.+++.+|
T Consensus 182 ~~~~~~dva~~i~~~~~~~~-----------------------------------~g~~~i~~~~~s~~e~~~~~~~~~g 226 (273)
T 2ggs_A 182 SPISARKLASAILELLELRK-----------------------------------TGIIHVAGERISRFELALKIKEKFN 226 (273)
T ss_dssp CCCBHHHHHHHHHHHHHHTC-----------------------------------CEEEECCCCCEEHHHHHHHHHHHTT
T ss_pred CceEHHHHHHHHHHHHhcCc-----------------------------------CCeEEECCCcccHHHHHHHHHHHhC
Confidence 99999999999998876422 2378888777899999999999998
Q ss_pred hh
Q psy13944 323 EK 324 (1217)
Q Consensus 323 ~~ 324 (1217)
.+
T Consensus 227 ~~ 228 (273)
T 2ggs_A 227 LP 228 (273)
T ss_dssp CC
T ss_pred CC
Confidence 75
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.9e-16 Score=189.36 Aligned_cols=228 Identities=11% Similarity=0.056 Sum_probs=157.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF- 86 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f- 86 (1217)
.-+||+.+.-|..+.++|.+... .+....|... +...+.+|+.+. +..+++++|+|||+||....
T Consensus 150 VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~~-----~~~~v~~d~~~~--------~~~~l~~~D~Vih~A~~~~~~ 215 (516)
T 3oh8_A 150 VAITGSRGLVGRALTAQLQTGGH-EVIQLVRKEP-----KPGKRFWDPLNP--------ASDLLDGADVLVHLAGEPIFG 215 (516)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTC-EEEEEESSSC-----CTTCEECCTTSC--------CTTTTTTCSEEEECCCC----
T ss_pred EEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCC-----Cccceeecccch--------hHHhcCCCCEEEECCCCcccc
Confidence 45899999999999999987422 2322222211 112367888754 23456899999999998632
Q ss_pred ---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccc-ccc--cccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 87 ---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNC-NIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 87 ---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g-~~~--~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
......++++|+.||.+|+++|.+..++++|||+||+++|| ... .++|....
T Consensus 216 ~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~---------------------- 273 (516)
T 3oh8_A 216 RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES---------------------- 273 (516)
T ss_dssp -CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC----------------------
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC----------------------
Confidence 23456789999999999999944446889999999999998 322 13332211
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCC
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTS 239 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~ 239 (1217)
..+.|+.+|..+|.++.... .+++++|+||+.|||+.. |. ...++..+..|.. ...++++
T Consensus 274 --------~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~----~~------~~~~~~~~~~g~~-~~~g~g~ 334 (516)
T 3oh8_A 274 --------GDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG----GM------LPLLKTLFSTGLG-GKFGDGT 334 (516)
T ss_dssp --------CSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB----SH------HHHHHHTTC---C-CCCTTSC
T ss_pred --------CcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC----Ch------HHHHHHHHHhCCC-cccCCCC
Confidence 12579999999999877655 799999999999999853 11 1122222233322 3567889
Q ss_pred ceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHH
Q psy13944 240 NIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIK 318 (1217)
Q Consensus 240 ~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia 318 (1217)
+.+++|||||+|++++.++.+... +..||++++ +++..|+++.++
T Consensus 335 ~~~~~i~v~Dva~ai~~~l~~~~~----------------------------------~g~~ni~~~~~~s~~el~~~i~ 380 (516)
T 3oh8_A 335 SWFSWIAIDDLTDIYYRAIVDAQI----------------------------------SGPINAVAPNPVSNADMTKILA 380 (516)
T ss_dssp CEECEEEHHHHHHHHHHHHHCTTC----------------------------------CEEEEESCSCCEEHHHHHHHTT
T ss_pred ceEceEeHHHHHHHHHHHHhCccc----------------------------------CCcEEEECCCCCCHHHHHHHHH
Confidence 999999999999999998875443 346888888 889999999999
Q ss_pred Hhhchh
Q psy13944 319 QNIKEK 324 (1217)
Q Consensus 319 ~~~g~~ 324 (1217)
+.+|.+
T Consensus 381 ~~~g~~ 386 (516)
T 3oh8_A 381 TSMHRP 386 (516)
T ss_dssp C-----
T ss_pred HHhCCC
Confidence 888865
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.5e-16 Score=167.57 Aligned_cols=203 Identities=13% Similarity=0.122 Sum_probs=149.6
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcC-cccCCCeEEEEccCCC-CCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN-ANFTERIVVLTADLQS-DGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~-p~~~~kI~~V~GDl~d-~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
-+||+.+.-|..+.++|.+.. ..+.-..|... .....+++++.+|+++ + +++..+++++|+|||+||...-
T Consensus 4 lItGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~------~~~~~~~~~~d~vi~~ag~~~~ 76 (219)
T 3dqp_A 4 FIVGSTGRVGKSLLKSLSTTD-YQIYAGARKVEQVPQYNNVKAVHFDVDWTP------EEMAKQLHGMDAIINVSGSGGK 76 (219)
T ss_dssp EEESTTSHHHHHHHHHHTTSS-CEEEEEESSGGGSCCCTTEEEEECCTTSCH------HHHHTTTTTCSEEEECCCCTTS
T ss_pred EEECCCCHHHHHHHHHHHHCC-CEEEEEECCccchhhcCCceEEEecccCCH------HHHHHHHcCCCEEEECCcCCCC
Confidence 468888888988888887642 22222122211 1122789999999999 6 8999999999999999998652
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccC
Q psy13944 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILI 166 (1217)
Q Consensus 87 ~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~ 166 (1217)
..+++|+.|+.+++++|++. ++++|||+||.++++... ..| . + .
T Consensus 77 -----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~-~~e-~------~--------------~-------- 120 (219)
T 3dqp_A 77 -----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPEK-WIG-A------G--------------F-------- 120 (219)
T ss_dssp -----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGGG-CCS-H------H--------------H--------
T ss_pred -----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCCc-ccc-c------c--------------c--------
Confidence 25678999999999999984 789999999988765321 111 0 0 0
Q ss_pred CCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecccc
Q psy13944 167 KPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVP 246 (1217)
Q Consensus 167 ~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~Vp 246 (1217)
...+.|+.+|+.+|++++ ...+++++++||+.++|+.... . .. . ++...++++
T Consensus 121 -~~~~~Y~~sK~~~e~~~~-~~~~i~~~ilrp~~v~g~~~~~---~------------------~~--~--~~~~~~~i~ 173 (219)
T 3dqp_A 121 -DALKDYYIAKHFADLYLT-KETNLDYTIIQPGALTEEEATG---L------------------ID--I--NDEVSASNT 173 (219)
T ss_dssp -HHTHHHHHHHHHHHHHHH-HSCCCEEEEEEECSEECSCCCS---E------------------EE--E--SSSCCCCEE
T ss_pred -ccccHHHHHHHHHHHHHH-hccCCcEEEEeCceEecCCCCC---c------------------cc--c--CCCcCCccc
Confidence 002579999999999996 3478999999999999974321 1 10 1 267789999
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHH
Q psy13944 247 GDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHV 314 (1217)
Q Consensus 247 VDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~ 314 (1217)
++|+|++++.++.++.. .++.|+++++..++.|++
T Consensus 174 ~~Dva~~i~~~l~~~~~---------------------------------~g~~~~i~~g~~~~~e~~ 208 (219)
T 3dqp_A 174 IGDVADTIKELVMTDHS---------------------------------IGKVISMHNGKTAIKEAL 208 (219)
T ss_dssp HHHHHHHHHHHHTCGGG---------------------------------TTEEEEEEECSEEHHHHH
T ss_pred HHHHHHHHHHHHhCccc---------------------------------cCcEEEeCCCCccHHHHH
Confidence 99999999998876443 267889988877777775
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1e-15 Score=169.57 Aligned_cols=207 Identities=12% Similarity=0.003 Sum_probs=152.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFD 87 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~ 87 (1217)
.-+||+.+.-|..+.++|.+.... +.-.-|........+++++.+|++++ +++..+++++|+|||+||.. ..
T Consensus 6 vlVTGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~D~vi~~Ag~~-~~ 77 (267)
T 3rft_A 6 LLVTGAAGQLGRVMRERLAPMAEI-LRLADLSPLDPAGPNEECVQCDLADA------NAVNAMVAGCDGIVHLGGIS-VE 77 (267)
T ss_dssp EEEESTTSHHHHHHHHHTGGGEEE-EEEEESSCCCCCCTTEEEEECCTTCH------HHHHHHHTTCSEEEECCSCC-SC
T ss_pred EEEECCCCHHHHHHHHHHHhcCCE-EEEEecCCccccCCCCEEEEcCCCCH------HHHHHHHcCCCEEEECCCCc-Cc
Confidence 347899999999998888764322 22111222222346899999999998 89999999999999999984 45
Q ss_pred cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 88 EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 88 e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
++++..+++|+.|+.+++++|++. +.++|||+||..+++... .++|+...
T Consensus 78 ~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~~~~~~e~~~~-------------------------- 130 (267)
T 3rft_A 78 KPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQTERLGPDVPA-------------------------- 130 (267)
T ss_dssp CCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBTTSCBCTTSCC--------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCCCCCCCCCCCC--------------------------
Confidence 678889999999999999999884 789999999999887432 13332211
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee
Q psy13944 165 LIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV 242 (1217)
Q Consensus 165 ~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~ 242 (1217)
...+.|+.||+.+|.+++.++ .+++++++||+.|+|+.. +++...
T Consensus 131 ---~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~------------------------------~~~~~~ 177 (267)
T 3rft_A 131 ---RPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPN------------------------------NYRMLS 177 (267)
T ss_dssp ---CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCC------------------------------STTHHH
T ss_pred ---CCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCC------------------------------CCCcee
Confidence 112679999999999998775 689999999999998621 234556
Q ss_pred ccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhh
Q psy13944 243 DMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESI 294 (1217)
Q Consensus 243 D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~ 294 (1217)
++++++|+++++..++..... ....+++..+.+.+|.+..
T Consensus 178 ~~~~~~d~a~~~~~~~~~~~~------------~~~~~~~~s~~~~~~~~~~ 217 (267)
T 3rft_A 178 TWFSHDDFVSLIEAVFRAPVL------------GCPVVWGASANDAGWWDNS 217 (267)
T ss_dssp HBCCHHHHHHHHHHHHHCSCC------------CSCEEEECCCCTTCCBCCG
T ss_pred eEEcHHHHHHHHHHHHhCCCC------------CceEEEEeCCCCCCcccCh
Confidence 789999999998887765433 2345666666655554443
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.1e-15 Score=167.69 Aligned_cols=225 Identities=11% Similarity=-0.022 Sum_probs=155.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC--C-
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV--K- 85 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v--~- 85 (1217)
-+||+.+.-|..+.++|.+... .+.-..|+ |.. . -+..| +.....++++|.|||+|+.. .
T Consensus 4 LVTGatGfIG~~L~~~L~~~G~-~V~~l~R~--~~~-~---~~~~~----------~~~~~~l~~~d~vihla~~~i~~~ 66 (298)
T 4b4o_A 4 LVGGGTGFIGTALTQLLNARGH-EVTLVSRK--PGP-G---RITWD----------ELAASGLPSCDAAVNLAGENILNP 66 (298)
T ss_dssp EEETTTSHHHHHHHHHHHHTTC-EEEEEESS--CCT-T---EEEHH----------HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred EEECCCCHHHHHHHHHHHHCCC-EEEEEECC--CCc-C---eeecc----------hhhHhhccCCCEEEEeccCcccch
Confidence 4789999999999999977432 22211121 110 0 11111 22234568999999999852 1
Q ss_pred ---ccc-CHHHHHHHHHHHHHHHHHHhHhcC-CCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 86 ---FDE-HFQTAFEINCKGTEKLLKMAEEMK-NLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 86 ---f~e-~l~~a~~vNV~GT~~LLelAk~~~-~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
+.. ..+...+.|+.||.+|+++|++.+ ..+.||++||+++||+... ++|+....+
T Consensus 67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~------------------ 128 (298)
T 4b4o_A 67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD------------------ 128 (298)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC------------------
T ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccc------------------
Confidence 122 234678899999999999998753 3456899999999997542 344322111
Q ss_pred cccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCC
Q psy13944 159 TVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNT 238 (1217)
Q Consensus 159 ~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~ 238 (1217)
.+.|+.+|...|........+++++++||+.|||+.. |+ ...++.....|.. ...+++
T Consensus 129 -----------~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~----~~------~~~~~~~~~~~~~-~~~g~g 186 (298)
T 4b4o_A 129 -----------FDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG----GA------MGHMLLPFRLGLG-GPIGSG 186 (298)
T ss_dssp -----------SSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTS----HH------HHHHHHHHHTTCC-CCBTTS
T ss_pred -----------cchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCC----Cc------hhHHHHHHhcCCc-ceeccc
Confidence 1457888888887654444789999999999999853 11 1233334444433 345889
Q ss_pred CceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHH
Q psy13944 239 SNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYI 317 (1217)
Q Consensus 239 ~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~i 317 (1217)
++.+++|||||+|++++.++.++.. .+.||++++ +++..|+++.+
T Consensus 187 ~~~~~~ihv~Dva~a~~~~~~~~~~----------------------------------~g~yn~~~~~~~t~~e~~~~i 232 (298)
T 4b4o_A 187 HQFFPWIHIGDLAGILTHALEANHV----------------------------------HGVLNGVAPSSATNAEFAQTF 232 (298)
T ss_dssp CSBCCEEEHHHHHHHHHHHHHCTTC----------------------------------CEEEEESCSCCCBHHHHHHHH
T ss_pred CceeecCcHHHHHHHHHHHHhCCCC----------------------------------CCeEEEECCCccCHHHHHHHH
Confidence 9999999999999999998876554 358999988 89999999999
Q ss_pred HHhhchh
Q psy13944 318 KQNIKEK 324 (1217)
Q Consensus 318 a~~~g~~ 324 (1217)
++.+|++
T Consensus 233 a~~lgrp 239 (298)
T 4b4o_A 233 GAALGRR 239 (298)
T ss_dssp HHHHTCC
T ss_pred HHHhCcC
Confidence 9999875
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=9.6e-15 Score=166.98 Aligned_cols=106 Identities=19% Similarity=0.201 Sum_probs=85.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.||++++ +++..+++++|+|||+||...... .....+++|+.||.+|+++|++. ++++|||+||
T Consensus 79 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS 151 (351)
T 3ruf_A 79 SRFCFIEGDIRDL------TTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAAS 151 (351)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEE
T ss_pred CceEEEEccCCCH------HHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEec
Confidence 5799999999984 478888899999999999765443 34468899999999999999997 7899999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++||... +++|.....| .+.|+.||+.+|.++..|
T Consensus 152 ~~vyg~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~ 189 (351)
T 3ruf_A 152 SSTYGDHPALPKVEENIGNP-----------------------------LSPYAVTKYVNEIYAQVY 189 (351)
T ss_dssp GGGGTTCCCSSBCTTCCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCccCCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 99998654 4555532221 256999999988888554
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.8e-15 Score=166.90 Aligned_cols=206 Identities=12% Similarity=0.053 Sum_probs=147.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCccc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFDE 88 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~e 88 (1217)
-+||+.+.-|..+.++|.+... .+.-.-|........++.++.+|++++ +++..+++++|+|||+||... .+
T Consensus 6 lVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~-~~ 77 (267)
T 3ay3_A 6 LVTGAAGGVGSAIRPHLGTLAH-EVRLSDIVDLGAAEAHEEIVACDLADA------QAVHDLVKDCDGIIHLGGVSV-ER 77 (267)
T ss_dssp EEESTTSHHHHHHGGGGGGTEE-EEEECCSSCCCCCCTTEEECCCCTTCH------HHHHHHHTTCSEEEECCSCCS-CC
T ss_pred EEECCCCHHHHHHHHHHHhCCC-EEEEEeCCCccccCCCccEEEccCCCH------HHHHHHHcCCCEEEECCcCCC-CC
Confidence 4688888888888888765321 222111221112235688999999987 889999999999999999763 45
Q ss_pred CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccc---cccccccCCCCChHHHHHHhhcCCccccccccccc
Q psy13944 89 HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDIL 165 (1217)
Q Consensus 89 ~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~---~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~ 165 (1217)
.+...+++|+.|+.+++++|++. ++++|||+||..+++... .++|....
T Consensus 78 ~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~~~~~~E~~~~--------------------------- 129 (267)
T 3ay3_A 78 PWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPRTTRIDTEVPR--------------------------- 129 (267)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBTTSCBCTTSCC---------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCCCCCCCCCCCC---------------------------
Confidence 67789999999999999999984 789999999999987532 12332111
Q ss_pred CCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceec
Q psy13944 166 IKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVD 243 (1217)
Q Consensus 166 ~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D 243 (1217)
...+.|+.||+.+|++++.+. .+++++++||+.+|+. |. +++...+
T Consensus 130 --~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~---~~---------------------------~~~~~~~ 177 (267)
T 3ay3_A 130 --RPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK---PK---------------------------DARMMAT 177 (267)
T ss_dssp --CCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSS---CC---------------------------SHHHHHH
T ss_pred --CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCC---CC---------------------------CCCeeec
Confidence 112679999999999998765 6899999999999842 21 1123468
Q ss_pred cccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhh
Q psy13944 244 MVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESI 294 (1217)
Q Consensus 244 ~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~ 294 (1217)
+++++|+|++++.++..... .+..+|+.++...++.+..
T Consensus 178 ~~~~~dva~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~d~~ 216 (267)
T 3ay3_A 178 WLSVDDFMRLMKRAFVAPKL------------GCTVVYGASANTESWWDND 216 (267)
T ss_dssp BCCHHHHHHHHHHHHHSSCC------------CEEEEEECCSCSSCCBCCG
T ss_pred cccHHHHHHHHHHHHhCCCC------------CceeEecCCCccccccCHH
Confidence 99999999999988765432 1345666666555544443
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.4e-14 Score=163.37 Aligned_cols=106 Identities=20% Similarity=0.264 Sum_probs=81.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.||++++ +.++.++++ +|+|||+||..... ......+++|+.||.+|+++|++. ++++|||+
T Consensus 75 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~ 147 (346)
T 4egb_A 75 PNYYFVKGEIQNG------ELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQV 147 (346)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEE
T ss_pred CCeEEEEcCCCCH------HHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 5799999999985 467777776 99999999987654 344478899999999999999997 78999999
Q ss_pred ccceeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+++||... +++|.....| .+.|+.||+.+|.++..|
T Consensus 148 SS~~vy~~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~ 188 (346)
T 4egb_A 148 STDEVYGSLGKTGRFTEETPLAP-----------------------------NSPYSSSKASADMIALAY 188 (346)
T ss_dssp EEGGGGCCCCSSCCBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred CchHHhCCCCcCCCcCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 9999998642 4555532221 246999999988888554
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.7e-15 Score=163.63 Aligned_cols=209 Identities=10% Similarity=0.065 Sum_probs=148.7
Q ss_pred cccCCCCCCcccHHHHHHHHh-cChhHHHhhhcCc--c-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFF-ADDAFDRLRKENA--N-FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l-~~~vfd~Lr~~~p--~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
-+||+.+.-|..+.++|.+.. ...+.-..|.... . ...++.++.+|++++ +++..+++++|+|||+|+..
T Consensus 3 lVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~ 76 (286)
T 2zcu_A 3 AITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDE------AALTSALQGVEKLLLISSSE 76 (286)
T ss_dssp EEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCH------HHHHHHTTTCSEEEECC---
T ss_pred EEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCH------HHHHHHHhCCCEEEEeCCCC
Confidence 368888888888888887640 1111111111100 0 124688999999998 88999999999999999952
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
. ..|+.++.+++++|++. ++++|||+||.+++. .
T Consensus 77 ~---------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~-----------~------------------------- 110 (286)
T 2zcu_A 77 V---------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT-----------S------------------------- 110 (286)
T ss_dssp --------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT-----------C-------------------------
T ss_pred c---------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC-----------C-------------------------
Confidence 1 25899999999999985 789999999987641 0
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc
Q psy13944 165 LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 165 ~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~ 244 (1217)
|..|+.+|..+|+++.+ .+++++++||+.++++.. ++ +......|... .++++..+++
T Consensus 111 -----~~~y~~sK~~~e~~~~~--~~~~~~ilrp~~~~~~~~----~~---------~~~~~~~~~~~--~~~~~~~~~~ 168 (286)
T 2zcu_A 111 -----PLGLADEHIETEKMLAD--SGIVYTLLRNGWYSENYL----AS---------APAALEHGVFI--GAAGDGKIAS 168 (286)
T ss_dssp -----CSTTHHHHHHHHHHHHH--HCSEEEEEEECCBHHHHH----TT---------HHHHHHHTEEE--ESCTTCCBCC
T ss_pred -----cchhHHHHHHHHHHHHH--cCCCeEEEeChHHhhhhH----HH---------hHHhhcCCcee--ccCCCCcccc
Confidence 13599999999999976 489999999987666421 01 11112234332 4567888999
Q ss_pred ccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhch
Q psy13944 245 VPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~ 323 (1217)
++++|+|++++.++..+.. .++.||++++ .++..|+++.+++.+|.
T Consensus 169 i~~~Dva~~~~~~~~~~~~---------------------------------~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 215 (286)
T 2zcu_A 169 ATRADYAAAAARVISEAGH---------------------------------EGKVYELAGDSAWTLTQLAAELTKQSGK 215 (286)
T ss_dssp BCHHHHHHHHHHHHHSSSC---------------------------------TTCEEEECCSSCBCHHHHHHHHHHHHSS
T ss_pred ccHHHHHHHHHHHhcCCCC---------------------------------CCceEEEeCCCcCCHHHHHHHHHHHHCC
Confidence 9999999999988765322 2678999988 89999999999999987
Q ss_pred h
Q psy13944 324 K 324 (1217)
Q Consensus 324 ~ 324 (1217)
+
T Consensus 216 ~ 216 (286)
T 2zcu_A 216 Q 216 (286)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.8e-14 Score=160.95 Aligned_cols=106 Identities=18% Similarity=0.175 Sum_probs=84.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhc-HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEH-FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~-~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+++++.+|++++ +++..+++++|+|||+||...+... ....+++|+.||.+++++|++. ++++|||+||++
T Consensus 56 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~ 128 (347)
T 4id9_A 56 TGGEEVVGSLEDG------QALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGE 128 (347)
T ss_dssp SCCSEEESCTTCH------HHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG
T ss_pred CCccEEecCcCCH------HHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHH
Confidence 4578899999985 4688888999999999998766443 3678999999999999999986 789999999999
Q ss_pred eecCc--c--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 628 SNCNI--K--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 628 v~g~~--~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+||.. . ++.|..... ..+.|+.||+++|.++..|
T Consensus 129 vyg~~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 129 VYPENRPEFLPVTEDHPLC-----------------------------PNSPYGLTKLLGEELVRFH 166 (347)
T ss_dssp GTTTTSCSSSSBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCcCCCCCCC-----------------------------CCChHHHHHHHHHHHHHHH
Confidence 99862 1 455553222 1356999999999888665
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=161.20 Aligned_cols=103 Identities=23% Similarity=0.111 Sum_probs=83.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
+++++.+|++ + +++..+++++|+|||+||..... .....+++|+.||.+++++|++. ++++|||+||+++|
T Consensus 43 ~~~~~~~Dl~-~------~~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vy 113 (311)
T 3m2p_A 43 DYEYRVSDYT-L------EDLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAY 113 (311)
T ss_dssp CCEEEECCCC-H------HHHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGC
T ss_pred ceEEEEcccc-H------HHHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHh
Confidence 5889999998 5 36888889999999999987765 45567889999999999999997 78999999999999
Q ss_pred cCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 630 CNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 630 g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|... +++|+....| .+.|+.||+.+|.++..|
T Consensus 114 g~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~ 147 (311)
T 3m2p_A 114 SDETSLPWNEKELPLP-----------------------------DLMYGVSKLACEHIGNIY 147 (311)
T ss_dssp CCGGGCSBCTTSCCCC-----------------------------SSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCC-----------------------------CchhHHHHHHHHHHHHHH
Confidence 8654 4555532222 246999999988888554
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.54 E-value=7.3e-15 Score=159.09 Aligned_cols=208 Identities=16% Similarity=0.150 Sum_probs=149.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--cc-cCCCe-EEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--AN-FTERI-VVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAAT 83 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--p~-~~~kI-~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~ 83 (1217)
.-+||+.+.-|..+.++|.+... .+.-..|... .. ...++ +++.+|++ . ++..+++++|+|||+||.
T Consensus 24 ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~-------~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 24 VLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-E-------DFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-S-------CCGGGGTTCSEEEECCCC
T ss_pred EEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-H-------HHHHHHcCCCEEEECCCC
Confidence 45899999999999999987422 2211111110 00 12368 99999998 2 345677899999999997
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccccc
Q psy13944 84 VKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLND 163 (1217)
Q Consensus 84 v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp 163 (1217)
... +.++..+++|+.|+.+++++|++. ++++||++||..+... |..+
T Consensus 95 ~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~-----~~~~-------------------------- 141 (236)
T 3e8x_A 95 GPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDP-----DQGP-------------------------- 141 (236)
T ss_dssp CTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCG-----GGSC--------------------------
T ss_pred CCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCC-----CCCh--------------------------
Confidence 653 567789999999999999999885 7899999999543221 1000
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceec
Q psy13944 164 ILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVD 243 (1217)
Q Consensus 164 ~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D 243 (1217)
...+.|+.||+.+|++++. .+++++++||+.++|+.... .. ....++....+
T Consensus 142 ----~~~~~Y~~sK~~~e~~~~~--~gi~~~~lrpg~v~~~~~~~---------------------~~-~~~~~~~~~~~ 193 (236)
T 3e8x_A 142 ----MNMRHYLVAKRLADDELKR--SSLDYTIVRPGPLSNEESTG---------------------KV-TVSPHFSEITR 193 (236)
T ss_dssp ----GGGHHHHHHHHHHHHHHHH--SSSEEEEEEECSEECSCCCS---------------------EE-EEESSCSCCCC
T ss_pred ----hhhhhHHHHHHHHHHHHHH--CCCCEEEEeCCcccCCCCCC---------------------eE-EeccCCCcccC
Confidence 0114699999999999984 68999999999999984321 11 12234455789
Q ss_pred cccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHH
Q psy13944 244 MVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIK 318 (1217)
Q Consensus 244 ~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia 318 (1217)
+++++|+|++++.++..... .++.|++++++.+..|+++.++
T Consensus 194 ~i~~~Dva~~~~~~~~~~~~---------------------------------~g~~~~v~~~~~~~~e~~~~i~ 235 (236)
T 3e8x_A 194 SITRHDVAKVIAELVDQQHT---------------------------------IGKTFEVLNGDTPIAKVVEQLG 235 (236)
T ss_dssp CEEHHHHHHHHHHHTTCGGG---------------------------------TTEEEEEEECSEEHHHHHHTC-
T ss_pred cEeHHHHHHHHHHHhcCccc---------------------------------cCCeEEEeCCCcCHHHHHHHhc
Confidence 99999999999988865433 2678888888888888876654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-14 Score=161.69 Aligned_cols=108 Identities=19% Similarity=0.142 Sum_probs=80.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCcccc----chhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVK----FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~----f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.++++.+|++++ +.+..++++ +|+|||+||.+. ..+.....+++|+.||.+|+++|++. ++++|||+
T Consensus 39 ~~~~~~~D~~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~ 111 (319)
T 4b8w_A 39 FVSSKDADLTDT------AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSC 111 (319)
T ss_dssp ECCTTTCCTTSH------HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred ccCceecccCCH------HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence 345567899874 467777766 999999999865 23455678999999999999999997 78999999
Q ss_pred ccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCC-C-hhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMP-N-TYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~p-N-tYt~SK~lAE~lv~~y 690 (1217)
||+++||... +++|+.... ....| + .|+.||+++|.++..|
T Consensus 112 SS~~vyg~~~~~~~~E~~~~~--------------------------~~~~p~~~~Y~~sK~~~E~~~~~~ 156 (319)
T 4b8w_A 112 LSTCIFPDKTTYPIDETMIHN--------------------------GPPHNSNFGYSYAKRMIDVQNRAY 156 (319)
T ss_dssp CCGGGSCSSCCSSBCGGGGGB--------------------------SCCCSSSHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCCCcccccccc--------------------------CCCCCCcchHHHHHHHHHHHHHHH
Confidence 9999998754 455553100 01112 2 5999999988888655
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-13 Score=159.78 Aligned_cols=112 Identities=13% Similarity=0.181 Sum_probs=83.8
Q ss_pred CcEEEEEcccC-CCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 549 ERIVVLTADLQ-SDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 549 ~kV~~V~GDlt-d~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
.+++++.||++ + .+.++.+++++|+|||+||..... ......+++|+.||.+|+++|++. + ++|||+|
T Consensus 69 ~~v~~~~~Dl~~d------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~S 140 (372)
T 3slg_A 69 ERMHFFEGDITIN------KEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPS 140 (372)
T ss_dssp TTEEEEECCTTTC------HHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEEC
T ss_pred CCeEEEeCccCCC------HHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeC
Confidence 47999999999 5 356777888999999999987643 345578899999999999999998 5 8999999
Q ss_pred cceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+++||... ++.|+..+.+.+| .....+.|+.||+++|.++..|
T Consensus 141 S~~vyg~~~~~~~~e~~~~~~~~p----------------------~~~p~~~Y~~sK~~~E~~~~~~ 186 (372)
T 3slg_A 141 TSEVYGMCADEQFDPDASALTYGP----------------------INKPRWIYACSKQLMDRVIWGY 186 (372)
T ss_dssp CGGGGBSCCCSSBCTTTCCEEECC----------------------TTCTTHHHHHHHHHHHHHHHHH
T ss_pred cHHHhCCCCCCCCCccccccccCC----------------------CCCCCCcHHHHHHHHHHHHHHH
Confidence 999998743 4445432211000 0111236999999998888655
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-14 Score=155.38 Aligned_cols=223 Identities=13% Similarity=0.068 Sum_probs=154.8
Q ss_pred CcccCCCCCCcccHHHHHHHHh-cChhHHHhhh--cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFF-ADDAFDRLRK--ENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l-~~~vfd~Lr~--~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
.-+||+.+.-|..+.++|.+.. ...+....|. .......++.++.+|++++ +++..+++++|+|||+||..
T Consensus 7 ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~ 80 (253)
T 1xq6_A 7 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDA------DSINPAFQGIDALVILTSAV 80 (253)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCC
T ss_pred EEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCH------HHHHHHHcCCCEEEEecccc
Confidence 4578999999999999998862 2222211111 1111235688999999998 89999999999999999975
Q ss_pred Ccc----------------cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHH
Q psy13944 85 KFD----------------EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 85 ~f~----------------e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
... +.....+++|+.|+.+++++|++. ++++|||+||..++... .|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~---------~~~~~----- 145 (253)
T 1xq6_A 81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPD---------HPLNK----- 145 (253)
T ss_dssp CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTT---------CGGGG-----
T ss_pred ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEEEEcCccCCCCC---------Ccccc-----
Confidence 321 111246789999999999999985 68899999998764211 00000
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhc
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL 228 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~ 228 (1217)
. ....|+.+|+.+|+++++ .+++++++||+.++|+..... ......
T Consensus 146 ------------~-------~~~~y~~sK~~~e~~~~~--~~i~~~~vrpg~v~~~~~~~~-~~~~~~------------ 191 (253)
T 1xq6_A 146 ------------L-------GNGNILVWKRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVR-ELLVGK------------ 191 (253)
T ss_dssp ------------G-------GGCCHHHHHHHHHHHHHT--SSSCEEEEEECEEECSCSSSS-CEEEES------------
T ss_pred ------------c-------cchhHHHHHHHHHHHHHh--CCCceEEEecceeecCCcchh-hhhccC------------
Confidence 0 003599999999999976 589999999999999864211 000000
Q ss_pred CceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC--
Q psy13944 229 GIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-- 306 (1217)
Q Consensus 229 G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-- 306 (1217)
...+.+ ...++++++|+|++++.++..+.. .++.||++++
T Consensus 192 --~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~~---------------------------------~g~~~~i~~~~~ 233 (253)
T 1xq6_A 192 --DDELLQ---TDTKTVPRADVAEVCIQALLFEEA---------------------------------KNKAFDLGSKPE 233 (253)
T ss_dssp --TTGGGG---SSCCEEEHHHHHHHHHHHTTCGGG---------------------------------TTEEEEEEECCT
T ss_pred --CcCCcC---CCCcEEcHHHHHHHHHHHHcCccc---------------------------------cCCEEEecCCCc
Confidence 000111 124689999999999988765332 2678999885
Q ss_pred --ccCchHHHHHHHHhhch
Q psy13944 307 --NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 307 --~~s~~el~~~ia~~~g~ 323 (1217)
+++..|+++.+++.+|+
T Consensus 234 ~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 234 GTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp TTSCCCCCHHHHHHTCCCC
T ss_pred CCCCCHHHHHHHHHHHhCC
Confidence 48999999999988774
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-13 Score=153.74 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.++.++.+|++++ ++++.+++ ++|+|||+||...... .....+++|+.||.+++++|++. ++++|||+
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~ 127 (341)
T 3enk_A 55 KTPAFHETDVSDE------RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFS 127 (341)
T ss_dssp CCCEEECCCTTCH------HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCceEEEeecCCH------HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence 4688999999985 46777776 8999999999876433 33478899999999999999987 68899999
Q ss_pred ccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+.+||... +++|.....| .+.|+.||+++|.+++.|
T Consensus 128 SS~~~~g~~~~~~~~e~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~ 167 (341)
T 3enk_A 128 SSATVYGVPERSPIDETFPLSA-----------------------------TNPYGQTKLMAEQILRDV 167 (341)
T ss_dssp EEGGGBCSCSSSSBCTTSCCBC-----------------------------SSHHHHHHHHHHHHHHHH
T ss_pred ecceEecCCCCCCCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 9999998643 4555532221 246999999999988665
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=3.9e-13 Score=154.15 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=81.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.+|++++ +++..++++ +|+|||+||.... .......+++|+.||.+|+++|++++++++|||+
T Consensus 57 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~ 130 (357)
T 1rkx_A 57 DGMQSEIGDIRDQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 130 (357)
T ss_dssp TTSEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CceEEEEccccCH------HHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 4688999999985 457777665 8999999996432 2345578899999999999999987448899999
Q ss_pred ccceeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||.++||... ++.|..... ..+.|+.||+.+|.++..|
T Consensus 131 SS~~vyg~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 171 (357)
T 1rkx_A 131 TSDKCYDNKEWIWGYRENEAMG-----------------------------GYDPYSNSKGCAELVTSSY 171 (357)
T ss_dssp CCGGGBCCCCSSSCBCTTSCBC-----------------------------CSSHHHHHHHHHHHHHHHH
T ss_pred cCHHHhCCCCcCCCCCCCCCCC-----------------------------CCCccHHHHHHHHHHHHHH
Confidence 9999998643 233332111 1257999999998888654
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-13 Score=154.77 Aligned_cols=105 Identities=22% Similarity=0.242 Sum_probs=81.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.++.++.+|+++.. +..+++++|+|||+||.... .+.+...+++|+.||.+++++|++. ++++|||+||
T Consensus 43 ~~~~~~~~Dl~~~~-------~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS 114 (313)
T 3ehe_A 43 EAARLVKADLAADD-------IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTST 114 (313)
T ss_dssp TTEEEECCCTTTSC-------CHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred CCcEEEECcCChHH-------HHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCc
Confidence 56899999999833 45667899999999996432 3456788999999999999999987 6889999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+.+||... +++|+....| .+.|+.||+.+|.++..|
T Consensus 115 ~~vyg~~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~ 152 (313)
T 3ehe_A 115 STVYGEAKVIPTPEDYPTHP-----------------------------ISLYGASKLACEALIESY 152 (313)
T ss_dssp GGGGCSCSSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred hHHhCcCCCCCCCCCCCCCC-----------------------------CCHHHHHHHHHHHHHHHH
Confidence 99998644 4555432111 246999999988888654
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.5e-13 Score=153.12 Aligned_cols=106 Identities=21% Similarity=0.217 Sum_probs=83.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.+|++++ ++++.++.++|+|||+||..... ......+++|+.||.+++++|++. ++++|||+||
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS 127 (337)
T 1r6d_A 55 PRLRFVHGDIRDA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVST 127 (337)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred CCeEEEEcCCCCH------HHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecc
Confidence 4689999999985 46788888999999999976543 344578899999999999999987 7889999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.++||... +++|..... ..+.|+.||+.+|.+++.|
T Consensus 128 ~~vyg~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 165 (337)
T 1r6d_A 128 NQVYGSIDSGSWTESSPLE-----------------------------PNSPYAASKAGSDLVARAY 165 (337)
T ss_dssp GGGGCCCSSSCBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred hHHhCCCCCCCCCCCCCCC-----------------------------CCCchHHHHHHHHHHHHHH
Confidence 99988642 344442111 1246999999988888554
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.49 E-value=4.8e-13 Score=151.97 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=82.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.||++++. +.++.+++++|+|||+||.... .......+++|+.||.+++++|++. + ++|||+||
T Consensus 45 ~~~~~~~~D~~~~~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS 117 (345)
T 2bll_A 45 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPST 117 (345)
T ss_dssp TTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECC
T ss_pred CCeEEEeccccCcH-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEec
Confidence 46899999999853 3466677789999999997653 3455678899999999999999987 5 89999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++||... +++|.....+..| .....+.|+.||+.+|.++..|
T Consensus 118 ~~v~g~~~~~~~~e~~~~~~~~~----------------------~~~~~~~Y~~sK~~~e~~~~~~ 162 (345)
T 2bll_A 118 SEVYGMCSDKYFDEDHSNLIVGP----------------------VNKPRWIYSVSKQLLDRVIWAY 162 (345)
T ss_dssp GGGGBTCCCSSBCTTTCCCBCCC----------------------TTCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCcCCcccccccCc----------------------ccCcccccHHHHHHHHHHHHHH
Confidence 99998643 3555432111000 0011246999999988888654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-13 Score=154.85 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=83.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.+|++++ ++++.+++++|+|||+||..... ..+...+++|+.||.+++++|++. ++++|||+||
T Consensus 81 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS 153 (352)
T 1sb8_A 81 SNFKFIQGDIRNL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAAS 153 (352)
T ss_dssp TTEEEEECCTTSH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEE
T ss_pred CceEEEECCCCCH------HHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecc
Confidence 4689999999984 46788888999999999976543 345578899999999999999987 7899999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++|+... +++|...+. ..+.|+.||+.+|.++..|
T Consensus 154 ~~~~~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 191 (352)
T 1sb8_A 154 SSTYGDHPGLPKVEDTIGK-----------------------------PLSPYAVTKYVNELYADVF 191 (352)
T ss_dssp GGGGTTCCCSSBCTTCCCC-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCCCCC-----------------------------CCChhHHHHHHHHHHHHHH
Confidence 99998643 444443211 1257999999988888654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.6e-13 Score=150.98 Aligned_cols=210 Identities=10% Similarity=0.118 Sum_probs=149.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcC--c-ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN--A-NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~--p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~ 85 (1217)
-+||+.+.-|..+.++|.+.-...+.-..|... . ....+++++.||++++ +++..+++++|+|||+|+...
T Consensus 4 lVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~ 77 (289)
T 3e48_A 4 MLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQ------ESMVEAFKGMDTVVFIPSIIH 77 (289)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCH------HHHHHHTTTCSEEEECCCCCC
T ss_pred EEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCH------HHHHHHHhCCCEEEEeCCCCc
Confidence 478999999999999987642222222122211 1 1236899999999998 899999999999999999764
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccccccc
Q psy13944 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDIL 165 (1217)
Q Consensus 86 f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~ 165 (1217)
.. ..|+.++.+++++|++. ++++|||+||.... + ..|
T Consensus 78 ~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~~-------~---~~~------------------------- 114 (289)
T 3e48_A 78 PS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYADQ-------H---NNP------------------------- 114 (289)
T ss_dssp SH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCCS-------T---TCC-------------------------
T ss_pred cc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCCC-------C---CCC-------------------------
Confidence 21 34899999999999984 78999999994320 0 000
Q ss_pred CCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHH-hcCceeEEeeCCCceecc
Q psy13944 166 IKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV-GLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 166 ~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~-~~G~l~~i~g~~~~~~D~ 244 (1217)
..+...+..+|+.+.+ .+++++++||+.++|+.. ..+..+ ..+. ...+.++..+++
T Consensus 115 -----~~~~~~~~~~e~~~~~--~g~~~~ilrp~~~~~~~~--------------~~~~~~~~~~~--~~~~~g~~~~~~ 171 (289)
T 3e48_A 115 -----FHMSPYFGYASRLLST--SGIDYTYVRMAMYMDPLK--------------PYLPELMNMHK--LIYPAGDGRINY 171 (289)
T ss_dssp -----STTHHHHHHHHHHHHH--HCCEEEEEEECEESTTHH--------------HHHHHHHHHTE--ECCCCTTCEEEE
T ss_pred -----CccchhHHHHHHHHHH--cCCCEEEEeccccccccH--------------HHHHHHHHCCC--EecCCCCceeee
Confidence 1122223355665554 479999999999998621 111122 2232 234567889999
Q ss_pred ccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhch
Q psy13944 245 VPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~ 323 (1217)
++++|+|++++.++..+.. .++.|+++ + .++..|+++.+++.+|.
T Consensus 172 i~~~Dva~~~~~~l~~~~~---------------------------------~g~~~~~~-~~~~s~~e~~~~~~~~~g~ 217 (289)
T 3e48_A 172 ITRNDIARGVIAIIKNPDT---------------------------------WGKRYLLS-GYSYDMKELAAILSEASGT 217 (289)
T ss_dssp ECHHHHHHHHHHHHHCGGG---------------------------------TTCEEEEC-CEEEEHHHHHHHHHHHHTS
T ss_pred EEHHHHHHHHHHHHcCCCc---------------------------------CCceEEeC-CCcCCHHHHHHHHHHHHCC
Confidence 9999999999988876544 16789999 7 89999999999999997
Q ss_pred h
Q psy13944 324 K 324 (1217)
Q Consensus 324 ~ 324 (1217)
+
T Consensus 218 ~ 218 (289)
T 3e48_A 218 E 218 (289)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-13 Score=156.99 Aligned_cols=105 Identities=24% Similarity=0.178 Sum_probs=83.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHH-hcCccEEEEcCccccc-hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVL-REDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L-~~~vdvVfH~AA~v~f-~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
.++.++.+|++++ ++++.+ ..++|+|||+||.+.. .......+++|+.||.+++++|++. +++ |||+||+
T Consensus 68 ~~~~~~~~Dl~d~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~ 139 (362)
T 3sxp_A 68 FKGEVIAADINNP------LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSA 139 (362)
T ss_dssp CCSEEEECCTTCH------HHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEG
T ss_pred cCceEEECCCCCH------HHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcH
Confidence 3578999999985 467777 7899999999997764 3567789999999999999999987 666 9999999
Q ss_pred eeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 627 YSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 627 ~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++||... +++|+....| .+.|+.||+++|.++..|
T Consensus 140 ~vyg~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~ 175 (362)
T 3sxp_A 140 GVYGNTKAPNVVGKNESP-----------------------------ENVYGFSKLCMDEFVLSH 175 (362)
T ss_dssp GGGCSCCSSBCTTSCCCC-----------------------------SSHHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 9998754 4555532221 256999999998888654
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-12 Score=152.57 Aligned_cols=104 Identities=17% Similarity=0.120 Sum_probs=80.0
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhc--C-ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLRE--D-VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~--~-vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
++++.+|++++ +.++.+++ + +|+|||+||..... +.....+++|+.||.+|+++|++. ++++|||+|
T Consensus 71 ~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~S 143 (397)
T 1gy8_A 71 AALEVGDVRNE------DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSS 143 (397)
T ss_dssp CEEEESCTTCH------HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEECCCCCH------HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEEC
Confidence 89999999985 35666665 5 99999999987643 455678999999999999999987 788999999
Q ss_pred cceeecCcc---------cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK---------KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~---------~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+++++... +++|... ....+.|+.||+++|.++..|
T Consensus 144 S~~v~g~~~~~~~~~~~~~~~E~~~-----------------------------~~p~~~Y~~sK~~~e~~~~~~ 189 (397)
T 1gy8_A 144 SAAIFGNPTMGSVSTNAEPIDINAK-----------------------------KSPESPYGESKLIAERMIRDC 189 (397)
T ss_dssp EGGGTBSCCC-----CCCCBCTTSC-----------------------------CBCSSHHHHHHHHHHHHHHHH
T ss_pred CHHHhCCCCcccccccccCcCccCC-----------------------------CCCCCchHHHHHHHHHHHHHH
Confidence 999987532 2222211 011357999999998888654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.5e-14 Score=170.66 Aligned_cols=139 Identities=21% Similarity=0.197 Sum_probs=89.1
Q ss_pred ccccccccccccccc---ccccccccchhhhhhhhcCcCCcCcEEEEEcccCC-CCCCCCHHHHHHHhcCccEEEEcCcc
Q psy13944 511 RSLSKYAIHVPDLTK---SRLRDFFADDAFDLLRKENVNFTERIVVLTADLQS-DGLGLDEKAKEVLREDVNIVFHVAAT 586 (1217)
Q Consensus 511 ~GirvYlLkr~~stl---eRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd-~~LGLs~~~~~~L~~~vdvVfH~AA~ 586 (1217)
.|.+++|+.|+.+.. +++.+.++.. |.... ......+++++.||+++ +.++ +..++|+|||+||.
T Consensus 173 ~g~~V~~l~R~~~~~~~~~~l~~~l~~~-~~~~~--~~~~~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~ 241 (508)
T 4f6l_B 173 YSHRIYCFIRADNEEIAWYKLMTNLNDY-FSEET--VEMMLSNIEVIVGDFECMDDVV--------LPENMDTIIHAGAR 241 (508)
T ss_dssp TEEEEEEEEESSSHHHHHHHHHHHHHHH-SCHHH--HHHHSTTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC
T ss_pred cCCEEEEEECCCChHHHHHHHHHHHHHh-ccccc--chhccCceEEEecCCcccccCC--------CccCCCEEEECCce
Confidence 367889998876532 2222222211 10000 01124689999999999 5664 56789999999999
Q ss_pred ccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc-------cccccccCCCCChhHHHHHHhhCCcc
Q psy13944 587 VKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-------KIEEKFYEPLYTHIEMEQIINSCSHT 659 (1217)
Q Consensus 587 v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~-------~I~E~~y~~p~~p~~~~~l~~~~~~~ 659 (1217)
+++..++....++|+.||.+++++|++ +.++|||+||.++ |... ++.|.....
T Consensus 242 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~----------------- 301 (508)
T 4f6l_B 242 TDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK----------------- 301 (508)
T ss_dssp --------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS-----------------
T ss_pred ecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCcccccccccc-----------------
Confidence 988888888899999999999999998 5789999999998 5421 233331100
Q ss_pred hhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 660 ELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 660 ~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.....+.|+.||+++|.++..
T Consensus 302 ---------~~~~~~~Y~~sK~~~E~~~~~ 322 (508)
T 4f6l_B 302 ---------GQLLTSPYTRSKFYSELKVLE 322 (508)
T ss_dssp ---------SBCCCSHHHHHHHHHHHHHHH
T ss_pred ---------cccCCCcHHHHHHHHHHHHHH
Confidence 012457899999998888854
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.5e-14 Score=161.01 Aligned_cols=220 Identities=10% Similarity=0.045 Sum_probs=158.4
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcChhHHHhhhc--Cc--------ccCCCeEEEEccCCCCCCCCCHHHHHHhcC--Cc
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFADDAFDRLRKE--NA--------NFTERIVVLTADLQSDGLGLDEKEKKVLRE--DV 74 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~--~p--------~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~V 74 (1217)
+.-+||+.+.-|..+.++|.+.- ..+.-..|.. .+ ....+++++.||++++ +++..+++ ++
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~------~~l~~~~~~~~~ 84 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ------EAMEKILKEHEI 84 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCH------HHHHHHHHHTTC
T ss_pred eEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCH------HHHHHHHhhCCC
Confidence 35689999999999999998753 2232222211 00 1135899999999997 89999999 99
Q ss_pred cEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 75 NIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 75 DiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
|+|||+||.. |+.++.+++++|++.+.+++||+ |+ +|.. .+|.....
T Consensus 85 d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~--~~e~~~~~--------------- 131 (346)
T 3i6i_A 85 DIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-SE---FGHD--VNRADPVE--------------- 131 (346)
T ss_dssp CEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-SC---CSSC--TTTCCCCT---------------
T ss_pred CEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-cc---cCCC--CCccCcCC---------------
Confidence 9999999973 88999999999999744999986 42 3321 12211100
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i 234 (1217)
..+.|+.+|+.+|+++++ .+++++++||+.++|..... + ..+ ......+....+
T Consensus 132 --------------p~~~y~~sK~~~e~~l~~--~g~~~tivrpg~~~g~~~~~---~----~~~---~~~~~~~~~~~~ 185 (346)
T 3i6i_A 132 --------------PGLNMYREKRRVRQLVEE--SGIPFTYICCNSIASWPYYN---N----IHP---SEVLPPTDFFQI 185 (346)
T ss_dssp --------------THHHHHHHHHHHHHHHHH--TTCCBEEEECCEESSCCCSC---C------------CCCCSSCEEE
T ss_pred --------------CcchHHHHHHHHHHHHHH--cCCCEEEEEecccccccCcc---c----ccc---ccccCCCceEEE
Confidence 015699999999999987 58999999999999964321 1 110 001113334567
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc-CC-ccCchH
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN-HG-NYDTTN 312 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~-sg-~~s~~e 312 (1217)
+++++..+++++++|+|++++.++..+.. .++.|+++ .+ .++..|
T Consensus 186 ~g~g~~~~~~i~~~Dva~~~~~~l~~~~~---------------------------------~~~~~~i~g~~~~~s~~e 232 (346)
T 3i6i_A 186 YGDGNVKAYFVAGTDIGKFTMKTVDDVRT---------------------------------LNKSVHFRPSCNCLNINE 232 (346)
T ss_dssp ETTSCCCEEEECHHHHHHHHHHHTTCGGG---------------------------------TTEEEECCCGGGEECHHH
T ss_pred ccCCCceEEecCHHHHHHHHHHHHhCccc---------------------------------cCeEEEEeCCCCCCCHHH
Confidence 88999999999999999999988876543 25567776 34 899999
Q ss_pred HHHHHHHhhchhh
Q psy13944 313 HVNYIKQNIKEKF 325 (1217)
Q Consensus 313 l~~~ia~~~g~~~ 325 (1217)
+++.+++.+|.++
T Consensus 233 ~~~~~~~~~g~~~ 245 (346)
T 3i6i_A 233 LASVWEKKIGRTL 245 (346)
T ss_dssp HHHHHHHHHTSCC
T ss_pred HHHHHHHHHCCCC
Confidence 9999999999763
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.1e-13 Score=153.64 Aligned_cols=78 Identities=24% Similarity=0.357 Sum_probs=64.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCc-EEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLD-SFIY 622 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk-~fV~ 622 (1217)
.+++++.+|++++ ++++.++++ +|+|||+||..... +.....+++|+.||.+|+++|++. +++ +|||
T Consensus 50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~ 122 (347)
T 1orr_A 50 GNFEFVHGDIRNK------NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIY 122 (347)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 3588999999984 467777777 99999999976643 355678899999999999999987 565 9999
Q ss_pred EccceeecCcc
Q psy13944 623 VSTAYSNCNIK 633 (1217)
Q Consensus 623 vSTa~v~g~~~ 633 (1217)
+||+++||...
T Consensus 123 ~SS~~v~g~~~ 133 (347)
T 1orr_A 123 SSTNKVYGDLE 133 (347)
T ss_dssp EEEGGGGTTCT
T ss_pred eccHHHhCCCC
Confidence 99999998643
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=4.8e-13 Score=151.73 Aligned_cols=106 Identities=16% Similarity=0.077 Sum_probs=81.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNL-DSFIY 622 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~l-k~fV~ 622 (1217)
.+++++.+|++++ ++++.++++ +|+|||+||..... ......+++|+.||.+++++|++. ++ ++|||
T Consensus 63 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~ 135 (335)
T 1rpn_A 63 GDIQYEDGDMADA------CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQ 135 (335)
T ss_dssp GGEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CceEEEECCCCCH------HHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEE
Confidence 4689999999984 466776664 69999999976643 456678899999999999999987 54 89999
Q ss_pred EccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 623 VSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 623 vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+||+++|+... +++|.....| .+.|+.||+.+|.+++.|
T Consensus 136 ~SS~~v~g~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~ 176 (335)
T 1rpn_A 136 ASTSEMFGLIQAERQDENTPFYP-----------------------------RSPYGVAKLYGHWITVNY 176 (335)
T ss_dssp EEEGGGGCSCSSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred EeCHHHhCCCCCCCCCcccCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 99999998643 4455432111 246999999988888554
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=153.65 Aligned_cols=224 Identities=10% Similarity=0.015 Sum_probs=159.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc-----ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA-----NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAA 82 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p-----~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA 82 (1217)
.-+||+.+.-|..+.++|.+.....+.-..|.... ....+++++.||++++ +++..+++++|+|||+|+
T Consensus 8 ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 8 VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQ------VIMELALNGAYATFIVTN 81 (299)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCH------HHHHHHHTTCSEEEECCC
T ss_pred EEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCH------HHHHHHHhcCCEEEEeCC
Confidence 45789999999999999987542222211111110 0124689999999998 899999999999999998
Q ss_pred cCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccc
Q psy13944 83 TVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLN 162 (1217)
Q Consensus 83 ~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~t 162 (1217)
..... ..+.|+.++.+++++|++. ++++|||+||..+++...
T Consensus 82 ~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~-------------------------------- 123 (299)
T 2wm3_A 82 YWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTA-------------------------------- 123 (299)
T ss_dssp HHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTT--------------------------------
T ss_pred CCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCC--------------------------------
Confidence 53211 2357899999999999985 789999988876654210
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE-eeCCCce
Q psy13944 163 DILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV-YQNTSNI 241 (1217)
Q Consensus 163 p~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i-~g~~~~~ 241 (1217)
+..++.|+.+|..+|+++++. +++++++||+.++|+... .+.... ...|....+ ...++..
T Consensus 124 ----~~~~~~y~~sK~~~e~~~~~~--gi~~~ilrp~~~~~~~~~---~~~~~~---------~~~g~~~~~~~~~~~~~ 185 (299)
T 2wm3_A 124 ----GRLAAAHFDGKGEVEEYFRDI--GVPMTSVRLPCYFENLLS---HFLPQK---------APDGKSYLLSLPTGDVP 185 (299)
T ss_dssp ----TSCCCHHHHHHHHHHHHHHHH--TCCEEEEECCEEGGGGGT---TTCCEE---------CTTSSSEEECCCCTTSC
T ss_pred ----CcccCchhhHHHHHHHHHHHC--CCCEEEEeecHHhhhchh---hcCCcc---------cCCCCEEEEEecCCCCc
Confidence 012367999999999999874 799999999999997432 111110 012311111 2236788
Q ss_pred eccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHHHhh
Q psy13944 242 VDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIKQNI 321 (1217)
Q Consensus 242 ~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia~~~ 321 (1217)
.++|+++|++++++.++..+.. ..++.|++++..++..|+++.+.+.+
T Consensus 186 ~~~i~~~Dva~~~~~~l~~~~~--------------------------------~~g~~~~~~g~~~s~~e~~~~~~~~~ 233 (299)
T 2wm3_A 186 MDGMSVSDLGPVVLSLLKMPEK--------------------------------YVGQNIGLSTCRHTAEEYAALLTKHT 233 (299)
T ss_dssp EEEECGGGHHHHHHHHHHSHHH--------------------------------HTTCEEECCSEEECHHHHHHHHHHHH
T ss_pred cceecHHHHHHHHHHHHcChhh--------------------------------hCCeEEEeeeccCCHHHHHHHHHHHH
Confidence 9999999999999988865422 02668898866899999999999999
Q ss_pred chhh
Q psy13944 322 KEKF 325 (1217)
Q Consensus 322 g~~~ 325 (1217)
|.+.
T Consensus 234 g~~~ 237 (299)
T 2wm3_A 234 RKVV 237 (299)
T ss_dssp SSCE
T ss_pred CCCc
Confidence 9763
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.6e-13 Score=149.61 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=79.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.+|++++. +..++++ |+|||+||.... .+.....+++|+.||.+++++|++. ++++|||+||
T Consensus 43 ~~~~~~~~Dl~d~~-------~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS 113 (312)
T 3ko8_A 43 PSAELHVRDLKDYS-------WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASS 113 (312)
T ss_dssp TTSEEECCCTTSTT-------TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEE
T ss_pred CCceEEECccccHH-------HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCc
Confidence 45789999999975 2344455 999999996432 3445678899999999999999987 7889999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++||... +++|+....| .+.|+.||+.+|.+++.|
T Consensus 114 ~~vyg~~~~~~~~e~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~ 151 (312)
T 3ko8_A 114 STVYGDADVIPTPEEEPYKP-----------------------------ISVYGAAKAAGEVMCATY 151 (312)
T ss_dssp GGGGCSCSSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCCCCCCCC-----------------------------CChHHHHHHHHHHHHHHH
Confidence 99998754 4555532221 246999999988888654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.2e-13 Score=149.85 Aligned_cols=107 Identities=22% Similarity=0.199 Sum_probs=82.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.+|++++ +.++.++.++|+|||+||..... +.....+++|+.||.+++++|++.+..++|||+||
T Consensus 54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (336)
T 2hun_A 54 PRYTFVKGDVADY------ELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST 127 (336)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 4689999999984 46777778999999999986543 34457889999999999999998733479999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.++||... +++|..... ..+.|+.||+.+|.++++|
T Consensus 128 ~~vyg~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 165 (336)
T 2hun_A 128 DEVYGDILKGSFTENDRLM-----------------------------PSSPYSATKAASDMLVLGW 165 (336)
T ss_dssp GGGGCCCSSSCBCTTBCCC-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCcCCCCCCC-----------------------------CCCccHHHHHHHHHHHHHH
Confidence 99988642 444442111 1257999999988888654
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=147.82 Aligned_cols=199 Identities=11% Similarity=-0.017 Sum_probs=129.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
-+||+.+.-|..+.++|.+.... .+..+-..... ....+++++.+|++++ ++ ..++++|+|||+||....
T Consensus 4 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~------~~--~~~~~~d~vi~~ag~~~~ 75 (224)
T 3h2s_A 4 AVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVL------TE--ADLDSVDAVVDALSVPWG 75 (224)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGC------CH--HHHTTCSEEEECCCCCTT
T ss_pred EEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccc------cH--hhcccCCEEEECCccCCC
Confidence 46899999999999999874221 11111000000 1235899999999998 44 566899999999998621
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccC
Q psy13944 87 DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILI 166 (1217)
Q Consensus 87 ~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~ 166 (1217)
.. ...+|+.++.+++++|++. + ++||++||+.++.....-....+. ++.. +
T Consensus 76 ~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~----------------~~~~----~--- 126 (224)
T 3h2s_A 76 SG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADHPMILD----------------FPES----A--- 126 (224)
T ss_dssp SS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSSCGGGG----------------CCGG----G---
T ss_pred cc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCcccccc----------------CCCC----C---
Confidence 12 2467999999999999985 5 899999998654432210000000 0000 0
Q ss_pred CCCCChHHHHHHHHHHHHHHh-cCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccc
Q psy13944 167 KPMPNTYTLSKNACEQMVREK-MDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMV 245 (1217)
Q Consensus 167 ~~~PNtYa~SK~~AE~lv~~~-~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~V 245 (1217)
...+.|+.+|+.+|.+.... ..+++++++||+.+||+.. ..++.. .... +. .+....+++
T Consensus 127 -~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~--~~~~~~------------~~~~---~~-~~~~~~~~i 187 (224)
T 3h2s_A 127 -ASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGP--ATSYVA------------GKDT---LL-VGEDGQSHI 187 (224)
T ss_dssp -GGSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCC--CCCEEE------------ESSB---CC-CCTTSCCBC
T ss_pred -ccchhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccCCCc--ccCcee------------cccc---cc-cCCCCCceE
Confidence 01256999999999653332 2789999999999999832 222211 0010 11 134557899
Q ss_pred cHHHHHHHHHHHHHhhhh
Q psy13944 246 PGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 246 pVDdVvnAii~aa~~~~~ 263 (1217)
+++|+|++++.++.++..
T Consensus 188 ~~~DvA~~~~~~l~~~~~ 205 (224)
T 3h2s_A 188 TTGNMALAILDQLEHPTA 205 (224)
T ss_dssp CHHHHHHHHHHHHHSCCC
T ss_pred eHHHHHHHHHHHhcCccc
Confidence 999999999999886554
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-12 Score=149.51 Aligned_cols=76 Identities=22% Similarity=0.300 Sum_probs=64.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.+|++++ ++++.+++++|+|||+||..... ......+++|+.||.+++++|++. ++ +|||+||
T Consensus 54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS 125 (348)
T 1oc2_A 54 DRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVST 125 (348)
T ss_dssp SSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred CCeEEEECCCCCH------HHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecc
Confidence 4689999999984 46888889999999999987643 334578899999999999999987 56 9999999
Q ss_pred ceeecCc
Q psy13944 626 AYSNCNI 632 (1217)
Q Consensus 626 a~v~g~~ 632 (1217)
+++||..
T Consensus 126 ~~vyg~~ 132 (348)
T 1oc2_A 126 DEVYGDL 132 (348)
T ss_dssp GGGGCCB
T ss_pred cceeCCC
Confidence 9998764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.4e-12 Score=144.39 Aligned_cols=105 Identities=24% Similarity=0.252 Sum_probs=82.6
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
+++++.+|++++ +.++.+++ ++|+|||+||..... ......+++|+.||.+|+++|++. ++++|||+|
T Consensus 45 ~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~S 117 (330)
T 2c20_A 45 GAKFYNGDLRDK------AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSS 117 (330)
T ss_dssp TSEEEECCTTCH------HHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CcEEEECCCCCH------HHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeC
Confidence 688999999984 46777777 899999999977643 345678899999999999999987 789999999
Q ss_pred cceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+++|+... +++|..... ..+.|+.||+.+|.++..|
T Consensus 118 s~~~~~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 156 (330)
T 2c20_A 118 TAATYGEVDVDLITEETMTN-----------------------------PTNTYGETKLAIEKMLHWY 156 (330)
T ss_dssp CGGGGCSCSSSSBCTTSCCC-----------------------------CSSHHHHHHHHHHHHHHHH
T ss_pred CceeeCCCCCCCCCcCCCCC-----------------------------CCChHHHHHHHHHHHHHHH
Confidence 999998643 455543211 1257999999988888654
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-14 Score=153.89 Aligned_cols=185 Identities=17% Similarity=0.067 Sum_probs=135.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhc-ChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA-DDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~-~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
.-.||+.+.-|..+.++|.+... ..+.-..|.... ...+++++.+|++++ +++..++ +|+|||+|+....
T Consensus 8 vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~~~~~~~~~~D~~~~------~~~~~~~--~d~vi~~a~~~~~ 78 (215)
T 2a35_A 8 VLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-EHPRLDNPVGPLAEL------LPQLDGS--IDTAFCCLGTTIK 78 (215)
T ss_dssp EEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-CCTTEECCBSCHHHH------GGGCCSC--CSEEEECCCCCHH
T ss_pred EEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-cCCCceEEeccccCH------HHHHHhh--hcEEEECeeeccc
Confidence 55889999999999999987543 133322222222 345788999999887 6666666 9999999997643
Q ss_pred -ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccccccc
Q psy13944 87 -DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDIL 165 (1217)
Q Consensus 87 -~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~ 165 (1217)
.+..+..+++|+.|+.+++++|++. ++++|||+||..+++. +
T Consensus 79 ~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~-----------~------------------------- 121 (215)
T 2a35_A 79 EAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK-----------S------------------------- 121 (215)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-----------C-------------------------
T ss_pred cCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-----------C-------------------------
Confidence 3567789999999999999999984 7889999999887642 0
Q ss_pred CCCCCChHHHHHHHHHHHHHHhcCCCC-EEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc
Q psy13944 166 IKPMPNTYTLSKNACEQMVREKMDKLP-LGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 166 ~~~~PNtYa~SK~~AE~lv~~~~~gLP-vvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~ 244 (1217)
++.|+.+|+.+|++++.. +++ ++++||+.+||+...+ .+...+ ... ...+ ++ ...++
T Consensus 122 ----~~~y~~sK~~~e~~~~~~--~~~~~~~vrp~~v~g~~~~~--~~~~~~----------~~~-~~~~-~~--~~~~~ 179 (215)
T 2a35_A 122 ----SIFYNRVKGELEQALQEQ--GWPQLTIARPSLLFGPREEF--RLAEIL----------AAP-IARI-LP--GKYHG 179 (215)
T ss_dssp ----SSHHHHHHHHHHHHHTTS--CCSEEEEEECCSEESTTSCE--EGGGGT----------TCC-CC-------CHHHH
T ss_pred ----ccHHHHHHHHHHHHHHHc--CCCeEEEEeCceeeCCCCcc--hHHHHH----------HHh-hhhc-cC--CCcCc
Confidence 257999999999999874 799 9999999999986542 122211 111 1111 22 26799
Q ss_pred ccHHHHHHHHHHHHHh
Q psy13944 245 VPGDLVVNILLAAAWD 260 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~ 260 (1217)
++++|+|++++.++.+
T Consensus 180 i~~~Dva~~~~~~~~~ 195 (215)
T 2a35_A 180 IEACDLARALWRLALE 195 (215)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred EeHHHHHHHHHHHHhc
Confidence 9999999999988754
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.44 E-value=7.6e-13 Score=149.16 Aligned_cols=106 Identities=15% Similarity=0.200 Sum_probs=81.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
+++++.+|++++ ++++.++++ +|+|||+||..... +.+...+++|+.||.+++++|+++++.++|||+|
T Consensus 52 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 125 (321)
T 2pk3_A 52 NVEMISLDIMDS------QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG 125 (321)
T ss_dssp TEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred eeeEEECCCCCH------HHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 588999999974 467777665 89999999986643 3566789999999999999998864588999999
Q ss_pred cceeecCc----ccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNI----KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~----~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|.++||.. .+++|+.... ..+.|+.||+.+|.++..+
T Consensus 126 S~~v~g~~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~E~~~~~~ 166 (321)
T 2pk3_A 126 SSEEYGMILPEESPVSEENQLR-----------------------------PMSPYGVSKASVGMLARQY 166 (321)
T ss_dssp EGGGTBSCCGGGCSBCTTSCCB-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred cHHhcCCCCCCCCCCCCCCCCC-----------------------------CCCccHHHHHHHHHHHHHH
Confidence 99998853 2455543211 1247999999988888554
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.8e-14 Score=148.81 Aligned_cols=207 Identities=14% Similarity=0.016 Sum_probs=125.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKFD 87 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f~ 87 (1217)
-+||+.+.-|..+.++|.+.... .+.++-.+.......+++++.+|++++ ++ ..+.++|+|||+|+....
T Consensus 4 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~------~~--~~~~~~d~vi~~ag~~~~- 74 (221)
T 3ew7_A 4 GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDL------TL--SDLSDQNVVVDAYGISPD- 74 (221)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGC------CH--HHHTTCSEEEECCCSSTT-
T ss_pred EEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccCh------hh--hhhcCCCEEEECCcCCcc-
Confidence 46889999999999999874321 111111001111126899999999998 44 556899999999998532
Q ss_pred cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc---ccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 88 EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK---IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 88 e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~---I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
....|+.++.+++++|++. +.+++|++||+.++..... ..|..
T Consensus 75 -----~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~---------------------------- 120 (221)
T 3ew7_A 75 -----EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLESK---------------------------- 120 (221)
T ss_dssp -----TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC-------------------------------------------
T ss_pred -----ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCCccccccC----------------------------
Confidence 1356999999999999984 6889999999876543211 01100
Q ss_pred cCCCC-CChHHHHHHHHHHHHHHh--cCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCce
Q psy13944 165 LIKPM-PNTYTLSKNACEQMVREK--MDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNI 241 (1217)
Q Consensus 165 ~~~~~-PNtYa~SK~~AE~lv~~~--~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~ 241 (1217)
... .+.|+.+|..+|.+..-. ..+++++++||+.+||+. +..+. + . .. +....+.+++
T Consensus 121 --~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~--~~~~~---~-------~-~~-~~~~~~~~~~--- 181 (221)
T 3ew7_A 121 --GLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG--ERTGD---Y-------Q-IG-KDHLLFGSDG--- 181 (221)
T ss_dssp ------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC------------------------------------
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCC--CccCc---e-------E-ec-cccceecCCC---
Confidence 011 145999999999973322 478999999999999983 21111 0 0 01 1111122222
Q ss_pred eccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCch
Q psy13944 242 VDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNV 289 (1217)
Q Consensus 242 ~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~ 289 (1217)
.++++++|+|++++.++.++.. .++.|++.+|...+
T Consensus 182 ~~~i~~~Dva~~~~~~l~~~~~------------~g~~~~~~~~~~~~ 217 (221)
T 3ew7_A 182 NSFISMEDYAIAVLDEIERPNH------------LNEHFTVAGKLEHH 217 (221)
T ss_dssp --CCCHHHHHHHHHHHHHSCSC------------TTSEEECCC-----
T ss_pred CceEeHHHHHHHHHHHHhCccc------------cCCEEEECCCCccc
Confidence 3699999999999999887554 35566666666543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=5.1e-13 Score=154.27 Aligned_cols=223 Identities=14% Similarity=0.099 Sum_probs=153.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCc------ccCCCeEEEEcc-CCCCCCCCCHHHHHHhcCCccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENA------NFTERIVVLTAD-LQSDGLGLDEKEKKVLREDVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p------~~~~kI~~V~GD-l~d~~LGLs~edl~~L~~~VDiViH~ 80 (1217)
.-+||+.+.-|..+.++|.+... .+.-..|.... ....+++++.|| ++++ +++..+++++|+|||+
T Consensus 8 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~------~~l~~~~~~~d~Vi~~ 80 (352)
T 1xgk_A 8 IAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV------PLMDTLFEGAHLAFIN 80 (352)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCH------HHHHHHHTTCSEEEEC
T ss_pred EEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCcEEEECCccCCH------HHHHHHHhcCCEEEEc
Confidence 45899999999999999987322 22111111110 012478999999 9988 8899999999999999
Q ss_pred CccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 81 AATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 81 AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
|+.... ..|+.+ ++++++|++.+++++|||+||.++. .|..
T Consensus 81 a~~~~~--------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~---------~~~~--------------------- 121 (352)
T 1xgk_A 81 TTSQAG--------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHS---------LYGP--------------------- 121 (352)
T ss_dssp CCSTTS--------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGG---------GTSS---------------------
T ss_pred CCCCCc--------HHHHHH-HHHHHHHHHcCCccEEEEeCCcccc---------ccCC---------------------
Confidence 986421 347777 9999999986328999999997620 0100
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCcee-EEeeCCC
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMR-TVYQNTS 239 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~-~i~g~~~ 239 (1217)
..++.|+.||+.+|+++++. +++++|+||+ +||+...... ..+.. ......|... .++++++
T Consensus 122 -------~~~~~y~~sK~~~E~~~~~~--gi~~~ivrpg-~~g~~~~~~~---~~~~~----~~~~~~g~~~~~~~~~~~ 184 (352)
T 1xgk_A 122 -------WPAVPMWAPKFTVENYVRQL--GLPSTFVYAG-IYNNNFTSLP---YPLFQ----MELMPDGTFEWHAPFDPD 184 (352)
T ss_dssp -------CCCCTTTHHHHHHHHHHHTS--SSCEEEEEEC-EEGGGCBSSS---CSSCB----EEECTTSCEEEEESSCTT
T ss_pred -------CCCccHHHHHHHHHHHHHHc--CCCEEEEecc-eecCCchhcc---ccccc----ccccCCCceEEeeccCCC
Confidence 11356999999999999875 8999999987 5776432110 00000 0001234332 3466778
Q ss_pred ceeccccH-HHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHH
Q psy13944 240 NIVDMVPG-DLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIK 318 (1217)
Q Consensus 240 ~~~D~VpV-DdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia 318 (1217)
...+++++ ||+|++++.++.+... ...++.|+++++.++..|+++.++
T Consensus 185 ~~~~~i~v~~Dva~ai~~~l~~~~~-------------------------------~~~g~~~~l~~~~~s~~e~~~~i~ 233 (352)
T 1xgk_A 185 IPLPWLDAEHDVGPALLQIFKDGPQ-------------------------------KWNGHRIALTFETLSPVQVCAAFS 233 (352)
T ss_dssp SCEEEECHHHHHHHHHHHHHHHCHH-------------------------------HHTTCEEEECSEEECHHHHHHHHH
T ss_pred CceeeEecHHHHHHHHHHHHhCCch-------------------------------hhCCeEEEEecCCCCHHHHHHHHH
Confidence 89999999 9999999988875321 002667888866888889999888
Q ss_pred Hhhchh
Q psy13944 319 QNIKEK 324 (1217)
Q Consensus 319 ~~~g~~ 324 (1217)
+.+|.+
T Consensus 234 ~~~G~~ 239 (352)
T 1xgk_A 234 RALNRR 239 (352)
T ss_dssp HHHTSC
T ss_pred HHHCCC
Confidence 888875
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=149.49 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=80.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCC---cEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNL---DSF 620 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~l---k~f 620 (1217)
.+++++.+|++++ +++..++++ +|+|||+||..... +.....+++|+.||.+|+++|++. ++ ++|
T Consensus 79 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~i 151 (375)
T 1t2a_A 79 GNMKLHYGDLTDS------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKF 151 (375)
T ss_dssp -CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEE
T ss_pred CCceEEEccCCCH------HHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceE
Confidence 4689999999984 456666664 69999999987653 445578899999999999999986 55 799
Q ss_pred EEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 621 IYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 621 V~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+||+++|+... +++|+....| .+.|+.||+.+|.+++.|
T Consensus 152 v~~SS~~~~~~~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~ 194 (375)
T 1t2a_A 152 YQASTSELYGKVQEIPQKETTPFYP-----------------------------RSPYGAAKLYAYWIVVNF 194 (375)
T ss_dssp EEEEEGGGTCSCSSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhCCCCCCCCCccCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 9999999988643 4555422111 246999999988888554
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.42 E-value=4e-13 Score=158.55 Aligned_cols=138 Identities=21% Similarity=0.201 Sum_probs=88.0
Q ss_pred ccccccccccccc---ccccccccccchhhhh-hhhcCcCCcCcEEEEEcccCC-CCCCCCHHHHHHHhcCccEEEEcCc
Q psy13944 511 RSLSKYAIHVPDL---TKSRLRDFFADDAFDL-LRKENVNFTERIVVLTADLQS-DGLGLDEKAKEVLREDVNIVFHVAA 585 (1217)
Q Consensus 511 ~GirvYlLkr~~s---tleRarkilk~~vfd~-l~~~~~~~~~kV~~V~GDltd-~~LGLs~~~~~~L~~~vdvVfH~AA 585 (1217)
.|.+++++.|+.+ ..+++.+.+... |.. +.. ....+++++.||+++ +.++ ...++|+|||+||
T Consensus 92 ~g~~V~~~~R~~~~~~~~~~l~~~l~~~-~~~~~~~---~~~~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~ 159 (427)
T 4f6c_A 92 YSHRIYCFIRADNEEIAWYKLMTNLNDY-FSEETVE---MMLSNIEVIVGDFECMDDVV--------LPENMDTIIHAGA 159 (427)
T ss_dssp TEEEEEEEEECSSHHHHHHHHHHHHHHH-SCHHHHH---HHHTTEEEEEECC---CCCC--------CSSCCSEEEECCC
T ss_pred CCCEEEEEECCCChHHHHHHHHHHHHHh-ccccccc---cccCceEEEeCCCCCcccCC--------CcCCCCEEEECCc
Confidence 4678888888765 222333222221 100 000 113679999999999 4443 4578999999999
Q ss_pred cccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc-------cccccccCCCCChhHHHHHHhhCCc
Q psy13944 586 TVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK-------KIEEKFYEPLYTHIEMEQIINSCSH 658 (1217)
Q Consensus 586 ~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~-------~I~E~~y~~p~~p~~~~~l~~~~~~ 658 (1217)
.+.+...+...+++|+.||.+++++|++ +.++|||+||.++ |... ++.|.....
T Consensus 160 ~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~---------------- 220 (427)
T 4f6c_A 160 RTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK---------------- 220 (427)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS----------------
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCcccccccccc----------------
Confidence 9888888888999999999999999998 5789999999998 5421 233332110
Q ss_pred chhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 659 TELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 659 ~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.....+.|+.||+++|.+++.
T Consensus 221 ----------~~~~~~~Y~~sK~~~E~~~~~ 241 (427)
T 4f6c_A 221 ----------GQLLTSPYTRSKFYSELKVLE 241 (427)
T ss_dssp ----------SCCCCSHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCchHHHHHHHHHHHHH
Confidence 112447899999998888854
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.1e-12 Score=145.58 Aligned_cols=78 Identities=26% Similarity=0.255 Sum_probs=63.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhc-CCCc----
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEM-KNLD---- 618 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~-~~lk---- 618 (1217)
.+++++.+|++++ +++..+++ ++|+|||+||..... +.....+++|+.||.+++++|++. .+++
T Consensus 50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~ 123 (361)
T 1kew_A 50 NRYNFEHADICDS------AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKK 123 (361)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHH
T ss_pred CCeEEEECCCCCH------HHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 4689999999984 46777776 899999999986543 344578899999999999999874 2466
Q ss_pred ---EEEEEccceeecCc
Q psy13944 619 ---SFIYVSTAYSNCNI 632 (1217)
Q Consensus 619 ---~fV~vSTa~v~g~~ 632 (1217)
+|||+||+++||..
T Consensus 124 ~~~~iv~~SS~~v~g~~ 140 (361)
T 1kew_A 124 NNFRFHHISTDEVYGDL 140 (361)
T ss_dssp HHCEEEEEEEGGGGCCC
T ss_pred cCceEEEeCCHHHhCCC
Confidence 99999999998864
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=5.5e-12 Score=143.75 Aligned_cols=107 Identities=18% Similarity=0.181 Sum_probs=82.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.+|++++ ++++.+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+
T Consensus 58 ~~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~ 130 (348)
T 1ek6_A 58 RSVEFEEMDILDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS 130 (348)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence 4688999999984 46777776 799999999976543 345578899999999999999986 78899999
Q ss_pred ccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+++||... +++|..... +..+.|+.||+.+|.+++.|
T Consensus 131 SS~~~~g~~~~~~~~E~~~~~----------------------------p~~~~Y~~sK~~~e~~~~~~ 171 (348)
T 1ek6_A 131 SSATVYGNPQYLPLDEAHPTG----------------------------GCTNPYGKSKFFIEEMIRDL 171 (348)
T ss_dssp EEGGGGCSCSSSSBCTTSCCC----------------------------CCSSHHHHHHHHHHHHHHHH
T ss_pred CcHHHhCCCCCCCcCCCCCCC----------------------------CCCCchHHHHHHHHHHHHHH
Confidence 9999998632 445542111 12357999999999888654
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.8e-12 Score=144.57 Aligned_cols=109 Identities=14% Similarity=0.073 Sum_probs=75.9
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc-hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f-~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
+++++.+|++++ +++..+++++|+|||+||.... .......+++|+.||.+++++|++. ++++|||+||.++
T Consensus 57 ~~~~~~~Dl~d~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~ 129 (342)
T 2x4g_A 57 EPECRVAEMLDH------AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYA 129 (342)
T ss_dssp CCEEEECCTTCH------HHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGG
T ss_pred CeEEEEecCCCH------HHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHh
Confidence 688999999984 4688888999999999997653 2345568899999999999999987 7899999999999
Q ss_pred ecCccc---ccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 629 NCNIKK---IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 629 ~g~~~~---I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+.... .+|+....|. ....+.|+.||+.+|.++..|
T Consensus 130 ~~~~~~~~~~~E~~~~~p~-------------------------~~~~~~Y~~sK~~~e~~~~~~ 169 (342)
T 2x4g_A 130 MPRHPQGLPGHEGLFYDSL-------------------------PSGKSSYVLCKWALDEQAREQ 169 (342)
T ss_dssp SCCCTTSSCBCTTCCCSSC-------------------------CTTSCHHHHHHHHHHHHHHHH
T ss_pred hCcCCCCCCCCCCCCCCcc-------------------------ccccChHHHHHHHHHHHHHHH
Confidence 876431 2333211110 001467999999988888554
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.39 E-value=4.6e-13 Score=144.97 Aligned_cols=194 Identities=13% Similarity=-0.003 Sum_probs=138.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcc---cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENAN---FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAAT 83 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~---~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~ 83 (1217)
.-+||+.+.-|..+.++|.+.... .+.-.-|..... ...++.++.+|++++ ++++.+++++|+|||+||.
T Consensus 21 vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 21 VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL------DDYASAFQGHDVGFCCLGT 94 (242)
T ss_dssp EEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGG------GGGGGGGSSCSEEEECCCC
T ss_pred EEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCH------HHHHHHhcCCCEEEECCCc
Confidence 458999999999999999875430 222111211110 124688999999998 8888889999999999998
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccccc
Q psy13944 84 VKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLND 163 (1217)
Q Consensus 84 v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp 163 (1217)
.......+..+++|+.|+.+++++|++. ++++||++||.++++..
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~---------------------------------- 139 (242)
T 2bka_A 95 TRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS---------------------------------- 139 (242)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC----------------------------------
T ss_pred ccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCCC----------------------------------
Confidence 6544455678999999999999999884 67899999998875420
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHhcCCC-CEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee
Q psy13944 164 ILIKPMPNTYTLSKNACEQMVREKMDKL-PLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV 242 (1217)
Q Consensus 164 ~~~~~~PNtYa~SK~~AE~lv~~~~~gL-PvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~ 242 (1217)
++.|+.||+.+|++++.. ++ +++++||+.++|+...+. ....+....... .+...+ ..
T Consensus 140 ------~~~Y~~sK~~~e~~~~~~--~~~~~~~vrpg~v~~~~~~~~--------~~~~~~~~~~~~-~~~~~~----~~ 198 (242)
T 2bka_A 140 ------NFLYLQVKGEVEAKVEEL--KFDRYSVFRPGVLLCDRQESR--------PGEWLVRKFFGS-LPDSWA----SG 198 (242)
T ss_dssp ------SSHHHHHHHHHHHHHHTT--CCSEEEEEECCEEECTTGGGS--------HHHHHHHHHHCS-CCTTGG----GG
T ss_pred ------cchHHHHHHHHHHHHHhc--CCCCeEEEcCceecCCCCCCc--------HHHHHHHHhhcc-cCcccc----CC
Confidence 146999999999999875 56 599999999999864321 011122222221 111111 23
Q ss_pred ccccHHHHHHHHHHHHHhhhh
Q psy13944 243 DMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 243 D~VpVDdVvnAii~aa~~~~~ 263 (1217)
.+++++|+|++++.++.+...
T Consensus 199 ~~~~~~dva~~~~~~~~~~~~ 219 (242)
T 2bka_A 199 HSVPVVTVVRAMLNNVVRPRD 219 (242)
T ss_dssp TEEEHHHHHHHHHHHHTSCCC
T ss_pred cccCHHHHHHHHHHHHhCccc
Confidence 589999999999988875443
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.39 E-value=5e-13 Score=148.65 Aligned_cols=100 Identities=12% Similarity=-0.018 Sum_probs=74.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC-ccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED-VNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~-vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+++++.+|+++++ +++.++++ +|+|||+||... .......++|+.||.+++++|++. ++++|||+||++
T Consensus 41 ~~~~~~~~Dl~d~~------~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~ 111 (286)
T 3gpi_A 41 AGVQTLIADVTRPD------TLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTG 111 (286)
T ss_dssp TTCCEEECCTTCGG------GCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGG
T ss_pred cCCceEEccCCChH------HHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccE
Confidence 46889999999865 34555666 999999999743 445567889999999999999985 789999999999
Q ss_pred eecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHH
Q psy13944 628 SNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYII 686 (1217)
Q Consensus 628 v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~l 686 (1217)
+||... +++|.....| .+.|+.||+++|.+
T Consensus 112 vyg~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~ 143 (286)
T 3gpi_A 112 VYGQEVEEWLDEDTPPIA-----------------------------KDFSGKRMLEAEAL 143 (286)
T ss_dssp GCCCCCSSEECTTSCCCC-----------------------------CSHHHHHHHHHHHH
T ss_pred EEcCCCCCCCCCCCCCCC-----------------------------CChhhHHHHHHHHH
Confidence 998754 4555532222 24699999986666
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.2e-12 Score=135.35 Aligned_cols=184 Identities=12% Similarity=0.017 Sum_probs=129.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhc--Cccc-CCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKE--NANF-TERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~--~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
.-.||+.+.-|..+.++|.+.- ..+.-..|.. .+.. ..+++++.+|++++ +++..+++++|+|||+|+..
T Consensus 6 ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPSEGPRPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSCSSSCCCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCT
T ss_pred EEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeChhhcccccCCceEEEEecCCCH------HHHHHHHcCCCEEEECccCC
Confidence 4478898899999999998743 2222111211 1111 46799999999998 88999999999999999976
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
...+. .++|+.++.+++++|++. ++++||++||..+++.... .+.
T Consensus 79 ~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~-------~~~----------------------- 123 (206)
T 1hdo_A 79 NDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTK-------VPP----------------------- 123 (206)
T ss_dssp TCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTC-------SCG-----------------------
T ss_pred CCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCccc-------ccc-----------------------
Confidence 54222 248999999999999985 7889999999988764321 000
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc
Q psy13944 165 LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 165 ~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~ 244 (1217)
..+.|+.+|+.+|+++++ .+++++++||+.++.. +..+.... .+.+.+. .++
T Consensus 124 ----~~~~y~~~K~~~e~~~~~--~~i~~~~lrp~~~~~~---~~~~~~~~-----------------~~~~~~~--~~~ 175 (206)
T 1hdo_A 124 ----RLQAVTDDHIRMHKVLRE--SGLKYVAVMPPHIGDQ---PLTGAYTV-----------------TLDGRGP--SRV 175 (206)
T ss_dssp ----GGHHHHHHHHHHHHHHHH--TCSEEEEECCSEEECC---CCCSCCEE-----------------ESSSCSS--CSE
T ss_pred ----cchhHHHHHHHHHHHHHh--CCCCEEEEeCCcccCC---CCCcceEe-----------------cccCCCC--CCc
Confidence 114699999999999965 5799999999998322 11111000 0001111 489
Q ss_pred ccHHHHHHHHHHHHHhh
Q psy13944 245 VPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~~ 261 (1217)
++++|+|++++.++.++
T Consensus 176 i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 176 ISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp EEHHHHHHHHHHTTSCS
T ss_pred cCHHHHHHHHHHHhcCc
Confidence 99999999998877653
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=8.9e-12 Score=140.40 Aligned_cols=102 Identities=15% Similarity=0.180 Sum_probs=75.9
Q ss_pred cccCCCCCCCCHHHHHHHhc--CccEEEEcCccccc----hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 556 ADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKF----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 556 GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f----~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
+|+++ .++++.+++ ++|+|||+||.... .......+++|+.||.+++++|++. ++++|||+||.++|
T Consensus 39 ~D~~d------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vy 111 (321)
T 1e6u_A 39 LNLLD------SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIY 111 (321)
T ss_dssp CCTTC------HHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGS
T ss_pred CCccC------HHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHc
Confidence 67766 356777777 89999999997652 3455678899999999999999987 78999999999999
Q ss_pred cCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCC--ChhHHHHHHHHHHhhhh
Q psy13944 630 CNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMP--NTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 630 g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~p--NtYt~SK~lAE~lv~~y 690 (1217)
|... +++|..... ....| +.|+.||+.+|.++..|
T Consensus 112 g~~~~~~~~E~~~~~--------------------------~~~~p~~~~Y~~sK~~~E~~~~~~ 150 (321)
T 1e6u_A 112 PKLAKQPMAESELLQ--------------------------GTLEPTNEPYAIAKIAGIKLCESY 150 (321)
T ss_dssp CTTCCSSBCGGGTTS--------------------------SCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCcccccc--------------------------CCCCCCCCccHHHHHHHHHHHHHH
Confidence 8643 455542110 00112 36999999988888554
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-12 Score=148.76 Aligned_cols=120 Identities=16% Similarity=-0.021 Sum_probs=80.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccchh---cH---HHHHHHHHHHHHHHHHHHHhcCCC-cE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFDE---HF---QTAFEINCKGTEKLLKMAEEMKNL-DS 619 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~~---~~---~~~~~~NV~GT~nLLelA~~~~~l-k~ 619 (1217)
.+++++.||++++ ++++.++++ +|+|||+||...... .. ...+++|+.||.+|+++|++. +. ++
T Consensus 77 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~ 149 (404)
T 1i24_A 77 KSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECH 149 (404)
T ss_dssp CCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCE
T ss_pred CceEEEECCCCCH------HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcE
Confidence 4689999999974 467777776 999999999765322 22 247789999999999999987 55 59
Q ss_pred EEEEccceeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 620 FIYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 620 fV~vSTa~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|||+||+++||... +++|..++... ...+...+ ......+.|+.||+++|.++..|
T Consensus 150 ~V~~SS~~vyg~~~~~~~E~~~~~~~--------------~~~~~~~~-~~~~~~~~Y~~sK~~~e~~~~~~ 206 (404)
T 1i24_A 150 LVKLGTMGEYGTPNIDIEEGYITITH--------------NGRTDTLP-YPKQASSFYHLSKVHDSHNIAFT 206 (404)
T ss_dssp EEEECCGGGGCCCSSCBCSSEEEEEE--------------TTEEEEEE-CCCCCCSHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHhCCCCCCCCcccccccc--------------cccccccc-CCCCCCChhHHHHHHHHHHHHHH
Confidence 99999999998643 44443211000 00000000 01122357999999988888654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=9.2e-12 Score=144.58 Aligned_cols=108 Identities=19% Similarity=0.129 Sum_probs=82.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc----hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f----~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
.+++++.+|++++ ++++.+++++|+|||+||.... .......+++|+.||.+++++|++. ++++|||+|
T Consensus 72 ~~v~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~S 144 (379)
T 2c5a_A 72 FCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYAS 144 (379)
T ss_dssp TCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred CCceEEECCCCCH------HHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 3688999999984 4678888999999999997653 4556788999999999999999987 788999999
Q ss_pred cceeecCcc-------cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK-------KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~-------~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+++|+... +++|+... .....+.|+.||+.+|.+++.|
T Consensus 145 S~~v~~~~~~~~~~~~~~~E~~~~---------------------------~~~~~~~Y~~sK~~~E~~~~~~ 190 (379)
T 2c5a_A 145 SACIYPEFKQLETTNVSLKESDAW---------------------------PAEPQDAFGLEKLATEELCKHY 190 (379)
T ss_dssp EGGGSCGGGSSSSSSCEECGGGGS---------------------------SBCCSSHHHHHHHHHHHHHHHH
T ss_pred ehheeCCCCCCCccCCCcCcccCC---------------------------CCCCCChhHHHHHHHHHHHHHH
Confidence 999988532 12332100 0112357999999988888654
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.5e-12 Score=149.11 Aligned_cols=111 Identities=17% Similarity=0.173 Sum_probs=77.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.+|++++ ++++.+++++|+|||+||..... ......+++|+.||.+|+++|++.+++++|||+||
T Consensus 78 ~~v~~~~~Dl~d~------~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 78 PAVRFSETSITDD------ALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp TTEEEECSCTTCH------HHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CceEEEECCCCCH------HHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 4689999999984 46788888999999999987653 35567889999999999999987536889999999
Q ss_pred ceeecCcc--ccc--ccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIE--EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~--E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++||... +++ |.....| .....+.|+.||+.+|.++..|
T Consensus 152 ~~vyg~~~~~~~~~~E~~~~~~-------------------------~~~~~~~Y~~sK~~~E~~~~~~ 195 (377)
T 2q1s_A 152 GCSIAEKTFDDAKATEETDIVS-------------------------LHNNDSPYSMSKIFGEFYSVYY 195 (377)
T ss_dssp C--------------CCCCCCC-------------------------SSCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCcCccccccccc-------------------------ccCCCCchHHHHHHHHHHHHHH
Confidence 99998643 333 4321000 0011257999999988888554
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=6e-12 Score=140.72 Aligned_cols=100 Identities=20% Similarity=0.212 Sum_probs=76.8
Q ss_pred EEcccCCCCCCCCHHHHHHHhcC-----ccEEEEcCccccc-hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 554 LTADLQSDGLGLDEKAKEVLRED-----VNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 554 V~GDltd~~LGLs~~~~~~L~~~-----vdvVfH~AA~v~f-~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
+.+|++++ +.++.+.++ +|+|||+||.... .......+++|+.||.+++++|++. ++ +|||+||.+
T Consensus 47 ~~~d~~~~------~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~ 118 (310)
T 1eq2_A 47 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA 118 (310)
T ss_dssp CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG
T ss_pred eccccccH------HHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHH
Confidence 67888864 356777764 9999999997654 3456788999999999999999987 67 999999999
Q ss_pred eecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 628 SNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 628 v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+||... +++|.....| .+.|+.||+.+|.++..|
T Consensus 119 v~g~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~ 154 (310)
T 1eq2_A 119 TYGGRTSDFIESREYEKP-----------------------------LNVYGYSKFLFDEYVRQI 154 (310)
T ss_dssp GGTTCCSCBCSSGGGCCC-----------------------------SSHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHH
Confidence 998643 4455432111 246999999988888554
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.34 E-value=4.4e-12 Score=143.65 Aligned_cols=77 Identities=21% Similarity=0.289 Sum_probs=64.9
Q ss_pred CcEEEE-EcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 549 ERIVVL-TADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V-~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+++++ .+|+++++ +++.+++++|+|||+||...+.......+++|+.||.+++++|++..++++|||+||.+
T Consensus 61 ~~~~~~~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~ 134 (342)
T 1y1p_A 61 GRFETAVVEDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134 (342)
T ss_dssp TTEEEEECSCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred CceEEEEecCCcChH------HHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence 468888 89999865 35566778999999999887766777899999999999999998544688999999998
Q ss_pred eecC
Q psy13944 628 SNCN 631 (1217)
Q Consensus 628 v~g~ 631 (1217)
+++.
T Consensus 135 ~~~~ 138 (342)
T 1y1p_A 135 SALI 138 (342)
T ss_dssp GTCC
T ss_pred HhcC
Confidence 8753
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.7e-12 Score=141.91 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=80.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccc--hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKF--DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f--~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
+++++.+|++++ ++++.+++ ++|+|||+||.... .......+++|+.||.+++++|++. ++++|||+||
T Consensus 46 ~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS 118 (312)
T 2yy7_A 46 SGPFEVVNALDF------NQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSS 118 (312)
T ss_dssp SSCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEE
T ss_pred CCceEEecCCCH------HHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecc
Confidence 367889999984 46777776 89999999997653 2455678999999999999999986 7889999999
Q ss_pred ceeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.++|+... +++|..... ..+.|+.||+.+|.++..|
T Consensus 119 ~~~~~~~~~~~~~~e~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 157 (312)
T 2yy7_A 119 IAVFGPTTPKENTPQYTIME-----------------------------PSTVYGISKQAGERWCEYY 157 (312)
T ss_dssp GGGCCTTSCSSSBCSSCBCC-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCccccCcCC-----------------------------CCchhHHHHHHHHHHHHHH
Confidence 99998632 334432111 1256999999988888544
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-11 Score=138.40 Aligned_cols=105 Identities=21% Similarity=0.242 Sum_probs=79.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
+++++.+|++++ ++++.+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+|
T Consensus 44 ~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~S 116 (311)
T 2p5y_A 44 GVPFFRVDLRDK------EGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFAS 116 (311)
T ss_dssp TCCEECCCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred CeEEEECCCCCH------HHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeC
Confidence 567889999984 35666666 799999999976543 345578899999999999999986 688999999
Q ss_pred cc-eeecC-cc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TA-YSNCN-IK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta-~v~g~-~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|. .+||. .. +++|.....| .+.|+.||+.+|.++..|
T Consensus 117 S~~~~~g~~~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~ 157 (311)
T 2p5y_A 117 TGGAIYGEVPEGERAEETWPPRP-----------------------------KSPYAASKAAFEHYLSVY 157 (311)
T ss_dssp EHHHHHCCCCTTCCBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred CChhhcCCCCCCCCcCCCCCCCC-----------------------------CChHHHHHHHHHHHHHHH
Confidence 98 88875 21 4445422111 246999999988888554
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.6e-11 Score=137.82 Aligned_cols=107 Identities=18% Similarity=0.215 Sum_probs=79.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.++.++.+|++++ ++++.+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+
T Consensus 50 ~~~~~~~~Dl~~~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~ 122 (338)
T 1udb_A 50 KHPTFVEGDIRNE------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFS 122 (338)
T ss_dssp SCCEEEECCTTCH------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred CcceEEEccCCCH------HHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence 3578899999984 35666655 599999999976543 334567899999999999999987 68899999
Q ss_pred ccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+++||... +++|.... .+..+.|+.||+.+|.+++.|
T Consensus 123 SS~~~~g~~~~~~~~e~~~~----------------------------~~~~~~Y~~sK~~~e~~~~~~ 163 (338)
T 1udb_A 123 SSATVYGDNPKIPYVESFPT----------------------------GTPQSPYGKSKLMVEQILTDL 163 (338)
T ss_dssp EEGGGGCSCCSSSBCTTSCC----------------------------CCCSSHHHHHHHHHHHHHHHH
T ss_pred ccHHHhCCCCCCCcCcccCC----------------------------CCCCChHHHHHHHHHHHHHHH
Confidence 9999987533 34443211 111357999999999888654
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.33 E-value=4.8e-14 Score=162.93 Aligned_cols=91 Identities=14% Similarity=0.089 Sum_probs=73.5
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCc-EEEEEccceee
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLD-SFIYVSTAYSN 629 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk-~fV~vSTa~v~ 629 (1217)
++++.+|+. .++++++.+++++|+|||+||..+.. ......++|+.||.+|+++|++. +++ +|||+||++++
T Consensus 26 ~~v~~~d~~-----~d~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~ 98 (369)
T 3st7_A 26 HHIFEVHRQ-----TKEEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQAT 98 (369)
T ss_dssp CEEEECCTT-----CCHHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGG
T ss_pred CEEEEECCC-----CCHHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhc
Confidence 477888883 23568888889999999999987643 44456788999999999999987 566 99999999876
Q ss_pred cCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 630 CNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 630 g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ .+.|+.||+.+|.+++.|
T Consensus 99 ~------------------------------------------~~~Y~~sK~~~E~~~~~~ 117 (369)
T 3st7_A 99 Q------------------------------------------DNPYGESKLQGEQLLREY 117 (369)
T ss_dssp S------------------------------------------CSHHHHHHHHHHHHHHHH
T ss_pred C------------------------------------------CCCchHHHHHHHHHHHHH
Confidence 5 246999999988888554
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-11 Score=137.19 Aligned_cols=99 Identities=21% Similarity=0.226 Sum_probs=76.3
Q ss_pred EcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 555 TADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 555 ~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
.+|++++ +.+..+++ ++|+|||+||..... +.....+++|+.||.+++++|++. +. +|||+||+++|
T Consensus 39 ~~D~~d~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy 110 (287)
T 3sc6_A 39 LLDITNI------SQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVF 110 (287)
T ss_dssp TSCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGS
T ss_pred ccCCCCH------HHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhc
Confidence 3777764 46777766 699999999987654 356788999999999999999997 55 69999999999
Q ss_pred cCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 630 CNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 630 g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+... +++|+..+.| .+.|+.||+.+|.+++.|
T Consensus 111 ~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~ 144 (287)
T 3sc6_A 111 QGDRPEGYDEFHNPAP-----------------------------INIYGASKYAGEQFVKEL 144 (287)
T ss_dssp CCCCSSCBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCC-----------------------------CCHHHHHHHHHHHHHHHh
Confidence 8653 5566533222 246999999988888543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=9.5e-12 Score=155.24 Aligned_cols=113 Identities=12% Similarity=0.158 Sum_probs=82.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.||++++. +.++.+++++|+|||+||.... .......+++|+.||.+++++|++. + ++|||+||
T Consensus 360 ~~v~~v~~Dl~d~~-----~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS 432 (660)
T 1z7e_A 360 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPST 432 (660)
T ss_dssp TTEEEEECCTTTCH-----HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECC
T ss_pred CceEEEECCCCCcH-----HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEec
Confidence 46899999999853 2366667789999999997653 3456678899999999999999987 5 89999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.++||... +++|+....+.. + .....+.|+.||+++|.++..|
T Consensus 433 ~~vyg~~~~~~~~E~~~~~~~~--------------------p--~~~p~~~Y~~sK~~~E~~~~~~ 477 (660)
T 1z7e_A 433 SEVYGMCSDKYFDEDHSNLIVG--------------------P--VNKPRWIYSVSKQLLDRVIWAY 477 (660)
T ss_dssp GGGGBTCCSSSBCTTTCCEEEC--------------------C--TTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCcccCCCccccccC--------------------c--ccCCCCCcHHHHHHHHHHHHHH
Confidence 99988643 345543110000 0 0112246999999988888654
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-11 Score=136.10 Aligned_cols=99 Identities=19% Similarity=0.106 Sum_probs=75.2
Q ss_pred EEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 554 LTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 554 V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
+.+|++++ +++..++++ +|+|||+||..... ......+++|+.||.+++++|++. ++ +|||+||.++
T Consensus 36 ~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v 107 (299)
T 1n2s_A 36 FCGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYV 107 (299)
T ss_dssp SCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGG
T ss_pred ccccCCCH------HHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccE
Confidence 46888874 467777665 99999999976643 456678999999999999999986 55 7999999999
Q ss_pred ecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 629 NCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 629 ~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
|+... +++|..... ..+.|+.||+.+|.+++.
T Consensus 108 y~~~~~~~~~E~~~~~-----------------------------p~~~Y~~sK~~~E~~~~~ 141 (299)
T 1n2s_A 108 FPGTGDIPWQETDATS-----------------------------PLNVYGKTKLAGEKALQD 141 (299)
T ss_dssp SCCCTTCCBCTTSCCC-----------------------------CSSHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCCCCCCCCC-----------------------------CccHHHHHHHHHHHHHHH
Confidence 98643 444542211 124799999998888854
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-11 Score=140.62 Aligned_cols=100 Identities=20% Similarity=0.218 Sum_probs=76.5
Q ss_pred EEcccCCCCCCCCHHHHHHHhc-----CccEEEEcCccccc-hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 554 LTADLQSDGLGLDEKAKEVLRE-----DVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 554 V~GDltd~~LGLs~~~~~~L~~-----~vdvVfH~AA~v~f-~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
+.+|++++ +.++.+.+ ++|+|||+||.... .......+++|+.||.+++++|++. ++ +|||+||++
T Consensus 94 ~~~d~~~~------~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~ 165 (357)
T 2x6t_A 94 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA 165 (357)
T ss_dssp CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG
T ss_pred EeeecCcH------HHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchH
Confidence 67888874 35677766 59999999997654 3456788999999999999999987 67 999999999
Q ss_pred eecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 628 SNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 628 v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+|+... +++|+.... ..+.|+.||+.+|.++..|
T Consensus 166 v~g~~~~~~~~E~~~~~-----------------------------p~~~Y~~sK~~~E~~~~~~ 201 (357)
T 2x6t_A 166 TYGGRTSDFIESREYEK-----------------------------PLNVFGYSKFLFDEYVRQI 201 (357)
T ss_dssp GGCSCSSCCCSSGGGCC-----------------------------CSSHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCcCCcCCCC-----------------------------CCChhHHHHHHHHHHHHHH
Confidence 988643 445543211 1257999999988888554
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=3e-12 Score=143.73 Aligned_cols=225 Identities=13% Similarity=0.062 Sum_probs=151.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC---c--------ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN---A--------NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~---p--------~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDi 76 (1217)
.-+||+.+.-|..+.++|.+... .+.-..|... | ....+++++.||++++ +++..+++++|+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~l~~~~~~~d~ 79 (313)
T 1qyd_A 7 VLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH------QRLVDALKQVDV 79 (313)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCH------HHHHHHHTTCSE
T ss_pred EEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCH------HHHHHHHhCCCE
Confidence 55899999999999999987422 2211111100 0 0135789999999998 899999999999
Q ss_pred EEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcc
Q psy13944 77 VFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHT 156 (1217)
Q Consensus 77 ViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~ 156 (1217)
|||+|+..... .|+.++.+++++|++.+++++||+ |+ +|.... + . ..+
T Consensus 80 vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~--~-~-~~~---------------- 127 (313)
T 1qyd_A 80 VISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP-SE---FGMDPD--I-M-EHA---------------- 127 (313)
T ss_dssp EEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSCTT--S-C-CCC----------------
T ss_pred EEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe-cC---CcCCcc--c-c-ccC----------------
Confidence 99999976432 278899999999998633999986 32 332110 0 0 000
Q ss_pred cccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEee
Q psy13944 157 ELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQ 236 (1217)
Q Consensus 157 ~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g 236 (1217)
.....+.| .+|..+|+++++ .+++++++||+.++|.....+.... + .....+....+++
T Consensus 128 ---------~~p~~~~y-~sK~~~e~~~~~--~g~~~~ilrp~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~ 186 (313)
T 1qyd_A 128 ---------LQPGSITF-IDKRKVRRAIEA--ASIPYTYVSSNMFAGYFAGSLAQLD----G-----HMMPPRDKVLIYG 186 (313)
T ss_dssp ---------CSSTTHHH-HHHHHHHHHHHH--TTCCBCEEECCEEHHHHTTTSSCTT----C-----CSSCCSSEECCBT
T ss_pred ---------CCCCcchH-HHHHHHHHHHHh--cCCCeEEEEeceecccccccccccc----c-----cccCCCCeEEEeC
Confidence 00111358 999999999976 4799999999999885321111000 0 0001122223567
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc-CC-ccCchHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN-HG-NYDTTNHV 314 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~-sg-~~s~~el~ 314 (1217)
+++...++++++|++++++.++.++.. .++.|++. ++ .++..|++
T Consensus 187 ~g~~~~~~i~~~Dva~~~~~~l~~~~~---------------------------------~~~~~~~~g~~~~~s~~e~~ 233 (313)
T 1qyd_A 187 DGNVKGIWVDEDDVGTYTIKSIDDPQT---------------------------------LNKTMYIRPPMNILSQKEVI 233 (313)
T ss_dssp TSCSEEEEECHHHHHHHHHHHTTCGGG---------------------------------SSSEEECCCGGGEEEHHHHH
T ss_pred CCCceEEEEEHHHHHHHHHHHHhCccc---------------------------------CCceEEEeCCCCccCHHHHH
Confidence 788999999999999999988765433 14556655 44 78999999
Q ss_pred HHHHHhhchhh
Q psy13944 315 NYIKQNIKEKF 325 (1217)
Q Consensus 315 ~~ia~~~g~~~ 325 (1217)
+.+++.+|.+.
T Consensus 234 ~~~~~~~g~~~ 244 (313)
T 1qyd_A 234 QIWERLSEQNL 244 (313)
T ss_dssp HHHHHHHTCCC
T ss_pred HHHHHhcCCCC
Confidence 99999999763
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-11 Score=142.09 Aligned_cols=106 Identities=17% Similarity=0.188 Sum_probs=80.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCC---cEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNL---DSF 620 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~l---k~f 620 (1217)
.+++++.+|++++ +++..++++ +|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~i 127 (372)
T 1db3_A 55 PKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRF 127 (372)
T ss_dssp CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEE
T ss_pred CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEE
Confidence 4689999999984 456666664 69999999976533 345678899999999999999986 56 799
Q ss_pred EEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 621 IYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 621 V~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+||.++||... +++|.....| .+.|+.||+.+|.+++.|
T Consensus 128 v~~SS~~v~g~~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~ 170 (372)
T 1db3_A 128 YQASTSELYGLVQEIPQKETTPFYP-----------------------------RSPYAVAKLYAYWITVNY 170 (372)
T ss_dssp EEEEEGGGGTTCCSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred EEeCChhhhCCCCCCCCCccCCCCC-----------------------------CChHHHHHHHHHHHHHHH
Confidence 9999999998643 4444422111 246999999988888554
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.2e-11 Score=136.99 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=79.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccc--hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKF--DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f--~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
++.++.+|++++ +++..+++ ++|+|||+||.... .......+++|+.||.+++++|++. ++++|||+||
T Consensus 40 ~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS 112 (317)
T 3ajr_A 40 GIKFITLDVSNR------DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPST 112 (317)
T ss_dssp TCCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred CceEEEecCCCH------HHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecC
Confidence 356889999984 46777766 89999999997542 2455678899999999999999987 7899999999
Q ss_pred ceeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.++|+... +++|.... ...+.|+.||+.+|.++..|
T Consensus 113 ~~~~~~~~~~~~~~e~~~~-----------------------------~p~~~Y~~sK~~~e~~~~~~ 151 (317)
T 3ajr_A 113 IGVFGPETPKNKVPSITIT-----------------------------RPRTMFGVTKIAAELLGQYY 151 (317)
T ss_dssp GGGCCTTSCSSSBCSSSCC-----------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCccccccC-----------------------------CCCchHHHHHHHHHHHHHHH
Confidence 99998632 23333211 11357999999988888544
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.28 E-value=4e-12 Score=142.69 Aligned_cols=84 Identities=17% Similarity=0.185 Sum_probs=64.0
Q ss_pred CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc--cccccccCCCCChhHHH
Q psy13944 576 DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEME 650 (1217)
Q Consensus 576 ~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~ 650 (1217)
++|+|||+||..... ......++ |+.||.+++++|++. ++++|||+||.++|+... +++|.....|
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p------- 139 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADTLPTPEDSPLSP------- 139 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTTSCCCC-------
T ss_pred cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCCCCCCCCCCCCC-------
Confidence 789999999977642 22234566 999999999999998 689999999999998753 4555532221
Q ss_pred HHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 651 QIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 651 ~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+.|+.||+.+|.++..|
T Consensus 140 ----------------------~~~Y~~sK~~~E~~~~~~ 157 (321)
T 3vps_A 140 ----------------------RSPYAASKVGLEMVAGAH 157 (321)
T ss_dssp ----------------------CSHHHHHHHHHHHHHHHH
T ss_pred ----------------------CChhHHHHHHHHHHHHHH
Confidence 257999999988888554
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.9e-11 Score=136.53 Aligned_cols=107 Identities=21% Similarity=0.276 Sum_probs=81.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-cCccEEEEcCccccc--hhcHHHHHHHHHHHHHHHHHHHHhcC----CCcEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-EDVNIVFHVAATVKF--DEHFQTAFEINCKGTEKLLKMAEEMK----NLDSFI 621 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-~~vdvVfH~AA~v~f--~~~~~~~~~~NV~GT~nLLelA~~~~----~lk~fV 621 (1217)
.+++++.+|+++++ +++.++ .++|+|||+||.... .+.+...+++|+.||.+++++|++.. ++++||
T Consensus 64 ~~~~~~~~Dl~d~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv 137 (342)
T 2hrz_A 64 GAVDARAADLSAPG------EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVV 137 (342)
T ss_dssp SEEEEEECCTTSTT------HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred CceeEEEcCCCCHH------HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEE
Confidence 46899999999875 566666 489999999997642 24566788999999999999999863 278999
Q ss_pred EEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 622 YVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 622 ~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+||+++|+... +++|+.... ..+.|+.||+++|.++..|
T Consensus 138 ~~SS~~~~~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 179 (342)
T 2hrz_A 138 FTSSIAVFGAPLPYPIPDEFHTT-----------------------------PLTSYGTQKAICELLLSDY 179 (342)
T ss_dssp EEEEGGGCCSSCCSSBCTTCCCC-----------------------------CSSHHHHHHHHHHHHHHHH
T ss_pred EeCchHhhCCCCCCCcCCCCCCC-----------------------------CcchHHHHHHHHHHHHHHH
Confidence 999999998642 455543211 1246999999988888544
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=142.58 Aligned_cols=105 Identities=15% Similarity=0.113 Sum_probs=80.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCc-----E
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLD-----S 619 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk-----~ 619 (1217)
+++++.+|++++ +++..++++ +|+|||+||..... ......+++|+.||.+|+++|++. +++ +
T Consensus 84 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~ 156 (381)
T 1n7h_A 84 LMKLHYADLTDA------SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVK 156 (381)
T ss_dssp CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCE
T ss_pred ceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccE
Confidence 689999999984 456666664 69999999987653 445578899999999999999986 455 9
Q ss_pred EEEEccceeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 620 FIYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 620 fV~vSTa~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|||+||+++||... +++|..... ..+.|+.||+.+|.++..|
T Consensus 157 ~v~~SS~~vyg~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~E~~~~~~ 199 (381)
T 1n7h_A 157 YYQAGSSEMFGSTPPPQSETTPFH-----------------------------PRSPYAASKCAAHWYTVNY 199 (381)
T ss_dssp EEEEEEGGGGTTSCSSBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHhCCCCCCCCCCCCCC-----------------------------CCCchHHHHHHHHHHHHHH
Confidence 99999999998643 344442111 1257999999988888554
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=4.8e-11 Score=136.12 Aligned_cols=105 Identities=15% Similarity=0.222 Sum_probs=77.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.++.++.+|++++. ..++|+|||+||.... .......+++|+.||.+++++|++. +. +|||+||
T Consensus 75 ~~~~~~~~D~~~~~-----------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS 141 (343)
T 2b69_A 75 ENFELINHDVVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLAST 141 (343)
T ss_dssp TTEEEEECCTTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred CceEEEeCccCChh-----------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECc
Confidence 46899999999864 2579999999997653 3456678899999999999999987 45 8999999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++||... +++|..+... + + ....+.|+.||+.+|.++..|
T Consensus 142 ~~v~g~~~~~~~~E~~~~~~-~--------------------~---~~~~~~Y~~sK~~~E~~~~~~ 184 (343)
T 2b69_A 142 SEVYGDPEVHPQSEDYWGHV-N--------------------P---IGPRACYDEGKRVAETMCYAY 184 (343)
T ss_dssp GGGGBSCSSSSBCTTCCCBC-C--------------------S---SSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcccccccC-C--------------------C---CCCCCchHHHHHHHHHHHHHH
Confidence 99998643 4555532110 0 0 011246999999988888554
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.6e-11 Score=132.99 Aligned_cols=219 Identities=13% Similarity=0.102 Sum_probs=148.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhc----Cc--------c-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKE----NA--------N-FTERIVVLTADLQSDGLGLDEKEKKVLREDV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~----~p--------~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V 74 (1217)
.-+||+.+.-|..+.++|.+.... +.-..|.. .| . ...+++++.+|++++ +++..+++++
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~------~~l~~~~~~~ 77 (307)
T 2gas_A 5 ILILGPTGAIGRHIVWASIKAGNP-TYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDH------ETLVKAIKQV 77 (307)
T ss_dssp EEEESTTSTTHHHHHHHHHHHTCC-EEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCH------HHHHHHHTTC
T ss_pred EEEECCCchHHHHHHHHHHhCCCc-EEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCH------HHHHHHHhCC
Confidence 457899999999999999874322 21111111 00 0 124689999999998 8899999999
Q ss_pred cEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 75 NIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 75 DiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
|+|||+|+... +.++.+++++|++.+++++||+ |+ +|... +|.. +..|
T Consensus 78 d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~--~~~~---~~~p----------- 125 (307)
T 2gas_A 78 DIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV--DRHD---AVEP----------- 125 (307)
T ss_dssp SEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT--TSCC---CCTT-----------
T ss_pred CEEEECCcccc------------cccHHHHHHHHHhcCCceEEee-cc---cccCc--cccc---CCCc-----------
Confidence 99999999754 5678899999998644899984 32 33211 1100 0000
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i 234 (1217)
..+.| .+|+.+|+++++. +++++++||+.+++..... +.... .....+....+
T Consensus 126 --------------~~~~y-~sK~~~e~~~~~~--~i~~~~lrp~~~~~~~~~~---~~~~~-------~~~~~~~~~~~ 178 (307)
T 2gas_A 126 --------------VRQVF-EEKASIRRVIEAE--GVPYTYLCCHAFTGYFLRN---LAQLD-------ATDPPRDKVVI 178 (307)
T ss_dssp --------------HHHHH-HHHHHHHHHHHHH--TCCBEEEECCEETTTTGGG---TTCTT-------CSSCCSSEEEE
T ss_pred --------------chhHH-HHHHHHHHHHHHc--CCCeEEEEcceeecccccc---ccccc-------cccCCCCeEEE
Confidence 01369 9999999999764 7999999999998864211 11000 00011222345
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc-CC-ccCchH
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN-HG-NYDTTN 312 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~-sg-~~s~~e 312 (1217)
+++++...++++++|++++++.++..+.. .++.|++. ++ .++..|
T Consensus 179 ~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---------------------------------~~~~~~~~~~~~~~s~~e 225 (307)
T 2gas_A 179 LGDGNVKGAYVTEADVGTFTIRAANDPNT---------------------------------LNKAVHIRLPKNYLTQNE 225 (307)
T ss_dssp ETTSCSEEEEECHHHHHHHHHHHHTCGGG---------------------------------TTEEEECCCGGGEEEHHH
T ss_pred ecCCCcceEEeeHHHHHHHHHHHHcCccc---------------------------------cCceEEEeCCCCcCCHHH
Confidence 67788899999999999999988765432 14555554 44 789999
Q ss_pred HHHHHHHhhchhh
Q psy13944 313 HVNYIKQNIKEKF 325 (1217)
Q Consensus 313 l~~~ia~~~g~~~ 325 (1217)
+++.+++.+|.+.
T Consensus 226 ~~~~~~~~~g~~~ 238 (307)
T 2gas_A 226 VIALWEKKIGKTL 238 (307)
T ss_dssp HHHHHHHHHTSCC
T ss_pred HHHHHHHHhCCCC
Confidence 9999999998763
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-11 Score=138.58 Aligned_cols=219 Identities=10% Similarity=0.088 Sum_probs=148.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcC----c--------ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKEN----A--------NFTERIVVLTADLQSDGLGLDEKEKKVLREDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~----p--------~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VD 75 (1217)
.-++|+.+.-|..+.++|.+... .+.-..|... + ....+++++.||++++ +++..+++++|
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~------~~l~~~~~~~d 79 (308)
T 1qyc_A 7 ILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDH------ASLVEAVKNVD 79 (308)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCH------HHHHHHHHTCS
T ss_pred EEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCH------HHHHHHHcCCC
Confidence 45899999999999999987432 2211111110 0 0135789999999998 88999999999
Q ss_pred EEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCc
Q psy13944 76 IVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 76 iViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
+|||+|+... +.++.+++++|++.+++++||+ |+ +|.. .+|.. +..|
T Consensus 80 ~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~--~~~~~---~~~p------------ 126 (308)
T 1qyc_A 80 VVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND--VDNVH---AVEP------------ 126 (308)
T ss_dssp EEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC--TTSCC---CCTT------------
T ss_pred EEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-cc---cccC--ccccc---cCCc------------
Confidence 9999998643 5678899999998644899984 43 2311 11100 0000
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEe
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVY 235 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~ 235 (1217)
..+.| .+|+.+|+++++. +++++++||+.++|.....+.... .....+....++
T Consensus 127 -------------~~~~y-~sK~~~e~~~~~~--~~~~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 180 (308)
T 1qyc_A 127 -------------AKSVF-EVKAKVRRAIEAE--GIPYTYVSSNCFAGYFLRSLAQAG----------LTAPPRDKVVIL 180 (308)
T ss_dssp -------------HHHHH-HHHHHHHHHHHHH--TCCBEEEECCEEHHHHTTTTTCTT----------CSSCCSSEEEEE
T ss_pred -------------chhHH-HHHHHHHHHHHhc--CCCeEEEEeceecccccccccccc----------ccCCCCCceEEe
Confidence 01358 9999999999874 799999999999885332111000 000122233567
Q ss_pred eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc-CC-ccCchHH
Q psy13944 236 QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN-HG-NYDTTNH 313 (1217)
Q Consensus 236 g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~-sg-~~s~~el 313 (1217)
++++..+++++++|++++++.++.++.. .++.|++. ++ .++..|+
T Consensus 181 ~~~~~~~~~i~~~Dva~~~~~~l~~~~~---------------------------------~~~~~~~~g~~~~~s~~e~ 227 (308)
T 1qyc_A 181 GDGNARVVFVKEEDIGTFTIKAVDDPRT---------------------------------LNKTLYLRLPANTLSLNEL 227 (308)
T ss_dssp TTSCCEEEEECHHHHHHHHHTTSSCGGG---------------------------------TTEEEECCCGGGEEEHHHH
T ss_pred cCCCceEEEecHHHHHHHHHHHHhCccc---------------------------------cCeEEEEeCCCCccCHHHH
Confidence 7888999999999999998877654332 14566665 44 7899999
Q ss_pred HHHHHHhhchhh
Q psy13944 314 VNYIKQNIKEKF 325 (1217)
Q Consensus 314 ~~~ia~~~g~~~ 325 (1217)
++.+++.+|.+.
T Consensus 228 ~~~~~~~~g~~~ 239 (308)
T 1qyc_A 228 VALWEKKIDKTL 239 (308)
T ss_dssp HHHHHHHTTSCC
T ss_pred HHHHHHHhCCCC
Confidence 999999999763
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=6.9e-11 Score=148.29 Aligned_cols=106 Identities=23% Similarity=0.223 Sum_probs=80.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.+|++++ ++++.+++ ++|+|||+||..... ......+++|+.||.+|+++|++. ++++|||+
T Consensus 61 ~~v~~v~~Dl~d~------~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~ 133 (699)
T 1z45_A 61 HHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFS 133 (699)
T ss_dssp SCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence 4688999999985 36777766 799999999976643 334568899999999999999987 68899999
Q ss_pred ccceeecCcc------cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK------KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~------~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+++||... +++|.... ...+.|+.||+++|.+++.+
T Consensus 134 SS~~vyg~~~~~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~ 177 (699)
T 1z45_A 134 SSATVYGDATRFPNMIPIPEECPL-----------------------------GPTNPYGHTKYAIENILNDL 177 (699)
T ss_dssp EEGGGGCCGGGSTTCCSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred CcHHHhCCCccccccCCccccCCC-----------------------------CCCChHHHHHHHHHHHHHHH
Confidence 9999988632 22332110 11257999999998888654
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.7e-11 Score=137.29 Aligned_cols=106 Identities=17% Similarity=0.122 Sum_probs=80.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNL-DSFIY 622 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~l-k~fV~ 622 (1217)
.+++++.+|++|+ +++..++++ +|+|||+||..... +.....+++|+.||.+++++|+++ ++ ++|||
T Consensus 52 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~ 124 (345)
T 2z1m_A 52 NDVKIIHMDLLEF------SNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQ 124 (345)
T ss_dssp TTEEECCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEE
T ss_pred CceeEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 4689999999984 456666664 69999999976542 456678899999999999999987 55 79999
Q ss_pred EccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 623 VSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 623 vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+||.++||... +++|..... ..+.|+.||+.+|.+++.|
T Consensus 125 ~SS~~vyg~~~~~~~~e~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 165 (345)
T 2z1m_A 125 ASTSEMFGKVQEIPQTEKTPFY-----------------------------PRSPYAVAKLFGHWITVNY 165 (345)
T ss_dssp EEEGGGGCSCSSSSBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred EechhhcCCCCCCCCCccCCCC-----------------------------CCChhHHHHHHHHHHHHHH
Confidence 99999998643 344432111 1246999999988888554
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2.9e-11 Score=136.03 Aligned_cols=100 Identities=20% Similarity=0.186 Sum_probs=55.7
Q ss_pred EEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 553 VLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 553 ~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
++.+|+++++ ++..+++ ++|+|||+||..... ......+++|+.||.+++++|++. +. +|||+||.+
T Consensus 41 ~~~~Dl~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~ 112 (315)
T 2ydy_A 41 FEQVNLLDSN------AVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDY 112 (315)
T ss_dssp -----------------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGG
T ss_pred eEEecCCCHH------HHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHH
Confidence 6779999864 3455555 489999999976543 345578899999999999999987 45 899999999
Q ss_pred eecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 628 SNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 628 v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+|+... +++|..... ..+.|+.||+.+|.+++.
T Consensus 113 v~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~ 146 (315)
T 2ydy_A 113 VFDGTNPPYREEDIPA-----------------------------PLNLYGKTKLDGEKAVLE 146 (315)
T ss_dssp GSCSSSCSBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCCCC-----------------------------CcCHHHHHHHHHHHHHHH
Confidence 988632 455543211 135799999998888844
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-10 Score=127.48 Aligned_cols=97 Identities=22% Similarity=0.193 Sum_probs=74.2
Q ss_pred cccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeec
Q psy13944 556 ADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNC 630 (1217)
Q Consensus 556 GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g 630 (1217)
+|+++ .++++.+++ ++|+|||+||..... ......+++|+.||.+++++|++. +. +|||+||.++|+
T Consensus 47 ~Dl~d------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~ 118 (292)
T 1vl0_A 47 LDITN------VLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFD 118 (292)
T ss_dssp CCTTC------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSC
T ss_pred CCCCC------HHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeEC
Confidence 67766 346777776 799999999987643 455678999999999999999987 56 999999999998
Q ss_pred Ccc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 631 NIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 631 ~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
... +++|..... ..+.|+.||+.+|.+++.
T Consensus 119 ~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~E~~~~~ 150 (292)
T 1vl0_A 119 GEAKEPITEFDEVN-----------------------------PQSAYGKTKLEGENFVKA 150 (292)
T ss_dssp SCCSSCBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCC-----------------------------CccHHHHHHHHHHHHHHh
Confidence 643 455543211 124799999998888854
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.7e-11 Score=138.29 Aligned_cols=216 Identities=13% Similarity=0.064 Sum_probs=148.1
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcc-------cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEE
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENAN-------FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFH 79 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~-------~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH 79 (1217)
+.-+||+.+.-|..+.++|.+... .+.-..|..... ...+++++.||++++ +++..+++++|+|||
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~------~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEH------EKLVELMKKVDVVIS 85 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCH------HHHHHHHTTCSEEEE
T ss_pred eEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCCchhhHHHHhhcCCCEEEEecCCCH------HHHHHHHcCCCEEEE
Confidence 356899999999999999987432 222111111100 124689999999998 899999999999999
Q ss_pred cCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 80 VAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 80 ~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
+|+... +.++.+++++|++.+++++||+ |+ +|... +|. .+..|.
T Consensus 86 ~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~--~~~---~~~~p~--------------- 129 (318)
T 2r6j_A 86 ALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE--DRI---NALPPF--------------- 129 (318)
T ss_dssp CCCGGG------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT--TTC---CCCHHH---------------
T ss_pred CCchhh------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc--ccc---cCCCCc---------------
Confidence 998642 5678999999998644899985 43 33211 110 000000
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCC
Q psy13944 160 VLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTS 239 (1217)
Q Consensus 160 ~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~ 239 (1217)
.+.| .+|..+|+++++ .+++++++||+.+++.. . ..++.....+....++++++
T Consensus 130 ----------~~~y-~sK~~~e~~~~~--~~~~~~~lr~~~~~~~~-------~------~~~~~~~~~~~~~~~~~~~~ 183 (318)
T 2r6j_A 130 ----------EALI-ERKRMIRRAIEE--ANIPYTYVSANCFASYF-------I------NYLLRPYDPKDEITVYGTGE 183 (318)
T ss_dssp ----------HHHH-HHHHHHHHHHHH--TTCCBEEEECCEEHHHH-------H------HHHHCTTCCCSEEEEETTSC
T ss_pred ----------chhH-HHHHHHHHHHHh--cCCCeEEEEcceehhhh-------h------hhhccccCCCCceEEecCCC
Confidence 0358 999999999976 47999999999877631 0 11111112233345677888
Q ss_pred ceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc-CC-ccCchHHHHHH
Q psy13944 240 NIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN-HG-NYDTTNHVNYI 317 (1217)
Q Consensus 240 ~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~-sg-~~s~~el~~~i 317 (1217)
...++++++|++++++.++.++.. .++.|++. ++ .++..|+++.+
T Consensus 184 ~~~~~i~~~Dva~~~~~~l~~~~~---------------------------------~~~~~~~~g~~~~~s~~e~~~~~ 230 (318)
T 2r6j_A 184 AKFAMNYEQDIGLYTIKVATDPRA---------------------------------LNRVVIYRPSTNIITQLELISRW 230 (318)
T ss_dssp CEEEEECHHHHHHHHHHHTTCGGG---------------------------------TTEEEECCCGGGEEEHHHHHHHH
T ss_pred ceeeEeeHHHHHHHHHHHhcCccc---------------------------------cCeEEEecCCCCccCHHHHHHHH
Confidence 999999999999999887765332 14556654 45 78999999999
Q ss_pred HHhhchh
Q psy13944 318 KQNIKEK 324 (1217)
Q Consensus 318 a~~~g~~ 324 (1217)
++.+|.+
T Consensus 231 ~~~~g~~ 237 (318)
T 2r6j_A 231 EKKIGKK 237 (318)
T ss_dssp HHHHTCC
T ss_pred HHHhCCC
Confidence 9999876
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=7.8e-11 Score=130.26 Aligned_cols=105 Identities=12% Similarity=0.135 Sum_probs=83.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.+|++++ ++++.+++++|+|||+||.. ...+++..+++|+.||.+++++|++. +.++|||+||..+
T Consensus 43 ~~~~~~~~Dl~d~------~~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~ 114 (267)
T 3rft_A 43 PNEECVQCDLADA------NAVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHT 114 (267)
T ss_dssp TTEEEEECCTTCH------HHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGG
T ss_pred CCCEEEEcCCCCH------HHHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHH
Confidence 4689999999974 57888889999999999974 45677889999999999999999987 6889999999988
Q ss_pred ecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 629 NCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 629 ~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++... +++|+.... ..+.|+.||+.+|.+++.|
T Consensus 115 ~g~~~~~~~~~e~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~ 150 (267)
T 3rft_A 115 IGYYPQTERLGPDVPAR-----------------------------PDGLYGVSKCFGENLARMY 150 (267)
T ss_dssp GTTSBTTSCBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCCCCCCCCC-----------------------------CCChHHHHHHHHHHHHHHH
Confidence 86432 344443211 1246999999988888554
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.4e-12 Score=137.75 Aligned_cols=215 Identities=11% Similarity=-0.021 Sum_probs=132.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----CccEEEEcCccC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE----DVNIVFHVAATV 84 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----~VDiViH~AA~v 84 (1217)
-+||+.+.-|..+.++|.+... .+.-.-|. +...+. .+.+|++++ ++++.+++ ++|+|||+||..
T Consensus 5 lVtGasg~iG~~l~~~L~~~g~-~V~~~~r~--~~~~~~--~~~~D~~~~------~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 5 AITGSASGIGAALKELLARAGH-TVIGIDRG--QADIEA--DLSTPGGRE------TAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp EEETTTSHHHHHHHHHHHHTTC-EEEEEESS--SSSEEC--CTTSHHHHH------HHHHHHHHHHTTCCSEEEECCCCC
T ss_pred EEeCCCcHHHHHHHHHHHhCCC-EEEEEeCC--hhHccc--cccCCcccH------HHHHHHHHHcCCCccEEEECCCCC
Confidence 4789999999999999987422 22211111 111111 156788876 67776664 899999999987
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
....+++..+++|+.|+.+++++|.+. .+..++|++||..+++..... . + ..+.....+++.....
T Consensus 74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------~---~--~~~~~~~~~~~~~~~~ 142 (255)
T 2dkn_A 74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAE------L---P--MVEAMLAGDEARAIEL 142 (255)
T ss_dssp TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGG------C---H--HHHHHHHTCHHHHHHH
T ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccc------c---c--hhhhhcccchhhhhhh
Confidence 655678889999999999999988653 245799999999887643210 0 0 0000001111110000
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEee
Q psy13944 162 NDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQ 236 (1217)
Q Consensus 162 tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g 236 (1217)
... .....+.|+.||+.+|.+++.++ .+++++++||+.|+|+.... +.... ........ + .
T Consensus 143 ~~~-~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~---~~~~~-----~~~~~~~~----~-~ 208 (255)
T 2dkn_A 143 AEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA---SKADP-----RYGESTRR----F-V 208 (255)
T ss_dssp HHH-HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH---HHHCT-----TTHHHHHS----C-C
T ss_pred ccc-cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh---cccch-----hhHHHHHH----H-H
Confidence 000 00111469999999999998764 58999999999999873211 00000 00000110 0 0
Q ss_pred CCCceeccccHHHHHHHHHHHHHhh
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
+ ...++++++|+|++++.++...
T Consensus 209 -~-~~~~~~~~~dva~~~~~l~~~~ 231 (255)
T 2dkn_A 209 -A-PLGRGSEPREVAEAIAFLLGPQ 231 (255)
T ss_dssp -C-TTSSCBCHHHHHHHHHHHHSGG
T ss_pred -H-HhcCCCCHHHHHHHHHHHhCCC
Confidence 1 3457999999999999887654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=4.8e-11 Score=131.90 Aligned_cols=225 Identities=14% Similarity=0.116 Sum_probs=152.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|..+.++|.+..... + .+.+.++.. ...++.++.+|++++ ++++.+++
T Consensus 19 vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 19 AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG-SPDVISFVHCDVTKD------EDVRNLVDTTIAKHG 91 (278)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-CTTTEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC-CCCceEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 4478999999999999998742211 0 111111111 113789999999998 77777665
Q ss_pred CccEEEEcCccCCc-----c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKF-----D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-----~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
++|+|||+||.... . +.++..+++|+.|+.++++++... .+..++|++||..++....
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------- 161 (278)
T 2bgk_A 92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------- 161 (278)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------
T ss_pred CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------
Confidence 78999999997532 1 235578999999999999988753 2456999999987654310
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
.....|+.||+..|.+++.++ .++++.++||+.|+++......+ .
T Consensus 162 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~ 211 (278)
T 2bgk_A 162 ---------------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG---V 211 (278)
T ss_dssp ---------------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS---C
T ss_pred ---------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcc---c
Confidence 011369999999999987764 58999999999999986432211 0
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIK 295 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~ 295 (1217)
.......+..+ .+.....+++++|+|++++.++..... .
T Consensus 212 ---~~~~~~~~~~~-------~~~~~~~~~~~~dva~~~~~l~~~~~~----~--------------------------- 250 (278)
T 2bgk_A 212 ---DSSRVEELAHQ-------AANLKGTLLRAEDVADAVAYLAGDESK----Y--------------------------- 250 (278)
T ss_dssp ---CHHHHHHHHHH-------TCSSCSCCCCHHHHHHHHHHHHSGGGT----T---------------------------
T ss_pred ---chhHHHHhhhc-------ccccccccCCHHHHHHHHHHHcCcccc----c---------------------------
Confidence 01111111111 011234689999999999887754332 0
Q ss_pred hccceeeccCC-ccCchHHHHHHHHh
Q psy13944 296 KLDVNYEINHG-NYDTTNHVNYIKQN 320 (1217)
Q Consensus 296 ~~g~~YnI~sg-~~s~~el~~~ia~~ 320 (1217)
..|+.|++.+| ..+..|+++.+++.
T Consensus 251 ~~G~~~~v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 251 VSGLNLVIDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp CCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred CCCCEEEECCcccccCCccchhhhhh
Confidence 13788999988 88888998877654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-10 Score=132.73 Aligned_cols=75 Identities=17% Similarity=0.111 Sum_probs=62.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch--hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~--~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
.+++++.+|++++ ++++.+++ ++|+|||+||..... +.+ . +++|+.||.+++++|++. ++++|||+|
T Consensus 65 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~-~~~~iV~~S 135 (330)
T 2pzm_A 65 AGLSVIEGSVTDA------GLLERAFDSFKPTHVVHSAAAYKDPDDWAE-D-AATNVQGSINVAKAASKA-GVKRLLNFQ 135 (330)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred CCceEEEeeCCCH------HHHHHHHhhcCCCEEEECCccCCCccccCh-h-HHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence 4689999999984 46777777 899999999976542 223 2 899999999999999987 688999999
Q ss_pred cceeecCc
Q psy13944 625 TAYSNCNI 632 (1217)
Q Consensus 625 Ta~v~g~~ 632 (1217)
|.++++..
T Consensus 136 S~~~~~~~ 143 (330)
T 2pzm_A 136 TALCYGRP 143 (330)
T ss_dssp EGGGGCSC
T ss_pred CHHHhCCC
Confidence 99998763
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=129.56 Aligned_cols=90 Identities=9% Similarity=-0.147 Sum_probs=67.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEccce
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~-~~lk~fV~vSTa~ 627 (1217)
.+++++.+|+++.+ ..++|+|||+||......+ .+.+++++|++. .++++|||+||++
T Consensus 47 ~~~~~~~~D~~d~~-----------~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~ 105 (286)
T 3ius_A 47 SGAEPLLWPGEEPS-----------LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTA 105 (286)
T ss_dssp TTEEEEESSSSCCC-----------CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred CCCeEEEecccccc-----------cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecce
Confidence 46899999999832 5789999999997665422 357899999884 3789999999999
Q ss_pred eecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 628 SNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 628 v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
+||... +++|+....| .+.|+.||+.+|.+++
T Consensus 106 vyg~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~ 139 (286)
T 3ius_A 106 VYGDHDGAWVDETTPLTP-----------------------------TAARGRWRVMAEQQWQ 139 (286)
T ss_dssp GGCCCTTCEECTTSCCCC-----------------------------CSHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCcCCCCCCCC-----------------------------CCHHHHHHHHHHHHHH
Confidence 998754 4555532222 2469999999888874
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.17 E-value=3.7e-11 Score=135.66 Aligned_cols=215 Identities=8% Similarity=0.018 Sum_probs=147.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhc-C---c--------ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKE-N---A--------NFTERIVVLTADLQSDGLGLDEKEKKVLREDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~-~---p--------~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VD 75 (1217)
.-+||+.+.-|..+.++|.+... .+.-..|.. . + ....+++++.+|++++ +++..+++++|
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~------~~l~~a~~~~d 79 (321)
T 3c1o_A 7 IIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH------EKMVSVLKQVD 79 (321)
T ss_dssp EEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCH------HHHHHHHTTCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCH------HHHHHHHcCCC
Confidence 45789999999999999987422 221111111 0 0 0125789999999998 89999999999
Q ss_pred EEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCc
Q psy13944 76 IVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 76 iViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
+|||+|+... +.++.+++++|++.+++++||+ | . +|... +|.. +..|
T Consensus 80 ~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S-~--~g~~~--~~~~---~~~p------------ 126 (321)
T 3c1o_A 80 IVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP-S-D--FGCEE--DRIK---PLPP------------ 126 (321)
T ss_dssp EEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC-S-C--CSSCG--GGCC---CCHH------------
T ss_pred EEEECCCccc------------hhhHHHHHHHHHHhCCccEEec-c-c--cccCc--cccc---cCCC------------
Confidence 9999999643 6678999999998633899983 3 2 33211 1110 0000
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHH---HHhcCcee
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV---AVGLGIMR 232 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~---~~~~G~l~ 232 (1217)
..+.| .+|+.+|+++++. +++++++||+.+++... ..+.. ....+...
T Consensus 127 -------------~~~~y-~sK~~~e~~~~~~--~~~~~~lrp~~~~~~~~-------------~~~~~~~~~~~~~~~~ 177 (321)
T 3c1o_A 127 -------------FESVL-EKKRIIRRAIEAA--ALPYTYVSANCFGAYFV-------------NYLLHPSPHPNRNDDI 177 (321)
T ss_dssp -------------HHHHH-HHHHHHHHHHHHH--TCCBEEEECCEEHHHHH-------------HHHHCCCSSCCTTSCE
T ss_pred -------------cchHH-HHHHHHHHHHHHc--CCCeEEEEeceeccccc-------------cccccccccccccCce
Confidence 01359 9999999999764 79999999999887421 01110 00122233
Q ss_pred EEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeecc-CC-ccCc
Q psy13944 233 TVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEIN-HG-NYDT 310 (1217)
Q Consensus 233 ~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~-sg-~~s~ 310 (1217)
.++++++...++++++|++++++.++.++.. .++.|++. ++ .++.
T Consensus 178 ~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---------------------------------~g~~~~~~g~~~~~t~ 224 (321)
T 3c1o_A 178 VIYGTGETKFVLNYEEDIAKYTIKVACDPRC---------------------------------CNRIVIYRPPKNIISQ 224 (321)
T ss_dssp EEETTSCCEEEEECHHHHHHHHHHHHHCGGG---------------------------------TTEEEECCCGGGEEEH
T ss_pred EEecCCCcceeEeeHHHHHHHHHHHHhCccc---------------------------------cCeEEEEeCCCCcccH
Confidence 4567888999999999999999988875433 14566665 34 7899
Q ss_pred hHHHHHHHHhhchh
Q psy13944 311 TNHVNYIKQNIKEK 324 (1217)
Q Consensus 311 ~el~~~ia~~~g~~ 324 (1217)
.|+++.+.+.+|.+
T Consensus 225 ~e~~~~~~~~~g~~ 238 (321)
T 3c1o_A 225 NELISLWEAKSGLS 238 (321)
T ss_dssp HHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHcCCc
Confidence 99999999999876
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-10 Score=128.86 Aligned_cols=227 Identities=14% Similarity=0.090 Sum_probs=143.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHH----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFD----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|..+.++|.+..... +.+ .+.+.......++.++.+|++++ ++++.+++ ++|
T Consensus 8 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 8 WLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDG------ERIDVVAADVLARYGRVD 81 (281)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCS
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCH------HHHHHHHHHHHHhCCCCC
Confidence 4489999999999999998743221 111 11111112345799999999998 77776665 789
Q ss_pred EEEEcCccCCc----c---cCHHHHHHHHHHH----HHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKF----D---EHFQTAFEINCKG----TEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f----~---e~l~~a~~vNV~G----T~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+||.... + +.++..+++|+.| ++.++..+++. +..++|++||...+... +
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~----------~---- 146 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISSFGGQLSF----------A---- 146 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCC----------T----
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcCccccCCC----------C----
Confidence 99999997532 1 2345789999999 55555555553 56799999997653210 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc-ccccch
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW-VKGMNG 218 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW-idn~~g 218 (1217)
..+.|+.||+..|.+.+.++ .++++.++||+.|.++...+.... ......
T Consensus 147 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 202 (281)
T 3m1a_A 147 ------------------------GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPA 202 (281)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTT
T ss_pred ------------------------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchh
Confidence 01469999999999987654 589999999999988764432211 111111
Q ss_pred hHHH---HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhh
Q psy13944 219 LTAM---YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIK 295 (1217)
Q Consensus 219 ~~~l---i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~ 295 (1217)
.... ...... ......+++++|+|++++.++.....
T Consensus 203 ~~~~~~~~~~~~~---------~~~~~~~~~~~dva~a~~~~~~~~~~-------------------------------- 241 (281)
T 3m1a_A 203 YAEKVGPTRQLVQ---------GSDGSQPGDPAKAAAAIRLALDTEKT-------------------------------- 241 (281)
T ss_dssp THHHHHHHHHHHH---------C-----CBCHHHHHHHHHHHHHSSSC--------------------------------
T ss_pred hHHHhHHHHHHHh---------hccCCCCCCHHHHHHHHHHHHhCCCC--------------------------------
Confidence 0111 111111 12234577899999999988875433
Q ss_pred hccceeeccCC-ccCchHHHHHHHHhhc
Q psy13944 296 KLDVNYEINHG-NYDTTNHVNYIKQNIK 322 (1217)
Q Consensus 296 ~~g~~YnI~sg-~~s~~el~~~ia~~~g 322 (1217)
+..|+++++ .....+....+.+.++
T Consensus 242 --~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 242 --PLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp --CSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred --CeEEecCchHHHHHHHHHHHHHHHHH
Confidence 567888887 4444555555555443
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.5e-11 Score=128.00 Aligned_cols=73 Identities=15% Similarity=0.080 Sum_probs=58.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.+|++++ ++++.+++++|+|||+|+... .....+++|+.|+.+++++|++. ++++|||+||+.+
T Consensus 46 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~---~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~ 115 (227)
T 3dhn_A 46 EHLKVKKADVSSL------DEVCEVCKGADAVISAFNPGW---NNPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGS 115 (227)
T ss_dssp TTEEEECCCTTCH------HHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTT
T ss_pred CceEEEEecCCCH------HHHHHHhcCCCEEEEeCcCCC---CChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhh
Confidence 5689999999974 578888899999999998642 11236788999999999999997 7899999999876
Q ss_pred ecC
Q psy13944 629 NCN 631 (1217)
Q Consensus 629 ~g~ 631 (1217)
++.
T Consensus 116 ~~~ 118 (227)
T 3dhn_A 116 LFI 118 (227)
T ss_dssp SEE
T ss_pred ccC
Confidence 644
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.7e-10 Score=123.96 Aligned_cols=97 Identities=20% Similarity=0.184 Sum_probs=73.9
Q ss_pred EEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 554 LTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 554 V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
+.+|++++ ++++.++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. +. +|||+||.++
T Consensus 39 ~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~ 110 (273)
T 2ggs_A 39 YKLDLTDF------PRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYV 110 (273)
T ss_dssp EECCTTSH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGG
T ss_pred ceeccCCH------HHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEeccee
Confidence 78999874 467777665 99999999987653 456678999999999999999986 45 8999999998
Q ss_pred ecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 629 NCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 629 ~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
++... ++.|...+. ..+.|+.||+.+|.++
T Consensus 111 ~~~~~~~~~e~~~~~-----------------------------~~~~Y~~sK~~~e~~~ 141 (273)
T 2ggs_A 111 FDGEKGNYKEEDIPN-----------------------------PINYYGLSKLLGETFA 141 (273)
T ss_dssp SCSSSCSBCTTSCCC-----------------------------CSSHHHHHHHHHHHHH
T ss_pred EcCCCCCcCCCCCCC-----------------------------CCCHHHHHHHHHHHHH
Confidence 87543 444442111 1257999999977766
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.9e-10 Score=130.98 Aligned_cols=73 Identities=22% Similarity=0.276 Sum_probs=60.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch--hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~--~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
.+++++.+|++++ ++++.++++ +|+|||+||..... ... . +++|+.||.+++++|++. ++++|||+|
T Consensus 66 ~~~~~~~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~-~~~~iV~~S 136 (333)
T 2q1w_A 66 PNLTFVEGSIADH------ALVNQLIGDLQPDAVVHTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKN-NVGRFVYFQ 136 (333)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred CCceEEEEeCCCH------HHHHHHHhccCCcEEEECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHh-CCCEEEEEC
Confidence 4689999999985 467777777 99999999976652 222 2 889999999999999986 788999999
Q ss_pred cceeec
Q psy13944 625 TAYSNC 630 (1217)
Q Consensus 625 Ta~v~g 630 (1217)
|+++|+
T Consensus 137 S~~~~g 142 (333)
T 2q1w_A 137 TALCYG 142 (333)
T ss_dssp EGGGGC
T ss_pred cHHHhC
Confidence 999987
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.14 E-value=8.4e-11 Score=132.32 Aligned_cols=75 Identities=23% Similarity=0.321 Sum_probs=58.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhc--HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEH--FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~--~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
.+++++.||+++++ +++.+++++|+|||+|+.+.+... .+..+++|+.||.+++++|++..++++|||+||+
T Consensus 53 ~~~~~~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~ 126 (322)
T 2p4h_X 53 EKLHFFNADLSNPD------SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSG 126 (322)
T ss_dssp HHEEECCCCTTCGG------GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEG
T ss_pred CceEEEecCCCCHH------HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccH
Confidence 36889999999864 577788899999999987644321 2358899999999999999986458899999998
Q ss_pred eee
Q psy13944 627 YSN 629 (1217)
Q Consensus 627 ~v~ 629 (1217)
+++
T Consensus 127 ~~~ 129 (322)
T 2p4h_X 127 SAV 129 (322)
T ss_dssp GGT
T ss_pred HHc
Confidence 643
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=5.1e-10 Score=128.08 Aligned_cols=76 Identities=21% Similarity=0.167 Sum_probs=63.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC---ccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCcEEE---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED---VNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFI--- 621 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~---vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~-~~lk~fV--- 621 (1217)
.+++++.+|++++ +++..++++ +|+|||+||... .......++|+.||.+++++|++. +++++||
T Consensus 48 ~~~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~ 119 (364)
T 2v6g_A 48 NPINYVQCDISDP------DDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQT 119 (364)
T ss_dssp SCCEEEECCTTSH------HHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEEC
T ss_pred CceEEEEeecCCH------HHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEecc
Confidence 4688999999974 467777777 999999999764 456778899999999999999975 2688998
Q ss_pred ----EEccceeecCc
Q psy13944 622 ----YVSTAYSNCNI 632 (1217)
Q Consensus 622 ----~vSTa~v~g~~ 632 (1217)
|+||.++||..
T Consensus 120 g~~i~~Ss~~vyg~~ 134 (364)
T 2v6g_A 120 GRKHYMGPFESYGKI 134 (364)
T ss_dssp CTHHHHCCGGGTTTS
T ss_pred CceEEEechhhcccc
Confidence 89999998864
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=6.7e-10 Score=127.63 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=76.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.++.++.||++|+ +.+..+++++|+|||+||.... .......+++|+.||.+++++|++. ++++||++||
T Consensus 70 ~~v~~~~~Dl~d~------~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS 142 (344)
T 2gn4_A 70 PRMRFFIGDVRDL------ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALST 142 (344)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECC
T ss_pred CCEEEEECCCCCH------HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecC
Confidence 4799999999984 4678888999999999997653 2344578999999999999999997 7899999999
Q ss_pred ceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
..++. | .+.|+.||+++|.++.++
T Consensus 143 ~~~~~------------p-----------------------------~~~Y~~sK~~~E~~~~~~ 166 (344)
T 2gn4_A 143 DKAAN------------P-----------------------------INLYGATKLCSDKLFVSA 166 (344)
T ss_dssp GGGSS------------C-----------------------------CSHHHHHHHHHHHHHHHG
T ss_pred CccCC------------C-----------------------------ccHHHHHHHHHHHHHHHH
Confidence 64321 1 146999999998888654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.1e-10 Score=125.05 Aligned_cols=192 Identities=15% Similarity=0.110 Sum_probs=129.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|..+.++|.+..... + .+.+.++......++.++.+|++++ ++++.+++
T Consensus 14 vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 14 AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE------QELSALADFAISKLG 87 (255)
T ss_dssp EEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCH------HHHHHHHHHHHHhcC
Confidence 3478999888999999988632210 0 1111111112235788999999998 77777665
Q ss_pred CccEEEEcCccCCc---c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 DVNIVFHVAATVKF---D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
++|+|||+||.... + +.++..+++|+.|+.++++++... .+..++|++||..++....
T Consensus 88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 154 (255)
T 1fmc_A 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI------------- 154 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-------------
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC-------------
Confidence 79999999997542 2 234578999999999999988521 2567999999987643210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+++.++ .++.+.++||+.++++..... ..
T Consensus 155 -------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~-------~~ 202 (255)
T 1fmc_A 155 -------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-------IT 202 (255)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-------CC
T ss_pred -------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc-------cC
Confidence 01469999999999987764 589999999999998643210 00
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
..+...+..+ .....+++++|+|++++.++..
T Consensus 203 -~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 234 (255)
T 1fmc_A 203 -PEIEQKMLQH---------TPIRRLGQPQDIANAALFLCSP 234 (255)
T ss_dssp -HHHHHHHHHT---------CSSCSCBCHHHHHHHHHHHHSG
T ss_pred -hHHHHHHHhc---------CCcccCCCHHHHHHHHHHHhCC
Confidence 1222222222 1123578999999999887754
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-11 Score=130.83 Aligned_cols=177 Identities=14% Similarity=0.085 Sum_probs=123.2
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEEcCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFHVAA 82 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH~AA 82 (1217)
+||+.+.-|..+.++|.+. +=.+. +.+.+..... .. .++.+|++++ ++++.+++ ++|+|||+||
T Consensus 5 VtGasg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~-~~-~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag 75 (207)
T 2yut_A 5 ITGATGGLGGAFARALKGH-DLLLSGRRAGALAELAREV-GA-RALPADLADE------LEAKALLEEAGPLDLLVHAVG 75 (207)
T ss_dssp EETTTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHH-TC-EECCCCTTSH------HHHHHHHHHHCSEEEEEECCC
T ss_pred EEcCCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhc-cC-cEEEeeCCCH------HHHHHHHHhcCCCCEEEECCC
Confidence 5677777777777777553 10011 1111100001 11 7889999998 88888777 8999999999
Q ss_pred cCCc-------ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCc
Q psy13944 83 TVKF-------DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 83 ~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
.... .+.++..+++|+.|+.+++++|++ .+..+||++||..++....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~sS~~~~~~~~------------------------- 129 (207)
T 2yut_A 76 KAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARF-QKGARAVFFGAYPRYVQVP------------------------- 129 (207)
T ss_dssp CCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE-EEEEEEEEECCCHHHHSST-------------------------
T ss_pred cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh-cCCcEEEEEcChhhccCCC-------------------------
Confidence 7532 124567899999999999999965 3567999999987653210
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCc
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGI 230 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~ 230 (1217)
....|+.||+..|.+++.++ .++++.++||+.++++...
T Consensus 130 -------------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------------------- 173 (207)
T 2yut_A 130 -------------GFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA----------------------- 173 (207)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------------------
T ss_pred -------------CcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-----------------------
Confidence 01469999999999987764 5899999999999886310
Q ss_pred eeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 231 MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 231 l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
+.+....++++++|+|++++.++..+.
T Consensus 174 -----~~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 174 -----PLGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp -----GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred -----ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 011233679999999999998876543
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.09 E-value=6.3e-10 Score=123.23 Aligned_cols=66 Identities=12% Similarity=0.240 Sum_probs=55.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
+++++.+|++|+ +++..+++++|+|||+||.. .. . ++|+.||.+++++|++. ++++|||+||.+++
T Consensus 46 ~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~-~~----~--~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~ 111 (287)
T 2jl1_A 46 GVEVRHGDYNQP------ESLQKAFAGVSKLLFISGPH-YD----N--TLLIVQHANVVKAARDA-GVKHIAYTGYAFAE 111 (287)
T ss_dssp TCEEEECCTTCH------HHHHHHTTTCSEEEECCCCC-SC----H--HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGG
T ss_pred CCeEEEeccCCH------HHHHHHHhcCCEEEEcCCCC-cC----c--hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCC
Confidence 578999999984 47888889999999999952 22 1 57999999999999987 78999999998763
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.09 E-value=6.6e-10 Score=134.70 Aligned_cols=69 Identities=19% Similarity=0.135 Sum_probs=52.4
Q ss_pred EEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc----hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 554 LTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 554 V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f----~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
+.+|+.+.. ..++.++|+|||+||.... .......+++|+.||.+|+++|.+..++++|||+||+++|
T Consensus 187 v~~d~~~~~--------~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vy 258 (516)
T 3oh8_A 187 RFWDPLNPA--------SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFY 258 (516)
T ss_dssp EECCTTSCC--------TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGG
T ss_pred eeecccchh--------HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEe
Confidence 567776532 2345789999999997632 2345578899999999999994444488999999999999
Q ss_pred c
Q psy13944 630 C 630 (1217)
Q Consensus 630 g 630 (1217)
|
T Consensus 259 g 259 (516)
T 3oh8_A 259 G 259 (516)
T ss_dssp C
T ss_pred c
Confidence 8
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.7e-10 Score=120.80 Aligned_cols=183 Identities=16% Similarity=0.141 Sum_probs=125.3
Q ss_pred CcccCCCCCCcccHHHHHH-HHhcChh--HHHhhh-cCcc---cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAK-DFFADDA--FDRLRK-ENAN---FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~-~~l~~~v--fd~Lr~-~~p~---~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~ 80 (1217)
.-+||+.+.-|..+.++|. +. ...+ .++-.+ .... ...++.++.+|++++ +++..+++++|+|||+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~d~vv~~ 80 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNP------GXLEQAVTNAEVVFVG 80 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCH------HHHHHHHTTCSEEEES
T ss_pred EEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCccccchhhccCCCceEEEECCCCCH------HHHHHHHcCCCEEEEc
Confidence 5689999999999999998 42 2222 111111 1111 346899999999998 8999999999999999
Q ss_pred CccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 81 AATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 81 AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
|+.. |+. +++++++|++ .++++||++||..+++..... .....
T Consensus 81 ag~~------------n~~-~~~~~~~~~~-~~~~~iv~iSs~~~~~~~~~~-------------~~~~~---------- 123 (221)
T 3r6d_A 81 AMES------------GSD-MASIVKALSR-XNIRRVIGVSMAGLSGEFPVA-------------LEKWT---------- 123 (221)
T ss_dssp CCCC------------HHH-HHHHHHHHHH-TTCCEEEEEEETTTTSCSCHH-------------HHHHH----------
T ss_pred CCCC------------Chh-HHHHHHHHHh-cCCCeEEEEeeceecCCCCcc-------------ccccc----------
Confidence 9864 455 8999999988 478899999999887642210 00000
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCc
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSN 240 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~ 240 (1217)
....++.|+.+|..+|.++++ .+++++++||+.++++... + ...........
T Consensus 124 -----~~~~~~~y~~~K~~~e~~~~~--~~i~~~~vrpg~v~~~~~~---~------------------~~~~~~~~~~~ 175 (221)
T 3r6d_A 124 -----FDNLPISYVQGERQARNVLRE--SNLNYTILRLTWLYNDPEX---T------------------DYELIPEGAQF 175 (221)
T ss_dssp -----HHTSCHHHHHHHHHHHHHHHH--SCSEEEEEEECEEECCTTC---C------------------CCEEECTTSCC
T ss_pred -----ccccccHHHHHHHHHHHHHHh--CCCCEEEEechhhcCCCCC---c------------------ceeeccCCccC
Confidence 001123799999999999976 5899999999999986211 0 01111111111
Q ss_pred eeccccHHHHHHHHHHHH--Hhhh
Q psy13944 241 IVDMVPGDLVVNILLAAA--WDVA 262 (1217)
Q Consensus 241 ~~D~VpVDdVvnAii~aa--~~~~ 262 (1217)
...+++.+|+|++++.++ ..+.
T Consensus 176 ~~~~~~~~dvA~~~~~l~~~~~~~ 199 (221)
T 3r6d_A 176 NDAQVSREAVVKAIFDILHAADET 199 (221)
T ss_dssp CCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred CCceeeHHHHHHHHHHHHHhcChh
Confidence 223799999999999988 6544
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-10 Score=132.40 Aligned_cols=74 Identities=24% Similarity=0.345 Sum_probs=57.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch-hc-HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD-EH-FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~-~~-~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
.+++++.+|+++++ +++.+++++|+|||+||.+.+. .. .++.+++|+.||.+++++|++..++++|||+||+
T Consensus 59 ~~~~~~~~Dl~d~~------~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~ 132 (338)
T 2rh8_A 59 GDLKIFRADLTDEL------SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSA 132 (338)
T ss_dssp SCEEEEECCTTTSS------SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred CcEEEEecCCCChH------HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecH
Confidence 46889999999875 3566778999999999976543 22 2347899999999999999987448999999997
Q ss_pred ee
Q psy13944 627 YS 628 (1217)
Q Consensus 627 ~v 628 (1217)
.+
T Consensus 133 ~~ 134 (338)
T 2rh8_A 133 AA 134 (338)
T ss_dssp HH
T ss_pred HH
Confidence 63
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.3e-10 Score=122.74 Aligned_cols=193 Identities=17% Similarity=0.128 Sum_probs=130.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH 79 (1217)
.-+||+.+.-|..+.++|.+..... +. +.+.+.. ....+++++.+|++++ ++++.+++ .+|+|||
T Consensus 10 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~ 82 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA-KECPGIEPVCVDLGDW------DATEKALGGIGPVDLLVN 82 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHSTTCEEEECCTTCH------HHHHHHHTTCCCCSEEEE
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhccCCCcEEecCCCH------HHHHHHHHHcCCCCEEEE
Confidence 4589999999999999998742210 11 1111100 0124678889999998 78877765 4799999
Q ss_pred cCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCcccccccccccccccCCCCChHHHHH
Q psy13944 80 VAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 80 ~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
+||..... +.++..+++|+.|+.++++++.+. .+ ..+||++||..++....
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------------ 144 (244)
T 1cyd_A 83 NAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP------------------ 144 (244)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT------------------
T ss_pred CCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC------------------
Confidence 99975321 234578999999999999888653 12 57999999987654210
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
....|+.||+..|.+++.++ .++++.++||+.|+++...+. + ....++
T Consensus 145 --------------------~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~-----~~~~~~ 197 (244)
T 1cyd_A 145 --------------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--S-----ADPEFA 197 (244)
T ss_dssp --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--T-----CCHHHH
T ss_pred --------------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--c-----cCHHHH
Confidence 01369999999999987754 589999999999998742210 0 001222
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..+..+ ....++++++|+|++++.++...
T Consensus 198 ~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1cyd_A 198 RKLKER---------HPLRKFAEVEDVVNSILFLLSDR 226 (244)
T ss_dssp HHHHHH---------STTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhc---------CCccCCCCHHHHHHHHHHHhCch
Confidence 222222 12367999999999999887643
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=120.54 Aligned_cols=121 Identities=15% Similarity=0.159 Sum_probs=95.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
+++++.+|++++ +.+..+++++|+|||+||... ...+...+++|+.|+.+++++|++. ++++|||+||..++
T Consensus 43 ~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~ 114 (267)
T 3ay3_A 43 HEEIVACDLADA------QAVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTI 114 (267)
T ss_dssp TEEECCCCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGS
T ss_pred CccEEEccCCCH------HHHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHh
Confidence 578999999974 468888899999999999763 4556788899999999999999986 78899999999988
Q ss_pred cCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCce
Q psy13944 630 CNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGV 706 (1217)
Q Consensus 630 g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~ 706 (1217)
+... +++|..... ..+.|+.||+.+|.+++.|. ...++++
T Consensus 115 ~~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~~--------~~~gi~~ 157 (267)
T 3ay3_A 115 GYYPRTTRIDTEVPRR-----------------------------PDSLYGLSKCFGEDLASLYY--------HKFDIET 157 (267)
T ss_dssp TTSBTTSCBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHHHH--------HTTCCCE
T ss_pred CCCCCCCCCCCCCCCC-----------------------------CCChHHHHHHHHHHHHHHHH--------HHcCCCE
Confidence 7532 344442211 12479999999999997653 1347899
Q ss_pred eEeccCccc
Q psy13944 707 RVCRNHPVG 715 (1217)
Q Consensus 707 ~i~rp~~v~ 715 (1217)
.++||..|.
T Consensus 158 ~~lrp~~v~ 166 (267)
T 3ay3_A 158 LNIRIGSCF 166 (267)
T ss_dssp EEEEECBCS
T ss_pred EEEeceeec
Confidence 999998874
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.2e-10 Score=127.16 Aligned_cols=227 Identities=13% Similarity=0.054 Sum_probs=147.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhh---hcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLR---KENAN-FTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr---~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... +. +.+. ++... ...++.++.+|++++ ++++.+++
T Consensus 29 vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 29 AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP------DMVQNTVSELIKVA 102 (302)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH------HHHHHHHHHHHHHT
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCH------HHHHHHHHHHHHHc
Confidence 4478999999999999998742211 01 1111 11000 135789999999997 77766654
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+..++|++||.+++... +
T Consensus 103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~ 172 (302)
T 1w6u_A 103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS----------G 172 (302)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------T
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC----------C
Confidence 45999999996432 1235578999999999998887532 245699999998764321 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+++.++ .++++.++||+.|+++.... .....
T Consensus 173 ----------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~ 222 (302)
T 1w6u_A 173 ----------------------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS--RLDPT 222 (302)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--------CCTT
T ss_pred ----------------------------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh--hcccc
Confidence 11369999999999987764 58999999999998862110 00000
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIK 295 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~ 295 (1217)
. .....+..+ .....+++++|+|++++.++..... -
T Consensus 223 ~----~~~~~~~~~---------~p~~~~~~~~dva~~~~~l~~~~~~-------------------------------~ 258 (302)
T 1w6u_A 223 G----TFEKEMIGR---------IPCGRLGTVEELANLAAFLCSDYAS-------------------------------W 258 (302)
T ss_dssp S----HHHHHHHTT---------CTTSSCBCHHHHHHHHHHHTSGGGT-------------------------------T
T ss_pred h----hhHHHHHhc---------CCcCCCCCHHHHHHHHHHHcCCccc-------------------------------c
Confidence 0 011112222 1123578999999999877653322 0
Q ss_pred hccceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 296 KLDVNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 296 ~~g~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
..|+.|++++| .++..++++.+.+..|..
T Consensus 259 ~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~ 288 (302)
T 1w6u_A 259 INGAVIKFDGGEEVLISGEFNDLRKVTKEQ 288 (302)
T ss_dssp CCSCEEEESTTHHHHHHSTTGGGGGCCHHH
T ss_pred cCCCEEEECCCeeeccCCccccchhhcccc
Confidence 13778999988 777778877777766654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.5e-09 Score=118.56 Aligned_cols=229 Identities=13% Similarity=0.077 Sum_probs=135.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHh---hhcC---cccCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRL---RKEN---ANFTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~L---r~~~---p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.-+||+.+.-|....++|.+..... + -+.+ .++. .....++.++.+|++++ ++++.+++
T Consensus 9 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~ 82 (278)
T 1spx_A 9 AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD------AGQDEILSTTLG 82 (278)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH------HHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCH------HHHHHHHHHHHH
Confidence 4478999889999999998742211 1 1111 1111 11124688999999998 77777766
Q ss_pred ---CccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccc-ccccccccc
Q psy13944 73 ---DVNIVFHVAATVKF-----------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYS-NCNIKKIEE 134 (1217)
Q Consensus 73 ---~VDiViH~AA~v~f-----------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v-~g~~~~I~E 134 (1217)
++|+|||+||.... .+.++..+++|+.|+.++++++... .+ .++|++||..+ +...
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~----- 156 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT----- 156 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC-----
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC-----
Confidence 79999999997532 1234578999999999999988653 13 79999999765 3210
Q ss_pred cccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCC
Q psy13944 135 KFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPC 209 (1217)
Q Consensus 135 ~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~ 209 (1217)
| ....|+.||+..|.+.+..+ .++++.++||+.|.++.....
T Consensus 157 -----~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 203 (278)
T 1spx_A 157 -----P----------------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM 203 (278)
T ss_dssp -----T----------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----
T ss_pred -----C----------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcccccc
Confidence 0 01359999999999887654 589999999999988753211
Q ss_pred cccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCch
Q psy13944 210 PMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNV 289 (1217)
Q Consensus 210 pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~ 289 (1217)
..-.............+... . ....+++++|+|++++.++..... .
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~----~-----p~~~~~~~~dvA~~v~~l~s~~~~----~--------------------- 249 (278)
T 1spx_A 204 GMPEETSKKFYSTMATMKEC----V-----PAGVMGQPQDIAEVIAFLADRKTS----S--------------------- 249 (278)
T ss_dssp ----------HHHHHHHHHH----C-----TTSSCBCHHHHHHHHHHHHCHHHH----T---------------------
T ss_pred ccCchhhhhhhHHHHHHHhc----C-----CCcCCCCHHHHHHHHHHHcCcccc----C---------------------
Confidence 00000000000001111110 0 112478999999999887754332 0
Q ss_pred hhhhhhhccceeeccCC-ccCchHHHHHHHHh
Q psy13944 290 EEESIKKLDVNYEINHG-NYDTTNHVNYIKQN 320 (1217)
Q Consensus 290 ~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~ 320 (1217)
-..|+.+++.+| ..+..++++.+.+.
T Consensus 250 -----~~tG~~~~vdgG~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 250 -----YIIGHQLVVDGGSSLIMGLHCQDFAKL 276 (278)
T ss_dssp -----TCCSCEEEESTTGGGC-----------
T ss_pred -----cccCcEEEECCCcccccCcccccHHHH
Confidence 012778999888 78888888877764
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.2e-10 Score=120.20 Aligned_cols=72 Identities=17% Similarity=0.260 Sum_probs=60.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.+|+++ +++++..+++++|+|||+||...- ..+++|+.|+.+++++|++. ++++|||+||.++
T Consensus 41 ~~~~~~~~D~~d-----~~~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~ 109 (219)
T 3dqp_A 41 NNVKAVHFDVDW-----TPEEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFS 109 (219)
T ss_dssp TTEEEEECCTTS-----CHHHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTT
T ss_pred CCceEEEecccC-----CHHHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccc
Confidence 468999999998 235788888999999999997652 25678999999999999987 7899999999877
Q ss_pred ecC
Q psy13944 629 NCN 631 (1217)
Q Consensus 629 ~g~ 631 (1217)
++.
T Consensus 110 ~~~ 112 (219)
T 3dqp_A 110 LQP 112 (219)
T ss_dssp TCG
T ss_pred cCC
Confidence 653
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.3e-09 Score=118.42 Aligned_cols=185 Identities=11% Similarity=0.111 Sum_probs=128.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH~ 80 (1217)
.-+||+.+.-|....++|.+.... +.-.-|...+....++.++.+|++++ ++++.+++ ++|+|||+
T Consensus 31 vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~n 103 (260)
T 3un1_A 31 VVITGASQGIGAGLVRAYRDRNYR-VVATSRSIKPSADPDIHTVAGDISKP------ETADRIVREGIERFGRIDSLVNN 103 (260)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCCCCSSTTEEEEESCTTSH------HHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChhhcccCceEEEEccCCCH------HHHHHHHHHHHHHCCCCCEEEEC
Confidence 348999999999999999875332 22111222223344789999999998 77777665 78999999
Q ss_pred CccCCc-------ccCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 81 AATVKF-------DEHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 81 AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
||.... .+.++..+++|+.|+.++++++. + .+..++|++||..++.... .
T Consensus 104 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iv~isS~~~~~~~~-------~----------- 164 (260)
T 3un1_A 104 AGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLK-QGSGHIVSITTSLVDQPMV-------G----------- 164 (260)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEEECCTTTTSCBT-------T-----------
T ss_pred CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCcEEEEEechhhccCCC-------C-----------
Confidence 997532 12355788999999999999873 3 3557999999976533210 0
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
.....|+.||+..|.+.+.++ .++++.+++|+.|.++...+. ...
T Consensus 165 ------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~------------~~~ 214 (260)
T 3un1_A 165 ------------------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE------------THS 214 (260)
T ss_dssp ------------------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG------------GHH
T ss_pred ------------------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH------------HHH
Confidence 001369999999999887654 489999999999998754220 011
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHH
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAA 257 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~a 257 (1217)
.... ......+..++|+|++++.+
T Consensus 215 ~~~~---------~~p~~r~~~~~dva~av~~L 238 (260)
T 3un1_A 215 TLAG---------LHPVGRMGEIRDVVDAVLYL 238 (260)
T ss_dssp HHHT---------TSTTSSCBCHHHHHHHHHHH
T ss_pred HHhc---------cCCCCCCcCHHHHHHHHHHh
Confidence 1111 12234578899999999887
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-09 Score=119.93 Aligned_cols=198 Identities=17% Similarity=0.102 Sum_probs=130.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|..+.++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 24 vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 24 ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP------SEVVALFDKAVSHF 97 (274)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHHHc
Confidence 4488999999999999998742211 01111111111235788999999998 77777665
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccc-cccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSN-CNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~-g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||..... +.++..+++|+.|+.++++++.+. ++ .+||++||..++ ... +
T Consensus 98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~----------~- 165 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI----------P- 165 (274)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC----------C-
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC----------C-
Confidence 789999999975321 224578999999999999988753 12 599999998765 210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCC-----cc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPC-----PM 211 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~-----pG 211 (1217)
....|+.||+..|.+++.++ .++.+.++||+.|.++...+. ++
T Consensus 166 ---------------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~ 218 (274)
T 1ja9_A 166 ---------------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPG 218 (274)
T ss_dssp ---------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTT
T ss_pred ---------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhccccccccc
Confidence 01369999999999987754 589999999999987632210 00
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
...... .......+..+ ....++++++|+|++++.++..
T Consensus 219 ~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~dva~~i~~l~~~ 257 (274)
T 1ja9_A 219 GYKGMP-QEKIDEGLANM---------NPLKRIGYPADIGRAVSALCQE 257 (274)
T ss_dssp CCTTCC-HHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSG
T ss_pred ccccCc-hHHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCc
Confidence 000010 01112222222 2335689999999999888754
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.98 E-value=3.7e-10 Score=124.36 Aligned_cols=199 Identities=14% Similarity=0.115 Sum_probs=131.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... + -+.+.+...+...++.++.+|++++ ++++.+++ ++|
T Consensus 11 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 11 ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQ------DSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH------HHHHHHHHHHHHHSSSCC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCH------HHHHHHHHHHHHHcCCCC
Confidence 4489999999999999998743221 1 1222222222345789999999998 77777665 789
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+||..... +.++..+++|+.|+.++++++... +.-.++|++||...+... +
T Consensus 85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~---- 150 (259)
T 4e6p_A 85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE----------A---- 150 (259)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------T----
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC----------C----
Confidence 999999975321 235578899999999999988642 113489999997653221 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||+..|.+.+.++ .++.+.+++|+.|.++.....
T Consensus 151 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---------- 196 (259)
T 4e6p_A 151 ------------------------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV---------- 196 (259)
T ss_dssp ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----------
T ss_pred ------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----------
Confidence 01369999999999887754 589999999999998743211
Q ss_pred HHHHHHHhc---CceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 220 TAMYVAVGL---GIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 220 ~~li~~~~~---G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
..++..... +......++.....++.+++|+|++++.++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~ 240 (259)
T 4e6p_A 197 DALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASA 240 (259)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSG
T ss_pred hhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCC
Confidence 011111100 00000111223446789999999998876654
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=8.6e-10 Score=125.32 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=92.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch--hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD--EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~--~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
.+++++.||+++++ +++.+++++|+|||+||...+. .+....+++|+.||.+|+++|++...+++|||+||+
T Consensus 56 ~~~~~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~ 129 (337)
T 2c29_D 56 THLTLWKADLADEG------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSA 129 (337)
T ss_dssp HHEEEEECCTTSTT------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCG
T ss_pred CeEEEEEcCCCCHH------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeH
Confidence 36889999999865 3667778999999999976543 223357899999999999999987448999999998
Q ss_pred ee-ecCc---ccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccC
Q psy13944 627 YS-NCNI---KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSH 702 (1217)
Q Consensus 627 ~v-~g~~---~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~ 702 (1217)
.+ ++.. ..++|....++ .. ..+ .....+.|+.||+++|.++..|. ...
T Consensus 130 ~~~~~~~~~~~~~~E~~~~~~----~~--------------~~~--~~~~~~~Y~~sK~~~E~~~~~~~--------~~~ 181 (337)
T 2c29_D 130 GTVNIQEHQLPVYDESCWSDM----EF--------------CRA--KKMTAWMYFVSKTLAEQAAWKYA--------KEN 181 (337)
T ss_dssp GGTSCSSSCCSEECTTCCCCH----HH--------------HHH--HCCTTHHHHHHHHHHHHHHHHHH--------HHH
T ss_pred hhcccCCCCCcccCcccCCch----hh--------------hcc--cCCccchHHHHHHHHHHHHHHHH--------HHc
Confidence 64 4332 13455422110 00 000 00112359999999999997664 123
Q ss_pred CCceeEeccCccc
Q psy13944 703 DRGVRVCRNHPVG 715 (1217)
Q Consensus 703 ~l~~~i~rp~~v~ 715 (1217)
+++++++||..|-
T Consensus 182 gi~~~~lrp~~v~ 194 (337)
T 2c29_D 182 NIDFITIIPTLVV 194 (337)
T ss_dssp TCCEEEEEECEEE
T ss_pred CCcEEEEeCCceE
Confidence 7999999998874
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.3e-09 Score=115.99 Aligned_cols=195 Identities=12% Similarity=0.071 Sum_probs=129.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|..+.++|.+...+. + .+.+.++......++.++.+|++++ ++++.+++
T Consensus 16 vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 16 AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT------ESVQNAVRSVHEQEG 89 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHHHHHHHcC
Confidence 4488999999999999998742210 0 1111111111235789999999998 77776654
Q ss_pred CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||... +. +.+...+++|+.|+.++++++.+. .+..++|++||.+.+... +.
T Consensus 90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~ 159 (260)
T 3awd_A 90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN----------RP 159 (260)
T ss_dssp CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------SS
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC----------CC
Confidence 6899999999653 11 124578999999999999988642 245799999998654321 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
.....|+.||+..|.+++.++ .++++.++||+.|+++...+ + .
T Consensus 160 --------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~--~----~ 207 (260)
T 3awd_A 160 --------------------------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF--G----M 207 (260)
T ss_dssp --------------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH--H----H
T ss_pred --------------------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc--c----c
Confidence 001469999999999987654 58999999999999985421 0 0
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.. ..+...+..+ .....+++++|+|++++.++..
T Consensus 208 ~~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 241 (260)
T 3awd_A 208 EK-PELYDAWIAG---------TPMGRVGQPDEVASVVQFLASD 241 (260)
T ss_dssp TC-HHHHHHHHHT---------CTTSSCBCHHHHHHHHHHHHSG
T ss_pred CC-hHHHHHHHhc---------CCcCCCCCHHHHHHHHHHHhCc
Confidence 00 1222222222 1123588999999999887754
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.1e-09 Score=118.76 Aligned_cols=193 Identities=17% Similarity=0.165 Sum_probs=129.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH 79 (1217)
.-+||+.+.-|....++|.+..... +. +.+.+... ...++.++.+|++++ ++++.+++ .+|+|||
T Consensus 10 vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~ 82 (244)
T 3d3w_A 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR-ECPGIEPVCVDLGDW------EATERALGSVGPVDLLVN 82 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HSTTCEEEECCTTCH------HHHHHHHTTCCCCCEEEE
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCCCEEEEeCCCH------HHHHHHHHHcCCCCEEEE
Confidence 4589999999999999998742211 11 11111101 123577889999998 78877765 5899999
Q ss_pred cCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCcccccccccccccccCCCCChHHHHH
Q psy13944 80 VAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 80 ~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
+||..... +.++..+++|+.|+.++++++.+. .+ ..++|++||..++....
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------------ 144 (244)
T 3d3w_A 83 NAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT------------------ 144 (244)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT------------------
T ss_pred CCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC------------------
Confidence 99975321 235578999999999999888653 12 57899999986543210
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
....|+.||+..|.+++.++ .++++.++||+.|+++..... +.+. ...
T Consensus 145 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~-----~~~ 197 (244)
T 3d3w_A 145 --------------------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--WSDP-----HKA 197 (244)
T ss_dssp --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH--SCST-----THH
T ss_pred --------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh--ccCh-----HHH
Confidence 01369999999999987654 579999999999998753210 1000 111
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..+..+ ....++++++|+|++++.++...
T Consensus 198 ~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 3d3w_A 198 KTMLNR---------IPLGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp HHHHHT---------CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhh---------CCCCCCcCHHHHHHHHHHHcCcc
Confidence 112221 12246899999999999887643
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.9e-10 Score=119.74 Aligned_cols=170 Identities=12% Similarity=0.134 Sum_probs=120.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC---ccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED---VNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~---VDiViH~AA~v 84 (1217)
.-.||+.+.-|..+.++|. . ...+.-.-|. +. .+.+|++++ ++++.++++ +|+|||+||..
T Consensus 6 vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r~--~~------~~~~D~~~~------~~~~~~~~~~~~~d~vi~~ag~~ 69 (202)
T 3d7l_A 6 ILLIGASGTLGSAVKERLE-K-KAEVITAGRH--SG------DVTVDITNI------DSIKKMYEQVGKVDAIVSATGSA 69 (202)
T ss_dssp EEEETTTSHHHHHHHHHHT-T-TSEEEEEESS--SS------SEECCTTCH------HHHHHHHHHHCCEEEEEECCCCC
T ss_pred EEEEcCCcHHHHHHHHHHH-C-CCeEEEEecC--cc------ceeeecCCH------HHHHHHHHHhCCCCEEEECCCCC
Confidence 4578888888988888886 3 3333211111 11 478999987 777776654 89999999965
Q ss_pred Cc---c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcc
Q psy13944 85 KF---D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHT 156 (1217)
Q Consensus 85 ~f---~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~ 156 (1217)
.. . +.++..+++|+.|+.+++++|.+. ..-.++|++||.+++... +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~----------~---------------- 123 (202)
T 3d7l_A 70 TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI----------V---------------- 123 (202)
T ss_dssp CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC----------T----------------
T ss_pred CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC----------C----------------
Confidence 32 1 223467889999999999999764 112589999997653211 0
Q ss_pred cccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCcee
Q psy13944 157 ELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMR 232 (1217)
Q Consensus 157 ~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~ 232 (1217)
....|+.||+..|.+++.++ .++++.++||+.++++... ..
T Consensus 124 ------------~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------------~~----- 168 (202)
T 3d7l_A 124 ------------QGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK------------------LE----- 168 (202)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH------------------HG-----
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh------------------hh-----
Confidence 01369999999999998876 3899999999999886310 01
Q ss_pred EEeeCCCceeccccHHHHHHHHHHHH
Q psy13944 233 TVYQNTSNIVDMVPGDLVVNILLAAA 258 (1217)
Q Consensus 233 ~i~g~~~~~~D~VpVDdVvnAii~aa 258 (1217)
+.....++++++|+|++++.++
T Consensus 169 ----~~~~~~~~~~~~dva~~~~~~~ 190 (202)
T 3d7l_A 169 ----PFFEGFLPVPAAKVARAFEKSV 190 (202)
T ss_dssp ----GGSTTCCCBCHHHHHHHHHHHH
T ss_pred ----hhccccCCCCHHHHHHHHHHhh
Confidence 1123457899999999988776
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-09 Score=116.41 Aligned_cols=188 Identities=11% Similarity=0.046 Sum_probs=129.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------CccEEEEcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------DVNIVFHVA 81 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------~VDiViH~A 81 (1217)
.-+||+.+.-|..+.++|.+...+ +.-.-|. +. .+++.++.+|++++ ++++.+++ ++|+|||+|
T Consensus 5 vlVtGasggiG~~la~~l~~~G~~-V~~~~r~--~~-~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~d~li~~a 74 (242)
T 1uay_A 5 ALVTGGASGLGRAAALALKARGYR-VVVLDLR--RE-GEDLIYVEGDVTRE------EDVRRAVARAQEEAPLFAVVSAA 74 (242)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCE-EEEEESS--CC-SSSSEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECC
T ss_pred EEEeCCCChHHHHHHHHHHHCCCE-EEEEccC--cc-ccceEEEeCCCCCH------HHHHHHHHHHHhhCCceEEEEcc
Confidence 347899999999999999875332 2111111 22 56779999999998 78877776 789999999
Q ss_pred ccCCcc-------c----CHHHHHHHHHHHHHHHHHHhHhc-CC--------CCeEEEEcCcccccccccccccccCCCC
Q psy13944 82 ATVKFD-------E----HFQTAFEINCKGTEKLLKMAEEM-KN--------LDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 82 A~v~f~-------e----~l~~a~~vNV~GT~~LLelAk~~-~~--------lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
|..... + .++..+++|+.|+.+++++|.+. .. ..+||++||..++....
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 143 (242)
T 1uay_A 75 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI----------- 143 (242)
T ss_dssp CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----------
T ss_pred cccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-----------
Confidence 975321 1 45688999999999999988653 11 12899999987654210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+++..+ .++++.++||+.|+++.....+
T Consensus 144 ---------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------ 190 (242)
T 1uay_A 144 ---------------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP------ 190 (242)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC------
T ss_pred ---------------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc------
Confidence 01469999999998876654 4899999999999987432211
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
..+...+..+.. ....+++++|+|++++.++..
T Consensus 191 ---~~~~~~~~~~~~--------~~~~~~~~~dva~~~~~l~~~ 223 (242)
T 1uay_A 191 ---EKAKASLAAQVP--------FPPRLGRPEEYAALVLHILEN 223 (242)
T ss_dssp ---HHHHHHHHTTCC--------SSCSCCCHHHHHHHHHHHHHC
T ss_pred ---hhHHHHHHhhCC--------CcccCCCHHHHHHHHHHHhcC
Confidence 111222222211 003478999999999988765
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-09 Score=115.55 Aligned_cols=184 Identities=11% Similarity=0.067 Sum_probs=116.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--hHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--AFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
.-+||+.+.-|..+.++|.+..... +.++-.+... ....++.++.+|++++ ++++.+++++|+|||+|+..
T Consensus 26 vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNH------AALKQAMQGQDIVYANLTGE 99 (236)
T ss_dssp EEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCH------HHHHHHHTTCSEEEEECCST
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCH------HHHHHHhcCCCEEEEcCCCC
Confidence 4578999999999999887654111 2221111111 1235799999999998 89999999999999999864
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccc
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDI 164 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~ 164 (1217)
.+. .++.+++++|++. ++++||++||..+++..... . .+. ++
T Consensus 100 ~~~-----------~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~---~--~~~------------~~--------- 141 (236)
T 3qvo_A 100 DLD-----------IQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGK---F--VEW------------NN--------- 141 (236)
T ss_dssp THH-----------HHHHHHHHHHHHT-TCCEEEEECCCCC---------------------------------------
T ss_pred chh-----------HHHHHHHHHHHHc-CCCEEEEEecceecCCCCcc---c--ccc------------hh---------
Confidence 321 3567899999884 78999999999888753210 0 000 00
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc
Q psy13944 165 LIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 165 ~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~ 244 (1217)
..+..+...|..+|+.+.. .+++++++||+.++++..... ............+
T Consensus 142 ---~~~~~~~~~~~~~~~~l~~--~gi~~~~vrPg~i~~~~~~~~----------------------~~~~~~~~~~~~~ 194 (236)
T 3qvo_A 142 ---AVIGEPLKPFRRAADAIEA--SGLEYTILRPAWLTDEDIIDY----------------------ELTSRNEPFKGTI 194 (236)
T ss_dssp ------CGGGHHHHHHHHHHHT--SCSEEEEEEECEEECCSCCCC----------------------EEECTTSCCSCSE
T ss_pred ---hcccchHHHHHHHHHHHHH--CCCCEEEEeCCcccCCCCcce----------------------EEeccCCCCCCcE
Confidence 0111233445556666653 589999999999998643211 0011111112358
Q ss_pred ccHHHHHHHHHHHHHhhh
Q psy13944 245 VPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~~~ 262 (1217)
++++|||++++.++..+.
T Consensus 195 i~~~DvA~~i~~ll~~~~ 212 (236)
T 3qvo_A 195 VSRKSVAALITDIIDKPE 212 (236)
T ss_dssp EEHHHHHHHHHHHHHSTT
T ss_pred ECHHHHHHHHHHHHcCcc
Confidence 999999999999988755
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=4.9e-09 Score=115.83 Aligned_cols=64 Identities=14% Similarity=0.176 Sum_probs=49.8
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
+++++.+|++|+ +++..+++++|+|||+||.. . ..|+.||.+++++|++. ++++|||+||..++
T Consensus 45 ~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~-~--------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~ 108 (286)
T 2zcu_A 45 GITVRQADYGDE------AALTSALQGVEKLLLISSSE-V--------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHAD 108 (286)
T ss_dssp TCEEEECCTTCH------HHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTT
T ss_pred CCeEEEcCCCCH------HHHHHHHhCCCEEEEeCCCC-c--------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCC
Confidence 578999999984 47888889999999999952 1 24899999999999987 78999999998664
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.5e-09 Score=114.89 Aligned_cols=190 Identities=14% Similarity=0.138 Sum_probs=120.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|..+.++|.+.... .-.+.+.++......++.++.+|++++ ++++.+++
T Consensus 8 vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 8 AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNP------EDVENMVKTAMDAF 81 (247)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSH------HHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHHhc
Confidence 457899989999999999873211 111111111111235789999999998 77776665
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccc-ccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYS-NCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p 140 (1217)
++|+|||+||.... .+.++..+++|+.|+.++++++.+. .+..++|++||... ++. |
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~ 150 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN-----------A 150 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------C
Confidence 78999999997532 1234578999999999888887542 24579999999743 221 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+++.++ .++++.++||+.+.++....
T Consensus 151 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------- 195 (247)
T 2hq1_A 151 ----------------------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV------- 195 (247)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-------
T ss_pred ----------------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-------
Confidence 01369999999999887754 48899999999887652211
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. +......+..+ .....+++++|++++++.++..
T Consensus 196 ~--~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 229 (247)
T 2hq1_A 196 L--PDKVKEMYLNN---------IPLKRFGTPEEVANVVGFLASD 229 (247)
T ss_dssp S--CHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSG
T ss_pred c--chHHHHHHHhh---------CCCCCCCCHHHHHHHHHHHcCc
Confidence 1 11112222222 1224588999999999877754
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.8e-09 Score=115.77 Aligned_cols=191 Identities=14% Similarity=0.110 Sum_probs=124.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccC-------CCeEEEEccCCCCCCCCCHHHHHHhcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFT-------ERIVVLTADLQSDGLGLDEKEKKVLRE 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~-------~kI~~V~GDl~d~~LGLs~edl~~L~~ 72 (1217)
.-+||+.+.-|..+.++|.+.... .-.+.+.++..... .++.++.+|++++ ++++.+++
T Consensus 10 vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~ 83 (264)
T 2pd6_A 10 ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEA------RAARCLLE 83 (264)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSH------HHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCH------HHHHHHHH
Confidence 458999999999999999874221 00111111111111 5788999999997 77776665
Q ss_pred C-------c-cEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCccccccccccc
Q psy13944 73 D-------V-NIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIE 133 (1217)
Q Consensus 73 ~-------V-DiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~ 133 (1217)
+ + |+|||+||.... .+.++..+++|+.|+.++++++.+. .+ ..+||++||.+.....
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 159 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---- 159 (264)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC----
T ss_pred HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC----
Confidence 4 3 999999997642 1235578999999999999998753 12 4689999997653210
Q ss_pred ccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCC
Q psy13944 134 EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEP 208 (1217)
Q Consensus 134 E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP 208 (1217)
+ ....|+.||+..|.+++.++ .++++.++||+.|+++....
T Consensus 160 ------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 205 (264)
T 2pd6_A 160 ------V----------------------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK 205 (264)
T ss_dssp ------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred ------C----------------------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence 0 01369999999998887654 58999999999999985432
Q ss_pred CcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 209 CPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 209 ~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+ ..+...+..+ .....+++++|+|++++.++..
T Consensus 206 ~~---------~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 239 (264)
T 2pd6_A 206 VP---------QKVVDKITEM---------IPMGHLGDPEDVADVVAFLASE 239 (264)
T ss_dssp ----------------CTGGG---------CTTCSCBCHHHHHHHHHHHHSG
T ss_pred cC---------HHHHHHHHHh---------CCCCCCCCHHHHHHHHHHHcCC
Confidence 11 0111111111 1123578999999999887754
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.90 E-value=7.1e-09 Score=115.47 Aligned_cols=226 Identities=13% Similarity=0.114 Sum_probs=149.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcc---cCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENAN---FTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~---~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.-+||+.+.-|....++|.+..... + .+.+.++... ...++.++.+|++++ ++++.+++
T Consensus 14 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~ 87 (281)
T 3svt_A 14 YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNE------DETARAVDAVTA 87 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSH------HHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCH------HHHHHHHHHHHH
Confidence 3478999999999999998743221 1 1111111111 122788999999998 77776654
Q ss_pred ---CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 ---DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ---~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|++||+||... +. +.++..+++|+.|+.++++++... .+-.++|++||...+....
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 159 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR-------- 159 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT--------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC--------
Confidence 6799999999732 21 234578999999999999987652 2234899999976543210
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
....|+.||+..|.+.+.++ .++.+..++|+.|.++.....
T Consensus 160 ------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---- 205 (281)
T 3svt_A 160 ------------------------------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI---- 205 (281)
T ss_dssp ------------------------------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH----
T ss_pred ------------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc----
Confidence 11469999999999987654 579999999999988643210
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEES 293 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~ 293 (1217)
............+ .....+..++|+|++++.++..... .
T Consensus 206 ---~~~~~~~~~~~~~---------~p~~r~~~~~dva~~~~~l~s~~~~----~------------------------- 244 (281)
T 3svt_A 206 ---TESAELSSDYAMC---------TPLPRQGEVEDVANMAMFLLSDAAS----F------------------------- 244 (281)
T ss_dssp ---HTCHHHHHHHHHH---------CSSSSCBCHHHHHHHHHHHHSGGGT----T-------------------------
T ss_pred ---ccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccC----C-------------------------
Confidence 0011112222111 1223467899999999887765333 0
Q ss_pred hhhccceeeccCC-ccC-chHHHHHHHHhhchh
Q psy13944 294 IKKLDVNYEINHG-NYD-TTNHVNYIKQNIKEK 324 (1217)
Q Consensus 294 ~~~~g~~YnI~sg-~~s-~~el~~~ia~~~g~~ 324 (1217)
..|+.+++..| ... ..++++.+.+.+|.+
T Consensus 245 --itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 245 --VTGQVINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp --CCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred --CCCCEEEeCCChhcccCCcchhccccccCCc
Confidence 13888999888 555 668888888888765
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.90 E-value=5.5e-09 Score=113.08 Aligned_cols=189 Identities=11% Similarity=0.131 Sum_probs=125.8
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
+||+.+.-|..+.++|.+..... -.+.+.++......++.++.+|++++ ++++.+++ +
T Consensus 6 VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 6 VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE------ADVEAMMKTAIDAWGT 79 (244)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSH------HHHHHHHHHHHHHSSC
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCH------HHHHHHHHHHHHHcCC
Confidence 68888888888888888732111 11111111111234688999999998 77776665 6
Q ss_pred ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|+|||+||..... +.++..+++|+.|+.++++.+.+. .+..+||++||...+.. .+
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~--- 146 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG----------NI--- 146 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----------CT---
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC----------CC---
Confidence 89999999976421 235578999999999999988653 25679999999755321 00
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+.++ .++++.++||+.|.++..... .
T Consensus 147 -------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~- 193 (244)
T 1edo_A 147 -------------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL-------G- 193 (244)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-------C-
T ss_pred -------------------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc-------C-
Confidence 01369999999888876653 589999999999987642211 0
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......+... .....+++++|+|++++.++..
T Consensus 194 -~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 225 (244)
T 1edo_A 194 -EDMEKKILGT---------IPLGRTGQPENVAGLVEFLALS 225 (244)
T ss_dssp -HHHHHHHHTS---------CTTCSCBCHHHHHHHHHHHHHC
T ss_pred -hHHHHHHhhc---------CCCCCCCCHHHHHHHHHHHhCC
Confidence 1111122111 1123588999999999888744
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.89 E-value=6.5e-09 Score=112.66 Aligned_cols=183 Identities=14% Similarity=0.109 Sum_probs=126.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcC------hh---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD------DA---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~------~v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~- 72 (1217)
-+||+.+.-|..+.++|.+.... .+ .+.+.++......++.++.+|++++ ++++.+++
T Consensus 6 lITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~ 79 (244)
T 2bd0_A 6 LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDM------ADVRRLTTH 79 (244)
T ss_dssp EEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSH------HHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCH------HHHHHHHHH
Confidence 36888888888888888764320 11 1112111111234688999999997 77776654
Q ss_pred ------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccc
Q psy13944 73 ------DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 73 ------~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++.+... .+..++|++||..++...
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 152 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF------- 152 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC-------
Confidence 699999999975421 235578999999999999988531 245799999998764321
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
+ ....|+.||+..|.+++..+ .++++.++||+.|+++.....+.
T Consensus 153 ---~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~ 201 (244)
T 2bd0_A 153 ---R----------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD 201 (244)
T ss_dssp ---T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS
T ss_pred ---C----------------------------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc
Confidence 0 01469999999999885543 68999999999999975432110
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.. ...+++++|+|++++.++....
T Consensus 202 --------------------------~~-~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 202 --------------------------EM-QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp --------------------------TT-GGGSBCHHHHHHHHHHHHTSCT
T ss_pred --------------------------cc-cccCCCHHHHHHHHHHHHhCCc
Confidence 00 1257899999999998886543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=8.1e-09 Score=112.75 Aligned_cols=192 Identities=12% Similarity=0.104 Sum_probs=130.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 7 ~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA------DEVKAMIKEVVSQF 80 (246)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHc
Confidence 3478888888999999998743221 11222222222345788999999998 77777665
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++ ++ .+..++|++||...+... |
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~----------~ 149 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLR-QRSGAIINLSSVVGAVGN----------P 149 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCHHHHHCC----------T
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCCEEEEEcchhhcCCC----------C
Confidence 78999999997532 1234578999999999999998 33 245699999997653210 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+.+.++ .++++..++|+.|.++......
T Consensus 150 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----- 196 (246)
T 3osu_A 150 ----------------------------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS----- 196 (246)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC-----
T ss_pred ----------------------------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC-----
Confidence 01369999998888876554 5899999999999887543221
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
......+..+ .....+...+|+|++++.++....
T Consensus 197 ----~~~~~~~~~~---------~p~~r~~~~~dva~~v~~l~s~~~ 230 (246)
T 3osu_A 197 ----DELKEQMLTQ---------IPLARFGQDTDIANTVAFLASDKA 230 (246)
T ss_dssp ----HHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred ----HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccc
Confidence 1222233322 223457789999999987765433
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.1e-08 Score=109.68 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=49.3
Q ss_pred HhcCccEEEEcCccc------cchhcH-HHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEccceeecCcc--cccccc
Q psy13944 573 LREDVNIVFHVAATV------KFDEHF-QTAFEINCKGTEKLLKMAEEMK-NLDSFIYVSTAYSNCNIK--KIEEKF 639 (1217)
Q Consensus 573 L~~~vdvVfH~AA~v------~f~~~~-~~~~~~NV~GT~nLLelA~~~~-~lk~fV~vSTa~v~g~~~--~I~E~~ 639 (1217)
.++++|+|||+|+.. .+.... ....+.|+.||.+|+++|+..+ +...||++||+++||+.. .++|+.
T Consensus 48 ~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~ 124 (298)
T 4b4o_A 48 GLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDS 124 (298)
T ss_dssp CCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTC
T ss_pred hccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccC
Confidence 347899999999842 122222 3678899999999999999863 345689999999998754 455553
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3e-09 Score=115.37 Aligned_cols=191 Identities=11% Similarity=0.066 Sum_probs=125.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|..+.++|.+..... + .+.+.++... ...++.++.+|++++ ++++.+++
T Consensus 10 vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 10 SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE------ESINKAFEEIYNLV 83 (248)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCH------HHHHHHHHHHHHHS
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCH------HHHHHHHHHHHHhc
Confidence 4589999999999999998732210 0 1111111111 234789999999997 77777665
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||..... +.++..+++|+.|+.++++.+.+. .+..+||++||..+.... +
T Consensus 84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~- 152 (248)
T 2pnf_A 84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN----------V- 152 (248)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC----------T-
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC----------C-
Confidence 799999999975421 234578999999997777655321 256799999997543210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+.+.++ .++++.++||+.+.++.....+
T Consensus 153 ---------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~------ 199 (248)
T 2pnf_A 153 ---------------------------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS------ 199 (248)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC------
T ss_pred ---------------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc------
Confidence 01369999999998887654 5799999999999887432111
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......+..+ .....+++++|++++++.++..
T Consensus 200 ---~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 231 (248)
T 2pnf_A 200 ---EEIKQKYKEQ---------IPLGRFGSPEEVANVVLFLCSE 231 (248)
T ss_dssp ---HHHHHHHHHT---------CTTSSCBCHHHHHHHHHHHHSG
T ss_pred ---HHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCc
Confidence 1111111111 1123588999999999887754
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=9e-09 Score=112.16 Aligned_cols=193 Identities=15% Similarity=0.106 Sum_probs=124.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH 79 (1217)
.-+||+.+.-|....++|.+.... .--+.+.+.......++.++.+|++++ +++..+++ ++|+|||
T Consensus 17 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 17 SLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANK------EECSNLISKTSNLDILVC 90 (249)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSH------HHHHHHHHTCSCCSEEEE
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCH------HHHHHHHHhcCCCCEEEE
Confidence 448999999999999999874321 111222222223345789999999997 77776665 6899999
Q ss_pred cCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 80 VAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 80 ~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
+||.... .+.++..+++|+.|+.++++.+... .+..++|++||..++... +
T Consensus 91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--------- 151 (249)
T 3f9i_A 91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN----------P--------- 151 (249)
T ss_dssp CCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC----------S---------
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC----------C---------
Confidence 9997532 2456789999999999998887431 244689999997654321 0
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
....|+.||+..|.+++.++ .++.+.+++|+.|.++...... .....
T Consensus 152 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~ 203 (249)
T 3f9i_A 152 -------------------GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---------EKQRE 203 (249)
T ss_dssp -------------------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---------HHHHH
T ss_pred -------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---------HHHHH
Confidence 01369999998888876654 5899999999999876432211 11111
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.+..+ .....+..++|+|++++.++....
T Consensus 204 ~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~ 232 (249)
T 3f9i_A 204 AIVQK---------IPLGTYGIPEDVAYAVAFLASNNA 232 (249)
T ss_dssp HHHHH---------CTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhc---------CCCCCCcCHHHHHHHHHHHcCCcc
Confidence 11111 223468899999999988776543
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=98.87 E-value=9.8e-09 Score=110.83 Aligned_cols=74 Identities=9% Similarity=0.012 Sum_probs=63.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
++.++.+|+++++ +++.+++++|+|||+||........+..+++|+.|+.+++++|++. +.++||++||..++
T Consensus 64 ~~~~~~~D~~d~~------~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~ 136 (242)
T 2bka_A 64 NVNQEVVDFEKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGAD 136 (242)
T ss_dssp GCEEEECCGGGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCC
T ss_pred CceEEecCcCCHH------HHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCC
Confidence 5788999999864 5677788999999999976655566778899999999999999986 68899999998876
Q ss_pred c
Q psy13944 630 C 630 (1217)
Q Consensus 630 g 630 (1217)
+
T Consensus 137 ~ 137 (242)
T 2bka_A 137 K 137 (242)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.2e-08 Score=111.21 Aligned_cols=192 Identities=12% Similarity=0.078 Sum_probs=128.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|..+.++|.+.... .-.+.+.++......++.++.+|++++ ++++.+++
T Consensus 10 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 10 VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATS------EACQQLVDEFVAKF 83 (258)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCH------HHHHHHHHHHHHHc
Confidence 448899999999999999873211 001111111111134688999999998 77777766
Q ss_pred -CccEEEEcCcc-CC---cc----cCHHHHHHHHHHHHHHHHHHhHhc--------CCCCeEEEEcCccccccccccccc
Q psy13944 73 -DVNIVFHVAAT-VK---FD----EHFQTAFEINCKGTEKLLKMAEEM--------KNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 73 -~VDiViH~AA~-v~---f~----e~l~~a~~vNV~GT~~LLelAk~~--------~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
++|+|||+||. .. +. +.++..+++|+.|+.++++++... ....++|++||.+.+..
T Consensus 84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------- 156 (258)
T 3afn_B 84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG------- 156 (258)
T ss_dssp SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-------
T ss_pred CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-------
Confidence 79999999996 32 21 124578899999999998876431 11268999999865431
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
+.+ ....|+.||+..|.+++.++ .++++.++||+.|+++.....
T Consensus 157 --~~~----------------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~- 205 (258)
T 3afn_B 157 --GGP----------------------------GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK- 205 (258)
T ss_dssp --CCT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-
T ss_pred --CCC----------------------------CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-
Confidence 000 01369999999999987654 489999999999998754321
Q ss_pred ccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 211 GWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
...+...+..+ ....++++++|+|++++.++..
T Consensus 206 --------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 238 (258)
T 3afn_B 206 --------TQDVRDRISNG---------IPMGRFGTAEEMAPAFLFFASH 238 (258)
T ss_dssp --------CHHHHHHHHTT---------CTTCSCBCGGGTHHHHHHHHCH
T ss_pred --------CHHHHHHHhcc---------CCCCcCCCHHHHHHHHHHHhCc
Confidence 01222222222 1234689999999999887754
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.1e-08 Score=111.29 Aligned_cols=192 Identities=11% Similarity=0.105 Sum_probs=127.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+.-|....++|.+..... -.+.+.++. .....++.++.+|++++ ++++.+++
T Consensus 6 lItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 6 IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE------GDVNAAIAATMEQFG 79 (250)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHHHhC
Confidence 478888888999999998742210 011111111 11234689999999998 77777665
Q ss_pred CccEEEEcCccCCc------c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 DVNIVFHVAATVKF------D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~f------~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
++|+|||+||.... . +.++..+++|+.|+.++++.+... .+..++|++||..++...
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 149 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF---------- 149 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------
Confidence 78999999997532 1 235578899999998877766431 246799999998664321
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
+ ....|+.||+..|.+++.++ .++++.++||+.|+++..... .
T Consensus 150 ~----------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~- 197 (250)
T 2cfc_A 150 P----------------------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR---L- 197 (250)
T ss_dssp T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH---H-
T ss_pred C----------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc---c-
Confidence 0 01469999999999987764 489999999999999753210 0
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
....+...+..+ .....+...+|+|++++.++..
T Consensus 198 ---~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 231 (250)
T 2cfc_A 198 ---DQPELRDQVLAR---------IPQKEIGTAAQVADAVMFLAGE 231 (250)
T ss_dssp ---TSHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHST
T ss_pred ---CCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 001122222222 1123578999999999887754
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.86 E-value=7.5e-09 Score=113.80 Aligned_cols=191 Identities=14% Similarity=0.130 Sum_probs=115.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------- 71 (1217)
.-+||+.+.-|..+.++|.+..... -.+.+.++......++.++.+|++++ ++++.++
T Consensus 17 vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 17 VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR------PEREKLMQTVSSMFG 90 (266)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH------HHHHHHHHHHHHHHT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCH------HHHHHHHHHHHHHhC
Confidence 4478999999999999998742210 01111111111234688999999997 7777665
Q ss_pred CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 72 EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.++|+|||+||.... .+.++..+++|+.|+.++++++. + .+..++|++||..++....
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~~---------- 159 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA-SGCGNIIFMSSIAGVVSAS---------- 159 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSSCEEEEEC-------------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCcEEEEEccchhccCCC----------
Confidence 578999999997532 12345789999999999999983 3 2567999999986543210
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+++.++ .++++.++||+.|+++...... +
T Consensus 160 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~- 207 (266)
T 1xq1_A 160 ----------------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---D- 207 (266)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------
T ss_pred ----------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---C-
Confidence 01469999999999887654 4899999999999998543210 0
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
..+...+..+ .....+++++|++++++.++..
T Consensus 208 ----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 239 (266)
T 1xq1_A 208 ----DEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMP 239 (266)
T ss_dssp -----------------------------CCGGGGHHHHHHHTSG
T ss_pred ----HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 0011111110 1112478999999998877653
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=7.1e-09 Score=112.93 Aligned_cols=195 Identities=11% Similarity=0.068 Sum_probs=126.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH----HHhhhcCcccCCCe-EEEEccCCCCCCCCCHHHHHHhc------CCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF----DRLRKENANFTERI-VVLTADLQSDGLGLDEKEKKVLR------EDVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf----d~Lr~~~p~~~~kI-~~V~GDl~d~~LGLs~edl~~L~------~~VD 75 (1217)
.-+||+.+.-|..+.++|.+.... .+. +.+.+...+...++ .++.+|++++ ++++.++ .++|
T Consensus 14 vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 14 AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDA------EAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCH------HHHHHHHHHHHHHSCCC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCH------HHHHHHHHHHHhhCCCc
Confidence 457899999999999999874221 111 11111101112345 8899999997 7776665 5789
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+|||+||..... +.++..+++|+.|+.++++.+... .+..+||++||..++... |.
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~---- 153 (254)
T 2wsb_A 88 ILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN----------RP---- 153 (254)
T ss_dssp EEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------SS----
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC----------CC----
Confidence 999999975431 224578899999988777765321 246799999998664321 00
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
.....|+.||+..|.+++.++ .++++.++||+.|+++.....+ ...
T Consensus 154 ----------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~ 204 (254)
T 2wsb_A 154 ----------------------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-------ERP 204 (254)
T ss_dssp ----------------------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-------TCH
T ss_pred ----------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-------cCh
Confidence 001469999999999987654 4899999999999987432110 001
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.....+..+ .....+++++|+|++++.++..
T Consensus 205 ~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 235 (254)
T 2wsb_A 205 ELFETWLDM---------TPMGRCGEPSEIAAAALFLASP 235 (254)
T ss_dssp HHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCc
Confidence 122222221 1124588999999999887754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.7e-08 Score=110.39 Aligned_cols=193 Identities=10% Similarity=0.037 Sum_probs=126.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|..+.++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 10 vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE------SDVINLVQSAIKEF 83 (261)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCH------HHHHHHHHHHHHHc
Confidence 4578999999999999998742110 01111111111234688999999997 77776665
Q ss_pred -CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF----D---EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f----~---e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
++|+|||+||.... + +.++..+++|+.|+.++++.+.+. .+ ..++|++||...+.. .+
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~ 153 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP----------WP 153 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC----------CT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC----------CC
Confidence 78999999997542 1 234578999999999988877542 12 569999999754321 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+.+.++ .++++.++||+.|+++....
T Consensus 154 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------- 198 (261)
T 1gee_A 154 ----------------------------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE------- 198 (261)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH-------
T ss_pred ----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhh-------
Confidence 01369999998888776653 58999999999998874311
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
..........+... .....+++++|+|++++.++..
T Consensus 199 ~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~ 234 (261)
T 1gee_A 199 KFADPEQRADVESM---------IPMGYIGEPEEIAAVAAWLASS 234 (261)
T ss_dssp HHHSHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSG
T ss_pred cccChhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCc
Confidence 00001111122111 1123578999999999887754
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.85 E-value=6e-09 Score=112.73 Aligned_cols=189 Identities=13% Similarity=0.080 Sum_probs=120.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEE-EEccCCCCCCCCCHHHHHHhc-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVV-LTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~-V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
-+||+.+.-|..+.++|.+..... -.+.+.++......++.. +.+|++++ ++++.++
T Consensus 5 lITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 5 LITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA------EAATALVHQAAEVL 78 (245)
T ss_dssp EETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSH------HHHHHHHHHHHHHH
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCH------HHHHHHHHHHHHhc
Confidence 367888888888888887632110 011111111111235666 89999997 7776664
Q ss_pred CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHH----hHhcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 72 EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKM----AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLel----Ak~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.++|+|||+||.... .+.++..+++|+.|+.++++. +++ .+..+||++||...+... +
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~~----------~ 147 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK-ARFGRIVNITSVVGILGN----------P 147 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCTHHHHCC----------S
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh-cCCCEEEEEeChhhccCC----------C
Confidence 479999999997542 123457899999996555544 444 256799999997543210 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+.+.++ .++++.++||+.++++.....+
T Consensus 148 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----- 194 (245)
T 2ph3_A 148 ----------------------------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP----- 194 (245)
T ss_dssp ----------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-----
T ss_pred ----------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC-----
Confidence 01369999999888877654 4899999999999886432110
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......+..+. ....+++++|+|++++.++..
T Consensus 195 ----~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~ 226 (245)
T 2ph3_A 195 ----QEVKEAYLKQI---------PAGRFGRPEEVAEAVAFLVSE 226 (245)
T ss_dssp ----HHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHTSG
T ss_pred ----HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCc
Confidence 11222222221 124588999999999887654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-08 Score=111.03 Aligned_cols=199 Identities=11% Similarity=0.065 Sum_probs=127.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH--------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD--------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd--------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|..+.++|.+...+ .+.+ .+.+.......++.++.+|++++ ++++.+++
T Consensus 17 vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 17 IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT------DIVTKTIQQIDADL 90 (265)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCH------HHHHHHHHHHHHHS
T ss_pred EEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCH------HHHHHHHHHHHHhc
Confidence 347899988999999999873211 0111 11110011235789999999997 66665543
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++++... +...+||++||..++..... + ..+
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--~---~~~ 165 (265)
T 1h5q_A 91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS--S---LNG 165 (265)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE--E---TTE
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc--c---ccc
Confidence 489999999975321 234578999999999999988642 22468999999765432110 0 000
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
......|+.||+..|.+++.++ .++++.++||+.|.++.....
T Consensus 166 --------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------ 213 (265)
T 1h5q_A 166 --------------------------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM------ 213 (265)
T ss_dssp --------------------------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS------
T ss_pred --------------------------cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc------
Confidence 0001469999999999987654 489999999999988753221
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. .......... .....+++++|+|++++.++...
T Consensus 214 -~--~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~ 247 (265)
T 1h5q_A 214 -D--KKIRDHQASN---------IPLNRFAQPEEMTGQAILLLSDH 247 (265)
T ss_dssp -C--HHHHHHHHHT---------CTTSSCBCGGGGHHHHHHHHSGG
T ss_pred -c--hhHHHHHHhc---------CcccCCCCHHHHHHHHHhhccCc
Confidence 0 1111111111 11234789999999998877543
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.6e-08 Score=112.92 Aligned_cols=205 Identities=14% Similarity=0.115 Sum_probs=127.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|....++|.+.... ...+.+.++... ...++.++.+|++++ ++++.+++
T Consensus 28 ~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 28 AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKP------SEIADMMAMVADR 101 (281)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCH------HHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCH------HHHHHHHHHHHHH
Confidence 348999999999999999874321 111112221111 245789999999998 77776664
Q ss_pred --CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 --DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 --~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+||..... +.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 171 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS----------P 171 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC----------C
Confidence 789999999975321 234578999999999999987321 244689999997653211 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|.++....... .
T Consensus 172 ----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~---~ 220 (281)
T 3v2h_A 172 ----------------------------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIP---D 220 (281)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcc---h
Confidence 01369999999998887654 58999999999998875432110 0
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.....+.. ..........++.....++.++|+|++++.++....
T Consensus 221 ~~~~~~~~---~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a 264 (281)
T 3v2h_A 221 QARTRGIT---EEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDA 264 (281)
T ss_dssp ----------------------CCTTCSCBCHHHHHHHHHHHHSSGG
T ss_pred hhhhcCCC---HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCc
Confidence 00000000 000001112234455779999999999988776543
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.4e-08 Score=109.81 Aligned_cols=203 Identities=11% Similarity=0.029 Sum_probs=129.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-h----------------H---HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHH
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-A----------------F---DRLRKENANFTERIVVLTADLQSDGLGLDEKEKK 68 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-v----------------f---d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~ 68 (1217)
-+||+.+.-|....++|.+..... + - +.+.+.......++.++.+|++++ ++++
T Consensus 14 lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~ 87 (281)
T 3s55_A 14 LITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR------AALE 87 (281)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHH
T ss_pred EEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH------HHHH
Confidence 478888888999999988743211 0 1 111111122345789999999998 7777
Q ss_pred HhcC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccc
Q psy13944 69 VLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKK 131 (1217)
Q Consensus 69 ~L~~-------~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~ 131 (1217)
.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...+...
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 165 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN-- 165 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC--
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC--
Confidence 7665 78999999997532 1235678999999999999986431 244689999997654221
Q ss_pred ccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 132 IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 132 I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
+ ....|+.||+..+.+.+.++ .++.+..++|+.|.++..
T Consensus 166 --------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 166 --------F----------------------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp --------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred --------C----------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence 0 01369999999998887654 589999999999999865
Q ss_pred CCCc---ccccccchh-HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 207 EPCP---MWVKGMNGL-TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 207 eP~p---GWidn~~g~-~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.+.. .+......+ ..-...... .......+++.++|+|++++.++....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~p~dvA~~v~~L~s~~~ 262 (281)
T 3s55_A 210 HNDFVFGTMRPDLEKPTLKDVESVFA-------SLHLQYAPFLKPEEVTRAVLFLVDEAS 262 (281)
T ss_dssp SSHHHHHC-------CCHHHHHHHHH-------HHCSSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred cchhhhccccccccccchhHHHHHHH-------hhhccCcCCCCHHHHHHHHHHHcCCcc
Confidence 3210 000000000 000000000 011222678999999999998876543
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.7e-08 Score=111.66 Aligned_cols=194 Identities=13% Similarity=0.094 Sum_probs=124.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+.... ...+.+.++......++.++.+|++++ ++++.+++
T Consensus 29 vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 29 VLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNA------ADIAAMFSAVDRQF 102 (272)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHhC
Confidence 447899999999999999873221 111222222222345789999999998 77776654
Q ss_pred -CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHhHhc------CCCCeEEEEcCccccccccccccccc
Q psy13944 73 -DVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEEM------KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~--------e~l~~a~~vNV~GT~~LLelAk~~------~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++++... .+-.++|++||...+...
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 174 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS-------- 174 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC--------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC--------
Confidence 679999999986431 234578999999999999888642 124579999997653210
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
+ .....|+.||+..|.+++.++ .++.+.+++|+.|.++.....
T Consensus 175 --~---------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--- 222 (272)
T 4e3z_A 175 --A---------------------------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--- 222 (272)
T ss_dssp --T---------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------
T ss_pred --C---------------------------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc---
Confidence 0 001359999999998876654 489999999999988743210
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.......... .......+..++|+|++++.++...
T Consensus 223 -----~~~~~~~~~~---------~~~~~~~~~~~edvA~~i~~l~s~~ 257 (272)
T 4e3z_A 223 -----GLPDRAREMA---------PSVPMQRAGMPEEVADAILYLLSPS 257 (272)
T ss_dssp -------------------------CCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred -----CChHHHHHHh---------hcCCcCCCcCHHHHHHHHHHHhCCc
Confidence 0001111111 1122234677999999999877543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.79 E-value=2e-08 Score=108.41 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=57.5
Q ss_pred cE-EEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 550 RI-VVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 550 kV-~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
++ +++.+|++ .. +...+.++|+|||+||.... ..+...+++|+.|+.+++++|++. ++++||++||..+
T Consensus 65 ~~~~~~~~Dl~-~~-------~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~ 134 (236)
T 3e8x_A 65 GASDIVVANLE-ED-------FSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGT 134 (236)
T ss_dssp TCSEEEECCTT-SC-------CGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTC
T ss_pred CCceEEEcccH-HH-------HHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCC
Confidence 57 89999999 32 45566899999999997653 567788999999999999999987 6899999999543
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=2.7e-08 Score=109.50 Aligned_cols=189 Identities=19% Similarity=0.169 Sum_probs=125.7
Q ss_pred CcccCCC--CCCcccHHHHHHHHhcC-------h----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 8 LGHNGAK--TCKHNSILWVAKDFFAD-------D----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 8 ~g~tg~r--~kkg~~~~eRL~~~l~~-------~----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
.-+||+. +.-|....++|.+.... . ..+.+.++ ..++.++.+|++++ ++++.+++
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~----~~~~~~~~~D~~~~------~~v~~~~~~~ 80 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA----LGGALLFRADVTQD------EELDALFAGV 80 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHH----TTCCEEEECCTTCH------HHHHHHHHHH
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh----cCCcEEEECCCCCH------HHHHHHHHHH
Confidence 4478887 78889999999874221 1 11112111 13478999999998 77776655
Q ss_pred -----CccEEEEcCccCCc--------c---cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccccccc
Q psy13944 73 -----DVNIVFHVAATVKF--------D---EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 73 -----~VDiViH~AA~v~f--------~---e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
.+|+|||+||.... + +.++..+++|+.|+.++++++.+. ..-.++|++||...+...
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------ 154 (261)
T 2wyu_A 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV------ 154 (261)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC------
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC------
Confidence 68999999997542 1 234578999999999999999763 111489999997653210
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
+ ....|+.||+..|.+.+.++ .++.+.+++|+.|.++.....+
T Consensus 155 ----~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~ 202 (261)
T 2wyu_A 155 ----P----------------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP 202 (261)
T ss_dssp ----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT
T ss_pred ----C----------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc
Confidence 0 01369999999999887654 4899999999999987532211
Q ss_pred ccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 211 GWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
........+..+. ....+..++|+|++++.++..
T Consensus 203 -------~~~~~~~~~~~~~---------p~~~~~~~~dva~~v~~l~s~ 236 (261)
T 2wyu_A 203 -------GFTKMYDRVAQTA---------PLRRNITQEEVGNLGLFLLSP 236 (261)
T ss_dssp -------THHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSG
T ss_pred -------ccHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCh
Confidence 1111222221110 112367899999999887754
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.6e-08 Score=107.62 Aligned_cols=200 Identities=14% Similarity=0.117 Sum_probs=128.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... +. +.+.+.......++.++.+|++++ ++++.+++ ++|
T Consensus 15 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~------~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 15 AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKR------ASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCH------HHHHHHHHHHHHHHTCCC
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCH------HHHHHHHHHHHHHcCCCC
Confidence 4489999999999999998743221 11 111111112223788999999998 77777765 799
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+||..... +.++..+++|+.|+.++++++... .+ ..++|++||...+... |
T Consensus 89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~---- 154 (263)
T 3ak4_A 89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA----------P---- 154 (263)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------T----
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC----------C----
Confidence 999999975321 235578999999999999887642 12 5799999997653210 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc---cccc
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW---VKGM 216 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW---idn~ 216 (1217)
....|+.||+..|.+.+.++ .++++.++||+.|.++.......+ ....
T Consensus 155 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 210 (263)
T 3ak4_A 155 ------------------------LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGM 210 (263)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTS
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhcccccccccc
Confidence 01369999999998887654 589999999999988632110000 0000
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
........+..+ .....+++++|+|++++.++...
T Consensus 211 -~~~~~~~~~~~~---------~p~~~~~~~~dvA~~v~~l~s~~ 245 (263)
T 3ak4_A 211 -TPEAVRAEYVSL---------TPLGRIEEPEDVADVVVFLASDA 245 (263)
T ss_dssp -CHHHHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred -CcHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcc
Confidence 001111111111 12245899999999998887543
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=2.6e-08 Score=113.91 Aligned_cols=56 Identities=13% Similarity=0.238 Sum_probs=48.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
.+++++.||++|+ +++..+++ ++|+|||+||.. |+.|+.+|+++|++.+.+++||+
T Consensus 60 ~~v~~~~~Dl~d~------~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 60 KGAIIVYGLINEQ------EAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp TTCEEEECCTTCH------HHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC
T ss_pred CCcEEEEeecCCH------HHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee
Confidence 4689999999974 57888888 999999999973 89999999999999843999986
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=7.8e-09 Score=113.81 Aligned_cols=201 Identities=14% Similarity=0.098 Sum_probs=128.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHh---hhcCccc-CCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRL---RKENANF-TERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~L---r~~~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... +. +.+ .++.... ..++.++.+|++++ ++++.+++
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 10 AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP------EGVDAVVESVRSSF 83 (263)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSH------HHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 4488999999999999998742211 11 111 1111111 34789999999998 77777665
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||..++....
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 152 (263)
T 3ai3_A 84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW----------- 152 (263)
T ss_dssp SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----------
Confidence 78999999997532 1235578999999999998887531 2457999999987654210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCC-cccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPC-PMWVKG 215 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~-pGWidn 215 (1217)
....|+.||+..|.+.+.++ .++++.++||+.|+++..... +.+...
T Consensus 153 ---------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~ 205 (263)
T 3ai3_A 153 ---------------------------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKD 205 (263)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTT
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcc
Confidence 01369999999998887654 589999999999988742110 000000
Q ss_pred cch-hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNG-LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g-~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
... .......+..+. .....+++++|+|++++.++..
T Consensus 206 ~~~~~~~~~~~~~~~~--------~p~~~~~~~~dvA~~~~~l~s~ 243 (263)
T 3ai3_A 206 NGGDWKGYLQSVADEH--------APIKRFASPEELANFFVFLCSE 243 (263)
T ss_dssp TTCCHHHHHHHHHHHH--------CTTCSCBCHHHHHHHHHHHTST
T ss_pred cCCcHHHHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHcCc
Confidence 000 011111111110 1123589999999999877653
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.1e-08 Score=112.02 Aligned_cols=213 Identities=15% Similarity=0.101 Sum_probs=130.6
Q ss_pred CcccCCCCCCcccHHHHHHH-HhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKD-FFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~-~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|..+.++|.+ ..... + .+.+.++......++.++.+|++++ ++++.+++
T Consensus 7 vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 7 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL------QSIRALRDFLRKEY 80 (276)
T ss_dssp EEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCH------HHHHHHHHHHHHhc
Confidence 44789999999999999987 22211 0 1111111111135789999999997 77777665
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccc----cccccccCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIK----KIEEKFYEP 139 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~----~I~E~~y~~ 139 (1217)
++|+|||+||.... .+.++..+++|+.|+.++++++.+. ....++|++||..++.... ...+.....
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE 160 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence 78999999997532 2335678999999999999999763 1124899999987653210 011111111
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCC-ChHHHHHHHHHHHHHHhc---------CCCCEEEEecceeccCCCCCC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMP-NTYTLSKNACEQMVREKM---------DKLPLGIVRPSIVMPVVEEPC 209 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~---------~gLPvvIvRPsiV~G~~~eP~ 209 (1217)
+.+.+.+........++......+ ...+| +.|+.||+..|.+++.++ .++.+.+++|+.|.++....
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~- 237 (276)
T 1wma_A 161 TITEEELVGLMNKFVEDTKKGVHQ--KEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP- 237 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTCTT--TTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-
T ss_pred ccchhhhhhhhhhhhhhhcccccc--cCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-
Confidence 222222211111000000000000 11222 689999999998887653 27999999999887653210
Q ss_pred cccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 210 PMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 210 pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..++.++++|++++.++..+
T Consensus 238 --------------------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 --------------------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp --------------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred --------------------------------cccCChhHhhhhHhhhhcCc
Confidence 13689999999999888643
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.77 E-value=3.2e-08 Score=110.40 Aligned_cols=192 Identities=11% Similarity=0.089 Sum_probs=124.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
.-+||+.+.-|..+.++|.+..... -.+.+.++......++.++.+|++++ ++++.++ .
T Consensus 47 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 47 ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK------EEISEVINKILTEHK 120 (285)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCH------HHHHHHHHHHHHHCS
T ss_pred EEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCH------HHHHHHHHHHHHhcC
Confidence 4478998888888888887632111 11111111112235788999999998 7777665 4
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
++|+|||+||..... +.++..+++|+.|+.++++.+... .+..+||++||..++... +
T Consensus 121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~-- 188 (285)
T 2c07_A 121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----------V-- 188 (285)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T--
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------C--
Confidence 689999999975321 235578999999988888777531 245799999998653211 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..|.+++.++ .++++.++||+.|.++.....+
T Consensus 189 --------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~------- 235 (285)
T 2c07_A 189 --------------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS------- 235 (285)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-------
T ss_pred --------------------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC-------
Confidence 01369999999988876654 5899999999999887432211
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.......... .....++.++|+|++++.++...
T Consensus 236 --~~~~~~~~~~---------~~~~~~~~~~dvA~~~~~l~~~~ 268 (285)
T 2c07_A 236 --EQIKKNIISN---------IPAGRMGTPEEVANLACFLSSDK 268 (285)
T ss_dssp --HHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGG
T ss_pred --HHHHHHHHhh---------CCCCCCCCHHHHHHHHHHHhCCC
Confidence 1111222221 11134889999999998877543
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.2e-08 Score=110.42 Aligned_cols=185 Identities=14% Similarity=0.148 Sum_probs=124.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+.....+ -+.+.+...+...++.++.+|++++ ++++.+++ ++|
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD 83 (260)
T 1nff_A 10 ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQP------AQWKAAVDTAVTAFGGLH 83 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCH------HHHHHHHHHHHHHcCCCC
Confidence 34889999999999999987422111 1111111111223588999999998 77777766 799
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+||.... .+.++..+++|+.|+.++++.+ ++ .+..++|++||..++... |
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~----------~---- 148 (260)
T 1nff_A 84 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE-AGRGSIINISSIEGLAGT----------V---- 148 (260)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCC----------T----
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEEeehhhcCCC----------C----
Confidence 99999997542 1235578999999997666654 33 245799999998664321 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||+..|.+.+..+ .++++.++||+.|+++... +...
T Consensus 149 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~---- 196 (260)
T 1nff_A 149 ------------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----WVPE---- 196 (260)
T ss_dssp ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----TSCT----
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc----cchh----
Confidence 01369999999999887654 5899999999999987432 1000
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. .. ......++.++|+|++++.++..
T Consensus 197 ---------~-~~-----~~~~~~~~~~~dvA~~v~~l~s~ 222 (260)
T 1nff_A 197 ---------D-IF-----QTALGRAAEPVEVSNLVVYLASD 222 (260)
T ss_dssp ---------T-CS-----CCSSSSCBCHHHHHHHHHHHHSG
T ss_pred ---------h-HH-----hCccCCCCCHHHHHHHHHHHhCc
Confidence 0 00 01123578899999999887754
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.1e-08 Score=110.05 Aligned_cols=191 Identities=12% Similarity=0.104 Sum_probs=122.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHH----hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDR----LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~----Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... +.++ +.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 10 ~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 10 FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNE------ADATAALAFAKQEFGHVH 83 (257)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCH------HHHHHHHHHHHHHcCCCC
Confidence 3478999999999999998743321 1111 1111112234688999999998 77777665 789
Q ss_pred EEEEcCccCCc--------c---cCHHHHHHHHHHHHHHHHHHhHhc-C--------CCCeEEEEcCccccccccccccc
Q psy13944 76 IVFHVAATVKF--------D---EHFQTAFEINCKGTEKLLKMAEEM-K--------NLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 76 iViH~AA~v~f--------~---e~l~~a~~vNV~GT~~LLelAk~~-~--------~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
++||+||.... + +.++..+++|+.|+.++++++... . +-.++|++||...+...
T Consensus 84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~------ 157 (257)
T 3tpc_A 84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ------ 157 (257)
T ss_dssp EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC------
T ss_pred EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC------
Confidence 99999997532 1 335578999999999999998753 1 23579999997654221
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
+ ....|+.||+..+.+.+.++ .++++..++|+.|.++.....+
T Consensus 158 ----~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 205 (257)
T 3tpc_A 158 ----I----------------------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP 205 (257)
T ss_dssp ----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------
T ss_pred ----C----------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC
Confidence 0 01369999999998876543 5899999999999887532211
Q ss_pred ccccccchhHHHHHHHhcCceeEEeeCCCce-eccccHHHHHHHHHHHHHh
Q psy13944 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNI-VDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 211 GWidn~~g~~~li~~~~~G~l~~i~g~~~~~-~D~VpVDdVvnAii~aa~~ 260 (1217)
. .....+.. .... ..+..++|++++++.++..
T Consensus 206 ~---------~~~~~~~~---------~~p~~~r~~~~~dva~~v~~l~s~ 238 (257)
T 3tpc_A 206 Q---------DVQDALAA---------SVPFPPRLGRAEEYAALVKHICEN 238 (257)
T ss_dssp -----------------C---------CSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred H---------HHHHHHHh---------cCCCCCCCCCHHHHHHHHHHHccc
Confidence 0 11111111 1111 3578899999999888754
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.76 E-value=5.4e-08 Score=107.97 Aligned_cols=206 Identities=16% Similarity=0.094 Sum_probs=131.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-----------------HHHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHH
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-----------------FDRL---RKENANFTERIVVLTADLQSDGLGLDEKEK 67 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-----------------fd~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl 67 (1217)
.-+||+.+.-|....++|.+.....+ -+.+ .+.......++.++.+|++++ +++
T Consensus 16 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v 89 (278)
T 3sx2_A 16 AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR------ESL 89 (278)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH------HHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH------HHH
Confidence 34889988889999999887432211 1111 111112346899999999998 777
Q ss_pred HHhcC-------CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCccccccccccc
Q psy13944 68 KVLRE-------DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIE 133 (1217)
Q Consensus 68 ~~L~~-------~VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~ 133 (1217)
+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... +.-.++|++||........
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 166 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG--- 166 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC---
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc---
Confidence 77665 789999999986543 345688999999999999987542 2235899999976543210
Q ss_pred ccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCC
Q psy13944 134 EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEP 208 (1217)
Q Consensus 134 E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP 208 (1217)
.+ .+. ...|+.||+..+.+.+.++ .++.+..++|+.|.++....
T Consensus 167 -----~~-~~~-------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 215 (278)
T 3sx2_A 167 -----SA-DPG-------------------------SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN 215 (278)
T ss_dssp -----CS-SHH-------------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred -----cC-CCC-------------------------chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh
Confidence 00 000 0359999999998887654 57999999999998875432
Q ss_pred CcccccccchhHHHHHHH-hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 209 CPMWVKGMNGLTAMYVAV-GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 209 ~pGWidn~~g~~~li~~~-~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
. .....+... .........++... ..++.++|+|++++.++....
T Consensus 216 ~--------~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~ 261 (278)
T 3sx2_A 216 E--------FTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQA 261 (278)
T ss_dssp H--------HHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGG
T ss_pred h--------hHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCccc
Confidence 0 011111111 11111111122222 578899999999988775433
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.9e-08 Score=109.38 Aligned_cols=201 Identities=16% Similarity=0.131 Sum_probs=128.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh---------------------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHH
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD---------------------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEK 67 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~---------------------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl 67 (1217)
-+||+.+.-|....++|.+...+. -.+.+.++....-.++.++.+|++++ +++
T Consensus 19 lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v 92 (280)
T 3pgx_A 19 FITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD------AAL 92 (280)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH------HHH
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHH
Confidence 478888888899999988742211 11122222223346789999999998 777
Q ss_pred HHhcC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCccccccc
Q psy13944 68 KVLRE-------DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNI 129 (1217)
Q Consensus 68 ~~L~~-------~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~ 129 (1217)
+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... +.-.++|++||...+...
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 172 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT 172 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence 76654 789999999986421 234578999999999999987431 224579999997653221
Q ss_pred ccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 130 KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 130 ~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
+ ....|+.||+..+.+.+..+ .++.+..++|+.|.++
T Consensus 173 ----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 214 (280)
T 3pgx_A 173 ----------P----------------------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETP 214 (280)
T ss_dssp ----------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCST
T ss_pred ----------C----------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCc
Confidence 0 01369999999998887654 5899999999999887
Q ss_pred CCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 205 VEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 205 ~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
...+. .....+..... ....+.........++.++|+|++++.++....
T Consensus 215 ~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~ 263 (280)
T 3pgx_A 215 MIEPE--------AMMEIFARHPS-FVHSFPPMPVQPNGFMTADEVADVVAWLAGDGS 263 (280)
T ss_dssp TCCHH--------HHHHHHHHCGG-GGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGG
T ss_pred ccchh--------hhhhhhhcCch-hhhhhhhcccCCCCCCCHHHHHHHHHHHhCccc
Confidence 54320 00011110000 000000001111238899999999988776544
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.8e-08 Score=110.69 Aligned_cols=194 Identities=11% Similarity=0.094 Sum_probs=129.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+.... ...+.+.+.......++.++.+|++++ ++++.+++
T Consensus 10 vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 10 ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK------EDLHKIVEEAMSHF 83 (264)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHHHHHHHh
Confidence 447999999999999999874221 112233333333346799999999998 77777665
Q ss_pred -CccEEEEcCccC-----Ccc----cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccC
Q psy13944 73 -DVNIVFHVAATV-----KFD----EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 -~VDiViH~AA~v-----~f~----e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|+|||+||.. .+. +.++..+++|+.|+.++++++ ++ .+..++|++||..+.+...
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~-------- 154 (264)
T 3i4f_A 84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK-QNFGRIINYGFQGADSAPG-------- 154 (264)
T ss_dssp SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCTTGGGCCC--------
T ss_pred CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh-cCCCeEEEEeechhcccCC--------
Confidence 789999999942 111 234578999999999999988 44 2457899999975432110
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
. .....|+.||+..|.+.+.++ .++++.+++|+.|.++......
T Consensus 155 ~----------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--- 203 (264)
T 3i4f_A 155 W----------------------------IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--- 203 (264)
T ss_dssp C----------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---
T ss_pred C----------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---
Confidence 0 011369999999998887654 5899999999999987543211
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
........ .......+..++|+|++++.++....
T Consensus 204 ------~~~~~~~~---------~~~p~~r~~~~~dva~~v~~l~s~~~ 237 (264)
T 3i4f_A 204 ------QEARQLKE---------HNTPIGRSGTGEDIARTISFLCEDDS 237 (264)
T ss_dssp ------HHHHHC-----------------CCCCHHHHHHHHHHHHSGGG
T ss_pred ------HHHHHHHh---------hcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 11111111 01122347889999999998876543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=3.2e-08 Score=108.65 Aligned_cols=193 Identities=14% Similarity=0.089 Sum_probs=126.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... + .+.+.++......++.++.+|++++ ++++.+++
T Consensus 17 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 17 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA------EDRERLVAMAVNLHG 90 (260)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH------HHHHHHHHHHHHHcC
Confidence 3478999999999999998742211 0 1111111111234688999999997 77766654
Q ss_pred CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||.... . +.++..+++|+.|+.++++++... .+..++|++||..++....
T Consensus 91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 159 (260)
T 2zat_A 91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP----------- 159 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC-----------
Confidence 78999999996431 1 234578999999999998887521 3567999999987643210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|.++.... .|.+
T Consensus 160 ---------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~-- 208 (260)
T 2zat_A 160 ---------------------------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV--LWMD-- 208 (260)
T ss_dssp ---------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH--HHSS--
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh--cccC--
Confidence 01369999999999887654 58999999999988764211 0110
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......+..+ .....+++++|+|++++.++..
T Consensus 209 ---~~~~~~~~~~---------~~~~~~~~~~dva~~v~~l~s~ 240 (260)
T 2zat_A 209 ---KARKEYMKES---------LRIRRLGNPEDCAGIVSFLCSE 240 (260)
T ss_dssp ---HHHHHHHHHH---------HTCSSCBCGGGGHHHHHHHTSG
T ss_pred ---hHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCc
Confidence 0000111111 1123578999999998877654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.2e-08 Score=111.56 Aligned_cols=190 Identities=13% Similarity=0.082 Sum_probs=107.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+...+. -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 12 vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 12 GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP------ESAKAMADRTLAEFG 85 (253)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSH------HHHHHHHHHHHHHHS
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHcC
Confidence 3478999889999999998743221 11122222222345788999999998 77777665
Q ss_pred CccEEEEcCccCC---c-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 DVNIVFHVAATVK---F-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~---f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|+|||+||... . .+.++..+++|+.|+.++++.+... .+..++|++||..++..
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 154 (253)
T 3qiv_A 86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY----------- 154 (253)
T ss_dssp CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC-----------
Confidence 7899999999731 1 1234578999999976666655321 24568999999865411
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
...|+.||+..|.+.+.++ .++.+..++|+.|.++......
T Consensus 155 ------------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---- 200 (253)
T 3qiv_A 155 ------------------------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT---- 200 (253)
T ss_dssp -----------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------
T ss_pred ------------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC----
Confidence 1359999999998887654 5799999999999887532210
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
+..+...+..+ .....+..++|++++++.++...
T Consensus 201 ----~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~ 234 (253)
T 3qiv_A 201 ----PKEMVDDIVKG---------LPLSRMGTPDDLVGMCLFLLSDE 234 (253)
T ss_dssp --------------------------------CCHHHHHHHHHHSGG
T ss_pred ----cHHHHHHHhcc---------CCCCCCCCHHHHHHHHHHHcCcc
Confidence 11111111111 11233567899999998877543
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.74 E-value=5.2e-08 Score=106.00 Aligned_cols=193 Identities=9% Similarity=0.042 Sum_probs=128.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 8 vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 8 ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI------ESIQNFFAEIKAENL 81 (247)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHTTC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHHHHHHHcC
Confidence 4488998888999999998743211 11222222222345789999999998 77766654
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||...+... |
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 149 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN----------P-- 149 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T--
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC----------C--
Confidence 57999999997632 1235578999999999999887542 234589999997653211 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..|.+.+.++ .++++..++|+.|..+.....+
T Consensus 150 --------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------- 196 (247)
T 3lyl_A 150 --------------------------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT------- 196 (247)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC-------
T ss_pred --------------------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc-------
Confidence 01369999998777776543 5899999999999877543221
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
......... ......+.+++|+|++++.++....
T Consensus 197 --~~~~~~~~~---------~~~~~~~~~~~dva~~i~~l~s~~~ 230 (247)
T 3lyl_A 197 --DEQKSFIAT---------KIPSGQIGEPKDIAAAVAFLASEEA 230 (247)
T ss_dssp --HHHHHHHHT---------TSTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred --HHHHHHHhh---------cCCCCCCcCHHHHHHHHHHHhCCCc
Confidence 111111222 1233568899999999988775433
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.74 E-value=6.9e-08 Score=107.09 Aligned_cols=193 Identities=19% Similarity=0.135 Sum_probs=130.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHH----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFD----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... +.+ .+.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 14 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 14 AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNE------VSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCH------HHHHHHHHHHHHHcCCCC
Confidence 3489999999999999998743221 111 01111111235788999999998 77777765 789
Q ss_pred EEEEcCccCCc------c---cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 76 IVFHVAATVKF------D---EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 76 iViH~AA~v~f------~---e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
++||+||.... + +.++..+++|+.|+.++++++ ++ .+..++|++||...+....
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iv~isS~~~~~~~~------------ 154 (271)
T 3tzq_B 88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS-AGGGAIVNISSATAHAAYD------------ 154 (271)
T ss_dssp EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEEEEECCGGGTSBCS------------
T ss_pred EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEEEEECCHHHcCCCC------------
Confidence 99999997632 1 234578999999999999998 44 3457999999976543210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..|.+.+..+ .++.+..++|+.|.++.... ..
T Consensus 155 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~------~~- 201 (271)
T 3tzq_B 155 --------------------------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV------GL- 201 (271)
T ss_dssp --------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----------
T ss_pred --------------------------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc------cC-
Confidence 01369999999998887654 58999999999999875431 01
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
+......+... .....+...+|+|++++.++....
T Consensus 202 -~~~~~~~~~~~---------~~~~r~~~p~dvA~~v~~L~s~~~ 236 (271)
T 3tzq_B 202 -PQPIVDIFATH---------HLAGRIGEPHEIAELVCFLASDRA 236 (271)
T ss_dssp -CHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred -CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccc
Confidence 11222222222 112236789999999988776543
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.73 E-value=4.4e-09 Score=111.18 Aligned_cols=73 Identities=14% Similarity=-0.001 Sum_probs=58.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc-hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f-~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+++++.+|+++++ +++.++ +|+|||+|+.... ....+..+++|+.|+.+++++|++. ++++|||+||..
T Consensus 46 ~~~~~~~~D~~~~~------~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~ 116 (215)
T 2a35_A 46 PRLDNPVGPLAELL------PQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALG 116 (215)
T ss_dssp TTEECCBSCHHHHG------GGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTT
T ss_pred CCceEEeccccCHH------HHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcc
Confidence 36888899998743 334444 8999999997653 3456678899999999999999987 788999999988
Q ss_pred eec
Q psy13944 628 SNC 630 (1217)
Q Consensus 628 v~g 630 (1217)
+++
T Consensus 117 ~~~ 119 (215)
T 2a35_A 117 ADA 119 (215)
T ss_dssp CCT
T ss_pred cCC
Confidence 765
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.73 E-value=3.2e-08 Score=108.83 Aligned_cols=194 Identities=12% Similarity=0.082 Sum_probs=129.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 15 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 15 AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE------QHREAVIKAALDQFG 88 (256)
T ss_dssp EEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 3479999999999999998743321 11122222222346789999999998 77776664
Q ss_pred CccEEEEcCccCCc---c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 DVNIVFHVAATVKF---D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.+|++||+||.... + +.++..+++|+.|+.++++++... .+-.++|++||...+... +
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--- 155 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN----------V--- 155 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC----------T---
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC----------C---
Confidence 78999999997532 2 234578999999999999987431 344699999997653211 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+.++ .++.+..++|+.|..+.... ..
T Consensus 156 -------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-------~~- 202 (256)
T 3gaf_A 156 -------------------------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT-------VL- 202 (256)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH-------HC-
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh-------cc-
Confidence 01369999999998887654 57999999999887753211 00
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.......+..+ .....+..++|+|++++.++....
T Consensus 203 ~~~~~~~~~~~---------~p~~r~~~~~dva~~~~~L~s~~~ 237 (256)
T 3gaf_A 203 TPEIERAMLKH---------TPLGRLGEAQDIANAALFLCSPAA 237 (256)
T ss_dssp CHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred CHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCcc
Confidence 01122222222 223457899999999988776433
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=4.9e-08 Score=107.36 Aligned_cols=196 Identities=14% Similarity=0.132 Sum_probs=127.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------- 71 (1217)
.-+||+.+.-|....++|.+...+. + .+.+.++......++.++.+|++++ ++++.++
T Consensus 12 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 12 ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR------SERQELMNTVANHFH 85 (260)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHHHHHHTT
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 3478999999999999998742211 0 1111111111134688999999998 7777665
Q ss_pred CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh---cCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
..+|+|||+||.... .+.++..+++|+.|+.++++++.. ..+..++|++||...+... |
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 154 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV----------P- 154 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------C-
Confidence 579999999997532 123557899999999999998842 1355799999997653210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+.+.++ .++.+.+++|+.+.++.... +...
T Consensus 155 ---------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~- 203 (260)
T 2ae2_A 155 ---------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM---TIQD- 203 (260)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH---HTTS-
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh---hccC-
Confidence 01369999999999987654 48999999999887753110 0000
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......+..+..+ .....+++++|+|++++.++..
T Consensus 204 ~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~v~~l~s~ 238 (260)
T 2ae2_A 204 PEQKENLNKLIDR---------CALRRMGEPKELAAMVAFLCFP 238 (260)
T ss_dssp HHHHHHHHHHHHT---------STTCSCBCHHHHHHHHHHHHSG
T ss_pred hhhHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCc
Confidence 0001111112111 1223588999999998877754
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.72 E-value=6.3e-08 Score=108.02 Aligned_cols=153 Identities=15% Similarity=0.107 Sum_probs=108.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNI 76 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDi 76 (1217)
-+||+.+.-|....++|.+..... + -+.+.+...+...++.++.+|++++ ++++.+++ .+|+
T Consensus 33 lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 33 IVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDE------QQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp EETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCH------HHHHHHHHHHHHHHSSCCE
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCH------HHHHHHHHHHHHHcCCCCE
Confidence 479999999999999998743221 1 1122211122245789999999998 77766654 6899
Q ss_pred EEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 77 VFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 77 ViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
+||+||.... .+.++..+++|+.|+.++++++... .+-.++|++||....... +
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~------ 170 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV----------G------ 170 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------T------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------C------
Confidence 9999998532 1235578999999999999887542 344589999997653210 0
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|.++.
T Consensus 171 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 212 (277)
T 3gvc_A 171 ----------------------GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM 212 (277)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred ----------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence 01369999999998887543 68999999999998763
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.71 E-value=4.6e-08 Score=108.35 Aligned_cols=193 Identities=13% Similarity=0.098 Sum_probs=127.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+.... ...+.+.+.......++.++.+|++++ ++++.+++
T Consensus 32 vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 32 VLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASE------SDFIEAIQTIVQSD 105 (271)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCH------HHHHHHHHHHHHhc
Confidence 347999999999999999874221 111222222223345899999999998 77776664
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||..... +.++..+++|+.|+.++++.+... .+..++|++||....... +
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 174 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN----------M- 174 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T-
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC----------C-
Confidence 789999999986321 235578999999999988877432 244689999997653210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+++.++ .++.+..++|+.|..+.....+.
T Consensus 175 ---------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----- 222 (271)
T 4iin_A 175 ---------------------------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD----- 222 (271)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------
T ss_pred ---------------------------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH-----
Confidence 01369999999998887654 68999999999887764322110
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
... ...........+...+|+|++++.++....
T Consensus 223 ----~~~---------~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~ 255 (271)
T 4iin_A 223 ----ELK---------ADYVKNIPLNRLGSAKEVAEAVAFLLSDHS 255 (271)
T ss_dssp ------------------CGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred ----HHH---------HHHHhcCCcCCCcCHHHHHHHHHHHhCCCc
Confidence 000 011111233457899999999988776543
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.71 E-value=1.2e-08 Score=112.14 Aligned_cols=193 Identities=12% Similarity=0.069 Sum_probs=123.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
.-+||+.+.-|....++|.+..... +. +.+.++ ..+ .++.+|++++ ++++.+++ .
T Consensus 9 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~-~~~~~D~~~~------~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 9 VLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA----IGG-AFFQVDLEDE------RERVRFVEEAAYALGR 77 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHH----HTC-EEEECCTTCH------HHHHHHHHHHHHHHSC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hhC-CEEEeeCCCH------HHHHHHHHHHHHHcCC
Confidence 4478999999999999998743211 11 111111 114 7899999997 77766654 6
Q ss_pred ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|+|||+||..... +.++..+++|+.|+.++++++... .+..++|++||....... |
T Consensus 78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~--- 144 (256)
T 2d1y_A 78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------Q--- 144 (256)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------T---
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------C---
Confidence 89999999975321 234578999999999999887532 345799999997653210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+.++ .++.+.+++|+.|.++.... +......
T Consensus 145 -------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~ 196 (256)
T 2d1y_A 145 -------------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIALSPD 196 (256)
T ss_dssp -------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC----
T ss_pred -------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh---ccccccC
Confidence 01369999999998887654 57899999999886642100 0000000
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.......+ ........+++++|+|++++.++...
T Consensus 197 ~~~~~~~~---------~~~~~~~~~~~~~dvA~~~~~l~s~~ 230 (256)
T 2d1y_A 197 PERTRRDW---------EDLHALRRLGKPEEVAEAVLFLASEK 230 (256)
T ss_dssp ----CHHH---------HTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred CHHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 00000001 11122356899999999998887543
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=9.5e-08 Score=105.99 Aligned_cols=189 Identities=13% Similarity=0.091 Sum_probs=128.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+.-|....++|.+..... ..+.+.++......++.++.+|++++ ++++.+++
T Consensus 32 lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 32 LVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQE------SEVEALFAAVIERWG 105 (269)
T ss_dssp EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH------HHHHHHHHHHHHHHS
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 478999999999999998743221 11222222222345789999999998 77776665
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++||....... +
T Consensus 106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 173 (269)
T 4dmm_A 106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN----------P-- 173 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC----------T--
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC----------C--
Confidence 78999999998632 1235578999999999999987431 244699999997653210 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ .++++..++|+.|..+.....
T Consensus 174 --------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-------- 219 (269)
T 4dmm_A 174 --------------------------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL-------- 219 (269)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH--------
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc--------
Confidence 01369999998877766543 589999999999987643210
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
. ....... .....+..++|+|++++.++..+.
T Consensus 220 ~----~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~~~ 251 (269)
T 4dmm_A 220 A----AEKLLEV---------IPLGRYGEAAEVAGVVRFLAADPA 251 (269)
T ss_dssp H----HHHHGGG---------CTTSSCBCHHHHHHHHHHHHHCGG
T ss_pred c----HHHHHhc---------CCCCCCCCHHHHHHHHHHHhCCcc
Confidence 0 0111111 122357889999999998887633
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.70 E-value=3.6e-08 Score=107.15 Aligned_cols=192 Identities=15% Similarity=0.086 Sum_probs=124.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++... ..++.++.+|++++ ++++.+++
T Consensus 9 vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 9 AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDE------DGWTKLFDATEKAFG 81 (251)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-cCceEEEECCCCCH------HHHHHHHHHHHHHhC
Confidence 4478999999999999998742210 11111111111 15799999999997 77776654
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c--CCC-CeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M--KNL-DSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~--~~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+||..... +.++..+++|+.|+.++.+.+.+ + .+. .+||++||..++... +
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~- 150 (251)
T 1zk4_A 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD----------P- 150 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC----------T-
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC----------C-
Confidence 489999999975321 23457899999988877666532 1 244 689999998664321 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
....|+.||+..|.+++.++ .++++.++||+.|+++.....+
T Consensus 151 ---------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~---- 199 (251)
T 1zk4_A 151 ---------------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP---- 199 (251)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST----
T ss_pred ---------------------------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC----
Confidence 01369999999998886542 4789999999999887432111
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. ........ .......+++++|++++++.++...
T Consensus 200 ---~--~~~~~~~~--------~~~~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T 1zk4_A 200 ---G--AEEAMSQR--------TKTPMGHIGEPNDIAYICVYLASNE 233 (251)
T ss_dssp ---T--HHHHHTST--------TTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred ---c--hhhhHHHh--------hcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 0 00111000 0112235899999999998877543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.70 E-value=8.5e-08 Score=105.12 Aligned_cols=200 Identities=13% Similarity=0.048 Sum_probs=125.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-H-----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-F-----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-f-----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
.-+||+.+.-|....++|.+.....+ . +.+.++......++.++.+|++++ ++++.+++ ++
T Consensus 7 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 7 ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDV------AQIEALFALAEREFGGV 80 (255)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSH------HHHHHHHHHHHHHHSSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCH------HHHHHHHHHHHHHcCCC
Confidence 44789988889999999987422110 1 111111111234688999999998 78877776 79
Q ss_pred cEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|+|||+||.... .+.++..+++|+.|+.++.+.+ ++ .+..++|++||...+... |
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~----------~--- 146 (255)
T 2q2v_A 81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA-RNWGRIINIASVHGLVGS----------T--- 146 (255)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEEECCGGGTSCC----------T---
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEEEEEcCchhccCC----------C---
Confidence 999999997532 1235578999999887776665 34 356799999998654321 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..+.+.+..+ .++.+.++||+.|.++.......-.....+
T Consensus 147 -------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 201 (255)
T 2q2v_A 147 -------------------------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGG 201 (255)
T ss_dssp -------------------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTC
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhccccccccc
Confidence 01369999999998887654 579999999999988632110000000000
Q ss_pred -hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 219 -LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 219 -~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.......+. ........+++++|+|++++.++..
T Consensus 202 ~~~~~~~~~~--------~~~~p~~~~~~~~dvA~~~~~l~s~ 236 (255)
T 2q2v_A 202 DPLQAQHDLL--------AEKQPSLAFVTPEHLGELVLFLCSE 236 (255)
T ss_dssp CHHHHHHHHH--------TTTCTTCCCBCHHHHHHHHHHHTSG
T ss_pred chHHHHHHHH--------hccCCCCCCcCHHHHHHHHHHHhCC
Confidence 000001110 1112234689999999999877654
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.6e-08 Score=109.25 Aligned_cols=195 Identities=10% Similarity=0.016 Sum_probs=119.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+.... +--+.+.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 12 vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 12 ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKE------ADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCH------HHHHHHHHHHHHhcCCCC
Confidence 347899988899999999874321 111222221123346789999999998 77776665 679
Q ss_pred EEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHhHhc-C------CCCeEEEEcCcccccccccccccccCCC
Q psy13944 76 IVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEEM-K------NLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 76 iViH~AA~v~f--------~e~l~~a~~vNV~GT~~LLelAk~~-~------~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
+|||+||.... .+.++..+++|+.|+.++++.+... . ...++|++||...+... |
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~ 155 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR----------P 155 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC----------T
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC----------C
Confidence 99999997542 1234578999999999988887542 0 12369999997653211 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+.+..+ .++.+..++|+.|..+......+ .
T Consensus 156 ----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~ 204 (261)
T 3n74_A 156 ----------------------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMG---E 204 (261)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------
T ss_pred ----------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcc---c
Confidence 01359999999998887654 58999999999988875332110 0
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ..... ...........++.++|+|++++.++..
T Consensus 205 ~--~~~~~---------~~~~~~~~~~~~~~~~dva~~~~~l~s~ 238 (261)
T 3n74_A 205 D--SEEIR---------KKFRDSIPMGRLLKPDDLAEAAAFLCSP 238 (261)
T ss_dssp -----------------------CTTSSCCCHHHHHHHHHHHTSG
T ss_pred C--cHHHH---------HHHhhcCCcCCCcCHHHHHHHHHHHcCC
Confidence 0 00000 0111122334689999999999877753
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1e-07 Score=104.19 Aligned_cols=190 Identities=14% Similarity=0.055 Sum_probs=123.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-h-h---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-D-A---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR----- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~-v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~----- 71 (1217)
.=+||+.+.-|..+.++|.+.... . + .+.+.+..+ ..++.++.+|++++ .++++.++
T Consensus 8 vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~-----~~~~~~~~~~~~~ 80 (254)
T 1sby_A 8 VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP--KVNITFHTYDVTVP-----VAESKKLLKKIFD 80 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT--TSEEEEEECCTTSC-----HHHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC--CceEEEEEEecCCC-----hHHHHHHHHHHHH
Confidence 347888888888888888874322 1 1 111221111 24688999999985 12343333
Q ss_pred --CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhc-CC-----CCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 72 --EDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-KN-----LDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 72 --~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~-~~-----lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.++|+|||+||... .+.++..+++|+.|+.++++++... .. -.++|++||..++... +
T Consensus 81 ~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--- 146 (254)
T 1sby_A 81 QLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----------H--- 146 (254)
T ss_dssp HHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------T---
T ss_pred hcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC----------C---
Confidence 37899999999764 4567889999999999999988642 11 2479999998764321 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+.++ .++.+.+++|+.|.++.......|.....
T Consensus 147 -------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~- 200 (254)
T 1sby_A 147 -------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEP- 200 (254)
T ss_dssp -------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCT-
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhH-
Confidence 01369999999999887654 48999999999998874322222211100
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
.+...... ..+.+++|+|++++.++.
T Consensus 201 ---~~~~~~~~------------~~~~~~~dvA~~i~~~~~ 226 (254)
T 1sby_A 201 ---RVAELLLS------------HPTQTSEQCGQNFVKAIE 226 (254)
T ss_dssp ---THHHHHTT------------SCCEEHHHHHHHHHHHHH
T ss_pred ---HHHHHHhc------------CCCCCHHHHHHHHHHHHH
Confidence 01111111 123489999999988775
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=7.5e-08 Score=106.08 Aligned_cols=195 Identities=13% Similarity=0.038 Sum_probs=129.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+.....+ .+.+.++......++.++.+|++++ ++++.+++
T Consensus 7 vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 7 ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP------AKIKEMFQQIDETF 80 (258)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 34789998899999999987322211 1112222222345799999999998 77776664
Q ss_pred -CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+||.... . +.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~- 149 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL----------E- 149 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC----------C-
Confidence 56999999986422 1 234578999999999999888431 234699999997653210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|..+.....+
T Consensus 150 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~------ 196 (258)
T 3oid_A 150 ---------------------------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP------ 196 (258)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT------
T ss_pred ---------------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc------
Confidence 01469999999999887654 4799999999998876432211
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
...........+ .....+..++|+|++++.++....
T Consensus 197 -~~~~~~~~~~~~---------~p~~r~~~~~dva~~v~~L~s~~~ 232 (258)
T 3oid_A 197 -NREDLLEDARQN---------TPAGRMVEIKDMVDTVEFLVSSKA 232 (258)
T ss_dssp -THHHHHHHHHHH---------CTTSSCBCHHHHHHHHHHHTSSTT
T ss_pred -cCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccc
Confidence 111222222221 112357889999999988776433
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.69 E-value=9.3e-08 Score=105.88 Aligned_cols=192 Identities=10% Similarity=0.067 Sum_probs=124.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... + .+.+.+.......++.++.+|++++ ++++.+++
T Consensus 37 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 37 ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP------KSVEETISQQEKDFG 110 (279)
T ss_dssp EEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCH------HHHHHHHHHHHHHhC
Confidence 3489999999999999998742211 0 1112111111235789999999997 77776654
Q ss_pred CccEEEEcCccCCc------cc---CHHHHHHHHHHH----HHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 DVNIVFHVAATVKF------DE---HFQTAFEINCKG----TEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~f------~e---~l~~a~~vNV~G----T~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|+|||+||.... +. .++..+++|+.| ++.+++.+++. +..+||++||..++... ..
T Consensus 111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~--------~~ 181 (279)
T 3ctm_A 111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSISGKIVN--------IP 181 (279)
T ss_dssp CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCCTTSCC-----------
T ss_pred CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECchHhccCC--------CC
Confidence 48999999997543 11 244788999999 56777777663 56899999998653210 00
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
+ ....|+.||+..|.+++.++ .+ .+.+++|+.|.++.....
T Consensus 182 ~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~----- 227 (279)
T 3ctm_A 182 Q----------------------------LQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA----- 227 (279)
T ss_dssp C----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-----
T ss_pred C----------------------------CcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-----
Confidence 0 01369999999999987754 45 899999999887643210
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. ......+... .....+++++|+|++++.++...
T Consensus 228 --~--~~~~~~~~~~---------~p~~~~~~~~dvA~~~~~l~s~~ 261 (279)
T 3ctm_A 228 --S--KDMKAKWWQL---------TPLGREGLTQELVGGYLYLASNA 261 (279)
T ss_dssp --C--HHHHHHHHHH---------STTCSCBCGGGTHHHHHHHHSGG
T ss_pred --C--hHHHHHHHHh---------CCccCCcCHHHHHHHHHHHhCcc
Confidence 0 1111111111 01134789999999998877543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=4e-08 Score=110.31 Aligned_cols=193 Identities=14% Similarity=0.057 Sum_probs=130.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+.-|....++|.+..... ..+.+.+.......++.++.+|++++ ++++.+++
T Consensus 51 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 51 LITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDE------QHCKDIVQETVRQLG 124 (291)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSH------HHHHHHHHHHHHHHS
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 479999999999999998743221 11122222223345789999999998 77776654
Q ss_pred CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 ~VDiViH~AA~v~f--------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++... ..-.++|++||..++....
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 191 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE------------- 191 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-------------
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-------------
Confidence 68999999997532 1235678999999999999998763 3345899999986643210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+.++ .++.+..++|+.|.++.... .. .
T Consensus 192 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------~~-~ 239 (291)
T 3ijr_A 192 -------------------------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS------SF-D 239 (291)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH------HS-C
T ss_pred -------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc------cC-C
Confidence 01369999999998887654 58999999999998863210 00 0
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
......+.. ......+..++|+|++++.++....
T Consensus 240 -~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~L~s~~~ 273 (291)
T 3ijr_A 240 -EKKVSQFGS---------NVPMQRPGQPYELAPAYVYLASSDS 273 (291)
T ss_dssp -HHHHHHTTT---------TSTTSSCBCGGGTHHHHHHHHSGGG
T ss_pred -HHHHHHHHc---------cCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 111111111 2233457889999999988776543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.5e-07 Score=105.00 Aligned_cols=189 Identities=15% Similarity=0.078 Sum_probs=125.1
Q ss_pred CcccCCC--CCCcccHHHHHHHHhcC-------h----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 8 LGHNGAK--TCKHNSILWVAKDFFAD-------D----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 8 ~g~tg~r--~kkg~~~~eRL~~~l~~-------~----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
.-+||+. +.-|....++|.+.... . ..+.+.+. ..++.++.+|++++ ++++.+++
T Consensus 24 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~------~~v~~~~~~~ 93 (285)
T 2p91_A 24 ALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKG----FGSDLVVKCDVSLD------EDIKNLKKFL 93 (285)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH----TTCCCEEECCTTCH------HHHHHHHHHH
T ss_pred EEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh----cCCeEEEEcCCCCH------HHHHHHHHHH
Confidence 4478987 78899999999874221 1 11112211 12477899999998 77766654
Q ss_pred -----CccEEEEcCccCCc--------c---cCHHHHHHHHHHHHHHHHHHhHhc-C-CCCeEEEEcCcccccccccccc
Q psy13944 73 -----DVNIVFHVAATVKF--------D---EHFQTAFEINCKGTEKLLKMAEEM-K-NLDSFIYVSTAYSNCNIKKIEE 134 (1217)
Q Consensus 73 -----~VDiViH~AA~v~f--------~---e~l~~a~~vNV~GT~~LLelAk~~-~-~lk~fV~vSTa~v~g~~~~I~E 134 (1217)
.+|+|||+||.... + +.++..+++|+.|+.++++++... . +-.++|++||...+...
T Consensus 94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----- 168 (285)
T 2p91_A 94 EENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV----- 168 (285)
T ss_dssp HHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC-----
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC-----
Confidence 68999999997532 1 234578999999999999998753 1 22699999997653210
Q ss_pred cccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCC
Q psy13944 135 KFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPC 209 (1217)
Q Consensus 135 ~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~ 209 (1217)
+ ....|+.||+..|.+.+.++ .++.+.+++|+.|.++.....
T Consensus 169 -----~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 215 (285)
T 2p91_A 169 -----P----------------------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI 215 (285)
T ss_dssp -----T----------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C
T ss_pred -----C----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc
Confidence 0 01369999999999887654 589999999999998754321
Q ss_pred cccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 210 PMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 210 pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+ ........+.... ....+..++|+|++++.++..
T Consensus 216 ~-------~~~~~~~~~~~~~---------p~~~~~~~~dva~~~~~l~s~ 250 (285)
T 2p91_A 216 T-------GFHLLMEHTTKVN---------PFGKPITIEDVGDTAVFLCSD 250 (285)
T ss_dssp T-------THHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHTSG
T ss_pred c-------chHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCC
Confidence 1 1111222211110 112367899999999887753
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.68 E-value=7.7e-08 Score=103.88 Aligned_cols=182 Identities=12% Similarity=0.084 Sum_probs=119.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhc-Chh--H-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA-DDA--F-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~-~~v--f-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|..+.++|.+... ..+ . +.+.+. ...++.++.+|++++ ++++.+++
T Consensus 6 vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 6 VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCD------KSLDTFVSKVGEI 76 (250)
T ss_dssp EEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCH------HHHHHHHHHHHHH
T ss_pred EEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCH------HHHHHHHHHHHHh
Confidence 44788888889999999886431 111 1 112111 135789999999997 77776665
Q ss_pred ----CccEEEEcCccCC-c----c---cCHHHHHHHHHHHHHHHHHHhHhc---C------C-----CCeEEEEcCcccc
Q psy13944 73 ----DVNIVFHVAATVK-F----D---EHFQTAFEINCKGTEKLLKMAEEM---K------N-----LDSFIYVSTAYSN 126 (1217)
Q Consensus 73 ----~VDiViH~AA~v~-f----~---e~l~~a~~vNV~GT~~LLelAk~~---~------~-----lk~fV~vSTa~v~ 126 (1217)
++|+|||+||... . + +.++..+++|+.|+.++++++... . + ..+||++||...+
T Consensus 77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 8999999999765 1 1 234578999999999999888643 1 2 5799999998654
Q ss_pred cccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEeccee
Q psy13944 127 CNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIV 201 (1217)
Q Consensus 127 g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV 201 (1217)
..... +..++ .....|+.||+..|.+++.++ .++.+.++||+.|
T Consensus 157 ~~~~~--~~~~~-----------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 205 (250)
T 1yo6_A 157 ITDNT--SGSAQ-----------------------------FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp STTCC--STTSS-----------------------------SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred cCCcc--ccccc-----------------------------CCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCce
Confidence 32110 00000 011469999999999987654 4899999999988
Q ss_pred ccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 202 MPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 202 ~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.++.... ..+++.+++|++++.++....
T Consensus 206 ~t~~~~~---------------------------------~~~~~~~~~a~~~~~~~~~~~ 233 (250)
T 1yo6_A 206 QTNLGGK---------------------------------NAALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp ----------------------------------------------HHHHHHHHHHHTTCC
T ss_pred ecCCCCC---------------------------------CCCCCHHHHHHHHHHHHhccc
Confidence 6652110 135789999999998886543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2.6e-08 Score=110.79 Aligned_cols=198 Identities=13% Similarity=0.039 Sum_probs=126.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|..+.++|.+..... + .+.+.++......++.++.+|++++ ++++.+++
T Consensus 25 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 25 ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV------PEIEALVAAVVERYG 98 (277)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHTC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH------HHHHHHHHHHHHHhC
Confidence 4478999889999999998742211 0 1111111111134688999999998 77766654
Q ss_pred CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc-----CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM-----KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~-----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||.... . +.++..+++|+.|+.++++++.+. .+..++|++||...+.. .+
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~ 168 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG----------VV 168 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC----------CT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC----------CC
Confidence 68999999997532 1 234578999999999999998653 13469999999765321 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+.+.++ .++.+.++||+.|.++..... ...
T Consensus 169 ----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~ 217 (277)
T 2rhc_B 169 ----------------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASV---REH 217 (277)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHH---HHH
T ss_pred ----------------------------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhh---hhh
Confidence 01369999999998887654 579999999999887532110 000
Q ss_pred cch-----hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 216 MNG-----LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 216 ~~g-----~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
... .......+..+ .....++.++|+|++++.++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~~ 259 (277)
T 2rhc_B 218 YSDIWEVSTEEAFDRITAR---------VPIGRYVQPSEVAEMVAYLIGPG 259 (277)
T ss_dssp HHHHHTCCHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGG
T ss_pred cccccccchHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCch
Confidence 000 00111111111 11245899999999998877543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.67 E-value=7.8e-08 Score=106.83 Aligned_cols=212 Identities=13% Similarity=0.079 Sum_probs=132.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-----------------H---HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHH
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-----------------F---DRLRKENANFTERIVVLTADLQSDGLGLDEKEK 67 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-----------------f---d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl 67 (1217)
.-+||+.+.-|....++|.+.....+ - +.+..+......++.++.+|++++ +++
T Consensus 13 vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v 86 (287)
T 3pxx_A 13 VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR------AAV 86 (287)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH------HHH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH------HHH
Confidence 34788888889999999887432211 1 111111122345789999999998 777
Q ss_pred HHhcC-------CccEEEEcCccCCcc-----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccc--c
Q psy13944 68 KVLRE-------DVNIVFHVAATVKFD-----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKK--I 132 (1217)
Q Consensus 68 ~~L~~-------~VDiViH~AA~v~f~-----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~--I 132 (1217)
+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .+-.++|++||...+..... .
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 166 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG 166 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence 76655 789999999986432 345689999999999999998753 33358999999766543210 0
Q ss_pred cccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCC
Q psy13944 133 EEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEE 207 (1217)
Q Consensus 133 ~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~e 207 (1217)
.|.. .. .....|+.||+..+.+.+.++ .++.+..++|+.|..+...
T Consensus 167 ~~~~--------------------~~---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 217 (287)
T 3pxx_A 167 AGGP--------------------QG---------PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN 217 (287)
T ss_dssp ------------------------CH---------HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS
T ss_pred cccc--------------------CC---------CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence 0000 00 001359999999998887654 4899999999999887543
Q ss_pred CCccc---ccccc--hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 208 PCPMW---VKGMN--GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 208 P~pGW---idn~~--g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
..+.+ ..... ......... .........+..++|+|++++.++....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~p~dva~~v~fL~s~~a 269 (287)
T 3pxx_A 218 SAPMYRQFRPDLEAPSRADALLAF--------PAMQAMPTPYVEASDISNAVCFLASDES 269 (287)
T ss_dssp SHHHHHHHCTTSSSCCHHHHHHHG--------GGGCSSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred ccchhhhhccccccchhHHHHhhh--------hhhcccCCCCCCHHHHHhhHheecchhh
Confidence 21100 00000 000000000 0011112568999999999998776443
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2.7e-08 Score=109.07 Aligned_cols=191 Identities=13% Similarity=0.064 Sum_probs=124.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHH----hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDR----LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~----Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|..+.++|.+..... +.++ +.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 15 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id 88 (265)
T 2o23_A 15 AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSE------KDVQTALALAKGKFGRVD 88 (265)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCH------HHHHHHHHHHHHHCCCCC
Confidence 4478999889999999998743221 1110 0000011134789999999998 77777765 799
Q ss_pred EEEEcCccCCcc-------------cCHHHHHHHHHHHHHHHHHHhHhc---C------CCCeEEEEcCccccccccccc
Q psy13944 76 IVFHVAATVKFD-------------EHFQTAFEINCKGTEKLLKMAEEM---K------NLDSFIYVSTAYSNCNIKKIE 133 (1217)
Q Consensus 76 iViH~AA~v~f~-------------e~l~~a~~vNV~GT~~LLelAk~~---~------~lk~fV~vSTa~v~g~~~~I~ 133 (1217)
+|||+||..... +.++..+++|+.|+.++++++... . +..++|++||..++...
T Consensus 89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---- 164 (265)
T 2o23_A 89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---- 164 (265)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----
T ss_pred EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC----
Confidence 999999975321 235578999999999999988753 1 35689999998764321
Q ss_pred ccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCC
Q psy13944 134 EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEP 208 (1217)
Q Consensus 134 E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP 208 (1217)
+ ....|+.||+..|.+.+..+ .++.+.+++|+.|.++....
T Consensus 165 ------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 210 (265)
T 2o23_A 165 ------V----------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS 210 (265)
T ss_dssp ------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred ------C----------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc
Confidence 0 01369999998888876653 58999999999987764321
Q ss_pred CcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 209 CPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 209 ~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
.+. .....+... .+ ....++.++|+|++++.++.
T Consensus 211 ~~~---------~~~~~~~~~----~~----~~~~~~~~~dva~~~~~l~~ 244 (265)
T 2o23_A 211 LPE---------KVCNFLASQ----VP----FPSRLGDPAEYAHLVQAIIE 244 (265)
T ss_dssp ---------------CHHHHT----CS----SSCSCBCHHHHHHHHHHHHH
T ss_pred cCH---------HHHHHHHHc----CC----CcCCCCCHHHHHHHHHHHhh
Confidence 110 000011111 00 00247889999999988874
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.67 E-value=8.3e-08 Score=107.36 Aligned_cols=202 Identities=14% Similarity=0.027 Sum_probs=127.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH 79 (1217)
.=+||+.+.-|....++|.+..... + -+.+.+.......++.++.+|++++ ++++.+++ .+|+|||
T Consensus 19 vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 19 VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDL------SSVRRFADGVSGADVLIN 92 (291)
T ss_dssp EEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCH------HHHHHHHHTCCCEEEEEE
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCH------HHHHHHHHhcCCCCEEEE
Confidence 3489999999999999998743221 1 1222222223345789999999998 78877765 5799999
Q ss_pred cCccCCc-----ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 80 VAATVKF-----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 80 ~AA~v~f-----~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
+||.... .+.++..+++|+.|+.++++++... ..+++|++||...+......++..
T Consensus 93 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~~~~~~~~~~------------------ 153 (291)
T 3rd5_A 93 NAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWPGRINLEDLN------------------ 153 (291)
T ss_dssp CCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTTCCCCSSCTT------------------
T ss_pred CCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhccCCCCccccc------------------
Confidence 9997532 2345679999999999999999874 446999999987654321110000
Q ss_pred cccccccccccCCCCC--ChHHHHHHHHHHHHHHhc-----CC--CCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 155 HTELTVLNDILIKPMP--NTYTLSKNACEQMVREKM-----DK--LPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~P--NtYa~SK~~AE~lv~~~~-----~g--LPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
.+ ...++ ..|+.||++.|.+.+.++ .+ +.+..++|+.|..+.....+. .....
T Consensus 154 ~~---------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~---------~~~~~ 215 (291)
T 3rd5_A 154 WR---------SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR---------KLGDA 215 (291)
T ss_dssp CS---------SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------
T ss_pred cc---------ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch---------HHHHH
Confidence 00 00011 469999999998887654 35 889999999987764322110 00000
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
+.. . -..+-..+.+++|++++.++...
T Consensus 216 ~~~-----~----~~~~~~~~~~~~A~~~~~l~~~~ 242 (291)
T 3rd5_A 216 LMS-----A----ATRVVATDADFGARQTLYAASQD 242 (291)
T ss_dssp ------------------CHHHHHHHHHHHHHHHSC
T ss_pred HHH-----H----HHHHHhCCHHHHHHHHHHHHcCC
Confidence 000 0 01122346899999999888763
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.9e-08 Score=114.52 Aligned_cols=219 Identities=13% Similarity=0.081 Sum_probs=141.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-h-----------------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-A-----------------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL 70 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-v-----------------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L 70 (1217)
-+||+.+.-|....++|.+..... + .+.+.++......++.++.+|++++ ++++.+
T Consensus 31 lVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~ 104 (322)
T 3qlj_A 31 IVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW------DQAAGL 104 (322)
T ss_dssp EETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH------HHHHHH
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHH
Confidence 378999889999999998743221 1 1112222122235688999999998 777766
Q ss_pred cC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-CC--------CCeEEEEcCccccc
Q psy13944 71 RE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KN--------LDSFIYVSTAYSNC 127 (1217)
Q Consensus 71 ~~-------~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-~~--------lk~fV~vSTa~v~g 127 (1217)
++ .+|++||+||.... .+.++..+++|+.|+..+++++... .. -.++|++||...+.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 65 78999999998642 1235578999999999999987542 00 13899999976532
Q ss_pred ccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceec
Q psy13944 128 NIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVM 202 (1217)
Q Consensus 128 ~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~ 202 (1217)
.. + ....|+.||+..+.+.+.++ .++.+..++|+ +.
T Consensus 185 ~~----------~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~ 225 (322)
T 3qlj_A 185 GS----------V----------------------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-AR 225 (322)
T ss_dssp CB----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TT
T ss_pred CC----------C----------------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CC
Confidence 10 0 01369999999998887654 58999999999 54
Q ss_pred cCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccc
Q psy13944 203 PVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKL 282 (1217)
Q Consensus 203 G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl 282 (1217)
.+.... +..... .......+++.++|++++++.++..... .
T Consensus 226 t~~~~~---~~~~~~------------------~~~~~~~~~~~pedva~~v~~L~s~~~~----~-------------- 266 (322)
T 3qlj_A 226 TRMTET---VFAEMM------------------ATQDQDFDAMAPENVSPLVVWLGSAEAR----D-------------- 266 (322)
T ss_dssp SCCSCC---SCCC--------------------------CCTTCGGGTHHHHHHHTSGGGG----G--------------
T ss_pred Cccchh---hhhhhh------------------hccccccCCCCHHHHHHHHHHHhCcccc----C--------------
Confidence 432211 111000 0112223567899999998887754333 0
Q ss_pred cCCCCchhhhhhhhccceeeccCC-c-----------------cCchHHHHHHHHhhchh
Q psy13944 283 IDPNNNVEEESIKKLDVNYEINHG-N-----------------YDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 283 ~np~~~~~~~~~~~~g~~YnI~sg-~-----------------~s~~el~~~ia~~~g~~ 324 (1217)
..|+.+++..| . .+..|+++.+.+.+|.+
T Consensus 267 -------------itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 267 -------------VTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp -------------CCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred -------------CCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 12556666555 2 36679999999988754
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.5e-07 Score=103.52 Aligned_cols=196 Identities=11% Similarity=0.059 Sum_probs=127.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 9 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 9 VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNT------DDIQKMIEQIDEKFG 82 (257)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHcC
Confidence 3478999889999999998743221 11222222223345799999999998 77776664
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++.. .....++|++||....... +
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 151 (257)
T 3imf_A 83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG----------P- 151 (257)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC----------T-
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC----------C-
Confidence 68999999996432 123557899999999999998832 1345689999997653221 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc------CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM------DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~------~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|.++..... .|...
T Consensus 152 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~-~~~~~ 203 (257)
T 3imf_A 152 ---------------------------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK-LWISE 203 (257)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------
T ss_pred ---------------------------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh-cccCH
Confidence 01369999999888876543 389999999999988743211 01110
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
. +....... .....+...+|+|++++.++....
T Consensus 204 ~-----~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~ 236 (257)
T 3imf_A 204 E-----MAKRTIQS---------VPLGRLGTPEEIAGLAYYLCSDEA 236 (257)
T ss_dssp C-----CSHHHHTT---------STTCSCBCHHHHHHHHHHHHSGGG
T ss_pred H-----HHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchh
Confidence 0 00111111 112347889999999988776543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=104.57 Aligned_cols=192 Identities=13% Similarity=0.031 Sum_probs=123.7
Q ss_pred cccCCCC-CCcccHHHHHHHHhcCh--------hHHHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 9 GHNGAKT-CKHNSILWVAKDFFADD--------AFDRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 9 g~tg~r~-kkg~~~~eRL~~~l~~~--------vfd~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
-+||+.+ .-|....++|.+..... -.+.+.++. .....++.++.+|++++ ++++.+++
T Consensus 26 lITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 26 LVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTST------EAVDALITQTVEKA 99 (266)
T ss_dssp EESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCH------HHHHHHHHHHHHHh
Confidence 3788864 58889999988742211 111111111 11235899999999998 77776654
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++.+... +.-.++|++||...+... +
T Consensus 100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~ 169 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ----------H 169 (266)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC----------T
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC----------C
Confidence 67999999997532 1235578999999999999988653 244689999997653221 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+++.++ .++.+..++|+.|..+......
T Consensus 170 ----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----- 216 (266)
T 3o38_A 170 ----------------------------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS----- 216 (266)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------
T ss_pred ----------------------------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC-----
Confidence 01369999999999887654 5899999999988876432110
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. ...... .........+..++|+|++++.++...
T Consensus 217 --~-~~~~~~---------~~~~~~~~r~~~~~dva~~i~~l~s~~ 250 (266)
T 3o38_A 217 --S-SELLDR---------LASDEAFGRAAEPWEVAATIAFLASDY 250 (266)
T ss_dssp ----------------------CCTTSSCCCHHHHHHHHHHHHSGG
T ss_pred --c-HHHHHH---------HHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence 0 001111 111233456789999999998877643
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.66 E-value=1.4e-07 Score=104.18 Aligned_cols=194 Identities=13% Similarity=0.075 Sum_probs=128.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCccc-CCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANF-TERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+...+. + .+.+.++.... ..++.++.+|++++ ++++.+++
T Consensus 13 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 13 VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR------AQCDALAGRAVEEF 86 (262)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSH------HHHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCH------HHHHHHHHHHHHHh
Confidence 3488999889999999998743221 1 11111111111 25799999999998 77776654
Q ss_pred -CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+||.... . +.++..+++|+.|+.++++++... .+..++|++||...... +.|
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------~~~- 156 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT---------GYP- 156 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB---------CCT-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC---------CCC-
Confidence 78999999997532 1 234578999999999999887653 24569999999754210 000
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+.+.++ .++.+..++|+.|.++.....
T Consensus 157 ---------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~------- 202 (262)
T 3pk0_A 157 ---------------------------GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN------- 202 (262)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT-------
T ss_pred ---------------------------CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc-------
Confidence 01369999999999887654 589999999999988632110
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.......+.... ....+...+|++++++.++....
T Consensus 203 --~~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~~ 237 (262)
T 3pk0_A 203 --GEEYIASMARSI---------PAGALGTPEDIGHLAAFLATKEA 237 (262)
T ss_dssp --CHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred --CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccc
Confidence 012222222221 11236789999999988776543
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.66 E-value=6.6e-08 Score=107.55 Aligned_cols=195 Identities=13% Similarity=0.042 Sum_probs=128.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------Cc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------DV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------~V 74 (1217)
.-+||+.+.-|....++|.+.....+ .+.+.++......++.++.+|++++ ++.+.+.+ .+
T Consensus 34 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 34 AVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADL------EGAANVAEELAATRRV 107 (273)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCH------HHHHHHHHHHHHHSCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHhcCCC
Confidence 34789999999999999987432211 1111122122345788999999998 66665533 78
Q ss_pred cEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 75 NIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 75 DiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
|+|||+||..... +.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----------~---- 173 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG----------R---- 173 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------S----
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC----------C----
Confidence 9999999986421 234578999999999999987321 244689999997654221 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|.++..... ...
T Consensus 174 ------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~~~ 222 (273)
T 3uf0_A 174 ------------------------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL-------RAD 222 (273)
T ss_dssp ------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTS
T ss_pred ------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc-------ccC
Confidence 01369999999998887654 589999999999988643211 001
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
......+..+ .....+..++|+|++++.++....
T Consensus 223 ~~~~~~~~~~---------~p~~r~~~pedva~~v~~L~s~~a 256 (273)
T 3uf0_A 223 DERAAEITAR---------IPAGRWATPEDMVGPAVFLASDAA 256 (273)
T ss_dssp HHHHHHHHHH---------STTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCchh
Confidence 1111222111 112357889999999988776543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.65 E-value=2.2e-07 Score=101.31 Aligned_cols=197 Identities=13% Similarity=0.061 Sum_probs=127.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh---cCCccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL---REDVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L---~~~VDiViH 79 (1217)
.-+||+.+.-|....++|.+..... + -+.+.+.. ...++.++.+|++++ ++++.+ ...+|+|||
T Consensus 9 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~D~~~~------~~~~~~~~~~~~id~lv~ 80 (246)
T 2ag5_A 9 IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE--KYPGIQTRVLDVTKK------KQIDQFANEVERLDVLFN 80 (246)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG--GSTTEEEEECCTTCH------HHHHHHHHHCSCCSEEEE
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--hccCceEEEeeCCCH------HHHHHHHHHhCCCCEEEE
Confidence 4489999999999999998743221 1 12222211 123789999999998 666654 457899999
Q ss_pred cCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 80 VAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 80 ~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
+||..... +.++..+++|+.|+.++++++... .+..++|++||...+... +.
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------~~---------- 142 (246)
T 2ag5_A 81 VAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG--------VV---------- 142 (246)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC--------CT----------
T ss_pred CCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC--------CC----------
Confidence 99975431 235578899999999999987531 245799999997653210 00
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
....|+.||+..|.+.+..+ .++++.++||+.|+++.... +......+.....
T Consensus 143 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~ 200 (246)
T 2ag5_A 143 -------------------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARN 200 (246)
T ss_dssp -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHH
T ss_pred -------------------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh---hhhcccCcHHHHH
Confidence 01369999999999887754 48999999999999863211 0000000111122
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.+.... ....++..+|+|++++.++...
T Consensus 201 ~~~~~~---------~~~~~~~~~dvA~~v~~l~s~~ 228 (246)
T 2ag5_A 201 DFLKRQ---------KTGRFATAEEIAMLCVYLASDE 228 (246)
T ss_dssp HHHHTC---------TTSSCEEHHHHHHHHHHHHSGG
T ss_pred HHHhcC---------CCCCCCCHHHHHHHHHHHhCcc
Confidence 221110 1124789999999998877543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.65 E-value=6.1e-08 Score=107.45 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=123.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... --+.+.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 30 vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 30 ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDR------KSIKQLAEVAEREMEGID 103 (266)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSH------HHHHHHHHHHHHHHTSCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCH------HHHHHHHHHHHHHcCCCC
Confidence 3479999999999999998743211 11222221122345789999999998 77776664 789
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+|||+||.... .+.++..+++|+.|+.++.+.+... .+..++|++||...+... +
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------~----- 168 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN----------P----- 168 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC----------------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC----------C-----
Confidence 99999997532 1335678999999977776665321 244699999997653210 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
....|+.||+..+.+.+.++ .++++..++|+.|.++..... . .
T Consensus 169 -----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-------~--~ 216 (266)
T 3grp_A 169 -----------------------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL-------N--E 216 (266)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC-------C--H
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc-------C--H
Confidence 01369999998887776544 589999999998877532211 0 1
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.....+..+ .....+..++|+|++++.++....
T Consensus 217 ~~~~~~~~~---------~p~~r~~~~edvA~~v~~L~s~~~ 249 (266)
T 3grp_A 217 KQKEAIMAM---------IPMKRMGIGEEIAFATVYLASDEA 249 (266)
T ss_dssp HHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccc
Confidence 122222222 223457789999999988776543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.65 E-value=7.2e-08 Score=105.48 Aligned_cols=152 Identities=13% Similarity=0.136 Sum_probs=105.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH 79 (1217)
.-+||+.+.-|....++|.+..... +.+ |...... ..+.++.+|++++ ++++.+++ ++|+|||
T Consensus 10 vlVTGas~giG~~ia~~l~~~G~~V~~~~--r~~~~~~-~~~~~~~~D~~d~------~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 10 VWVTGAGKGIGYATALAFVEAGAKVTGFD--QAFTQEQ-YPFATEVMDVADA------AQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEE--SCCCSSC-CSSEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEE
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEe--Cchhhhc-CCceEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEE
Confidence 4489999999999999998743321 112 1111111 1378899999998 77776664 7899999
Q ss_pred cCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 80 VAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 80 ~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
+||..... +.++..+++|+.|+.++++++... .+..++|++||..++... +
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~--------- 141 (250)
T 2fwm_X 81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR----------I--------- 141 (250)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------T---------
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC----------C---------
Confidence 99975321 235678999999999999988321 245799999998654210 0
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
....|+.||+..|.+.+..+ .++++.++||+.|.++..
T Consensus 142 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 184 (250)
T 2fwm_X 142 -------------------GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQ 184 (250)
T ss_dssp -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred -------------------CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccc
Confidence 01369999999999887654 589999999999998753
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=9.8e-08 Score=105.21 Aligned_cols=189 Identities=15% Similarity=0.065 Sum_probs=124.3
Q ss_pred CcccCCC--CCCcccHHHHHHHHhcCh-----------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 8 LGHNGAK--TCKHNSILWVAKDFFADD-----------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 8 ~g~tg~r--~kkg~~~~eRL~~~l~~~-----------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
.-+||+. +.-|....++|.+..... ..+.+.+. .....++.+|++++ ++++.+++
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~----~~~~~~~~~D~~~~------~~v~~~~~~~ 81 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ----LGSDIVLQCDVAED------ASIDTMFAEL 81 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH----TTCCCEEECCTTCH------HHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh----cCCcEEEEccCCCH------HHHHHHHHHH
Confidence 4478887 788899999998742211 11112111 12347889999998 77766654
Q ss_pred -----CccEEEEcCccCCc------------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccc
Q psy13944 73 -----DVNIVFHVAATVKF------------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEE 134 (1217)
Q Consensus 73 -----~VDiViH~AA~v~f------------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E 134 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++++... ..-.++|++||...+...
T Consensus 82 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----- 156 (265)
T 1qsg_A 82 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI----- 156 (265)
T ss_dssp HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----
T ss_pred HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC-----
Confidence 68999999997541 1234578999999999999998763 112489999997653210
Q ss_pred cccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCC
Q psy13944 135 KFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPC 209 (1217)
Q Consensus 135 ~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~ 209 (1217)
+ ....|+.||+..|.+.+.++ .++.+.+++|+.|.++.....
T Consensus 157 -----~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 203 (265)
T 1qsg_A 157 -----P----------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI 203 (265)
T ss_dssp -----T----------------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS
T ss_pred -----C----------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc
Confidence 0 01369999999999887654 489999999999998754221
Q ss_pred cccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 210 PMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 210 pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+ ........+..+. ....+..++|+|++++.++..
T Consensus 204 ~-------~~~~~~~~~~~~~---------p~~~~~~~~dva~~v~~l~s~ 238 (265)
T 1qsg_A 204 K-------DFRKMLAHCEAVT---------PIRRTVTIEDVGNSAAFLCSD 238 (265)
T ss_dssp T-------THHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHTSG
T ss_pred c-------ccHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCc
Confidence 1 1112222221110 112367899999999887754
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.65 E-value=9.7e-08 Score=104.48 Aligned_cols=192 Identities=11% Similarity=0.025 Sum_probs=127.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+.....+ -+.+.+.......+...+.+|++++ ++++.+++ .+|
T Consensus 12 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 12 ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNP------ESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH------HHHHHHHHHHHHHHCCCS
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCH------HHHHHHHHHHHHHcCCCC
Confidence 34889998899999999987432211 1111111112234578899999998 77777665 789
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
++||+||.... .+.++..+++|+.|+.++++++... .+..++|++||....... +
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~----- 150 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN----------A----- 150 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T-----
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC----------C-----
Confidence 99999997532 1235578999999999999987531 244689999997553210 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
....|+.||+..+.+.+..+ .++++..++|+.|..+.....+ .
T Consensus 151 -----------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~ 198 (248)
T 3op4_A 151 -----------------------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---------D 198 (248)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---------H
T ss_pred -----------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---------H
Confidence 01369999998877776543 5899999999998776433211 1
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
........+ .....+..++|++++++.++...
T Consensus 199 ~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~ 230 (248)
T 3op4_A 199 EQRTATLAQ---------VPAGRLGDPREIASAVAFLASPE 230 (248)
T ss_dssp HHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCCc
Confidence 111112221 12245789999999998777543
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.65 E-value=7.9e-08 Score=109.77 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=108.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-------------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-------------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-------------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
.-+||+.+.-|....++|.+.....+ .+.+.+.......++.++.+|++++ ++++.+++
T Consensus 8 vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~------~~v~~~~~~~ 81 (324)
T 3u9l_A 8 ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQ------VSVDRAIDQI 81 (324)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCH------HHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCH------HHHHHHHHHH
Confidence 34789988889999999987432211 1222222222346799999999998 77777765
Q ss_pred -----CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccc
Q psy13944 73 -----DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 73 -----~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
++|+|||+||.... . +.++..+++|+.|+.++++++ ++ .+..++|++||.......
T Consensus 82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~-~~~g~iV~isS~~~~~~~------- 153 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR-QKHGLLIWISSSSSAGGT------- 153 (324)
T ss_dssp HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCC-------
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEEEEEecchhccCC-------
Confidence 78999999997532 1 234578899999999999998 43 255789999998654210
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.| ....|+.||+..|.+.+.++ .|+.+.+++|+.|.++.
T Consensus 154 --~~----------------------------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 154 --PP----------------------------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp --CS----------------------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred --CC----------------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 00 11369999999999887764 58999999999997653
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.4e-07 Score=104.69 Aligned_cols=197 Identities=15% Similarity=0.114 Sum_probs=124.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------- 71 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.++
T Consensus 24 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 24 ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR------TERDKLMQTVAHVFD 97 (273)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHTT
T ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 3478999889999999998742211 01111111111234788999999998 7777665
Q ss_pred CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
..+|++||+||..... +.++..+++|+.|+.++++++... .+..++|++||..++....
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------- 166 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP----------- 166 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT-----------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC-----------
Confidence 5799999999975321 235578899999999999988421 2456999999987643210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|.++...... ...
T Consensus 167 ---------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~ 216 (273)
T 1ae1_A 167 ---------------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKN 216 (273)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------
T ss_pred ---------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhh---hcc
Confidence 01369999999998887654 5899999999999987532210 000
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.........+... .....+...+|+|++++.++..
T Consensus 217 ~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l~s~ 251 (273)
T 1ae1_A 217 PHQKEEIDNFIVK---------TPMGRAGKPQEVSALIAFLCFP 251 (273)
T ss_dssp --CHHHHHHHHHH---------STTCSCBCHHHHHHHHHHHHSG
T ss_pred cCcHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCc
Confidence 0001111111111 0112478999999999887754
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.4e-07 Score=102.77 Aligned_cols=191 Identities=13% Similarity=0.114 Sum_probs=123.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 7 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 7 ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANA------EDVTNMVKQTVDVF 80 (246)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 4478888888999999988732211 01111111111235788999999998 77776665
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|++||+||..... +.++..+++|+.|+.++++.+... .+..++|++||....... |
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 149 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN----------P- 149 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC----------C-
Confidence 789999999975321 235578999999987777665421 245799999997653210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..+.+.+..+ .++.+.+++|+.|..+.....+ ..
T Consensus 150 ---------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~- 198 (246)
T 2uvd_A 150 ---------------------------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD---EN- 198 (246)
T ss_dssp ---------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC---TT-
T ss_pred ---------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC---HH-
Confidence 01369999998888765543 5899999999999876432211 00
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
....+.... ....++..+|+|++++.++..
T Consensus 199 -----~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~ 228 (246)
T 2uvd_A 199 -----IKAEMLKLI---------PAAQFGEAQDIANAVTFFASD 228 (246)
T ss_dssp -----HHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSG
T ss_pred -----HHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCc
Confidence 111111110 112478999999999887754
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=7.8e-08 Score=105.51 Aligned_cols=191 Identities=13% Similarity=0.103 Sum_probs=122.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... +. +.+.+...+...++.++.+|++++ ++++.+++ ++|
T Consensus 8 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 8 VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE------EDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCH------HHHHHHHHHHHHHcCCCC
Confidence 4478999889999999998743221 11 111111111124688999999998 77776665 799
Q ss_pred EEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHH----hHhcCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKM----AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLel----Ak~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+||.... . +.++..+++|+.|+..+.+. +++. +..++|++||..++... +
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~----------~---- 146 (254)
T 1hdc_A 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGL----------A---- 146 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC----------T----
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCC----------C----
Confidence 99999997532 1 23557899999999855544 4442 45799999998654321 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||+..|.+.+..+ .++.+.++||+.|.++....
T Consensus 147 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------- 191 (254)
T 1hdc_A 147 ------------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE----------- 191 (254)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----------
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc-----------
Confidence 01369999999998887654 58999999999988763210
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccc-cHHHHHHHHHHHHHhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMV-PGDLVVNILLAAAWDV 261 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~V-pVDdVvnAii~aa~~~ 261 (1217)
........+. .......+. +.+|+|++++.++...
T Consensus 192 ------~~~~~~~~~~-~~~p~~~~~~~~~dvA~~v~~l~s~~ 227 (254)
T 1hdc_A 192 ------TGIRQGEGNY-PNTPMGRVGNEPGEIAGAVVKLLSDT 227 (254)
T ss_dssp ------HTCCCSTTSC-TTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred ------cchhHHHHHH-hcCCCCCCCCCHHHHHHHHHHHhCch
Confidence 0000000000 001112367 8999999999887543
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=9.9e-08 Score=104.28 Aligned_cols=191 Identities=16% Similarity=0.122 Sum_probs=121.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH-----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF-----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf-----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
.-+||+.+.-|....++|.+..... +. +.+.+.......++.++.+|++++ ++++.++ ..+
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 10 AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQP------GDVEAFGKQVISTFGRC 83 (249)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCH------HHHHHHHHHHHHHcCCC
Confidence 4489999999999999998743221 11 222211111235789999999998 7776664 478
Q ss_pred cEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|+|||+||.... . +.++..+++|+.|+.++++++ ++ .+..++|++||..++... +
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~----------~--- 149 (249)
T 2ew8_A 84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR-NGWGRIINLTSTTYWLKI----------E--- 149 (249)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGGSCC----------S---
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCeEEEEEcchhhccCC----------C---
Confidence 999999997532 1 234578999999988888774 33 245799999998764321 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCC-CCcccccccc
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEE-PCPMWVKGMN 217 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~e-P~pGWidn~~ 217 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|.++... ... ...
T Consensus 150 -------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~- 200 (249)
T 2ew8_A 150 -------------------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL---SAM- 200 (249)
T ss_dssp -------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccc---cch-
Confidence 01369999999998887654 5899999999999886432 100 000
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
... ..... .....+..++|+|++++.++..
T Consensus 201 --~~~----~~~~~-------~~~~~~~~p~dva~~~~~l~s~ 230 (249)
T 2ew8_A 201 --FDV----LPNML-------QAIPRLQVPLDLTGAAAFLASD 230 (249)
T ss_dssp -----------CTT-------SSSCSCCCTHHHHHHHHHHTSG
T ss_pred --hhH----HHHhh-------CccCCCCCHHHHHHHHHHHcCc
Confidence 000 00000 1123478999999999887754
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.64 E-value=9.2e-08 Score=106.64 Aligned_cols=199 Identities=14% Similarity=0.091 Sum_probs=128.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... + -+.+.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 30 vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 30 CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSA------KDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCH------HHHHHHHHHHHHHcCCCC
Confidence 3479999999999999998743221 1 1222211122346789999999998 77776665 789
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
++||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~----- 168 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI----------A----- 168 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC----------T-----
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC----------C-----
Confidence 99999997532 1235578899999999998887432 234599999997654221 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
....|+.||+..|.+.+.++ .++.+..++|+.|..+.... .......+.
T Consensus 169 -----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~ 222 (277)
T 4dqx_A 169 -----------------------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTK---IFAEAKDPA 222 (277)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHHTCSCHH
T ss_pred -----------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhh---hcccccchh
Confidence 01369999999998887654 57999999999887653100 000000111
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
........ ......+..++|+|++++.++....
T Consensus 223 ~~~~~~~~---------~~~~~r~~~pedvA~~v~~L~s~~~ 255 (277)
T 4dqx_A 223 KLRSDFNA---------RAVMDRMGTAEEIAEAMLFLASDRS 255 (277)
T ss_dssp HHHHHHHT---------TSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHh---------cCcccCCcCHHHHHHHHHHHhCCcc
Confidence 11111221 1223457889999999998876543
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.64 E-value=8.4e-08 Score=104.88 Aligned_cols=192 Identities=9% Similarity=0.030 Sum_probs=125.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+.....+ ...+.++......++.++.+|++++ ++++.+++
T Consensus 16 vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 16 AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDW------DSTKQAFDKVKAEV 89 (256)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCH------HHHHHHHHHHHHHT
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCH------HHHHHHHHHHHHhc
Confidence 45889998889999999987422211 1111111122345789999999998 77766654
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++.+... .+..++|++||....... +
T Consensus 90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 158 (256)
T 3ezl_A 90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----------F- 158 (256)
T ss_dssp CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC----------S-
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC----------C-
Confidence 689999999975321 235578999999988887776321 244689999997653211 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..+.+.+..+ .++.+.+++|+.|..+.... .
T Consensus 159 ---------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~ 204 (256)
T 3ezl_A 159 ---------------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-------I 204 (256)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-------S
T ss_pred ---------------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-------c
Confidence 01369999998888776544 57999999999887653211 1
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. ......+..+ .....+...+|++++++.++...
T Consensus 205 ~--~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~ 238 (256)
T 3ezl_A 205 R--PDVLEKIVAT---------IPVRRLGSPDEIGSIVAWLASEE 238 (256)
T ss_dssp C--HHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGG
T ss_pred C--HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCc
Confidence 0 1222222221 11234778999999998777543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.6e-07 Score=103.60 Aligned_cols=192 Identities=10% Similarity=-0.007 Sum_probs=127.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... + .+...++......++.++.+|++++ ++++.+++
T Consensus 29 vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 29 VLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANR------EQCREVLEHEIAQH 102 (267)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHHHHHHHh
Confidence 4489999989999999998742221 1 1111111122345789999999998 77776654
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++.+.. ..+..++|++||...+... +
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 172 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN----------R 172 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC----------T
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC----------C
Confidence 78999999997532 123557899999999999998731 1355699999997553211 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..+.+.+..+ .++++.+++|+.|..+.....
T Consensus 173 ----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------ 218 (267)
T 4iiu_A 173 ----------------------------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME------ 218 (267)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC------
T ss_pred ----------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc------
Confidence 01369999997776665443 589999999999988754321
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.......... .....+..++|+|++++.++....
T Consensus 219 ----~~~~~~~~~~---------~p~~~~~~~edva~~~~~L~s~~~ 252 (267)
T 4iiu_A 219 ----ESALKEAMSM---------IPMKRMGQAEEVAGLASYLMSDIA 252 (267)
T ss_dssp ----HHHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred ----HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCcc
Confidence 1112222222 112347789999999988776433
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=3e-07 Score=101.67 Aligned_cols=194 Identities=12% Similarity=0.027 Sum_probs=124.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH--------HHhhhcCccc-CCCeEEEEccCCCCCCCCCHHHHHHhc------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF--------DRLRKENANF-TERIVVLTADLQSDGLGLDEKEKKVLR------ 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf--------d~Lr~~~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~------ 71 (1217)
.-+||+.+.-|....++|.+..... +. +.+.++.... ..++.++.+|++++.- ..++++.++
T Consensus 14 ~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~--~~~~~~~~~~~~~~~ 91 (276)
T 1mxh_A 14 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSS--LLDCCEDIIDCSFRA 91 (276)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTT--HHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccc--cHHHHHHHHHHHHHh
Confidence 4478999889999999998742211 11 1111111111 3578999999998610 002334333
Q ss_pred -CCccEEEEcCccCCcc------------------cCHHHHHHHHHHHHHHHHHHhHhc--CCC------CeEEEEcCcc
Q psy13944 72 -EDVNIVFHVAATVKFD------------------EHFQTAFEINCKGTEKLLKMAEEM--KNL------DSFIYVSTAY 124 (1217)
Q Consensus 72 -~~VDiViH~AA~v~f~------------------e~l~~a~~vNV~GT~~LLelAk~~--~~l------k~fV~vSTa~ 124 (1217)
..+|+|||+||..... +.++..+++|+.|+.++++++... .+. .++|++||..
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~ 171 (276)
T 1mxh_A 92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 171 (276)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence 3789999999975321 334578999999999999998763 222 6899999986
Q ss_pred cccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecc
Q psy13944 125 SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPS 199 (1217)
Q Consensus 125 v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPs 199 (1217)
.+... + ....|+.||+..|.+.+.++ .++.+.+++|+
T Consensus 172 ~~~~~----------~----------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG 213 (276)
T 1mxh_A 172 TDLPL----------P----------------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPG 213 (276)
T ss_dssp GGSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred hcCCC----------C----------------------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence 64321 0 01369999999998887654 48999999999
Q ss_pred eeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 200 IVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 200 iV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.|.++ . ..+ ......+.... ...+++..++|+|++++.++..
T Consensus 214 ~v~t~-~-~~~---------~~~~~~~~~~~--------p~~r~~~~~~dva~~v~~l~s~ 255 (276)
T 1mxh_A 214 LSLLP-P-AMP---------QETQEEYRRKV--------PLGQSEASAAQIADAIAFLVSK 255 (276)
T ss_dssp SBSCC-S-SSC---------HHHHHHHHTTC--------TTTSCCBCHHHHHHHHHHHHSG
T ss_pred cccCC-c-cCC---------HHHHHHHHhcC--------CCCCCCCCHHHHHHHHHHHhCc
Confidence 99987 2 111 11112222211 1123378999999999887754
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.5e-07 Score=104.08 Aligned_cols=196 Identities=12% Similarity=0.040 Sum_probs=126.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH~ 80 (1217)
.-+||+.+.-|....++|.+.... +.-.-|. ++...++.++.+|++++ ++++.+++ ++|+|||+
T Consensus 11 vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~--~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~~ 81 (264)
T 2dtx_A 11 VIVTGASMGIGRAIAERFVDEGSK-VIDLSIH--DPGEAKYDHIECDVTNP------DQVKASIDHIFKEYGSISVLVNN 81 (264)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCE-EEEEESS--CCCSCSSEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCE-EEEEecC--cccCCceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEEC
Confidence 448999999999999999875332 2111111 11135789999999998 77776655 68999999
Q ss_pred CccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 81 AATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 81 AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
||..... +.++..+++|+.|+.++++++... .+..++|++||..++... +
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~---------- 141 (264)
T 2dtx_A 82 AGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT----------K---------- 141 (264)
T ss_dssp CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC----------T----------
T ss_pred CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC----------C----------
Confidence 9975321 235678999999999999887542 245799999998654321 0
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccchhH----HH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT----AM 222 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~----~l 222 (1217)
....|+.||+..|.+.+.++ +.+.+.+++|+.|.++......... ..... ..
T Consensus 142 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~ 201 (264)
T 2dtx_A 142 ------------------NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELE--VGSDPMRIEKK 201 (264)
T ss_dssp ------------------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHH--HCSCHHHHHHH
T ss_pred ------------------CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcc--cccCchhhHHH
Confidence 01369999999999887654 2388999999988664211000000 00000 11
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
...+..+ .....++.++|+|++++.++...
T Consensus 202 ~~~~~~~---------~p~~~~~~p~dvA~~v~~l~s~~ 231 (264)
T 2dtx_A 202 ISEWGHE---------HPMQRIGKPQEVASAVAFLASRE 231 (264)
T ss_dssp HHHHHHH---------STTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHhc---------CCCCCCcCHHHHHHHHHHHhCch
Confidence 1111111 11235889999999998887543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.2e-07 Score=106.61 Aligned_cols=194 Identities=15% Similarity=0.083 Sum_probs=127.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh----------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA----------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v----------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
-+||+.+.-|....++|.+.....+ .+.+.+.....-.++.++.+|++++ ++++.+++
T Consensus 53 lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 53 LVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDE------SFARSLVHKAREAL 126 (294)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSH------HHHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCH------HHHHHHHHHHHHHc
Confidence 3889988899999999987432211 1112222222346789999999998 77766553
Q ss_pred -CccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 -DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 -~VDiViH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|++||+||... + .+.++..+++|+.|+.++++++... ..-.++|++||..++....
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~------------ 194 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP------------ 194 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT------------
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC------------
Confidence 7899999999743 1 1235678999999999999998763 2224899999987644210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.-..|+.||+..|.+.+..+ .++.+..++|+.|.++..... +....
T Consensus 195 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-~~~~~-- 245 (294)
T 3r3s_A 195 --------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG-GQTQD-- 245 (294)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT-TSCGG--
T ss_pred --------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccccc-CCCHH--
Confidence 01359999999998887654 589999999999988641100 00000
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
....+ ........+...+|++++++.++....
T Consensus 246 ----~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~s~~~ 277 (294)
T 3r3s_A 246 ----KIPQF---------GQQTPMKRAGQPAELAPVYVYLASQES 277 (294)
T ss_dssp ----GSTTT---------TTTSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred ----HHHHH---------HhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 00000 011222346788999999988776443
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=8.9e-08 Score=105.26 Aligned_cols=201 Identities=14% Similarity=0.112 Sum_probs=123.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--------hh-HHHhhhcCccc-CCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--------DA-FDRLRKENANF-TERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--------~v-fd~Lr~~~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|....++|.+.... .- .+.+.++.... ..++.++.+|++++ ++++.+++
T Consensus 7 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 7 AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG------EAVRGLVDNAVRQ 80 (260)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSH------HHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCH------HHHHHHHHHHHHh
Confidence 347888888899999998874221 10 11111111111 34688999999998 77776664
Q ss_pred --CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 --DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 --~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 150 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS----------A 150 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC----------C
Confidence 68999999997532 1235578999999999999888531 245799999998654321 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc-cccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP-MWVK 214 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p-GWid 214 (1217)
....|+.||+..|.+.+.++ .++.+.+++|+.|.++...... .+..
T Consensus 151 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~ 202 (260)
T 1x1t_A 151 ----------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAE 202 (260)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------
T ss_pred ----------------------------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhcc
Confidence 01369999999998887653 5899999999999887532210 0000
Q ss_pred ccchh--HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 215 GMNGL--TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 215 n~~g~--~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. .+. ...... +.........+..++|++++++.++...
T Consensus 203 ~-~~~~~~~~~~~--------~~~~~~p~~~~~~p~dva~~~~~l~s~~ 242 (260)
T 1x1t_A 203 K-NGVDQETAARE--------LLSEKQPSLQFVTPEQLGGTAVFLASDA 242 (260)
T ss_dssp ---------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGG
T ss_pred c-cCCchHHHHHH--------HhhccCCCCCCcCHHHHHHHHHHHhChh
Confidence 0 000 000000 0000011235789999999998877543
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.7e-07 Score=102.96 Aligned_cols=193 Identities=19% Similarity=0.088 Sum_probs=124.2
Q ss_pred CcccCCC--CCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAK--TCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r--~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.=+||+. +.-|....++|.+.... ..-+.+.+.. ....++.++.+|++++ ++++.+++
T Consensus 17 vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 17 ILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFA-AEFGSELVFPCDVADD------AQIDALFASLKTH 89 (271)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH-HHTTCCCEEECCTTCH------HHHHHHHHHHHHH
T ss_pred EEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHH-HHcCCcEEEECCCCCH------HHHHHHHHHHHHH
Confidence 3478887 78889999998874321 1111111111 1123578999999998 77776664
Q ss_pred --CccEEEEcCccCCc------------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccccccccc
Q psy13944 73 --DVNIVFHVAATVKF------------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 --~VDiViH~AA~v~f------------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++... ..-.++|++||...+...
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 161 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI-------- 161 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC--------
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC--------
Confidence 67999999997532 1234578999999999999998653 222489999997653221
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
| ....|+.||+..+.+.+.++ .++.+..++|+.|..+.....
T Consensus 162 --~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--- 208 (271)
T 3ek2_A 162 --P----------------------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI--- 208 (271)
T ss_dssp --T----------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC---
T ss_pred --C----------------------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc---
Confidence 0 01469999999998887654 589999999999988654321
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.........+..+ .....+..++|+|++++.++...
T Consensus 209 ----~~~~~~~~~~~~~---------~~~~~~~~pedva~~i~~l~s~~ 244 (271)
T 3ek2_A 209 ----KSFGKILDFVESN---------SPLKRNVTIEQVGNAGAFLLSDL 244 (271)
T ss_dssp ----HHHHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGG
T ss_pred ----cchHHHHHHHHhc---------CCcCCCCCHHHHHHHHHHHcCcc
Confidence 1111222222221 11234678999999999877643
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1e-07 Score=99.71 Aligned_cols=111 Identities=9% Similarity=0.017 Sum_probs=85.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.+|++++ +++..+++++|+|||+|+....... .++|+.|+.+++++|++. ++++|||+||..+
T Consensus 46 ~~~~~~~~D~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~ 114 (206)
T 1hdo_A 46 RPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFL 114 (206)
T ss_dssp CCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGG
T ss_pred CceEEEEecCCCH------HHHHHHHcCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeee
Confidence 4688999999874 4688888999999999997654221 247999999999999987 7889999999988
Q ss_pred ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeE
Q psy13944 629 NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRV 708 (1217)
Q Consensus 629 ~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i 708 (1217)
++.... .|. ..+.|+.+|+.+|.+++. .++++.+
T Consensus 115 ~~~~~~-------~~~---------------------------~~~~y~~~K~~~e~~~~~------------~~i~~~~ 148 (206)
T 1hdo_A 115 LWDPTK-------VPP---------------------------RLQAVTDDHIRMHKVLRE------------SGLKYVA 148 (206)
T ss_dssp TSCTTC-------SCG---------------------------GGHHHHHHHHHHHHHHHH------------TCSEEEE
T ss_pred ccCccc-------ccc---------------------------cchhHHHHHHHHHHHHHh------------CCCCEEE
Confidence 765221 000 113599999999999832 3789999
Q ss_pred eccCccch
Q psy13944 709 CRNHPVGE 716 (1217)
Q Consensus 709 ~rp~~v~e 716 (1217)
+||..+++
T Consensus 149 lrp~~~~~ 156 (206)
T 1hdo_A 149 VMPPHIGD 156 (206)
T ss_dssp ECCSEEEC
T ss_pred EeCCcccC
Confidence 99998864
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.62 E-value=3.8e-07 Score=101.84 Aligned_cols=199 Identities=16% Similarity=0.069 Sum_probs=131.5
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
|+ .-+||+.+.-|....++|.+.... .-.+.+.++......++.++.+|++++ ++++.+++
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~ 81 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE------ALHEALVELAVR 81 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCH------HHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHH
Confidence 44 348999999999999999874321 111222222222346789999999998 77776664
Q ss_pred ---CccEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 ---DVNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ---~VDiViH~AA~v~f-----~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|++||+||.... + +.++..+++|+.|+.++++++... .+-.++|++||...+.. +
T Consensus 82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------~ 152 (280)
T 3tox_A 82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA---------G 152 (280)
T ss_dssp HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB---------C
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC---------C
Confidence 78999999996522 1 235578999999999999987542 23459999999765411 0
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCC-Cccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEP-CPMW 212 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP-~pGW 212 (1217)
.+ ....|+.||+..+.+.+..+ .++.+..++|+.|.++.... .++
T Consensus 153 ~~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~- 203 (280)
T 3tox_A 153 FA----------------------------GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG- 203 (280)
T ss_dssp CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT-
T ss_pred CC----------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc-
Confidence 00 01369999999998887654 58999999999998875422 111
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.. ......+... .....+..++|+|++++.++....
T Consensus 204 --~~---~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~a 239 (280)
T 3tox_A 204 --AA---PETRGFVEGL---------HALKRIARPEEIAEAALYLASDGA 239 (280)
T ss_dssp --CC---THHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred --cC---HHHHHHHhcc---------CccCCCcCHHHHHHHHHHHhCccc
Confidence 00 1111111111 122357899999999998876543
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.61 E-value=9.7e-08 Score=106.03 Aligned_cols=191 Identities=10% Similarity=0.029 Sum_probs=126.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
-+||+.+.-|....++|.+..... -.+.+.++......++..+.+|++++ ++++.+++ .
T Consensus 32 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 32 IVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA------TAVDALVESTLKEFGA 105 (270)
T ss_dssp EETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCH------HHHHHHHHHHHHHHSC
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCH------HHHHHHHHHHHHHcCC
Confidence 479999999999999998743211 11112122122235788999999998 77776665 7
Q ss_pred ccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|++||....... +
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--- 172 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN----------P--- 172 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T---
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC----------C---
Confidence 8999999997532 1235578999999999999987531 233589999997653210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..+.+.+..+ .++.+.+++|+.|..+..... .
T Consensus 173 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~- 219 (270)
T 3ftp_A 173 -------------------------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL-------P- 219 (270)
T ss_dssp -------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS-------C-
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc-------C-
Confidence 01369999998887776543 589999999998876532111 0
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
......+... .....+..++|+|++++.++...
T Consensus 220 -~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~ 252 (270)
T 3ftp_A 220 -QEQQTALKTQ---------IPLGRLGSPEDIAHAVAFLASPQ 252 (270)
T ss_dssp -HHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred -HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCCC
Confidence 1111122211 22345789999999998877543
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.9e-07 Score=102.96 Aligned_cols=201 Identities=17% Similarity=0.197 Sum_probs=129.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
-+||+.+.-|....++|.+.... .-.+.+.++....-.++.++.+|++++ ++++.+++ .
T Consensus 15 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 15 VISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDD------AQVAHLVDETMKAYGR 88 (264)
T ss_dssp EEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHTSC
T ss_pred EEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCC
Confidence 38899999999999999874321 111112222222346789999999998 77776654 6
Q ss_pred ccEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f-----~---e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|++||+|+.... + +.++..+++|+.|+.++++.+... ++-.++|++||...+... +
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--- 155 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQ----------A--- 155 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCC----------T---
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCC----------C---
Confidence 8999999987421 1 235578999999999999987542 111599999997653211 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc-cc-
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK-GM- 216 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid-n~- 216 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|.++.......... ..
T Consensus 156 -------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~ 210 (264)
T 3ucx_A 156 -------------------------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYG 210 (264)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTT
T ss_pred -------------------------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcC
Confidence 01369999999998887654 68999999999998764221100000 00
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.....+...+.. ......+..++|+|++++.++....
T Consensus 211 ~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~L~s~~~ 247 (264)
T 3ucx_A 211 TSVEDIYNAAAA---------GSDLKRLPTEDEVASAILFMASDLA 247 (264)
T ss_dssp CCHHHHHHHHHT---------TSSSSSCCBHHHHHHHHHHHHSGGG
T ss_pred CCHHHHHHHHhc---------cCCcccCCCHHHHHHHHHHHcCccc
Confidence 000112222222 2233468899999999988776433
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.61 E-value=5e-08 Score=108.07 Aligned_cols=183 Identities=14% Similarity=0.102 Sum_probs=124.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|..+.++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 34 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 34 VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR------EDIYSSAKKVKAEIG 107 (272)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHTC
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCH------HHHHHHHHHHHHHCC
Confidence 3478998889999999998742210 11111111111235789999999997 66666554
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
++|+|||+||..... +.++..+++|+.|+.++++.+... .+..++|++||..++....
T Consensus 108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 175 (272)
T 1yb1_A 108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP------------ 175 (272)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH------------
T ss_pred CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC------------
Confidence 789999999975421 234578999999988877776431 3567999999987643210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--------CCCCEEEEecceeccCCCCCCccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--------DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--------~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
. ...|+.||+..|.+++.++ .++++.++||+.|.++....
T Consensus 176 -~-------------------------~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------ 223 (272)
T 1yb1_A 176 -F-------------------------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------ 223 (272)
T ss_dssp -H-------------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------
T ss_pred -C-------------------------chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------
Confidence 0 0359999999998887653 37999999999988764210
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.. .....++.++|+|++++.++....
T Consensus 224 --~~--------------------~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 224 --PS--------------------TSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp --TH--------------------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred --cc--------------------ccccCCCCHHHHHHHHHHHHHcCC
Confidence 00 001246899999999998886543
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.2e-07 Score=105.81 Aligned_cols=194 Identities=15% Similarity=0.108 Sum_probs=119.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++....-.++.++.+|++++ ++++.+++
T Consensus 32 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 32 AIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADL------SSHQATVDAVVAEF 105 (280)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSG------GGHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHHHc
Confidence 3478999999999999998742211 11112222222345799999999998 67666655
Q ss_pred -CccEEEEcCccCC-----c----ccCHHHHHHHHHHHHHHHHHHhHhc----C--CCCeEEEEcCcccccccccccccc
Q psy13944 73 -DVNIVFHVAATVK-----F----DEHFQTAFEINCKGTEKLLKMAEEM----K--NLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 73 -~VDiViH~AA~v~-----f----~e~l~~a~~vNV~GT~~LLelAk~~----~--~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
.+|++||+||... + .+.++..+++|+.|+.++++++... + .-.++|++||.......
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------- 178 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS------- 178 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-------
Confidence 7899999999731 1 1235578889999999998887542 1 13489999997653210
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
+ ....|+.||+..+.+.+..+ .++.+..++|+.|..+......+
T Consensus 179 ---~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~ 227 (280)
T 4da9_A 179 ---P----------------------------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG 227 (280)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------
T ss_pred ---C----------------------------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch
Confidence 0 01359999999998887654 57999999999998765332110
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
........+ ......+..++|+|++++.++....
T Consensus 228 ---------~~~~~~~~~--------~~p~~r~~~pedvA~~v~~L~s~~~ 261 (280)
T 4da9_A 228 ---------KYDGLIESG--------LVPMRRWGEPEDIGNIVAGLAGGQF 261 (280)
T ss_dssp -------------------------------CCBCHHHHHHHHHHHHTSTT
T ss_pred ---------hHHHHHhhc--------CCCcCCcCCHHHHHHHHHHHhCccc
Confidence 000000010 1122357789999999988776543
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.3e-07 Score=104.00 Aligned_cols=197 Identities=13% Similarity=0.104 Sum_probs=127.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+...+. + -+.+.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 11 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 11 AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL------NEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCH------HHHHHHHHHHHHHHSSEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH------HHHHHHHHHHHHHhCCCC
Confidence 3478999899999999998743221 0 1112111112235789999999998 77665543 689
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
++||+||.... .+.++..+++|+.|+.++++++... ..-.++|++||...+....
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------------- 147 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP----------------- 147 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT-----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-----------------
Confidence 99999997542 1235578999999999999998753 2224899999976543210
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|..+..... ++.+. ....+
T Consensus 148 ---------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~--~~~~~ 203 (255)
T 4eso_A 148 ---------------------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA-GITEA--ERAEF 203 (255)
T ss_dssp ---------------------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCT-TSCHH--HHHHH
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccc-cCChh--hHHHH
Confidence 01369999999998886654 589999999999988754221 11100 00111
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
....... .....+...+|+|++++.++..
T Consensus 204 ~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~ 232 (255)
T 4eso_A 204 KTLGDNI---------TPMKRNGTADEVARAVLFLAFE 232 (255)
T ss_dssp HHHHHHH---------STTSSCBCHHHHHHHHHHHHHT
T ss_pred HHHHhcc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 1111111 1223467899999999887765
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.61 E-value=9e-08 Score=106.09 Aligned_cols=195 Identities=15% Similarity=0.100 Sum_probs=126.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDiViH 79 (1217)
.-+||+.+.-|....++|.+..... +.++ .+........+.+|++++ ++.+.++ ..+|++||
T Consensus 31 vlVTGas~gIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 31 ALVTGAAGGIGGAVVTALRAAGARVAVADR----AVAGIAADLHLPGDLREA------AYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEECSS----CCTTSCCSEECCCCTTSH------HHHHHHHHHHHHHHSCCCEEEE
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHhhhccCcCCCCH------HHHHHHHHHHHHhcCCCCEEEE
Confidence 3489999999999999998753321 1221 122233345568899987 6665544 37899999
Q ss_pred cCccCCc-------ccCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCCCCChHHHHH
Q psy13944 80 VAATVKF-------DEHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 80 ~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
+||.... .+.++..+++|+.|+.++++++. + .+..++|++||...+... +
T Consensus 101 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iv~isS~~~~~~~----------~-------- 161 (266)
T 3uxy_A 101 NAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA-AGGGAIVNVASCWGLRPG----------P-------- 161 (266)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCSBTTBCC----------T--------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEEEEECCHHhCCCC----------C--------
Confidence 9998642 12355788999999999999983 3 245699999997653210 0
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
....|+.||+..|.+.+.++ .++.+.+++|+.|.++..... +......+....
T Consensus 162 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~ 219 (266)
T 3uxy_A 162 --------------------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTG--FAKRGFDPDRAV 219 (266)
T ss_dssp --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHH--HHHTTCCHHHHH
T ss_pred --------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhh--hhcccccchHHH
Confidence 01369999999998887654 589999999999887632110 000000011111
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
..+..+ .....+..++|+|++++.++....
T Consensus 220 ~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~ 249 (266)
T 3uxy_A 220 AELGRT---------VPLGRIAEPEDIADVVLFLASDAA 249 (266)
T ss_dssp HHHHTT---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhc---------CCCCCCcCHHHHHHHHHHHhCchh
Confidence 222221 223467899999999988876543
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.60 E-value=9.1e-08 Score=104.82 Aligned_cols=196 Identities=16% Similarity=0.110 Sum_probs=123.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... + -+.+.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 9 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id 82 (253)
T 1hxh_A 9 ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSE------ADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCH------HHHHHHHHHHHHHHCSCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCH------HHHHHHHHHHHHHcCCCC
Confidence 4478999899999999998742211 1 1112111111135788999999998 77766654 469
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+|||+||..... +.++..+++|+.|+..+.+.+.. + .+ .++|++||...+... +
T Consensus 83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------~----- 146 (253)
T 1hxh_A 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI----------E----- 146 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC----------T-----
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC----------C-----
Confidence 999999975321 23557899999988877665432 1 24 799999998764321 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----C--CCCEEEEecceeccCCCCCCcccccccch
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----D--KLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~--gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+..+ . ++++.++||+.|+++...... .....
T Consensus 147 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~- 200 (253)
T 1hxh_A 147 -----------------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL--PKGVS- 200 (253)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS--CTTCC-
T ss_pred -----------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhcc--chhhh-
Confidence 01369999999999887754 3 899999999999886421100 00000
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
... +.... .......+..++|+|++++.++...
T Consensus 201 -~~~---~~~~~------~~~p~~~~~~~~dvA~~~~~l~s~~ 233 (253)
T 1hxh_A 201 -KEM---VLHDP------KLNRAGRAYMPERIAQLVLFLASDE 233 (253)
T ss_dssp -HHH---HBCBT------TTBTTCCEECHHHHHHHHHHHHSGG
T ss_pred -HHH---Hhhhh------ccCccCCCCCHHHHHHHHHHHcCcc
Confidence 000 11100 0001124788999999998887643
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.60 E-value=1e-07 Score=106.00 Aligned_cols=195 Identities=11% Similarity=0.028 Sum_probs=127.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++....-.++.++.+|++++ ++++.+++
T Consensus 29 ~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 29 ALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSE------SEIIEAFARLDEQGI 102 (271)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH------HHHHHHHHHHHHHTC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHHCC
Confidence 3479999999999999998743211 11112222222345789999999998 77776665
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++||....... +
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~----------~-- 170 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR----------A-- 170 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC----------T--
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC----------C--
Confidence 68999999997532 1235578999999999998877542 234589999997543210 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|..+..... .
T Consensus 171 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~ 217 (271)
T 4ibo_A 171 --------------------------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL-------I 217 (271)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------H
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc-------c
Confidence 01369999999998887654 589999999999887642210 0
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
........+..+ .....+..++|+|++++.++....
T Consensus 218 ~~~~~~~~~~~~---------~p~~r~~~pedva~~v~~L~s~~~ 253 (271)
T 4ibo_A 218 DNPEFDAWVKAR---------TPAKRWGKPQELVGTAVFLSASAS 253 (271)
T ss_dssp HCHHHHHHHHHH---------STTCSCBCGGGGHHHHHHHHSGGG
T ss_pred cCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccc
Confidence 001111111111 112346788999999988776433
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.59 E-value=1e-07 Score=105.42 Aligned_cols=192 Identities=9% Similarity=0.063 Sum_probs=124.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+.-|....++|.+.... .....+.++......++.++.+|++++ ++++.+++
T Consensus 29 lITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 29 FVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADF------ESCERCAEKVLADFG 102 (269)
T ss_dssp EETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCH------HHHHHHHHHHHHHcC
Confidence 48899988899999998763221 111111111122346799999999998 77766654
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++.+... .+..++|++||...+... +
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 170 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA----------F-- 170 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T--
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC----------C--
Confidence 789999999975321 235578999999999999887531 244689999997553210 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|..+.....+.
T Consensus 171 --------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------ 218 (269)
T 3gk3_A 171 --------------------------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ------ 218 (269)
T ss_dssp --------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch------
Confidence 01369999998888776543 58999999999988765432110
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
... .. ..........+..++|+|++++.++...
T Consensus 219 ---~~~----~~----~~~~~~~~~~~~~p~dvA~~v~~L~s~~ 251 (269)
T 3gk3_A 219 ---DVL----EA----KILPQIPVGRLGRPDEVAALIAFLCSDD 251 (269)
T ss_dssp -----------C----CSGGGCTTSSCBCHHHHHHHHHHHTSTT
T ss_pred ---hHH----HH----HhhhcCCcCCccCHHHHHHHHHHHhCCC
Confidence 000 00 0011122345678999999988776543
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.59 E-value=7.9e-08 Score=107.78 Aligned_cols=193 Identities=10% Similarity=0.110 Sum_probs=124.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-----------HHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-----------FDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-----------fd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
.-+||+.+.-|..+.++|.+..... + .+.++...+ ....++.++.+|++++ ++++.+++
T Consensus 21 vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~ 94 (303)
T 1yxm_A 21 AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE------EEVNNLVKST 94 (303)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH------HHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH------HHHHHHHHHH
Confidence 3478999899999999998732210 0 111111110 1245799999999998 77776664
Q ss_pred -----CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 73 -----DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 -----~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|+|||+||.... . +.++..+++|+.|+.+++++|... .+..++|++||....+.
T Consensus 95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------- 165 (303)
T 1yxm_A 95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF--------- 165 (303)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC---------
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC---------
Confidence 58999999996421 1 234578999999999999997651 12468999999762111
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC-CCCcc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE-EPCPM 211 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~-eP~pG 211 (1217)
| ....|+.||+..+.+.+..+ .++++.++||+.|+++.. .....
T Consensus 166 --~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~ 215 (303)
T 1yxm_A 166 --P----------------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS 215 (303)
T ss_dssp --T----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG
T ss_pred --C----------------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccc
Confidence 0 01359999998888776554 489999999999999831 11111
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+... .......+ .....++.++|+|++++.++..
T Consensus 216 ~~~~------~~~~~~~~---------~p~~~~~~~~dvA~~i~~l~~~ 249 (303)
T 1yxm_A 216 WGQS------FFEGSFQK---------IPAKRIGVPEEVSSVVCFLLSP 249 (303)
T ss_dssp GGGG------GGTTGGGG---------STTSSCBCTHHHHHHHHHHHSG
T ss_pred cchH------HHHHHHhc---------CcccCCCCHHHHHHHHHHHhCc
Confidence 1000 00000000 1112478999999999988754
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.59 E-value=2.1e-07 Score=102.19 Aligned_cols=152 Identities=11% Similarity=0.049 Sum_probs=107.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-h---------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-A---------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-v---------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
-+||+.+.-|....++|.+..... + .+.+.++......++.++.+|++++ ++++.+++
T Consensus 6 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 6 MVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDK------ANFDSAIDEAAEKL 79 (258)
T ss_dssp EEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHh
Confidence 368888888888888888742211 0 1111111112235789999999998 77776654
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCC-CeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNL-DSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~l-k~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++++... .+. .++|++||...+... |
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 149 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF----------P 149 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC----------T
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC----------C
Confidence 789999999975321 235578999999999999888652 234 699999997653210 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|..+
T Consensus 150 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 150 ----------------------------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence 01369999999998887654 5899999999988664
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.1e-07 Score=103.68 Aligned_cols=204 Identities=14% Similarity=0.066 Sum_probs=128.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
.-+||+.+.-|....++|.+..... ..+.+.++......++.++.+|++++ ++++.++
T Consensus 32 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 32 ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV------EDIVRMFEEAVKIF 105 (283)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 3478999889999999998742211 11111111112235788999999997 6666554
Q ss_pred CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 72 EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
..+|+|||+||.... .+.++..+++|+.|+.++++++.+. .+..++|++||....... +
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~--- 172 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------V--- 172 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------C---
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------C---
Confidence 368999999997643 1335678999999999999998763 345799999997643210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCC-ccccccc-
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPC-PMWVKGM- 216 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~-pGWidn~- 216 (1217)
.....|+.||+..|.+.+..+ .++.+.+++|+.|.++..... ..+....
T Consensus 173 ------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~ 228 (283)
T 1g0o_A 173 ------------------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGE 228 (283)
T ss_dssp ------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCT
T ss_pred ------------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhcccccc
Confidence 001369999999998887654 589999999999987632110 0000000
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.........+..+. ......+...+|+|++++.++...
T Consensus 229 ~~~~~~~~~~~~~~-------~~p~~r~~~p~dvA~~v~~l~s~~ 266 (283)
T 1g0o_A 229 NLSNEEVDEYAAVQ-------WSPLRRVGLPIDIARVVCFLASND 266 (283)
T ss_dssp TCCHHHHHHHHHHH-------SCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred ccCHHHHHHHHhhc-------CCCCCCCcCHHHHHHHHHHHhCcc
Confidence 00011111111100 011224788999999998887643
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=1.5e-07 Score=105.87 Aligned_cols=200 Identities=14% Similarity=0.086 Sum_probs=126.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCC---CeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTE---RIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~---kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.-+||+.+.-|....++|.+..... + .+.+.++...... ++.++.+|++++ ++++.+++
T Consensus 29 vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~ 102 (297)
T 1xhl_A 29 VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA------SGQDDIINTTLA 102 (297)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH------HHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCH------HHHHHHHHHHHH
Confidence 4478999889999999998742211 0 1111111111112 688999999998 77776654
Q ss_pred ---CccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 73 ---DVNIVFHVAATVK-----FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 ---~VDiViH~AA~v~-----f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|+|||+||... +. +.++..+++|+.|+.++++++... .+ .++|++||...+... +
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~-------~ 174 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA-------H 174 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC-------C
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC-------C
Confidence 7899999999653 21 235578999999999999888642 23 699999997654321 0
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
+ ....|+.||+..|.+.+..+ .++.+.++||+.|.++.......
T Consensus 175 --~----------------------------~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~- 223 (297)
T 1xhl_A 175 --S----------------------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGL- 223 (297)
T ss_dssp --T----------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTC-
T ss_pred --C----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccc-
Confidence 0 01369999999998887653 68999999999998763211000
Q ss_pred ccccc-hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 213 VKGMN-GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 213 idn~~-g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..... ........+... .....+...+|+|++++.++...
T Consensus 224 ~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~l~s~~ 264 (297)
T 1xhl_A 224 PETASDKLYSFIGSRKEC---------IPVGHCGKPEEIANIIVFLADRN 264 (297)
T ss_dssp CHHHHHHHHHHHHHCTTT---------CTTSSCBCHHHHHHHHHHHHCHH
T ss_pred ccccccchHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCc
Confidence 00000 000111111111 11234789999999999887654
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.1e-07 Score=103.44 Aligned_cols=198 Identities=13% Similarity=0.088 Sum_probs=128.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----CccEEEEcCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-----DVNIVFHVAA 82 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-----~VDiViH~AA 82 (1217)
.-+||+.+.-|....++|.+.-...+.- ..+......+++.++.+|++++ ++++.+++ .+|++||+||
T Consensus 7 vlITGas~gIG~~~a~~l~~~~g~~v~~-~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~id~lv~nAg 79 (244)
T 4e4y_A 7 YLVTGGSKGIGKAVVELLLQNKNHTVIN-IDIQQSFSAENLKFIKADLTKQ------QDITNVLDIIKNVSFDGIFLNAG 79 (244)
T ss_dssp EEEETTTSHHHHHHHHHHTTSTTEEEEE-EESSCCCCCTTEEEEECCTTCH------HHHHHHHHHTTTCCEEEEEECCC
T ss_pred EEEeCCCChHHHHHHHHHHhcCCcEEEE-eccccccccccceEEecCcCCH------HHHHHHHHHHHhCCCCEEEECCc
Confidence 4488998888988888887621222211 1111122456789999999998 77776664 6899999999
Q ss_pred cCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 83 TVKF---D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 83 ~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
.... . +.++..+++|+.|+.++++++... ..-.++|++||...+... |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~-------------- 135 (244)
T 4e4y_A 80 ILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK----------P-------------- 135 (244)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC----------T--------------
T ss_pred cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC----------C--------------
Confidence 7532 1 235578999999999999998753 111379999997654221 0
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc-----hhHHHHH
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN-----GLTAMYV 224 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~-----g~~~li~ 224 (1217)
....|+.||+..|.+.+..+ .++.+..++|+.|..+...... .... .......
T Consensus 136 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~ 198 (244)
T 4e4y_A 136 --------------NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLI---QKYANNVGISFDEAQK 198 (244)
T ss_dssp --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHH---HHHHHHHTCCHHHHHH
T ss_pred --------------CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHH---HhhhhhcCCCHHHHHH
Confidence 01369999999999887654 5899999999988775321100 0000 0000111
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.... ......+..++|+|++++.++....
T Consensus 199 ~~~~---------~~p~~r~~~p~dvA~~v~~l~s~~~ 227 (244)
T 4e4y_A 199 QEEK---------EFPLNRIAQPQEIAELVIFLLSDKS 227 (244)
T ss_dssp HHHT---------TSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHhh---------cCCCCCCcCHHHHHHHHHHHhcCcc
Confidence 1111 1223457899999999998876543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=3.5e-07 Score=100.35 Aligned_cols=179 Identities=12% Similarity=0.069 Sum_probs=123.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhc--Chh--HH-------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA--DDA--FD-------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~--~~v--fd-------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.-+||+.+.-|..+.++|.+... ..+ .+ .+.+.. ....++.++.+|++++ ++++.+++
T Consensus 24 vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~-~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~ 96 (267)
T 1sny_A 24 ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-KNHSNIHILEIDLRNF------DAYDKLVADIEG 96 (267)
T ss_dssp EEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-HHCTTEEEEECCTTCG------GGHHHHHHHHHH
T ss_pred EEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhh-ccCCceEEEEecCCCh------HHHHHHHHHHHH
Confidence 44788888889999999887531 111 11 111110 1134789999999998 67776665
Q ss_pred -----CccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHhc----------CC----CCeEEEEcCccc
Q psy13944 73 -----DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEEM----------KN----LDSFIYVSTAYS 125 (1217)
Q Consensus 73 -----~VDiViH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~~----------~~----lk~fV~vSTa~v 125 (1217)
++|+|||+||... + .+.++..+++|+.|+.++++++... +. ..++|++||..+
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 7999999999754 1 1234578999999999999988653 10 368999999876
Q ss_pred ccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecce
Q psy13944 126 NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSI 200 (1217)
Q Consensus 126 ~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsi 200 (1217)
+.... +. .....|+.||+..|.+++.++ .++++.++||+.
T Consensus 177 ~~~~~-------~~----------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~ 221 (267)
T 1sny_A 177 SIQGN-------TD----------------------------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGW 221 (267)
T ss_dssp CSTTC-------CS----------------------------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCS
T ss_pred cccCC-------CC----------------------------CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcc
Confidence 43210 00 001369999999999987654 589999999998
Q ss_pred eccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 201 VMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 201 V~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
|-.+...+ ...+..+++|++++.++...
T Consensus 222 v~t~~~~~---------------------------------~~~~~~~~~a~~~~~~~~~~ 249 (267)
T 1sny_A 222 VKTDMGGS---------------------------------SAPLDVPTSTGQIVQTISKL 249 (267)
T ss_dssp BCSTTTCT---------------------------------TCSBCHHHHHHHHHHHHHHC
T ss_pred eecCCCCC---------------------------------CCCCCHHHHHHHHHHHHHhc
Confidence 86653210 02467899999999888654
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.58 E-value=2.9e-07 Score=103.65 Aligned_cols=193 Identities=13% Similarity=0.051 Sum_probs=127.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCccc-CCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANF-TERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++.... ..++.++.+|++++ ++++.+++
T Consensus 44 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 44 VLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDP------GSCADAARTVVDAF 117 (293)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCH------HHHHHHHHHHHHHc
Confidence 3489999999999999998743221 111111111111 25789999999998 77666554
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++. + .+..++|++||...... +.+
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iV~isS~~~~~~---------~~~ 187 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA-SGRGRVILTSSITGPVT---------GYP 187 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH-HSSCEEEEECCSBTTTB---------BCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCEEEEEeChhhccC---------CCC
Confidence 67999999997532 12355789999999999999984 3 24579999999764210 000
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|.++....
T Consensus 188 ----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~------- 232 (293)
T 3rih_A 188 ----------------------------GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD------- 232 (293)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-------
T ss_pred ----------------------------CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-------
Confidence 01369999999998887654 58999999999998863211
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
. .......+.... ...-+...+|++++++.++....
T Consensus 233 ~--~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~fL~s~~a 268 (293)
T 3rih_A 233 M--GEEYISGMARSI---------PMGMLGSPVDIGHLAAFLATDEA 268 (293)
T ss_dssp T--CHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred c--cHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCccc
Confidence 0 012222222221 11235678999999988776443
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.6e-07 Score=100.45 Aligned_cols=64 Identities=11% Similarity=0.143 Sum_probs=54.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa 626 (1217)
.+++++.+|++|+ +++..+++++|+|||+|+..... ..|+.++.+++++|++. ++++|||+||.
T Consensus 44 ~~v~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~ 107 (289)
T 3e48_A 44 GKVSVRQLDYFNQ------ESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYY 107 (289)
T ss_dssp TTBEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEES
T ss_pred CCCEEEEcCCCCH------HHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEccc
Confidence 4689999999985 47888899999999999976532 34899999999999997 79999999994
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.7e-07 Score=103.64 Aligned_cols=191 Identities=13% Similarity=0.063 Sum_probs=126.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... + -+.+.+...+...++.++.+|++++ ++++.+++ .+|
T Consensus 9 vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 9 ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDP------KAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH------HHHHHHHHHHHHHcCCCc
Confidence 4478999999999999998743221 1 1122211112225789999999998 77776654 479
Q ss_pred EEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 76 IVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 76 iViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
+|||+||..... +.++..+++|+.|+.++++++... ++..++|++||..+++.. .
T Consensus 83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------------~--- 145 (263)
T 2a4k_A 83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF--------------G--- 145 (263)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH--------------H---
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC--------------C---
Confidence 999999975321 224578899999999999998763 223599999998764210 0
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
...|+.||+..+.+.+..+ .++.+.++||+.|.++..... . ...
T Consensus 146 ----------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~--~~~ 194 (263)
T 2a4k_A 146 ----------------------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-------P--PWA 194 (263)
T ss_dssp ----------------------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-------C--HHH
T ss_pred ----------------------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-------C--HHH
Confidence 0359999997777765543 689999999999988743221 0 111
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
...+.... ....+...+|+|++++.++...
T Consensus 195 ~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~ 224 (263)
T 2a4k_A 195 WEQEVGAS---------PLGRAGRPEEVAQAALFLLSEE 224 (263)
T ss_dssp HHHHHHTS---------TTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcc
Confidence 11121111 1123688999999998887543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.6e-07 Score=101.05 Aligned_cols=180 Identities=13% Similarity=0.032 Sum_probs=115.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... +. +.+.+.. ....++.++.+|++++ ++++.+++ ++|
T Consensus 8 vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id 80 (234)
T 2ehd_A 8 VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALA-AELEGALPLPGDVREE------GDWARAVAAMEEAFGELS 80 (234)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHSTTCEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHhhhceEEEecCCCH------HHHHHHHHHHHHHcCCCC
Confidence 4589999999999999998742211 11 1111111 1123789999999997 77766553 689
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
+|||+||.... .+.++..+++|+.|+.++++.+ ++ .+..++|++||..++... +
T Consensus 81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~----------~---- 145 (234)
T 2ehd_A 81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR-RGGGTIVNVGSLAGKNPF----------K---- 145 (234)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-TTCEEEEEECCTTTTSCC----------T----
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCcEEEEECCchhcCCC----------C----
Confidence 99999997532 1234578999999998666554 44 356899999998654321 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||+..|.+.+.+. .++++.++||+.|..+.... . +
T Consensus 146 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~--~ 192 (234)
T 2ehd_A 146 ------------------------GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN-------T--P 192 (234)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC--------------------
T ss_pred ------------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc-------c--c
Confidence 01369999998888776543 58999999999876542110 0 0
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
. . ...+..+|+|++++.++....
T Consensus 193 ---------~---~--------~~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 193 ---------G---Q--------AWKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp -------------------------CCHHHHHHHHHHHHHSCC
T ss_pred ---------c---c--------cCCCCHHHHHHHHHHHhCCCc
Confidence 0 0 014789999999998876543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.57 E-value=5.5e-08 Score=106.92 Aligned_cols=155 Identities=11% Similarity=0.087 Sum_probs=107.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HH---hhhcCccc--CCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DR---LRKENANF--TERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~---Lr~~~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|....++|.+..... +. +. +.++.... ..++.++.+|++++ ++++.+++
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 10 AVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP------GDIDRLFEKARDL 83 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH------HHHHHHHHHHHHT
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCH------HHHHHHHHHHHHh
Confidence 4478999889999999998742211 01 11 11111100 12789999999998 77777665
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||..++....
T Consensus 84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 152 (260)
T 2z1n_A 84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ----------- 152 (260)
T ss_dssp TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC-----------
Confidence 49999999996532 1235578999999997777666421 2457999999987643210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
....|+.||+..+.+.+..+ .++++.++||+.|.++..
T Consensus 153 ---------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 195 (260)
T 2z1n_A 153 ---------------------------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV 195 (260)
T ss_dssp ---------------------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred ---------------------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence 01369999999998886654 589999999999998754
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.57 E-value=3.9e-07 Score=100.35 Aligned_cols=194 Identities=14% Similarity=0.078 Sum_probs=122.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... ..+...++......++.++.+|++++ ++++.+++
T Consensus 11 vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 11 IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNA------AEVEAAISAAADKF 84 (259)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCH------HHHHHHHHHHHHHh
Confidence 3488999889999999998742211 11112222222345789999999998 77777665
Q ss_pred -CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccc-cccccccccccCCCC
Q psy13944 73 -DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSN-CNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 -~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~-g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+||... +. +.++..+++|+.|+.++++++... ..-.++|++||...+ ... +
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~- 153 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGG----------P- 153 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCS----------T-
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCC----------C-
Confidence 7899999998651 11 224578999999999999998753 112389999997654 110 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ +++.+..+.|+.|..+......
T Consensus 154 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~------- 199 (259)
T 3edm_A 154 ---------------------------GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT------- 199 (259)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--------------
T ss_pred ---------------------------CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc-------
Confidence 01369999999998887654 4588999999988776432210
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
. ...... .........+..++|+|++++.++....
T Consensus 200 ~-~~~~~~---------~~~~~p~~r~~~pedva~~v~~L~s~~~ 234 (259)
T 3edm_A 200 K-PEVRER---------VAGATSLKREGSSEDVAGLVAFLASDDA 234 (259)
T ss_dssp -------------------------CCBCHHHHHHHHHHHHSGGG
T ss_pred C-hHHHHH---------HHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 0 000001 1111223457789999999988776443
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=104.82 Aligned_cols=202 Identities=10% Similarity=0.047 Sum_probs=128.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 27 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 27 AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST------DEVHAAVAAAVERFG 100 (279)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCH------HHHHHHHHHHHHHHC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 3478999999999999998742211 11112222222345789999999998 77766654
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh---c--CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE---M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~---~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++++.. + .+..++|++||....... +
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~----------~ 170 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV----------M 170 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC----------T
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC----------C
Confidence 68999999997532 123557889999999999998755 2 234689999997653210 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc-ccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM-WVK 214 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG-Wid 214 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|.++....... +..
T Consensus 171 ----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~ 222 (279)
T 3sju_A 171 ----------------------------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYAR 222 (279)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCS
T ss_pred ----------------------------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhh
Confidence 01369999998888776544 57999999999987753211000 000
Q ss_pred ccc-hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 215 GMN-GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 215 n~~-g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
... ........+..+ .....+..++|+|++++.++....
T Consensus 223 ~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~a 262 (279)
T 3sju_A 223 HWGVTEQEVHERFNAK---------IPLGRYSTPEEVAGLVGYLVTDAA 262 (279)
T ss_dssp SSCCCHHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHTSSGG
T ss_pred cccCChHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCccc
Confidence 000 011222222222 223457889999999887775433
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-07 Score=107.36 Aligned_cols=203 Identities=10% Similarity=0.035 Sum_probs=121.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCccc--CCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANF--TERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|..+.++|.+..... -.+.+.++.... ..++.++.+|++++ ++++.+++
T Consensus 11 vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 11 AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR------EGFKMAADEVEAR 84 (319)
T ss_dssp EEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCH------HHHHHHHHHHHHH
T ss_pred EEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCH------HHHHHHHHHHHHh
Confidence 4589999999999999998732211 111111111111 12789999999998 77776654
Q ss_pred --CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhcC---------CCCeEEEEcCcccccccccccc
Q psy13944 73 --DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEMK---------NLDSFIYVSTAYSNCNIKKIEE 134 (1217)
Q Consensus 73 --~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~~---------~lk~fV~vSTa~v~g~~~~I~E 134 (1217)
.+|+|||+||.... . +.++..+++|+.|+.++++++...- .-.++|++||...+...
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~----- 159 (319)
T 3ioy_A 85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA----- 159 (319)
T ss_dssp TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC-----
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC-----
Confidence 67999999997532 1 2355789999999999999886531 23479999998664321
Q ss_pred cccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHH----HHHHHHHHhc-CCCCEEEEecceeccCCCCCC
Q psy13944 135 KFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKN----ACEQMVREKM-DKLPLGIVRPSIVMPVVEEPC 209 (1217)
Q Consensus 135 ~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~----~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~ 209 (1217)
| ....|+.||+ ++|.+..++. .++.+.+++|+.|.++...+.
T Consensus 160 -----~----------------------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 206 (319)
T 3ioy_A 160 -----G----------------------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD 206 (319)
T ss_dssp -----S----------------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred -----C----------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence 0 1136999999 5666555555 689999999999987643321
Q ss_pred cccccccchhHHHHHHHhcCceeEEeeC-CCceeccccHHHHHHHHHHHHHhh
Q psy13944 210 PMWVKGMNGLTAMYVAVGLGIMRTVYQN-TSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 210 pGWidn~~g~~~li~~~~~G~l~~i~g~-~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.. . ...+.............. .......+++++++++++.++...
T Consensus 207 ~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 207 DI------R-PDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN 252 (319)
T ss_dssp -----------------------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred cc------C-chhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence 10 0 000000000000000000 011112279999999999888754
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.3e-07 Score=106.53 Aligned_cols=202 Identities=11% Similarity=0.026 Sum_probs=124.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+.... .-.+.+.++......++.++.+|++++ ++++.+++
T Consensus 34 vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 34 AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL------DEMVRLADEAFRLLG 107 (301)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCH------HHHHHHHHHHHHhCC
Confidence 347899999999999999874321 111112222122245789999999998 77776664
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++++.. .+.-.++|++||...+... |
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 176 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN----------A- 176 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC----------T-
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------C-
Confidence 78999999997532 123457899999999999998753 1224589999997654211 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+.+.++ .|+.+.+++|+.|..+.... .
T Consensus 177 ---------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-------~ 222 (301)
T 3tjr_A 177 ---------------------------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN-------S 222 (301)
T ss_dssp ---------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHH-------H
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccc-------c
Confidence 01369999998888776654 57999999999887652110 0
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
......... .........+......++++++|||++++.++...
T Consensus 223 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 223 ERIRGADYG-MSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp HHHC-----------------------CCCHHHHHHHHHHHHHHT
T ss_pred ccccchhhc-cccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 000000000 00001111122234457899999999999888754
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.56 E-value=3.3e-07 Score=100.57 Aligned_cols=198 Identities=15% Similarity=0.123 Sum_probs=126.2
Q ss_pred cccCCCCCCcccHHHHHHHHh-cChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFF-ADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l-~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
-+||+.+.-|....++|.+.. ...+. +.+.+.......++.++.+|++++ ++++.+++ .+
T Consensus 6 lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 6 LVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITED------SVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp EECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSH------HHHHHHHHHHHHHHSCC
T ss_pred EEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCH------HHHHHHHHHHHHhcCCc
Confidence 378888888889999987752 11221 111111111235789999999998 77776664 68
Q ss_pred cEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 75 NIVFHVAATVKF-----D---EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 75 DiViH~AA~v~f-----~---e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
|++||+||.... + +.++..+++|+.|+.++++++ ++. + .++|++||...+... +
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv~isS~~~~~~~----------~-- 145 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVVFVSSDACNMYF----------S-- 145 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCSCCCCSS----------C--
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEEEEcCchhccCC----------C--
Confidence 999999997432 1 234578999999999999988 332 3 699999997653221 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
.-..|+.||+..+.+.+..+ .++.+..++|+.|..+...............
T Consensus 146 --------------------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~ 199 (254)
T 3kzv_A 146 --------------------------SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMS 199 (254)
T ss_dssp --------------------------CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSC
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccC
Confidence 01369999999999987765 6899999999999887654332211000000
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
......+... .....+...+|++++++.++...
T Consensus 200 ~~~~~~~~~~---------~~~~r~~~p~dva~~v~~L~s~~ 232 (254)
T 3kzv_A 200 AEQLKMFRGL---------KENNQLLDSSVPATVYAKLALHG 232 (254)
T ss_dssp HHHHHHHHHH---------HTTC----CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH---------HhcCCcCCcccHHHHHHHHHhhc
Confidence 1111111111 11234778999999999887655
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=5.9e-07 Score=98.82 Aligned_cols=195 Identities=11% Similarity=0.065 Sum_probs=127.3
Q ss_pred CcccCCCCC--CcccHHHHHHHHhcCh--------hHHHhhhcCcccC-CCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGAKTC--KHNSILWVAKDFFADD--------AFDRLRKENANFT-ERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~r~k--kg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~-~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.-+||+.+. -|....++|.+..... .-+.+.+...... .++.++.+|++++ ++++.+++
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~ 83 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTND------AEIETCFASIKE 83 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSS------HHHHHHHHHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCH------HHHHHHHHHHHH
Confidence 347888855 8888999998742221 1111111111222 3799999999998 77776654
Q ss_pred ---CccEEEEcCccCC-------c-cc---CHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccccccccc
Q psy13944 73 ---DVNIVFHVAATVK-------F-DE---HFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 ---~VDiViH~AA~v~-------f-~e---~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|++||+||... + +. .+...+++|+.|+.++++++... ..-.++|++||...+..
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------- 154 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV--------- 154 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC---------
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc---------
Confidence 6799999999753 1 12 24578899999999999998753 22348999999765321
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
.| .-..|+.||+..+.+.+..+ .++.+..++|+.|..+.....+
T Consensus 155 -~~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-- 203 (266)
T 3oig_A 155 -MP----------------------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS-- 203 (266)
T ss_dssp -CT----------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT--
T ss_pred -CC----------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc--
Confidence 00 01369999999998887654 5799999999999876433221
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
........+... .....+...+|+|++++.++....
T Consensus 204 -----~~~~~~~~~~~~---------~~~~~~~~p~dva~~v~~l~s~~~ 239 (266)
T 3oig_A 204 -----DFNSILKDIEER---------APLRRTTTPEEVGDTAAFLFSDMS 239 (266)
T ss_dssp -----THHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGGG
T ss_pred -----chHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCch
Confidence 111222222211 111246789999999998876543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.6e-07 Score=104.11 Aligned_cols=200 Identities=16% Similarity=0.126 Sum_probs=128.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH~ 80 (1217)
.-+||+.+.-|....++|.+.... +.-.-+.. ......+..+.+|++++ ++++.+++ .+|++||+
T Consensus 17 vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~-~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~n 88 (269)
T 3vtz_A 17 AIVTGGSSGIGLAVVDALVRYGAK-VVSVSLDE-KSDVNVSDHFKIDVTNE------EEVKEAVEKTTKKYGRIDILVNN 88 (269)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCE-EEEEESCC---CTTSSEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEEC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCc-hhccCceeEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEEC
Confidence 448999999999999999875333 21111111 12234678899999998 77776664 78999999
Q ss_pred CccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 81 AATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 81 AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
||..... +.++..+++|+.|+.++++++... .+..++|++||..++....
T Consensus 89 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------------- 148 (269)
T 3vtz_A 89 AGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK-------------------- 148 (269)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT--------------------
T ss_pred CCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC--------------------
Confidence 9975321 234578899999999999887541 2446999999987643210
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccc--cccchhHHHHH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWV--KGMNGLTAMYV 224 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWi--dn~~g~~~li~ 224 (1217)
....|+.||+..|.+.+.++ +++.+..++|+.|.++......... ...........
T Consensus 149 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
T 3vtz_A 149 ------------------NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIE 210 (269)
T ss_dssp ------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHH
T ss_pred ------------------CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHH
Confidence 01369999999999887654 5788999999998875321100000 00000011111
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.+..+ .....+..++|+|++++.++....
T Consensus 211 ~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~ 239 (269)
T 3vtz_A 211 EWGRQ---------HPMGRIGRPEEVAEVVAFLASDRS 239 (269)
T ss_dssp HHHHH---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhc---------CCCCCCcCHHHHHHHHHHHhCCcc
Confidence 11111 223457889999999988776543
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.5e-07 Score=101.54 Aligned_cols=192 Identities=15% Similarity=0.090 Sum_probs=126.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHH-hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------CccEEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDR-LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------DVNIVFH 79 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~-Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------~VDiViH 79 (1217)
.-+||+.+.-|....++|.+..... +.++ ..+.......++.++.+|++++ ++++.+++ .+|++||
T Consensus 12 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~g~id~lv~ 85 (257)
T 3tl3_A 12 AVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDE------AAVASALDLAETMGTLRIVVN 85 (257)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCH------HHHHHHHHHHHHhCCCCEEEE
Confidence 3479999999999999998753321 1111 0000112346799999999998 77776665 7999999
Q ss_pred cCccCCc-----------ccCHHHHHHHHHHHHHHHHHHhHhc-----------CCCCeEEEEcCccccccccccccccc
Q psy13944 80 VAATVKF-----------DEHFQTAFEINCKGTEKLLKMAEEM-----------KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 80 ~AA~v~f-----------~e~l~~a~~vNV~GT~~LLelAk~~-----------~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
+||.... .+.++..+++|+.|+.++++++... ..-.++|++||...+....
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 158 (257)
T 3tl3_A 86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI------- 158 (257)
T ss_dssp CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH-------
T ss_pred CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC-------
Confidence 9997421 2335688999999999999988652 1224799999976542110
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
. ...|+.||+..+.+.+..+ .++.+..++|+.|..+.....+
T Consensus 159 ------~-------------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-- 205 (257)
T 3tl3_A 159 ------G-------------------------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP-- 205 (257)
T ss_dssp ------H-------------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C--
T ss_pred ------C-------------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc--
Confidence 0 0359999998887776543 5799999999998776432211
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
............ ....+...+|++++++.++..
T Consensus 206 -------~~~~~~~~~~~~--------~~~r~~~p~dva~~v~~l~s~ 238 (257)
T 3tl3_A 206 -------EEARASLGKQVP--------HPSRLGNPDEYGALAVHIIEN 238 (257)
T ss_dssp -------HHHHHHHHHTSS--------SSCSCBCHHHHHHHHHHHHHC
T ss_pred -------HHHHHHHHhcCC--------CCCCccCHHHHHHHHHHHhcC
Confidence 112222222210 113478899999999988765
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.2e-07 Score=105.56 Aligned_cols=153 Identities=15% Similarity=0.127 Sum_probs=108.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----------------HHHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHH
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----------------FDRLR---KENANFTERIVVLTADLQSDGLGLDEKEKK 68 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----------------fd~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~ 68 (1217)
-+||+.+.-|....++|.+.....+ -+.+. ++....-.++.++.+|++++ ++++
T Consensus 50 lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~ 123 (317)
T 3oec_A 50 FITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL------ASLQ 123 (317)
T ss_dssp EESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHH
T ss_pred EEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHHH
Confidence 3789998899999999987432211 11111 11112345789999999998 7777
Q ss_pred HhcC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccc
Q psy13944 69 VLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIK 130 (1217)
Q Consensus 69 ~L~~-------~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~ 130 (1217)
.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... +.-.++|++||...+...
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~- 202 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA- 202 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC-
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC-
Confidence 6664 68999999997532 1235578999999999999887532 223579999997653211
Q ss_pred cccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 131 KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 131 ~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
+ ....|+.||+..+.+.+.++ .++.+..++|+.|.++.
T Consensus 203 ---------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 245 (317)
T 3oec_A 203 ---------P----------------------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM 245 (317)
T ss_dssp ---------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred ---------C----------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence 0 01369999999998887654 58999999999998763
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=8.1e-08 Score=104.83 Aligned_cols=215 Identities=11% Similarity=0.002 Sum_probs=120.6
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----CccEEEEcCccC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE----DVNIVFHVAATV 84 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----~VDiViH~AA~v 84 (1217)
-+||+.+.-|....++|.+.... +.-.-|.. +..+. .+.+|++++ ++++.+++ .+|+|||+||..
T Consensus 5 lVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~--~~~~~--~~~~Dl~~~------~~v~~~~~~~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 5 VISGCATGIGAATRKVLEAAGHQ-IVGIDIRD--AEVIA--DLSTAEGRK------QAIADVLAKCSKGMDGLVLCAGLG 73 (257)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCE-EEEEESSS--SSEEC--CTTSHHHHH------HHHHHHHTTCTTCCSEEEECCCCC
T ss_pred EEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCc--hhhcc--ccccCCCCH------HHHHHHHHHhCCCCCEEEECCCCC
Confidence 36888888899999998874322 21111111 11111 156788876 67777664 459999999987
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 85 KFDEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 85 ~f~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
....+++..+++|+.|+.++++++... .+..++|++||..++..... ..+..+.. .+.+......+ +.
T Consensus 74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~--- 146 (257)
T 1fjh_A 74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA-GEEAKARAIVE---HA--- 146 (257)
T ss_dssp TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH-TCHHHHHHHHH---TC---
T ss_pred CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcc-cchhhhhhhhh---cc---
Confidence 645678899999999999999988631 34579999999877632110 00000000 01110000000 00
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE
Q psy13944 160 VLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 160 ~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i 234 (1217)
.+ ......|+.||+..|.+++..+ .++.+.+++|+.|.++..... . . .......... +
T Consensus 147 --~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~---~--~~~~~~~~~~----~ 209 (257)
T 1fjh_A 147 --GE---QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG---L---Q--DPRYGESIAK----F 209 (257)
T ss_dssp --CT---THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------------C
T ss_pred --cC---CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh---c---c--chhHHHHHHh----c
Confidence 00 0011469999999999887654 689999999999887643211 0 0 0000000000 0
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
......+++++|+|++++.++...
T Consensus 210 ---~~~~~~~~~~~dvA~~~~~l~~~~ 233 (257)
T 1fjh_A 210 ---VPPMGRRAEPSEMASVIAFLMSPA 233 (257)
T ss_dssp ---CCSTTSCCCTHHHHHHHHHHTSGG
T ss_pred ---ccccCCCCCHHHHHHHHHHHhCch
Confidence 011124789999999998877543
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=3.6e-07 Score=101.68 Aligned_cols=191 Identities=20% Similarity=0.103 Sum_probs=124.9
Q ss_pred cccCCCCC--CcccHHHHHHHHhcC-------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTC--KHNSILWVAKDFFAD-------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~k--kg~~~~eRL~~~l~~-------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+. -|....++|.+.... ..-+.+.+. .....++.++.+|++++ ++++.+++
T Consensus 30 lVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l-~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g 102 (280)
T 3nrc_A 30 LITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKL-CAEFNPAAVLPCDVISD------QEIKDLFVELGKVWD 102 (280)
T ss_dssp EECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHH-HGGGCCSEEEECCTTCH------HHHHHHHHHHHHHCS
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHH-HHhcCCceEEEeecCCH------HHHHHHHHHHHHHcC
Confidence 37888744 788888998873221 111111111 11224589999999998 77766654
Q ss_pred CccEEEEcCccCCc------------ccCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 DVNIVFHVAATVKF------------DEHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ~VDiViH~AA~v~f------------~e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++++... ++-.++|++||...+...
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 173 (280)
T 3nrc_A 103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM--------- 173 (280)
T ss_dssp SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC---------
T ss_pred CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC---------
Confidence 57999999998642 1224468999999999999998653 234689999997653210
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
| ....|+.||+..+.+.+..+ .++.+..++|+.|..+......
T Consensus 174 -~----------------------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--- 221 (280)
T 3nrc_A 174 -P----------------------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS--- 221 (280)
T ss_dssp -T----------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT---
T ss_pred -C----------------------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc---
Confidence 0 01369999999998887554 5899999999999886533211
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
............ .....+..++|+|++++.++..
T Consensus 222 ----~~~~~~~~~~~~---------~p~~~~~~pedvA~~v~~l~s~ 255 (280)
T 3nrc_A 222 ----NFKKMLDYNAMV---------SPLKKNVDIMEVGNTVAFLCSD 255 (280)
T ss_dssp ----THHHHHHHHHHH---------STTCSCCCHHHHHHHHHHTTSG
T ss_pred ----chHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCc
Confidence 111222222111 1123467899999999877654
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=98.54 E-value=9.2e-08 Score=106.79 Aligned_cols=69 Identities=16% Similarity=0.117 Sum_probs=55.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
+++++.+|++|+ +++..+++++|+|||+|+..... ..+.|+.++.+++++|++. ++++|||+||..++
T Consensus 52 ~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~ 119 (299)
T 2wm3_A 52 GAEVVQGDQDDQ------VIMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIK 119 (299)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHH
T ss_pred CCEEEEecCCCH------HHHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEcCcccc
Confidence 588999999984 47888889999999999853211 2356899999999999987 78999998887655
Q ss_pred c
Q psy13944 630 C 630 (1217)
Q Consensus 630 g 630 (1217)
+
T Consensus 120 ~ 120 (299)
T 2wm3_A 120 K 120 (299)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.7e-07 Score=99.27 Aligned_cols=67 Identities=16% Similarity=0.077 Sum_probs=52.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.+|++|++ + ..+.++|+|||+|+.... ....|+.+|.+++++|++. +.++||++||+.+
T Consensus 42 ~~~~~~~~D~~d~~------~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~ 106 (221)
T 3ew7_A 42 KDINILQKDIFDLT------L--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAAS 106 (221)
T ss_dssp SSSEEEECCGGGCC------H--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC-
T ss_pred CCCeEEeccccChh------h--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceE
Confidence 45889999999976 2 455889999999997432 2456999999999999986 6889999999866
Q ss_pred ec
Q psy13944 629 NC 630 (1217)
Q Consensus 629 ~g 630 (1217)
+.
T Consensus 107 ~~ 108 (221)
T 3ew7_A 107 LQ 108 (221)
T ss_dssp --
T ss_pred EE
Confidence 54
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=5.1e-07 Score=97.35 Aligned_cols=185 Identities=15% Similarity=0.075 Sum_probs=126.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+.-|....++|.+..... -.+.+.++.. ....++.++.+|++++ ++++.+++
T Consensus 6 lITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 6 VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA------ESVEEFSKKVLERFG 79 (235)
T ss_dssp EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH------HHHHHHCC-HHHHHS
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCH------HHHHHHHHHHHHhcC
Confidence 478888888899999988732211 1111111111 2245789999999998 88888876
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.+|++||+||..... +.++..+++|+.|+.++++++... .+-.++|.+||...... .|
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~----------~~--- 146 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL----------IP--- 146 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC----------CT---
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc----------CC---
Confidence 689999999975321 235578999999999999988542 12347788877654211 00
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
....|+.||+..+.+.+.+. .++.+..++|+.|-.+.....++
T Consensus 147 -------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~--------- 192 (235)
T 3l77_A 147 -------------------------YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG--------- 192 (235)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC---------
T ss_pred -------------------------CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC---------
Confidence 11369999999999988754 68999999999886654322110
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
......++..+|+|++++.++..+..
T Consensus 193 -----------------~~~~~~~~~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 193 -----------------KPKEKGYLKPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp -----------------CCGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred -----------------cccccCCCCHHHHHHHHHHHHcCCCC
Confidence 01112468899999999988876544
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.54 E-value=9.8e-07 Score=99.27 Aligned_cols=154 Identities=19% Similarity=0.147 Sum_probs=109.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----------------HHHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHH
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----------------FDRL---RKENANFTERIVVLTADLQSDGLGLDEKEKK 68 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----------------fd~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~ 68 (1217)
-+||+.+.-|....++|.+.....+ -+.+ .++....-.++.++.+|++++ ++++
T Consensus 32 lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~ 105 (299)
T 3t7c_A 32 FITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF------DAMQ 105 (299)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHH
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH------HHHH
Confidence 3788888889999999887432211 1111 111122346789999999998 7777
Q ss_pred HhcC-------CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCccccccc
Q psy13944 69 VLRE-------DVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNI 129 (1217)
Q Consensus 69 ~L~~-------~VDiViH~AA~v~f~--------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~ 129 (1217)
.+++ .+|++||+||..... +.++..+++|+.|+..+++++... ++-.++|++||...+...
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 185 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 6654 789999999975321 234578999999999999987542 234689999997653211
Q ss_pred ccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 130 KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 130 ~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
+ ....|+.||+..+.+.+..+ .++.+..++|+.|..+
T Consensus 186 ----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 227 (299)
T 3t7c_A 186 ----------E----------------------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATP 227 (299)
T ss_dssp ----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSST
T ss_pred ----------C----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCc
Confidence 0 01369999999998887654 5899999999999887
Q ss_pred CC
Q psy13944 205 VE 206 (1217)
Q Consensus 205 ~~ 206 (1217)
..
T Consensus 228 ~~ 229 (299)
T 3t7c_A 228 ML 229 (299)
T ss_dssp TT
T ss_pred cc
Confidence 54
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.54 E-value=3e-07 Score=102.28 Aligned_cols=200 Identities=13% Similarity=0.098 Sum_probs=126.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHh---hhcCcccCC---CeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRL---RKENANFTE---RIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~L---r~~~p~~~~---kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.-+||+.+.-|....++|.+..... + -+.+ .++...... ++.++.+|++++ ++++.+++
T Consensus 9 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~ 82 (280)
T 1xkq_A 9 VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE------DGQDQIINSTLK 82 (280)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH------HHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCH------HHHHHHHHHHHH
Confidence 4478998889999999998742211 0 1111 111111112 689999999998 77776654
Q ss_pred ---CccEEEEcCccCCc-------c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccc
Q psy13944 73 ---DVNIVFHVAATVKF-------D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 73 ---~VDiViH~AA~v~f-------~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
.+|+|||+||.... . +.++..+++|+.|+.++++++... .+ .++|++||..++....
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----- 156 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ----- 156 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC-----
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCC-----
Confidence 68999999997532 1 125578999999999999988642 13 6999999976543210
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
+ ....|+.||+..|.+.+..+ .++.+.+++|+.|.++......
T Consensus 157 ----~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 204 (280)
T 1xkq_A 157 ----P----------------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG 204 (280)
T ss_dssp ----C----------------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT
T ss_pred ----C----------------------------cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccc
Confidence 0 01369999999998887654 6899999999999887421100
Q ss_pred ccccccc-hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 211 MWVKGMN-GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 211 GWidn~~-g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.+ .... ........+... .....+..++|+|++++.++...
T Consensus 205 ~~-~~~~~~~~~~~~~~~~~---------~p~~~~~~pedvA~~v~~l~s~~ 246 (280)
T 1xkq_A 205 MP-DQASQKFYNFMASHKEC---------IPIGAAGKPEHIANIILFLADRN 246 (280)
T ss_dssp CC-HHHHHHHHHHHHHCTTT---------CTTSSCBCHHHHHHHHHHHHCHH
T ss_pred cc-cccccchHHHHHHHHcC---------CCCCCCCCHHHHHHHHHHhcCcc
Confidence 00 0000 000111111111 11235789999999998877544
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.53 E-value=2e-07 Score=102.16 Aligned_cols=152 Identities=15% Similarity=0.072 Sum_probs=105.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
-+||+.+.-|....++|.+..... + .+.+.++......++.++.+|++++ ++++.+++ +
T Consensus 6 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 6 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR------DQVFAAVEQARKTLGG 79 (256)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH------HHHHHHHHHHHHHTTC
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHHHhCC
Confidence 478888888888888888742211 0 1111111111234688999999998 77776665 7
Q ss_pred ccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CC-CCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+||.... . +.++..+++|+.|+.++++.+... .+ ..++|++||...+.. .|
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~-- 147 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG----------NP-- 147 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------CT--
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC----------CC--
Confidence 9999999997532 1 234578999999999988877542 12 469999999754321 00
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|.++
T Consensus 148 --------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 148 --------------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp --------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence 01369999999998887654 5899999999988775
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.52 E-value=1.9e-07 Score=103.79 Aligned_cols=192 Identities=12% Similarity=0.092 Sum_probs=122.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNI 76 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDi 76 (1217)
-+||+.+.-|....++|.+..... --+.+.+...+...++.++.+|++++ ++++.+++ .+|+
T Consensus 32 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 32 IVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDP------DSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSH------HHHHHHHHHHHHHHSCCCE
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCH------HHHHHHHHHHHHHcCCCCE
Confidence 478999999999999998743221 11222222122236789999999998 77777765 7899
Q ss_pred EEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc---CC--CCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 77 VFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM---KN--LDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 77 ViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~---~~--lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+||+||.... . +.++..+++|+.|+.++++++... .+ -.++|++||...+... +
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------~--- 172 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR----------P--- 172 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC----------T---
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC----------C---
Confidence 9999997532 1 234578999999999888877542 11 3589999997653211 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|..+...... ..
T Consensus 173 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~--- 221 (272)
T 4dyv_A 173 -------------------------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK---AG--- 221 (272)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc---cc---
Confidence 01369999999999887654 5899999999998876432211 00
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
. .... .......+..++|+|++++.++..+..
T Consensus 222 ---~--------~~~~--~~~~~~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 222 ---V--------PQAD--LSIKVEPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp ---------------------------CHHHHHHHHHHHHHSCTT
T ss_pred ---c--------hhhh--hcccccCCCCHHHHHHHHHHHhCCCCc
Confidence 0 0000 001123378999999999998876554
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.52 E-value=8.2e-07 Score=98.62 Aligned_cols=193 Identities=12% Similarity=0.002 Sum_probs=128.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+.... ...+.+.++....-.++.++.+|++++ ++++.+++
T Consensus 34 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 34 AFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDA------EAIEQAIRETVEAL 107 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHHHc
Confidence 347899988999999999873221 111122222222346789999999998 77777665
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.+|++||+||.... .+.++..+++|+.|+..+++++... ..-.++|++||...... +.|
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~---------~~~--- 175 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV---------PWP--- 175 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC---------CST---
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC---------CCC---
Confidence 78999999997532 1235678999999999999998653 34468999999643110 000
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..|.+.+..+ .++.+..++|+.|..+.....+.+
T Consensus 176 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~------ 224 (271)
T 3v2g_A 176 -------------------------GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH------ 224 (271)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS------
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh------
Confidence 01369999999998876654 589999999999988754321110
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
... .... .....+...+|+|++++.++....
T Consensus 225 ~~~----~~~~---------~~~~r~~~pedvA~~v~fL~s~~~ 255 (271)
T 3v2g_A 225 AEA----QRER---------IATGSYGEPQDIAGLVAWLAGPQG 255 (271)
T ss_dssp HHH----HHHT---------CTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHH----HHhc---------CCCCCCCCHHHHHHHHHHHhCccc
Confidence 011 1111 111236789999999888775433
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.52 E-value=4.5e-07 Score=100.20 Aligned_cols=195 Identities=15% Similarity=0.095 Sum_probs=127.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++... ...++.++.+|++++ ++++.+++
T Consensus 23 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 23 ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEP------DAPAELARRAAEAF 96 (266)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTST------THHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHHHc
Confidence 3478999889999999998743211 11111111111 245799999999998 66666554
Q ss_pred -CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++... +.-.++|++||...+... +
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 166 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL----------P 166 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------T
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC----------C
Confidence 78999999997532 1235578999999999999887542 123489999998654221 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|..+.....
T Consensus 167 ----------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------ 212 (266)
T 4egf_A 167 ----------------------------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV------ 212 (266)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH------
T ss_pred ----------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh------
Confidence 01369999999998876654 589999999998877532110
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.........+... .....+..++|+|++++.++....
T Consensus 213 -~~~~~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~ 249 (266)
T 4egf_A 213 -WGDEAKSAPMIAR---------IPLGRFAVPHEVSDAVVWLASDAA 249 (266)
T ss_dssp -TCSHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred -ccChHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchh
Confidence 0001111222221 122346789999999988776543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.52 E-value=4.7e-07 Score=100.26 Aligned_cols=193 Identities=14% Similarity=0.107 Sum_probs=129.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... + -+.+.+ ....++.++.+|++++ ++++.+++ .+|
T Consensus 19 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD 89 (266)
T 3p19_A 19 VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA---LNLPNTLCAQVDVTDK------YTFDTAITRAEKIYGPAD 89 (266)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT---TCCTTEEEEECCTTCH------HHHHHHHHHHHHHHCSEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---hhcCCceEEEecCCCH------HHHHHHHHHHHHHCCCCC
Confidence 3489999999999999998854331 1 122222 1234789999999998 77776665 789
Q ss_pred EEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
++||+||.... . +.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 90 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------~----- 154 (266)
T 3p19_A 90 AIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF----------P----- 154 (266)
T ss_dssp EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------T-----
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC----------C-----
Confidence 99999997532 1 234578999999999977776421 245799999997654221 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|..+...... . ....
T Consensus 155 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~--~~~~ 206 (266)
T 3p19_A 155 -----------------------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT---S--QQIK 206 (266)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS---C--HHHH
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc---c--hhhh
Confidence 01369999999998876654 5899999999999886432211 0 0000
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
........ ....++.++|||++++.++..+..
T Consensus 207 ~~~~~~~~-----------~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 207 DGYDAWRV-----------DMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHHHHH-----------HTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHhhcc-----------cccCCCCHHHHHHHHHHHHcCCCC
Confidence 11111000 112478999999999998876544
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.52 E-value=8.4e-07 Score=97.92 Aligned_cols=185 Identities=12% Similarity=0.048 Sum_probs=118.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHH----hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDR----LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~----Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... +.++ +.+... ..++.++.+|++++ ++++.+++ .+|
T Consensus 30 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD 101 (260)
T 3gem_A 30 ILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR--QAGAVALYGDFSCE------TGIMAFIDLLKTQTSSLR 101 (260)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH--HHTCEEEECCTTSH------HHHHHHHHHHHHHCSCCS
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--hcCCeEEECCCCCH------HHHHHHHHHHHHhcCCCC
Confidence 3489999999999999998743321 1110 111000 12478999999998 77766654 689
Q ss_pred EEEEcCccCCcc------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 76 IVFHVAATVKFD------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 76 iViH~AA~v~f~------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
+|||+||..... +.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 102 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~------ 165 (260)
T 3gem_A 102 AVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS----------S------ 165 (260)
T ss_dssp EEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC----------S------
T ss_pred EEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC----------C------
Confidence 999999975321 224478999999999999887542 244689999997653221 0
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
....|+.||+..|.+.+.++ +++.+..++|+.|..+...+ + ..
T Consensus 166 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-~----------~~ 212 (260)
T 3gem_A 166 ----------------------KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD-A----------AY 212 (260)
T ss_dssp ----------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------
T ss_pred ----------------------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-H----------HH
Confidence 01369999999998887654 56899999999887653211 0 01
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHH
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAA 258 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa 258 (1217)
....... ....-+..++|+|++++.++
T Consensus 213 ~~~~~~~---------~p~~r~~~~edva~~v~~L~ 239 (260)
T 3gem_A 213 RANALAK---------SALGIEPGAEVIYQSLRYLL 239 (260)
T ss_dssp ----------------CCSCCCCCTHHHHHHHHHHH
T ss_pred HHHHHhc---------CCCCCCCCHHHHHHHHHHHh
Confidence 1111111 11123556899999998887
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.51 E-value=4.2e-07 Score=100.62 Aligned_cols=194 Identities=12% Similarity=0.082 Sum_probs=125.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h----HHHhh---hcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A----FDRLR---KEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr---~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... + -+.+. ++. .....++.++.+|++++ ++++.+++
T Consensus 24 ~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 24 ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY------EEVKKLLEAVKEKF 97 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 3478999999999999998742211 0 11111 111 11134688999999998 77776654
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCccc-ccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYS-NCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p 140 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++++.. + .+..++|++||..+ .. +.+
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~~ 167 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV----------TMP 167 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----------CSS
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc----------CCC
Confidence 689999999975321 23457889999999999888742 1 34579999999763 11 000
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|..+.... +..
T Consensus 168 ----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~- 215 (267)
T 1vl8_A 168 ----------------------------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA---VFS- 215 (267)
T ss_dssp ----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH---HHT-
T ss_pred ----------------------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc---ccc-
Confidence 01369999999999887654 58999999999887763211 000
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. ......+.... ....++..+|+|++++.++...
T Consensus 216 --~-~~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~ 249 (267)
T 1vl8_A 216 --D-PEKLDYMLKRI---------PLGRTGVPEDLKGVAVFLASEE 249 (267)
T ss_dssp --C-HHHHHHHHHTC---------TTSSCBCGGGGHHHHHHHHSGG
T ss_pred --C-hHHHHHHHhhC---------CCCCCcCHHHHHHHHHHHcCcc
Confidence 0 11111111111 1123788999999998877543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.9e-07 Score=101.04 Aligned_cols=155 Identities=15% Similarity=0.165 Sum_probs=109.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
-+||+.+.-|....++|.+.... .-.+.+.++......++.++.+|++++ ++++.+++ .
T Consensus 32 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 32 LITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE------LQMRNAVRDLVLKFGH 105 (283)
T ss_dssp EEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCH------HHHHHHHHHHHHHHSC
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHHhCC
Confidence 47899999999999999874221 111222222223345789999999998 77776664 6
Q ss_pred ccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 74 VNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 74 VDiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
+|++||+||.... . +.++..+++|+.|+.++++++ ++ .+..++|++||....... +.|
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~Iv~isS~~~~~~~--------~~~- 175 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ-RGGGAIVVVSSINGTRTF--------TTP- 175 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCSBTTTBC--------CST-
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCceEEEEcChhhccCC--------CCC-
Confidence 8999999997532 1 234578999999999999988 33 245699999997653210 000
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~ 206 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|..+..
T Consensus 176 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 218 (283)
T 3v8b_A 176 ---------------------------GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNIS 218 (283)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTT
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcc
Confidence 01369999999998887654 578999999999987654
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.51 E-value=4.5e-07 Score=100.37 Aligned_cols=201 Identities=15% Similarity=0.095 Sum_probs=129.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+.-|....++|.+..... ..+.+.++......++.++.+|++++ ++++.+++
T Consensus 22 lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 22 LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV------PEIVKLFDQAVAHFG 95 (270)
T ss_dssp EESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH------HHHHHHHHHHHHHHS
T ss_pred EEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 379999999999999998743221 11222222223346789999999998 77776664
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++... ..-.++|++||...... +.|
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------~~~---- 162 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF---------SVP---- 162 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC---------CCT----
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC---------CCC----
Confidence 67999999998642 1235578999999999999998763 22348999999752110 000
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc-ccccc--c
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP-MWVKG--M 216 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p-GWidn--~ 216 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|..+...... .+... .
T Consensus 163 ------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 218 (270)
T 3is3_A 163 ------------------------KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTS 218 (270)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGG
T ss_pred ------------------------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccc
Confidence 01369999999998887654 5899999999999887432110 00000 0
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
............. .....+...+|+|++++.++...
T Consensus 219 ~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~L~s~~ 254 (270)
T 3is3_A 219 YTAEQRQQMAAHA---------SPLHRNGWPQDVANVVGFLVSKE 254 (270)
T ss_dssp SCHHHHHHHHHHH---------STTCSCBCHHHHHHHHHHHTSGG
T ss_pred cchHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCc
Confidence 0111111111111 12234678999999998877543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.51 E-value=3.1e-07 Score=101.15 Aligned_cols=186 Identities=12% Similarity=0.100 Sum_probs=121.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 32 vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 32 AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS------DAIAAFATGVLAAHG 105 (262)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCH------HHHHHHHHHHHHhcC
Confidence 3478999999999999998743211 11112222122345789999999998 77766654
Q ss_pred CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+||... +. +.++..+++|+.|+.++++.+... .+..++|++||...+... +
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 174 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV----------A- 174 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC----------T-
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC----------C-
Confidence 5899999999732 11 234578999999999999887531 345699999997653210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..|.+++.++ .++.+.+++|+.|-.+......
T Consensus 175 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------ 221 (262)
T 3rkr_A 175 ---------------------------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS------ 221 (262)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------
T ss_pred ---------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc------
Confidence 01369999999998886654 5899999999988665321100
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
. ......++..+|+|++++.++.....
T Consensus 222 -----------~---------~~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 222 -----------A---------KKSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp ---------------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred -----------c---------ccccccCCCHHHHHHHHHHHhcCccc
Confidence 0 01123467899999999888765433
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.50 E-value=4.8e-07 Score=100.65 Aligned_cols=194 Identities=11% Similarity=0.041 Sum_probs=124.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HH---hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DR---LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... +. +. +.++... ..++.++.+|++++ ++++.+++
T Consensus 32 vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 32 ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-YGDCQAIPADLSSE------AGARRLAQALGELSA 104 (276)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-SSCEEECCCCTTSH------HHHHHHHHHHHHHCS
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCceEEEEeeCCCH------HHHHHHHHHHHHhcC
Confidence 3478999999999999998742211 11 11 1111111 12788999999998 77766654
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CC----CCeEEEEcCcccccccccccccccC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KN----LDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~----lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|+|||+||.... .+.++..+++|+.|+.++++++... .+ ..++|++||...+....
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~-------- 176 (276)
T 2b4q_A 105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG-------- 176 (276)
T ss_dssp CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC--------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC--------
Confidence 78999999997532 1235688999999998888876421 12 26999999986643210
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
.....|+.||+..|.+.+.++ .++.+.+++|+.|..+.... +.
T Consensus 177 -----------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~ 224 (276)
T 2b4q_A 177 -----------------------------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IA 224 (276)
T ss_dssp -----------------------------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HH
T ss_pred -----------------------------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh---cc
Confidence 011269999999999887654 58999999999987764211 00
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.. ....+... . ......+...+|+|++++.++...
T Consensus 225 ~~------~~~~~~~~--~-----~~p~~r~~~p~dvA~~v~~l~s~~ 259 (276)
T 2b4q_A 225 ND------PQALEADS--A-----SIPMGRWGRPEEMAALAISLAGTA 259 (276)
T ss_dssp HC------HHHHHHHH--H-----TSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred hh------HHHHHHhh--c-----CCCCCCcCCHHHHHHHHHHHhCcc
Confidence 00 01111110 0 001134789999999999887543
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.50 E-value=2.9e-07 Score=100.49 Aligned_cols=188 Identities=11% Similarity=0.059 Sum_probs=122.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH~ 80 (1217)
.-+||+.+.-|....++|.+.... +.-.-| .++..+++..+.+|++++ ++++.+++ .+|+|||+
T Consensus 18 vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r--~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 18 VLVTGGNRGIGLAIAQRLAADGHK-VAVTHR--GSGAPKGLFGVEVDVTDS------DAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCE-EEEEES--SSCCCTTSEEEECCTTCH------HHHHHHHHHHHHHHSSCSEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCE-EEEEeC--ChHHHHHhcCeeccCCCH------HHHHHHHHHHHHHcCCCCEEEEC
Confidence 347999999999999999874322 211111 223334444588999987 77766654 57999999
Q ss_pred CccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 81 AATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 81 AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
||.... .+.++..+++|+.|+.++++++... .+..++|++||...... .+
T Consensus 89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~---------- 148 (247)
T 1uzm_A 89 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG----------IG---------- 148 (247)
T ss_dssp CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------------------
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC----------CC----------
Confidence 997532 1235678999999999999987531 35579999999754321 00
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|.++.... .. ......
T Consensus 149 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~--~~~~~~ 201 (247)
T 1uzm_A 149 ------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-------LD--ERIQQG 201 (247)
T ss_dssp ------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-------SC--HHHHHH
T ss_pred ------------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-------cC--HHHHHH
Confidence 01369999998888776643 58999999999886642110 10 111111
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.... .....+++++|+|++++.++..
T Consensus 202 ~~~~---------~p~~~~~~~~dvA~~~~~l~s~ 227 (247)
T 1uzm_A 202 ALQF---------IPAKRVGTPAEVAGVVSFLASE 227 (247)
T ss_dssp HGGG---------CTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHhc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 1111 1113478999999999887754
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.1e-06 Score=95.76 Aligned_cols=189 Identities=15% Similarity=0.036 Sum_probs=123.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... +. +.+.+..... .+.++.+|++++ ++++.+++ .+|
T Consensus 8 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id 79 (245)
T 1uls_A 8 VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--GAHPVVMDVADP------ASVERGFAEALAHLGRLD 79 (245)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--TCEEEECCTTCH------HHHHHHHHHHHHHHSSCC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCEEEEecCCCH------HHHHHHHHHHHHHcCCCC
Confidence 4478999999999999998743221 11 1121111111 378899999998 77766654 489
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...++. +
T Consensus 80 ~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~----- 143 (245)
T 1uls_A 80 GVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-----------L----- 143 (245)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-----------T-----
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC-----------C-----
Confidence 99999997532 1235578999999999999887542 24579999999763221 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
....|+.||+..+.+.+..+ .++.+.+++|+.|..+..... . .
T Consensus 144 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~--~ 191 (245)
T 1uls_A 144 -----------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-------P--E 191 (245)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-------C--H
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-------C--H
Confidence 01359999998888776543 589999999999877643211 1 1
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.......... + ...++..+|+|++++.++...
T Consensus 192 ~~~~~~~~~~----p-----~~~~~~~~dvA~~v~~l~s~~ 223 (245)
T 1uls_A 192 KVREKAIAAT----P-----LGRAGKPLEVAYAALFLLSDE 223 (245)
T ss_dssp HHHHHHHHTC----T-----TCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHhhC----C-----CCCCcCHHHHHHHHHHHhCch
Confidence 1111111110 1 113788999999998877643
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=98.49 E-value=2.3e-07 Score=98.76 Aligned_cols=115 Identities=6% Similarity=-0.086 Sum_probs=81.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.+|++|++ + ..+.++|+|||+||...... ...+|+.||.+++++|++. + ++||++||+.+
T Consensus 43 ~~~~~~~~D~~d~~------~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~ 108 (224)
T 3h2s_A 43 ATVATLVKEPLVLT------E--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSAS 108 (224)
T ss_dssp TTSEEEECCGGGCC------H--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGG
T ss_pred CCceEEeccccccc------H--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEeccee
Confidence 46899999999976 2 45689999999999762111 2467999999999999987 5 89999999755
Q ss_pred ecCcc-----cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCC
Q psy13944 629 NCNIK-----KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHD 703 (1217)
Q Consensus 629 ~g~~~-----~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~ 703 (1217)
+.... ..+|...+. ..+.|+.||+.+|.+. .+ ....+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~-----------------------------~~~~y~~sK~~~e~~~-~~--------~~~~~ 150 (224)
T 3h2s_A 109 LAMPGADHPMILDFPESAA-----------------------------SQPWYDGALYQYYEYQ-FL--------QMNAN 150 (224)
T ss_dssp SBCTTCSSCGGGGCCGGGG-----------------------------GSTTHHHHHHHHHHHH-HH--------TTCTT
T ss_pred eccCCCCccccccCCCCCc-----------------------------cchhhHHHHHHHHHHH-HH--------HhcCC
Confidence 43221 111111110 1245999999999653 11 12458
Q ss_pred CceeEeccCccc
Q psy13944 704 RGVRVCRNHPVG 715 (1217)
Q Consensus 704 l~~~i~rp~~v~ 715 (1217)
+++.++||..|-
T Consensus 151 i~~~ivrp~~v~ 162 (224)
T 3h2s_A 151 VNWIGISPSEAF 162 (224)
T ss_dssp SCEEEEEECSBC
T ss_pred CcEEEEcCcccc
Confidence 999999999885
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.49 E-value=4.1e-07 Score=101.27 Aligned_cols=193 Identities=16% Similarity=0.119 Sum_probs=128.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------D 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~ 73 (1217)
-+||+.+.-|....++|.+.... .-.+.+.++....-.++.++.+|++++ ++++.+++ .
T Consensus 36 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 36 LITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQP------DQVRGMLDQMTGELGG 109 (276)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCH------HHHHHHHHHHHHHHSC
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHHcCC
Confidence 37899999999999999874321 111222222222345789999999998 77777765 7
Q ss_pred ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|++||+||..... +.++..+++|+.|+.++++++... +.-.++|++||...+.... +.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~-------~~--- 179 (276)
T 3r1i_A 110 IDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI-------PQ--- 179 (276)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC-------SS---
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC-------CC---
Confidence 89999999986431 234577899999999999887542 1125799999976532110 00
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.-..|+.||+..+.+.+..+ .++.+..++|+.|..+...+.+.
T Consensus 180 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~------ 227 (276)
T 3r1i_A 180 --------------------------QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD------ 227 (276)
T ss_dssp --------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG------
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH------
Confidence 01369999999998887654 58999999999998875433211
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
........ .....+...+|+|++++.++....
T Consensus 228 ----~~~~~~~~---------~p~~r~~~pedvA~~v~fL~s~~~ 259 (276)
T 3r1i_A 228 ----YHALWEPK---------IPLGRMGRPEELTGLYLYLASAAS 259 (276)
T ss_dssp ----GHHHHGGG---------STTSSCBCGGGSHHHHHHHHSGGG
T ss_pred ----HHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccc
Confidence 11111111 112346788999999988776543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-06 Score=97.52 Aligned_cols=202 Identities=17% Similarity=0.056 Sum_probs=127.8
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh---------------------HHH---hhhcCcccCCCeEEEEccCCCCCCCCCH
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA---------------------FDR---LRKENANFTERIVVLTADLQSDGLGLDE 64 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v---------------------fd~---Lr~~~p~~~~kI~~V~GDl~d~~LGLs~ 64 (1217)
-+||+.+.-|....++|.+.....+ -+. +.++......++.++.+|++++
T Consensus 15 lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------ 88 (286)
T 3uve_A 15 FVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY------ 88 (286)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH------
T ss_pred EEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH------
Confidence 3788888888888888887422211 111 1111122346799999999998
Q ss_pred HHHHHhcC-------CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCccc
Q psy13944 65 KEKKVLRE-------DVNIVFHVAATVKFD--------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYS 125 (1217)
Q Consensus 65 edl~~L~~-------~VDiViH~AA~v~f~--------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v 125 (1217)
++++.+++ .+|++||+||..... +.++..+++|+.|+.++++++... +.-.++|++||...
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG 168 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence 77776664 789999999975321 234578999999999999987542 12348999999765
Q ss_pred ccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecce
Q psy13944 126 NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSI 200 (1217)
Q Consensus 126 ~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsi 200 (1217)
+... | ....|+.||+..+.+.+.++ .++.+..++|+.
T Consensus 169 ~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~ 210 (286)
T 3uve_A 169 LKAY----------P----------------------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTH 210 (286)
T ss_dssp TSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred ccCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCc
Confidence 3210 0 01369999999988886654 579999999999
Q ss_pred eccCCCCCCcc---cccc--cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 201 VMPVVEEPCPM---WVKG--MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 201 V~G~~~eP~pG---Widn--~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
|..+....... +... ...+.......... . .....+...+|+|++++.++....
T Consensus 211 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~p~r~~~p~dvA~~v~fL~s~~a 269 (286)
T 3uve_A 211 VKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF-------H-TLPIPWVEPIDISNAVLFFASDEA 269 (286)
T ss_dssp BSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTT-------C-SSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred ccCCcccccchhhhccccccccchhhHHHHHHhh-------h-ccCCCcCCHHHHHHHHHHHcCccc
Confidence 98875432100 0000 00011111000000 0 111457899999999988876443
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.48 E-value=4.3e-07 Score=100.84 Aligned_cols=191 Identities=7% Similarity=0.046 Sum_probs=124.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------CccEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------DVNIV 77 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------~VDiV 77 (1217)
-+||+.+.-|....++|.+..... --+.+.+...+...++.++.+|++++ ++++.+++ .+|+|
T Consensus 34 lVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 34 IVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSE------DSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH------HHHHHHHHHHTTSSEEEEE
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCH------HHHHHHHHHHHHhCCCCeE
Confidence 488999999999999998743221 11222221122345799999999998 77766554 57999
Q ss_pred EEcCccCCc----------cc---CHHHHHHHHHHHHHHHHHHhHhc---------CCCCeEEEEcCccccccccccccc
Q psy13944 78 FHVAATVKF----------DE---HFQTAFEINCKGTEKLLKMAEEM---------KNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 78 iH~AA~v~f----------~e---~l~~a~~vNV~GT~~LLelAk~~---------~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
||+||.... .. .++..+++|+.|+.++++++... .+-.++|++||...+...
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 181 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ------ 181 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC------
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC------
Confidence 999554321 11 25688999999999999987632 123489999998654221
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
+ ....|+.||+..+.+.+..+ .++.+..++|+.|..+....
T Consensus 182 ----~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-- 227 (281)
T 3ppi_A 182 ----I----------------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-- 227 (281)
T ss_dssp ----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--
T ss_pred ----C----------------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc--
Confidence 0 01369999998887776543 57999999999886653211
Q ss_pred ccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 211 GWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.. ......+..+. .....++.++|+|++++.++..
T Consensus 228 -----~~--~~~~~~~~~~~--------~~~~~~~~pedvA~~v~~l~s~ 262 (281)
T 3ppi_A 228 -----VG--EEALAKFAANI--------PFPKRLGTPDEFADAAAFLLTN 262 (281)
T ss_dssp -----TC--HHHHHHHHHTC--------CSSSSCBCHHHHHHHHHHHHHC
T ss_pred -----cc--HHHHHHHHhcC--------CCCCCCCCHHHHHHHHHHHHcC
Confidence 11 11222222221 1114578999999999988764
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.48 E-value=4.1e-07 Score=100.32 Aligned_cols=198 Identities=9% Similarity=0.004 Sum_probs=123.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HH---hhhcCccc--CCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DR---LRKENANF--TERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~---Lr~~~p~~--~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|....++|.+..... +. +. +.++.... ..++.++.+|++++ ++++.+++
T Consensus 16 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 16 VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE------AQVEAYVTATTER 89 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH------HHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCH------HHHHHHHHHHHHH
Confidence 3478999889999999998742211 01 11 11111111 35789999999998 77776665
Q ss_pred --CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 --DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 --~VDiViH~AA~v~f--------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|+|||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+...
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 159 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---------- 159 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC----------
Confidence 68999999997533 1235578999999988766655321 245799999997653210
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc-ccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP-MWV 213 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p-GWi 213 (1217)
+ ....|+.||+..|.+.+..+ .++.+.+++|+.|.++...... ...
T Consensus 160 ~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~ 211 (267)
T 1iy8_A 160 G----------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLD 211 (267)
T ss_dssp S----------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHC
T ss_pred C----------------------------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccC
Confidence 0 01369999999998887553 5899999999998876321000 000
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
... .......+... .....+...+|+|++++.++..
T Consensus 212 ~~~--~~~~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~ 247 (267)
T 1iy8_A 212 PEN--PRKAAEEFIQV---------NPSKRYGEAPEIAAVVAFLLSD 247 (267)
T ss_dssp TTC--HHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHTSG
T ss_pred hhh--hhhHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 000 00000011111 1123478999999999887654
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=4e-07 Score=100.92 Aligned_cols=189 Identities=16% Similarity=0.069 Sum_probs=123.9
Q ss_pred CcccCCC--CCCcccHHHHHHHHhcC--------h---hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 8 LGHNGAK--TCKHNSILWVAKDFFAD--------D---AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 8 ~g~tg~r--~kkg~~~~eRL~~~l~~--------~---vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
.-+||+. +.-|....++|.+.... . ..+.+.+. ..++.++.+|++++ ++++.+++
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~----~~~~~~~~~D~~~~------~~v~~~~~~~ 78 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE----LNSPYVYELDVSKE------EHFKSLYNSV 78 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH----TTCCCEEECCTTCH------HHHHHHHHHH
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEcCCCCH------HHHHHHHHHH
Confidence 3478887 78888888888763221 1 11222221 12478899999998 77766654
Q ss_pred -----CccEEEEcCccCCc--------c---cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccccccc
Q psy13944 73 -----DVNIVFHVAATVKF--------D---EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 73 -----~VDiViH~AA~v~f--------~---e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
.+|+|||+||.... + +.++..+++|+.|+.++++++... ..-.++|++||......
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------- 151 (275)
T 2pd4_A 79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY------- 151 (275)
T ss_dssp HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-------
T ss_pred HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-------
Confidence 67999999997542 1 234578999999999999998763 11248999999754321
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
.+ ....|+.||+..+.+.+.++ .++.+.+++|+.|.++.....+
T Consensus 152 ---~~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 200 (275)
T 2pd4_A 152 ---MA----------------------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA 200 (275)
T ss_dssp ---CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST
T ss_pred ---CC----------------------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc
Confidence 00 01359999999998887654 5899999999999887532211
Q ss_pred ccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 211 GWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
........+.... ...-+...+|+|++++.++..
T Consensus 201 -------~~~~~~~~~~~~~---------p~~~~~~p~dva~~~~~l~s~ 234 (275)
T 2pd4_A 201 -------DFRMILKWNEINA---------PLRKNVSLEEVGNAGMYLLSS 234 (275)
T ss_dssp -------THHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSG
T ss_pred -------ccHHHHHHHHhcC---------CcCCCCCHHHHHHHHHHHhCc
Confidence 1111221111110 012357899999999988754
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-06 Score=97.89 Aligned_cols=192 Identities=15% Similarity=0.062 Sum_probs=125.9
Q ss_pred ccCCCC--CCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 10 HNGAKT--CKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 10 ~tg~r~--kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
+||+.+ .-|....++|.+..... .-+.+.+.. ....++.++.+|++++ ++++.+++
T Consensus 35 VTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 35 IIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLA-ESLGVKLTVPCDVSDA------ESVDNMFKVLAEEWG 107 (296)
T ss_dssp EECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH-HHHTCCEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH-HhcCCeEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 788876 67888888888743221 111111111 1123468999999998 77777664
Q ss_pred CccEEEEcCccCCc--------c---cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKF--------D---EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f--------~---e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+||.... + +.+...+++|+.|+.++++++... ..-.++|++||...+... +
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~----------~ 177 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV----------P 177 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC----------T
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC----------C
Confidence 67999999997532 1 235578999999999999998753 223489999997653210 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..+.+.+.++ .++.+..++|+.|..+.....
T Consensus 178 ----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~------ 223 (296)
T 3k31_A 178 ----------------------------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI------ 223 (296)
T ss_dssp ----------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC------
T ss_pred ----------------------------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc------
Confidence 11469999999998887654 589999999999988754321
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.............. ....+...+|+|++++.++....
T Consensus 224 -~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~fL~s~~a 260 (296)
T 3k31_A 224 -SDFHYILTWNKYNS---------PLRRNTTLDDVGGAALYLLSDLG 260 (296)
T ss_dssp -HHHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGG
T ss_pred -cchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCcc
Confidence 11112222221111 11236778999999998876533
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.1e-06 Score=98.80 Aligned_cols=193 Identities=13% Similarity=0.076 Sum_probs=124.2
Q ss_pred cccCCCCC--CcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 9 GHNGAKTC--KHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 9 g~tg~r~k--kg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
-+||+.+. -|....++|.+.....+ -+.+.+. .....++.++.+|++++ ++++.+++
T Consensus 35 lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 35 LILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPL-AEELGAFVAGHCDVADA------ASIDAVFETLEKKW 107 (293)
T ss_dssp EEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH-HHHHTCEEEEECCTTCH------HHHHHHHHHHHHHT
T ss_pred EEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-HHhcCCceEEECCCCCH------HHHHHHHHHHHHhc
Confidence 37888865 78888888887432211 1111111 11124688999999998 77776654
Q ss_pred -CccEEEEcCccCC-------c----ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 -DVNIVFHVAATVK-------F----DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 -~VDiViH~AA~v~-------f----~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|++||+||... + .+.++..+++|+.|+.++++++... ..-.++|++||...+....
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~--------- 178 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP--------- 178 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT---------
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC---------
Confidence 6899999999763 1 1235578999999999999998752 3335899999976543210
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
.-..|+.||+..+.+.+.++ .++.+..++|+.|..+......
T Consensus 179 -----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---- 225 (293)
T 3grk_A 179 -----------------------------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG---- 225 (293)
T ss_dssp -----------------------------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C----
T ss_pred -----------------------------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc----
Confidence 01469999999998887654 5899999999999886543211
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
............ .....+...+|+|++++.++....
T Consensus 226 ---~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~ 261 (293)
T 3grk_A 226 ---DFRYILKWNEYN---------APLRRTVTIDEVGDVGLYFLSDLS 261 (293)
T ss_dssp ---CHHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGGG
T ss_pred ---chHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCccc
Confidence 111122221111 111336789999999988776533
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.46 E-value=6.9e-07 Score=99.17 Aligned_cols=202 Identities=18% Similarity=0.093 Sum_probs=126.8
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh---------------------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHH
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA---------------------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEK 67 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v---------------------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl 67 (1217)
-+||+.+.-|....++|.+.....+ .+.+.+.......++.++.+|++++ +++
T Consensus 15 lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v 88 (277)
T 3tsc_A 15 FITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF------DRL 88 (277)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHH
T ss_pred EEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH------HHH
Confidence 3788888888888888887432211 1111111122346789999999998 777
Q ss_pred HHhcC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCccccccc
Q psy13944 68 KVLRE-------DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNI 129 (1217)
Q Consensus 68 ~~L~~-------~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~ 129 (1217)
+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... +.-.++|++||...+...
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 168 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ 168 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC
Confidence 76654 589999999986431 235578999999999999886532 223589999997653221
Q ss_pred ccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 130 KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 130 ~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
| ....|+.||+..+.+.+..+ .++.+..++|+.|..+
T Consensus 169 ----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 210 (277)
T 3tsc_A 169 ----------P----------------------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTP 210 (277)
T ss_dssp ----------S----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSG
T ss_pred ----------C----------------------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCC
Confidence 0 01369999999998887654 5799999999988776
Q ss_pred CCCCCcccccccchhHHHHHHHhcC-ceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 205 VEEPCPMWVKGMNGLTAMYVAVGLG-IMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 205 ~~eP~pGWidn~~g~~~li~~~~~G-~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
.... ............. ........... .-+...+|+|++++.++.....
T Consensus 211 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~~L~s~~~~ 261 (277)
T 3tsc_A 211 MGSG--------DMVTAVGQAMETNPQLSHVLTPFLP-DWVAEPEDIADTVCWLASDESR 261 (277)
T ss_dssp GGSH--------HHHHHHHHHHHTCGGGTTTTCCSSS-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred cccc--------hhhhhhhhcccccHHHHHHhhhccC-CCCCCHHHHHHHHHHHhCcccc
Confidence 3211 0001111111010 00000011111 1378999999999988765443
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.3e-07 Score=99.86 Aligned_cols=189 Identities=14% Similarity=0.114 Sum_probs=124.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH~ 80 (1217)
.-+||+.+.-|....++|.+.... +.-.-| .++..+++.++.+|++++ ++++.+++ .+|+|||+
T Consensus 24 vlVTGas~gIG~aia~~l~~~G~~-V~~~~r--~~~~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~iD~lv~n 94 (253)
T 2nm0_A 24 VLVTGGNRGIGLAIARAFADAGDK-VAITYR--SGEPPEGFLAVKCDITDT------EQVEQAYKEIEETHGPVEVLIAN 94 (253)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCE-EEEEES--SSCCCTTSEEEECCTTSH------HHHHHHHHHHHHHTCSCSEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCE-EEEEeC--ChHhhccceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEEC
Confidence 447899999999999999875332 211111 233345688999999998 77766654 47999999
Q ss_pred CccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 81 AATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 81 AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
||.... .+.++..+++|+.|+.++++++... .+..++|++||...+... +.
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------------~~------ 155 (253)
T 2nm0_A 95 AGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-------------AG------ 155 (253)
T ss_dssp CSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-------------HH------
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-------------CC------
Confidence 997532 2356789999999999999877542 245699999997653210 00
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
...|+.||+..|.+.+..+ .++.+.+++|+.|..+.....+ + .....
T Consensus 156 -------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~------~~~~~ 207 (253)
T 2nm0_A 156 -------------------QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT---D------EQRAN 207 (253)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------------CHHH
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC---H------HHHHH
Confidence 0259999999988876643 6799999999988665321100 0 00111
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
+... .....++..+|+|++++.++...
T Consensus 208 ~~~~---------~p~~~~~~p~dvA~~i~~l~s~~ 234 (253)
T 2nm0_A 208 IVSQ---------VPLGRYARPEEIAATVRFLASDD 234 (253)
T ss_dssp HHTT---------CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHhc---------CCCCCCcCHHHHHHHHHHHhCcc
Confidence 1111 11124789999999998877653
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.9e-07 Score=102.86 Aligned_cols=152 Identities=12% Similarity=0.082 Sum_probs=104.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHh---hhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRL---RKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~L---r~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|....++|.+..... +. +.+ .++... ...++.++.+|++++ ++++.+++
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ------QQLRDTFRKVVDH 83 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH------HHHHHHHHHHHHH
T ss_pred EEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCH------HHHHHHHHHHHHH
Confidence 4478998889999999998742211 01 111 111111 123688999999998 77776654
Q ss_pred --CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHH----hHhcC--CCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 73 --DVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKM----AEEMK--NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 73 --~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLel----Ak~~~--~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
.+|+|||+||... .+.++..+++|+.|+..+.+. +++.+ ...++|++||..++... +
T Consensus 84 ~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~---- 148 (267)
T 2gdz_A 84 FGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----------A---- 148 (267)
T ss_dssp HSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------T----
T ss_pred cCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC----------C----
Confidence 4799999999764 456788999999976655444 43321 15689999998764321 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHh------c-CCCCEEEEecceeccC
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREK------M-DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~------~-~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..|.+.+.+ . .++.+.+++|+.|.++
T Consensus 149 ------------------------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 149 ------------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred ------------------------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence 0135999999999888752 2 6899999999998775
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.46 E-value=3.9e-07 Score=97.74 Aligned_cols=182 Identities=13% Similarity=0.040 Sum_probs=117.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---CccEEEEcCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVNIVFHVAAT 83 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VDiViH~AA~ 83 (1217)
.-+||+.+.-|....++|.+.... .+.++ . +. +|++++ ++++.+++ .+|++||+||.
T Consensus 9 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r--~--~~---------~D~~~~------~~v~~~~~~~g~id~lv~nAg~ 69 (223)
T 3uce_A 9 YVVLGGTSGIGAELAKQLESEHTIVHVASR--Q--TG---------LDISDE------KSVYHYFETIGAFDHLIVTAGS 69 (223)
T ss_dssp EEEETTTSHHHHHHHHHHCSTTEEEEEESG--G--GT---------CCTTCH------HHHHHHHHHHCSEEEEEECCCC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEecC--C--cc---------cCCCCH------HHHHHHHHHhCCCCEEEECCCC
Confidence 347888888888888887543221 11111 1 00 788887 77776654 68999999997
Q ss_pred CCc-----c---cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 84 VKF-----D---EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 84 v~f-----~---e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
... + +.++..+++|+.|+.++++++... ..-.++|++||...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------------------ 125 (223)
T 3uce_A 70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA------------------------ 125 (223)
T ss_dssp CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT------------------------
T ss_pred CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC------------------------
Confidence 521 1 234578999999999999998753 1123899999976543210
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCce
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIM 231 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l 231 (1217)
....|+.||+..|.+.+.++ ..+.+..++|+.|..+...... . .....+......+
T Consensus 126 --------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~---~--~~~~~~~~~~~~~-- 184 (223)
T 3uce_A 126 --------------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMN---A--DDRDAMYQRTQSH-- 184 (223)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSC---H--HHHHHHHHHHHHH--
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcc---h--hhHHHHHHHHhhc--
Confidence 01369999999999887765 3388999999999876433211 0 0111122222221
Q ss_pred eEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 232 RTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 232 ~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.....+..++|+|++++.++..
T Consensus 185 -------~~~~~~~~~~dvA~~~~~l~~~ 206 (223)
T 3uce_A 185 -------LPVGKVGEASDIAMAYLFAIQN 206 (223)
T ss_dssp -------STTCSCBCHHHHHHHHHHHHHC
T ss_pred -------CCCCCccCHHHHHHHHHHHccC
Confidence 1223578899999999887763
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.4e-07 Score=100.55 Aligned_cols=193 Identities=13% Similarity=0.037 Sum_probs=125.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+.... ...+.+.++......++.++.+|++++ ++++.+++
T Consensus 30 ~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 30 AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDP------AAVRRLFATAEEAF 103 (267)
T ss_dssp EEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH------HHHHHHHHHHHHHc
Confidence 348999999999999999874322 112222222223346789999999998 77776654
Q ss_pred -CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 73 -DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 73 -~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.+|++||+||.... . +.++..+++|+.|+.++++.+.. +..-.++|++||..+.... |
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--- 170 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH----------P--- 170 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC----------T---
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC----------C---
Confidence 78999999997532 1 23557888999999999988764 2222489999997653210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+..+.+.+..+ .++.+..+.|+.|..+..... .
T Consensus 171 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------~-- 217 (267)
T 3u5t_A 171 -------------------------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG------K-- 217 (267)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC----------------
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc------C--
Confidence 01369999999999887654 589999999998876532110 0
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.......+... .....+..++|+|++++.++...
T Consensus 218 ~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~ 251 (267)
T 3u5t_A 218 SDEVRDRFAKL---------APLERLGTPQDIAGAVAFLAGPD 251 (267)
T ss_dssp ---CHHHHHTS---------STTCSCBCHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcc
Confidence 00111111111 12235778999999998877543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.6e-07 Score=99.60 Aligned_cols=115 Identities=9% Similarity=0.020 Sum_probs=84.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch----------------hcHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD----------------EHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~----------------~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.++.++.+|++++ ++++.+++++|+|||+||..... +.....+++|+.|+.+++++|+
T Consensus 48 ~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 121 (253)
T 1xq6_A 48 GEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 121 (253)
T ss_dssp CCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH
T ss_pred CCeeEEEecCCCH------HHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH
Confidence 3567889999974 57888889999999999965321 1112357899999999999999
Q ss_pred hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 613 EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 613 ~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
+. ++++|||+||..++... .|..++ + ...|..||+.+|.++..
T Consensus 122 ~~-~~~~iv~~SS~~~~~~~---------~~~~~~----------------------~--~~~y~~sK~~~e~~~~~--- 164 (253)
T 1xq6_A 122 VA-GVKHIVVVGSMGGTNPD---------HPLNKL----------------------G--NGNILVWKRKAEQYLAD--- 164 (253)
T ss_dssp HH-TCSEEEEEEETTTTCTT---------CGGGGG----------------------G--GCCHHHHHHHHHHHHHT---
T ss_pred Hc-CCCEEEEEcCccCCCCC---------Cccccc----------------------c--chhHHHHHHHHHHHHHh---
Confidence 87 68899999998754210 110000 0 02499999999999832
Q ss_pred cccccccccCCCceeEeccCccc
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.++++.++||..+-
T Consensus 165 ---------~~i~~~~vrpg~v~ 178 (253)
T 1xq6_A 165 ---------SGTPYTIIRAGGLL 178 (253)
T ss_dssp ---------SSSCEEEEEECEEE
T ss_pred ---------CCCceEEEecceee
Confidence 47899999998874
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.45 E-value=8.3e-07 Score=107.56 Aligned_cols=190 Identities=20% Similarity=0.197 Sum_probs=129.9
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcChhH------------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADDAF------------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED 73 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~vf------------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~ 73 (1217)
|..-+||+.+.-|..+.++|.+.....+. +.+.++....-.++.++.+|++++ ++++.++++
T Consensus 260 ~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~------~~v~~~~~~ 333 (511)
T 2z5l_A 260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAER------DALAALVTA 333 (511)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCH------HHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCH------HHHHHHHhc
Confidence 44558899988899998888763322111 111111112234688999999998 888888765
Q ss_pred --ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccc-ccccccccccccCCCCCh
Q psy13944 74 --VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 --VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~dp 143 (1217)
+|+|||+||..... +.++..+++|+.|+.+|.+++..+.++.+||++||... +|...
T Consensus 334 ~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g------------- 400 (511)
T 2z5l_A 334 YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG------------- 400 (511)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT-------------
T ss_pred CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC-------------
Confidence 99999999986432 23457889999999999999987547789999999743 33210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
...|+.+|+..|.+.+... .++++++++|+.+.+. + ..... . ...
T Consensus 401 --------------------------~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~t---g---m~~~~-~-~~~ 446 (511)
T 2z5l_A 401 --------------------------QGAYAAANAALDALAERRRAAGLPATSVAWGLWGGG---G---MAAGA-G-EES 446 (511)
T ss_dssp --------------------------BHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCST---T---CCCCH-H-HHH
T ss_pred --------------------------CHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCC---c---ccccc-c-HHH
Confidence 1369999999999998766 7999999999877322 1 11111 0 011
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
+. ..| ...++.++++++++.++....
T Consensus 447 ~~--~~g------------~~~l~~e~~a~~l~~al~~~~ 472 (511)
T 2z5l_A 447 LS--RRG------------LRAMDPDAAVDALLGAMGRND 472 (511)
T ss_dssp HH--HHT------------BCCBCHHHHHHHHHHHHHHTC
T ss_pred HH--hcC------------CCCCCHHHHHHHHHHHHhCCC
Confidence 11 111 236899999999998886543
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.45 E-value=2e-07 Score=103.45 Aligned_cols=194 Identities=12% Similarity=0.121 Sum_probs=122.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-h-------HHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-A-------FDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-v-------fd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|..+.++|.+..... + .+.+.++... ...++.++.+|++++ ++++.+++
T Consensus 35 vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 35 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE------EDILSMFSAIRSQ 108 (279)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH------HHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH------HHHHHHHHHHHHh
Confidence 3478999889999999998732210 0 1111111111 124688999999998 77766654
Q ss_pred --CccEEEEcCccCCcc-------cCHHHHHHHHHHH----HHHHHHHhHhcCCC--CeEEEEcCccccccccccccccc
Q psy13944 73 --DVNIVFHVAATVKFD-------EHFQTAFEINCKG----TEKLLKMAEEMKNL--DSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 --~VDiViH~AA~v~f~-------e~l~~a~~vNV~G----T~~LLelAk~~~~l--k~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
++|+|||+||..... +.++..+++|+.| ++.++..+++. +. .++|++||..++...
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g~iv~isS~~~~~~~-------- 179 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDGHIININSMSGHRVL-------- 179 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSCEEEEECCGGGTSCC--------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCceEEEEcChhhcccC--------
Confidence 789999999975321 2355789999999 77777777763 43 699999998764310
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
+.+ ....|+.||+..|.+++.++ .++++.+++|+.|.++....
T Consensus 180 ~~~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~-- 229 (279)
T 1xg5_A 180 PLS----------------------------VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK-- 229 (279)
T ss_dssp SCG----------------------------GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH--
T ss_pred CCC----------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh--
Confidence 000 01369999999888776542 47999999999887753100
Q ss_pred ccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 211 GWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.... .+.. +.... ....++.++|+|++++.++..+.
T Consensus 230 -~~~~--~~~~-~~~~~------------~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 230 -LHDK--DPEK-AAATY------------EQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp -HTTT--CHHH-HHHHH------------C---CBCHHHHHHHHHHHHHSCT
T ss_pred -hccc--ChhH-Hhhhc------------ccccCCCHHHHHHHHHHHhcCCc
Confidence 0000 0011 11100 01236889999999998886543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.45 E-value=4.1e-07 Score=97.97 Aligned_cols=184 Identities=15% Similarity=0.125 Sum_probs=120.4
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc----cEEEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDV----NIVFH 79 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V----DiViH 79 (1217)
-+||+.+.-|....++|.+..... --+.+.+...+...++.++.+|++++ ++++.+++.+ |+|||
T Consensus 5 lVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 5 VITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH------QEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH------HHHHHHHHSCSSCCSEEEE
T ss_pred EEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH------HHHHHHHHHHhhcCCEEEE
Confidence 368888888899999988743321 11222222223346788999999998 7887776654 89999
Q ss_pred cCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 80 VAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 80 ~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
+||.... . +.++..+++|+.|+.++++.+... ++-.++|++||...+... +
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~----------~---------- 138 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK----------A---------- 138 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC----------T----------
T ss_pred eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC----------C----------
Confidence 9997532 1 234578999999999999987652 112289999997654221 0
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|..+.....
T Consensus 139 ------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------------- 184 (230)
T 3guy_A 139 ------------------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETS---------------- 184 (230)
T ss_dssp ------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------
T ss_pred ------------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhc----------------
Confidence 01369999999998887654 579999999998766532110
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.. ......+..++|+|++++.++..+.
T Consensus 185 -~~---------~~~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 185 -GK---------SLDTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp ------------------CCCHHHHHHHHHHHCCEET
T ss_pred -CC---------CCCcccCCCHHHHHHHHHHHHhCcC
Confidence 00 0112357899999999988775433
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=5.2e-07 Score=103.96 Aligned_cols=63 Identities=16% Similarity=0.236 Sum_probs=51.6
Q ss_pred CcEEEEEcc-cCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEccc
Q psy13944 549 ERIVVLTAD-LQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKN-LDSFIYVSTA 626 (1217)
Q Consensus 549 ~kV~~V~GD-ltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~-lk~fV~vSTa 626 (1217)
.+++++.|| ++++ +++..+++++|+|||+|+.... ..|+.| ++++++|++. + +++|||+||.
T Consensus 51 ~~v~~v~~D~l~d~------~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~ 114 (352)
T 1xgk_A 51 PNVTLFQGPLLNNV------PLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMP 114 (352)
T ss_dssp TTEEEEESCCTTCH------HHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECC
T ss_pred CCcEEEECCccCCH------HHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCc
Confidence 368899999 9874 4688888999999999985421 347777 9999999987 6 8999999997
Q ss_pred e
Q psy13944 627 Y 627 (1217)
Q Consensus 627 ~ 627 (1217)
+
T Consensus 115 ~ 115 (352)
T 1xgk_A 115 D 115 (352)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.44 E-value=1.9e-07 Score=102.13 Aligned_cols=189 Identities=14% Similarity=0.042 Sum_probs=118.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVKF 86 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~f 86 (1217)
.-+||+.+.-|....++|.+..... +.++-.+...+ ..++.++ +|+ .. +.+.+...+.++|+|||+||....
T Consensus 22 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~-~D~-~~----~~~~~~~~~~~iD~lv~~Ag~~~~ 94 (249)
T 1o5i_A 22 VLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-SGHRYVV-CDL-RK----DLDLLFEKVKEVDILVLNAGGPKA 94 (249)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-TCSEEEE-CCT-TT----CHHHHHHHSCCCSEEEECCCCCCC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh-hCCeEEE-eeH-HH----HHHHHHHHhcCCCEEEECCCCCCC
Confidence 4489999999999999998743221 11110000011 1357777 999 22 123333334589999999997532
Q ss_pred ---c----cCHHHHHHHHHHHHHHHHHH----hHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCc
Q psy13944 87 ---D----EHFQTAFEINCKGTEKLLKM----AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 87 ---~----e~l~~a~~vNV~GT~~LLel----Ak~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
. +.++..+++|+.|+.++.+. +++ .+..++|++||..++....
T Consensus 95 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~------------------------- 148 (249)
T 1o5i_A 95 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE-KGWGRIVAITSFSVISPIE------------------------- 148 (249)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEECCGGGTSCCT-------------------------
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEEEEEcchHhcCCCC-------------------------
Confidence 1 23557889999998776554 444 2457999999987653210
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHH-HHhcC
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV-AVGLG 229 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~-~~~~G 229 (1217)
....|+.||+..|.+.+..+ .++.+.++||+.|.++.... +.. .... .+...
T Consensus 149 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~------~~~~~~~~~~ 206 (249)
T 1o5i_A 149 -------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE---LLS------EEKKKQVESQ 206 (249)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---HSC------HHHHHHHHTT
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc---cch------hhHHHHHHhc
Confidence 01369999999998876653 58999999999998874211 000 1111 11111
Q ss_pred ceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 230 IMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 230 ~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.....+++++|+|++++.++..
T Consensus 207 ---------~p~~~~~~~~dvA~~i~~l~s~ 228 (249)
T 1o5i_A 207 ---------IPMRRMAKPEEIASVVAFLCSE 228 (249)
T ss_dssp ---------STTSSCBCHHHHHHHHHHHHSG
T ss_pred ---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 1123578999999999887754
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=2.4e-07 Score=103.00 Aligned_cols=195 Identities=14% Similarity=0.122 Sum_probs=126.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-h----HHHhh---hc-CcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-A----FDRLR---KE-NANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-v----fd~Lr---~~-~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+.-|....++|.+..... + -+.+. ++ ....-.++.++.+|++++ ++++.+++
T Consensus 31 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 31 FITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP------PAVMAAVDQALKEFG 104 (277)
T ss_dssp EEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 478998888999999987632211 0 11111 11 011245789999999998 77776654
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|++||....... +
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 172 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ----------A-- 172 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC----------T--
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC----------C--
Confidence 78999999996432 1235678999999999999987431 133589999997653211 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|.++... ....
T Consensus 173 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~------~~~~ 220 (277)
T 4fc7_A 173 --------------------------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGL------RRLG 220 (277)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHH------HHHS
T ss_pred --------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhh------hhcc
Confidence 01369999999998887654 5899999999999875210 0001
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
............ .....+...+|++++++.++....
T Consensus 221 ~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~fL~s~~~ 256 (277)
T 4fc7_A 221 GPQASLSTKVTA---------SPLQRLGNKTEIAHSVLYLASPLA 256 (277)
T ss_dssp CCHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred CCHHHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCCcc
Confidence 111222222221 112346789999999998876433
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.8e-07 Score=102.19 Aligned_cols=197 Identities=15% Similarity=0.121 Sum_probs=127.1
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.|+ .-+||+.+.-|....++|.+.... .--+.+.+...+...++.++.+|++++ ++++.+++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDP------GSVKALFAEIQALT 78 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCH------HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCH------HHHHHHHHHHHHHC
Confidence 344 347899888899999999874322 111222222122345789999999998 77777665
Q ss_pred -CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHh----HhcCCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 -DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMA----EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelA----k~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+||..... +.++..+++|+.|+.++++++ ++.+...++|++||....... |
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 148 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT----------P 148 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC----------T
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC----------C
Confidence 789999999975321 235578999999999998874 332335699999997653211 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|..+.....+ ..
T Consensus 149 ----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~ 197 (247)
T 3rwb_A 149 ----------------------------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASP---HN 197 (247)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG---GG
T ss_pred ----------------------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC---hh
Confidence 01369999988888776554 5899999999988775322111 00
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
....+... .. ....+...+|++++++.++....
T Consensus 198 --~~~~~~~~-~~-----------~~~r~~~pedva~~v~~L~s~~~ 230 (247)
T 3rwb_A 198 --EAFGFVEM-LQ-----------AMKGKGQPEHIADVVSFLASDDA 230 (247)
T ss_dssp --GGHHHHHH-HS-----------SSCSCBCHHHHHHHHHHHHSGGG
T ss_pred --HHHHHHhc-cc-----------ccCCCcCHHHHHHHHHHHhCccc
Confidence 00111111 00 11235678999999988776543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.43 E-value=9.2e-07 Score=96.31 Aligned_cols=194 Identities=14% Similarity=0.026 Sum_probs=126.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|+++. ++.+.+++
T Consensus 10 vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 10 ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESL------HGVEALYSSLDNEL 83 (255)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSH------HHHHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCH------HHHHHHHHHHHHHh
Confidence 3478988888999999998732211 11112222222345788999999987 66665543
Q ss_pred -------CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccccccccc
Q psy13944 73 -------DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 -------~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|++||+||.... . +.++..+++|+.|+.++++.+... .+-.++|++||.......
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------- 155 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-------- 155 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC--------
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC--------
Confidence 38999999997532 1 224578899999999999998652 223489999997653321
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
| ....|+.||+..+.+.+..+ .++.+..++|+.|..+.......
T Consensus 156 --~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~- 204 (255)
T 3icc_A 156 --P----------------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS- 204 (255)
T ss_dssp --T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT-
T ss_pred --C----------------------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc-
Confidence 0 01369999999998886654 58999999999998775433211
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
........... .....+..++|++++++.++...
T Consensus 205 ------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~ 238 (255)
T 3icc_A 205 ------DPMMKQYATTI---------SAFNRLGEVEDIADTAAFLASPD 238 (255)
T ss_dssp ------SHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGG
T ss_pred ------cHHHHHhhhcc---------CCcCCCCCHHHHHHHHHHHhCcc
Confidence 11111111111 12245778999999988777543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=6.4e-07 Score=98.03 Aligned_cols=150 Identities=14% Similarity=0.136 Sum_probs=105.9
Q ss_pred ccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEE
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIV 77 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiV 77 (1217)
+||+.+.-|....++|.+.....+ -+.+.+...+...++.++.+|++++ ++++.+++ ++|++
T Consensus 5 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 5 VTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNR------AAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp ETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH------HHHHHHHHTSCTTTCCCCEE
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEE
Confidence 688888999999999987422111 1112111111225789999999998 77776654 68999
Q ss_pred EEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 78 FHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 78 iH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
||+||... +. +.++..+++|+.|+.++++.+... .+..++|++||....... +
T Consensus 79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~------ 142 (248)
T 3asu_A 79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY----------A------ 142 (248)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------T------
T ss_pred EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC----------C------
Confidence 99999752 21 235578999999999998887521 245799999997653210 0
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
....|+.||+..|.+.+..+ .++.+..++|+.|.|
T Consensus 143 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 143 ----------------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred ----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 01369999999999887653 589999999999985
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.40 E-value=6.2e-07 Score=98.38 Aligned_cols=193 Identities=11% Similarity=0.038 Sum_probs=118.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------~ 73 (1217)
.-+||+.+.-|....++|.+.... .-.+.+.++......++.++.+|++++ ++++.+++ .
T Consensus 10 vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 10 VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNE------DEVTAFLNAADAHAP 83 (252)
T ss_dssp EEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHHHHHHSC
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCH------HHHHHHHHHHHhhCC
Confidence 448999999999999999874321 111122222122235789999999998 77777665 6
Q ss_pred ccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|++||+||.... .+.++..+++|+.|+..+++++... .+-.++|++||....... +
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--- 150 (252)
T 3h7a_A 84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG----------S--- 150 (252)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC----------T---
T ss_pred ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC----------C---
Confidence 7999999997532 1235578999999999998887431 234589999997653210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCE-EEEecceeccCCCCCCcccccccc
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPL-GIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPv-vIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ .++.+ .++.|+.|..+......
T Consensus 151 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~------- 198 (252)
T 3h7a_A 151 -------------------------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR------- 198 (252)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------
T ss_pred -------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc-------
Confidence 01369999999998887654 57888 78999888665322110
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
...... ........ ++..+|+|++++.++..+..
T Consensus 199 --~~~~~~---------~~~~~~~~-~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 199 --EQMFGK---------DALANPDL-LMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred --hhhhhh---------hhhcCCcc-CCCHHHHHHHHHHHHhCchh
Confidence 000000 00111223 88999999999988875444
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=5.8e-07 Score=108.31 Aligned_cols=188 Identities=19% Similarity=0.152 Sum_probs=127.5
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcChhH------------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADDAF------------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED 73 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~vf------------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~ 73 (1217)
|..-+||+.+.-|....++|.+.....+. +.+.++....-.++.++.+|++++ +++..++++
T Consensus 227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~------~~v~~~~~~ 300 (486)
T 2fr1_A 227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDR------ESVRELLGG 300 (486)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCH------HHHHHHHHH
Confidence 44558899998999999988874332111 111111111234688999999998 888877765
Q ss_pred c------cEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccc-ccccccccccccCC
Q psy13944 74 V------NIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS-NCNIKKIEEKFYEP 139 (1217)
Q Consensus 74 V------DiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v-~g~~~~I~E~~y~~ 139 (1217)
+ |+|||+|+.... .+.+...+++|+.|+.+|++++++. ++.+||++||... +|...
T Consensus 301 i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~~g--------- 370 (486)
T 2fr1_A 301 IGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPG--------- 370 (486)
T ss_dssp SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTT---------
T ss_pred HHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhcCCCCC---------
Confidence 4 999999997642 1234577889999999999999885 7899999999654 22110
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
-..|+.+|+..+.+..+.. .|+++++++|+.+.++... ...
T Consensus 371 ------------------------------~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~------~~~-- 412 (486)
T 2fr1_A 371 ------------------------------LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMA------EGP-- 412 (486)
T ss_dssp ------------------------------CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----------------
T ss_pred ------------------------------CHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCccc------chh--
Confidence 1359999999999887766 8999999999987664210 000
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
... .+ .......++.+++++++..++...
T Consensus 413 --------~~~---~~---~~~g~~~i~~e~~a~~l~~~l~~~ 441 (486)
T 2fr1_A 413 --------VAD---RF---RRHGVIEMPPETACRALQNALDRA 441 (486)
T ss_dssp ---------------C---TTTTEECBCHHHHHHHHHHHHHTT
T ss_pred --------HHH---HH---HhcCCCCCCHHHHHHHHHHHHhCC
Confidence 000 00 012245799999999999887643
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.39 E-value=2.4e-06 Score=97.66 Aligned_cols=195 Identities=15% Similarity=0.038 Sum_probs=123.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCc-ccCCCeEEEEccCCCCC-----------CCCCHHH
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENA-NFTERIVVLTADLQSDG-----------LGLDEKE 66 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p-~~~~kI~~V~GDl~d~~-----------LGLs~ed 66 (1217)
.-+||+.+.-|..+.++|.+..... -.+.+.++.. ..-.++.++.+|++++. .+-+.++
T Consensus 49 ~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 128 (328)
T 2qhx_A 49 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTR 128 (328)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHH
Confidence 3478998888999999998732110 0111111111 12357899999999982 0000005
Q ss_pred HHHhcC-------CccEEEEcCccCCc---------------------ccCHHHHHHHHHHHHHHHHHHhHhc---CC--
Q psy13944 67 KKVLRE-------DVNIVFHVAATVKF---------------------DEHFQTAFEINCKGTEKLLKMAEEM---KN-- 113 (1217)
Q Consensus 67 l~~L~~-------~VDiViH~AA~v~f---------------------~e~l~~a~~vNV~GT~~LLelAk~~---~~-- 113 (1217)
++.+++ .+|+|||+||.... .+.++..+++|+.|+..+++++... .+
T Consensus 129 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~ 208 (328)
T 2qhx_A 129 CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK 208 (328)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGG
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 555543 78999999997532 2234468899999999999887632 12
Q ss_pred ----CCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-
Q psy13944 114 ----LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM- 188 (1217)
Q Consensus 114 ----lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~- 188 (1217)
..++|++||...+... + ....|+.||+..+.+.+..+
T Consensus 209 ~~~~~g~IV~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~ 250 (328)
T 2qhx_A 209 HRGTNYSIINMVDAMTNQPL----------L----------------------------GYTIYTMAKGALEGLTRSAAL 250 (328)
T ss_dssp GSCSCEEEEEECCTTTTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECchhhccCC----------C----------------------------CcHHHHHHHHHHHHHHHHHHH
Confidence 4689999998653210 0 01369999999998887654
Q ss_pred ----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee-ccccHHHHHHHHHHHHHh
Q psy13944 189 ----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV-DMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 189 ----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~-D~VpVDdVvnAii~aa~~ 260 (1217)
.++.+.+++|+.|..+. .. . + .....+.... + .. -+...+|+|++++.++..
T Consensus 251 el~~~gIrvn~v~PG~v~T~~-~~-------~--~-~~~~~~~~~~----p-----~~~r~~~pedvA~~v~~l~s~ 307 (328)
T 2qhx_A 251 ELAPLQIRVNGVGPGLSVLVD-DM-------P--P-AVWEGHRSKV----P-----LYQRDSSAAEVSDVVIFLCSS 307 (328)
T ss_dssp HHGGGTEEEEEEEESSBSCCC-CS-------C--H-HHHHHHHTTC----T-----TTTSCBCHHHHHHHHHHHHSG
T ss_pred HHhhcCcEEEEEecCcccCCc-cc-------c--H-HHHHHHHhhC----C-----CCCCCCCHHHHHHHHHHHhCc
Confidence 58999999999998765 21 1 1 1112222211 1 11 367899999999988754
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.1e-06 Score=98.57 Aligned_cols=194 Identities=15% Similarity=0.137 Sum_probs=124.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhc---C--------hhHHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA---D--------DAFDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~---~--------~vfd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
.-+||+.+.-|....++|.+... . .-.+.+.++... ...++.++.+|++++ ++++.+++
T Consensus 36 ~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~ 109 (287)
T 3rku_A 36 VLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQA------EKIKPFIENL 109 (287)
T ss_dssp EEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCG------GGHHHHHHTS
T ss_pred EEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH------HHHHHHHHHH
Confidence 34789998899999999876432 1 111122211111 134688999999998 77766654
Q ss_pred -----CccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccc
Q psy13944 73 -----DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 73 -----~VDiViH~AA~v~----f----~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
.+|++||+||... + .+.++..+++|+.|+.++++++... .+..++|++||.......
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~------- 182 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY------- 182 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-------
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC-------
Confidence 5799999999753 1 1235688999999999999988421 245699999997653210
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
+ ....|+.||+..+.+.+..+ .++.+..++|+.|..+....
T Consensus 183 ---~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~--- 228 (287)
T 3rku_A 183 ---P----------------------------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLV--- 228 (287)
T ss_dssp ---T----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHH---
T ss_pred ---C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccc---
Confidence 0 01369999999998887654 68999999999887753100
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
...+............ ..+..+|||++++.++.....
T Consensus 229 ---~~~~~~~~~~~~~~~~------------~p~~pedvA~~v~~l~s~~~~ 265 (287)
T 3rku_A 229 ---RYRGNEEQAKNVYKDT------------TPLMADDVADLIVYATSRKQN 265 (287)
T ss_dssp ---HTTTCHHHHHHHHTTS------------CCEEHHHHHHHHHHHHTSCTT
T ss_pred ---cccCcHHHHHHhhccc------------CCCCHHHHHHHHHHHhCCCCC
Confidence 0000011111111111 123789999999988865443
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.38 E-value=3.7e-07 Score=100.92 Aligned_cols=204 Identities=12% Similarity=0.080 Sum_probs=124.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh------------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD------------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~------------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
.-+||+.+.-|....++|.+..... ..+.+++..+ ..++.++.+|++++ ++++.+++
T Consensus 13 ~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~------~~~~~~~~~~g 84 (267)
T 3t4x_A 13 ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP--DAILQPVVADLGTE------QGCQDVIEKYP 84 (267)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT--TCEEEEEECCTTSH------HHHHHHHHHCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC--CceEEEEecCCCCH------HHHHHHHHhcC
Confidence 4488999888999999998743211 1111222111 24678899999997 66666554
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|++||...+... +
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 152 (267)
T 3t4x_A 85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS----------Q-- 152 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC----------T--
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC----------C--
Confidence 78999999997532 1234567999999988877765431 344699999997654211 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc-cccc-
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM-WVKG- 215 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG-Widn- 215 (1217)
....|+.||+..+.+.+.++ .++.+..+.|+.|..+....... ....
T Consensus 153 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~ 206 (267)
T 3t4x_A 153 --------------------------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNE 206 (267)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTS
T ss_pred --------------------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCccc
Confidence 01369999999999887654 46888999999887652110000 0000
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
...+............ .......+..++|+|++++.++....
T Consensus 207 ~~~~~~~~~~~~~~~~-----~~~~~~r~~~pedvA~~v~fL~s~~~ 248 (267)
T 3t4x_A 207 QLTIEEAEKRFMKENR-----PTSIIQRLIRPEEIAHLVTFLSSPLS 248 (267)
T ss_dssp CCCHHHHHHHHHHHHC-----TTCSSCSCBCTHHHHHHHHHHHSGGG
T ss_pred CCCHHHHHHHHhhccC-----CcccccCccCHHHHHHHHHHHcCccc
Confidence 0000111111111100 01123468899999999988776433
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=6.4e-07 Score=97.23 Aligned_cols=183 Identities=15% Similarity=0.105 Sum_probs=119.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... --+.+.+.......++.++.+|++++ ++++.+++ .+|
T Consensus 6 vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 6 IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHH------EDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSH------HHHHHHHHHHHHHHCSCS
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCH------HHHHHHHHHHHHhcCCCc
Confidence 3478888888999999998743211 11122211111123689999999998 77776654 679
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
++||+||.... .+.++..+++|+.|+..+++++... .+-.++|++||....... +
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~----------~------ 143 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK----------A------ 143 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC----------S------
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC----------C------
Confidence 99999997532 1235578999999999999888532 111289999997543210 0
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|-.+.... ..
T Consensus 144 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-------~~---- 190 (235)
T 3l6e_A 144 ----------------------NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN-------TD---- 190 (235)
T ss_dssp ----------------------SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------
T ss_pred ----------------------CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc-------cC----
Confidence 00369999999998887654 57889999999886653211 00
Q ss_pred HHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 222 MYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 222 li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
. .....+...+|+|++++.++..+
T Consensus 191 ------~----------~~~~~~~~pedvA~~v~~l~~~~ 214 (235)
T 3l6e_A 191 ------H----------VDPSGFMTPEDAAAYMLDALEAR 214 (235)
T ss_dssp ----------------------CBCHHHHHHHHHHHTCCC
T ss_pred ------C----------CCCcCCCCHHHHHHHHHHHHhCC
Confidence 0 00114789999999999887643
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.35 E-value=5.4e-07 Score=97.72 Aligned_cols=196 Identities=13% Similarity=0.053 Sum_probs=121.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hHH----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AFD----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAA 82 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vfd----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA 82 (1217)
.-+||+.+.-|....++|.+..... +.+ .+.++ . .+.++.+|+++..+.--.+.......++|++||+||
T Consensus 5 vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag 79 (239)
T 2ekp_A 5 ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQS---L--GAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAA 79 (239)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH---H--TCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh---h--CcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3478999889999999998743221 111 11111 1 278899999983110000111122357999999999
Q ss_pred cCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhc
Q psy13944 83 TVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 83 ~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
.... .+.++..+++|+.|+.++++.+... .+..++|++||..++.... .+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------~~------------ 139 (239)
T 2ekp_A 80 VNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--------PV------------ 139 (239)
T ss_dssp CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------TS------------
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--------CC------------
Confidence 7532 1235578999999999999887431 2457999999987654210 00
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
....|+.||+..|.+.+.++ .++++.++||+.|.++..... .........+.
T Consensus 140 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~ 196 (239)
T 2ekp_A 140 ----------------PIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-------RQNPELYEPIT 196 (239)
T ss_dssp ----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTCHHHHHHHH
T ss_pred ----------------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-------ccCHHHHHHHH
Confidence 01369999999998887654 489999999999887642110 00011111111
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.. .....+...+|+|++++.++..
T Consensus 197 ~~---------~p~~~~~~~~dvA~~~~~l~s~ 220 (239)
T 2ekp_A 197 AR---------IPMGRWARPEEIARVAAVLCGD 220 (239)
T ss_dssp TT---------CTTSSCBCHHHHHHHHHHHTSG
T ss_pred hc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence 11 1112478999999999877654
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.33 E-value=3.9e-07 Score=99.11 Aligned_cols=192 Identities=13% Similarity=0.075 Sum_probs=108.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVA 81 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~A 81 (1217)
.-+||+.+.-|....++|.+ ...+. +.+.+.. ...++.++.+|++++..--...+...-..++|+|||+|
T Consensus 8 vlITGas~gIG~~~a~~l~~--g~~v~~~~r~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~A 83 (245)
T 3e9n_A 8 AVVTGATGGMGIEIVKDLSR--DHIVYALGRNPEHLAALA--EIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAA 83 (245)
T ss_dssp EEEESTTSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHH--TSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC
T ss_pred EEEEcCCCHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHH--hhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34789998889999999866 22111 1111111 14578999999987510000000011124689999999
Q ss_pred ccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhc
Q psy13944 82 ATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 82 A~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
|..... +.++..+++|+.|+.++++.+... ++-.++|++||...+....
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------- 141 (245)
T 3e9n_A 84 AVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP---------------------- 141 (245)
T ss_dssp ----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-------------------------------
T ss_pred CcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC----------------------
Confidence 975321 234578899999988888876431 1115899999986643210
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
....|+.||+..|.+.+.++ .++.+.+++|+.|.++...... + ...
T Consensus 142 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~----------~~~ 192 (245)
T 3e9n_A 142 ----------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM---D----------SQG 192 (245)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh---h----------hhh
Confidence 01369999999999887654 5799999999998886432110 0 000
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
.......++.++|+|++++.++.....
T Consensus 193 ---------~~~~~~~~~~p~dvA~~i~~l~~~~~~ 219 (245)
T 3e9n_A 193 ---------TNFRPEIYIEPKEIANAIRFVIDAGET 219 (245)
T ss_dssp ------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred ---------cccccccCCCHHHHHHHHHHHHcCCCc
Confidence 001123478999999999988865443
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.32 E-value=2.7e-06 Score=93.46 Aligned_cols=192 Identities=10% Similarity=0.052 Sum_probs=123.3
Q ss_pred cccCCC--CCCcccHHHHHHHHhcCh---------h-HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 9 GHNGAK--TCKHNSILWVAKDFFADD---------A-FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 9 g~tg~r--~kkg~~~~eRL~~~l~~~---------v-fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
=+||+. +.-|....++|.+..... . -+.+.+.......++.++.+|++++ ++++.+++
T Consensus 24 lITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~ 97 (267)
T 3gdg_A 24 VVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSY------ESCEKLVKDVVA 97 (267)
T ss_dssp EETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCH------HHHHHHHHHHHH
T ss_pred EEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCH------HHHHHHHHHHHH
Confidence 378888 778888888888742211 0 1111111112246789999999998 77766654
Q ss_pred ---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 ---DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ---~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|+|||+||..... +.++..+++|+.|+.++++++... .+..++|++||........ ++
T Consensus 98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~~ 170 (267)
T 3gdg_A 98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF-------PQ 170 (267)
T ss_dssp HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS-------SS
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC-------CC
Confidence 569999999975321 234578999999999999988321 2346999999976532100 00
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
.-..|+.||+..+.+.+.++ +.+.+..+.|+.|-.+.....
T Consensus 171 -----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~------ 215 (267)
T 3gdg_A 171 -----------------------------EQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV------ 215 (267)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS------
T ss_pred -----------------------------CCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC------
Confidence 01369999999999887655 347788899988866532211
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+......+... .....+..++|++++++.++..
T Consensus 216 ---~~~~~~~~~~~---------~~~~r~~~~~dva~~~~~l~s~ 248 (267)
T 3gdg_A 216 ---PKETQQLWHSM---------IPMGRDGLAKELKGAYVYFASD 248 (267)
T ss_dssp ---CHHHHHHHHTT---------STTSSCEETHHHHHHHHHHHST
T ss_pred ---CHHHHHHHHhc---------CCCCCCcCHHHHHhHhheeecC
Confidence 11122222221 2234577899999999887754
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.9e-06 Score=95.53 Aligned_cols=193 Identities=9% Similarity=0.061 Sum_probs=121.4
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++++.+++
T Consensus 7 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 7 ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR------HSVAAFAQAAVDTWG 80 (264)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 3478999888999999998743211 11122222222245688999999998 77776654
Q ss_pred CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|++||+||..... +.++..+++|+.|+..+++.+... .+..++|++||...+... +
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----------~-- 148 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV----------P-- 148 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------T--
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC----------C--
Confidence 789999999975321 235578999999999888877431 234689999997654221 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||+..+.+.+..+ +++.+..++|+.|..+...... ..
T Consensus 149 --------------------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~-------~~ 195 (264)
T 3tfo_A 149 --------------------------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTIT-------HE 195 (264)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------
T ss_pred --------------------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccccc-------ch
Confidence 01369999999998887655 5888999999988765322110 00
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
... .... ....-....+|+|++++.++.....
T Consensus 196 -~~~-----~~~~------~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 196 -ETM-----AAMD------TYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp ------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred -hHH-----HHHH------hhhccCCCHHHHHHHHHHHhcCCcc
Confidence 000 0000 0011146899999999998876544
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.30 E-value=3.8e-07 Score=100.69 Aligned_cols=192 Identities=14% Similarity=0.093 Sum_probs=118.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-----------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-----------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-----------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++....-.++.++.+|++++ ++++.+++
T Consensus 14 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~ 87 (262)
T 3ksu_A 14 IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNE------EEVAKLFDFAEK 87 (262)
T ss_dssp EEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSH------HHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHH
Confidence 3478888888888888887632211 11112222222245789999999998 77777664
Q ss_pred ---CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 ---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ---~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+||.... .+.++..+++|+.|+..+++.+... .+-.++|++||........
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------- 156 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG----------- 156 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC-----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC-----------
Confidence 68999999997532 1234578899999999999998752 2335899999976543210
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+..+.+.+..+ .++.+..+.|+.|..+.... .
T Consensus 157 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-------~ 202 (262)
T 3ksu_A 157 ---------------------------FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYG-------Q 202 (262)
T ss_dssp ---------------------------CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHT-------C
T ss_pred ---------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-------c
Confidence 01359999999998887654 57999999999876542110 0
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.. .... ...........+...+|+|++++.++..
T Consensus 203 ~~-~~~~---------~~~~~~~~~~r~~~pedvA~~v~~L~s~ 236 (262)
T 3ksu_A 203 ET-KEST---------AFHKSQAMGNQLTKIEDIAPIIKFLTTD 236 (262)
T ss_dssp C----------------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred Cc-hHHH---------HHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence 00 0000 0011111223477889999999888765
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.5e-06 Score=95.12 Aligned_cols=179 Identities=12% Similarity=0.011 Sum_probs=121.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDiViH~ 80 (1217)
.-+||+.+.-|..+.++|.+.... +.-.-|.. .. ..-..+..|++++ ++++.+++ .+|+|||+
T Consensus 25 vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~--~~-~~~~~~~~d~~d~------~~v~~~~~~~~~~~g~iD~li~~ 94 (251)
T 3orf_A 25 ILVLGGSGALGAEVVKFFKSKSWN-TISIDFRE--NP-NADHSFTIKDSGE------EEIKSVIEKINSKSIKVDTFVCA 94 (251)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCE-EEEEESSC--CT-TSSEEEECSCSSH------HHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCc--cc-ccccceEEEeCCH------HHHHHHHHHHHHHcCCCCEEEEC
Confidence 458999999999999999875332 22111111 11 1224577888887 67666554 46999999
Q ss_pred CccCCc--------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhh
Q psy13944 81 AATVKF--------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 81 AA~v~f--------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~ 151 (1217)
||.... .+.++..+++|+.|+.++++++... ..-.++|++||..++... +
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~----------- 153 (251)
T 3orf_A 95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT----------S----------- 153 (251)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------T-----------
T ss_pred CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC----------C-----------
Confidence 996421 1234578899999999999998753 122389999998654211 0
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
....|+.||+..|.+++.++ .++.+.+++|+.|.++.. .
T Consensus 154 -----------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-----------------~ 199 (251)
T 3orf_A 154 -----------------GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-----------------R 199 (251)
T ss_dssp -----------------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-----------------H
T ss_pred -----------------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-----------------h
Confidence 01369999999999998754 368899999987765421 1
Q ss_pred HHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 225 AVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 225 ~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.... ......+++++|+|++++.++..
T Consensus 200 ~~~~---------~~~~~~~~~~~dva~~i~~l~~~ 226 (251)
T 3orf_A 200 KYMS---------DANFDDWTPLSEVAEKLFEWSTN 226 (251)
T ss_dssp HHCT---------TSCGGGSBCHHHHHHHHHHHHHC
T ss_pred hhcc---------cccccccCCHHHHHHHHHHHhcC
Confidence 1111 12345688999999999988876
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=1.3e-06 Score=94.34 Aligned_cols=182 Identities=13% Similarity=0.054 Sum_probs=120.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---------CccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---------DVNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---------~VDiVi 78 (1217)
.-+||+.+.-|....++|.+.... +.-.-|.. ........++.+|++++ ++++.+++ ++|+||
T Consensus 6 vlITGas~gIG~~~a~~l~~~G~~-V~~~~r~~-~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~g~id~lv 77 (236)
T 1ooe_A 6 VIVYGGKGALGSAILEFFKKNGYT-VLNIDLSA-NDQADSNILVDGNKNWT------EQEQSILEQTASSLQGSQVDGVF 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTEE-EEEEESSC-CTTSSEEEECCTTSCHH------HHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCcHHHHHHHHHHHHCCCE-EEEEecCc-cccccccEEEeCCCCCH------HHHHHHHHHHHHHhCCCCCCEEE
Confidence 347899988999999999875332 21111111 11223467788999987 66665553 789999
Q ss_pred EcCccCC---c-c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 79 HVAATVK---F-D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 79 H~AA~v~---f-~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
|+||... + . +.++..+++|+.|+.++++++... ..-.++|++||...+.. .+
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~--------- 138 (236)
T 1ooe_A 78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP----------TP--------- 138 (236)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC----------CT---------
T ss_pred ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC----------CC---------
Confidence 9999643 1 1 234578999999999999998652 11248999999765421 00
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
.-..|+.||+..|.+.+.++ .++.+.++||+.|.++...
T Consensus 139 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~--------------- 184 (236)
T 1ooe_A 139 -------------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR--------------- 184 (236)
T ss_dssp -------------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH---------------
T ss_pred -------------------CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh---------------
Confidence 01369999999999987764 2488999999988765210
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..... .....+++.+|+|++++..+...
T Consensus 185 --~~~~~---------~~~~~~~~~~dvA~~i~~~l~s~ 212 (236)
T 1ooe_A 185 --KWMPN---------ADHSSWTPLSFISEHLLKWTTET 212 (236)
T ss_dssp --HHSTT---------CCGGGCBCHHHHHHHHHHHHHCG
T ss_pred --hcCCC---------ccccccCCHHHHHHHHHHHHcCC
Confidence 00000 11234678999999998666443
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=9.1e-07 Score=96.12 Aligned_cols=119 Identities=13% Similarity=0.096 Sum_probs=85.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 133 (255)
T 1fmc_A 60 GQAFACRCDITSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46889999999853 5555554 79999999996542 2345578899999999999988521
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..+||++||..++... + ....|+.||+..|.+++++.
T Consensus 134 ~~~~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~~~- 174 (255)
T 1fmc_A 134 EKNGGGVILTITSMAAENKN----------I----------------------------NMTSYASSKAAASHLVRNMA- 174 (255)
T ss_dssp HHHTCEEEEEECCGGGTCCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred HhcCCcEEEEEcchhhcCCC----------C----------------------------CCcccHHHHHHHHHHHHHHH-
Confidence 246799999998654321 0 01259999999999997764
Q ss_pred cccccccccCCCceeEeccCccch
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
++--..++.+.+++|..|..
T Consensus 175 ----~~~~~~~i~v~~v~Pg~v~t 194 (255)
T 1fmc_A 175 ----FDLGEKNIRVNGIAPGAILT 194 (255)
T ss_dssp ----HHHHTTTEEEEEEEECSBCS
T ss_pred ----HHhhhcCcEEEEEecccCcc
Confidence 11123478888889988753
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.27 E-value=2e-06 Score=95.61 Aligned_cols=153 Identities=13% Similarity=0.060 Sum_probs=105.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED------ 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~------ 73 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++.... .++.++.+|++++ ++++.+++.
T Consensus 24 vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 24 LFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDR------AAMSAAVDNLPEEFA 96 (272)
T ss_dssp EEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCH------HHHHHHHHTCCGGGS
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCH------HHHHHHHHHHHHHhC
Confidence 3478999999999999998743211 111121111111 4789999999998 777776654
Q ss_pred -ccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCC-eEEEEcCcccccccccccccccCCC
Q psy13944 74 -VNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM---KNLD-SFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 74 -VDiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk-~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
+|+|||+||.... . +.++..+++|+.|+.++++.+... .+.. ++|++||...+.. .|
T Consensus 97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~----------~~ 166 (272)
T 2nwq_A 97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP----------YP 166 (272)
T ss_dssp SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC----------CT
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC----------CC
Confidence 5999999997532 1 235578999999988877776421 2345 9999999765321 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|.++.
T Consensus 167 ----------------------------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 167 ----------------------------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred ----------------------------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 01369999999999987754 57999999999887763
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-06 Score=96.62 Aligned_cols=204 Identities=8% Similarity=-0.016 Sum_probs=125.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-----HH---HhhhcCcc-c-CCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-----FD---RLRKENAN-F-TERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-----fd---~Lr~~~p~-~-~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
.-+||+.+.-|....++|.+.....+ -+ .+.++... . ..++.++.+|++++ ++.+.+++
T Consensus 11 ~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 11 AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA------LQVRAFAEACERT 84 (265)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH------HHHHHHHHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCH------HHHHHHHHHHHHH
Confidence 34789888889999999987432210 11 11111111 1 23589999999998 77666553
Q ss_pred --CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 --DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 --~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|++||....... +
T Consensus 85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 154 (265)
T 3lf2_A 85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE----------P 154 (265)
T ss_dssp HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC----------T
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC----------C
Confidence 67999999997532 1235578999999999999988542 234579999997653211 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc-
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK- 214 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid- 214 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|..+..........
T Consensus 155 ----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~ 206 (265)
T 3lf2_A 155 ----------------------------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREE 206 (265)
T ss_dssp ----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC---
T ss_pred ----------------------------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhh
Confidence 01369999999998886654 58999999999887753211000000
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.......+....... .......+...+|+|++++.++....
T Consensus 207 ~~~~~~~~~~~~~~~-------~~~p~~r~~~pedvA~~v~fL~s~~~ 247 (265)
T 3lf2_A 207 RELDWAQWTAQLARN-------KQIPLGRLGKPIEAARAILFLASPLS 247 (265)
T ss_dssp ---CHHHHHHHHHHH-------TTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred hccCHHHHHHHHhhc-------cCCCcCCCcCHHHHHHHHHHHhCchh
Confidence 000001111111110 00112347789999999998776433
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.26 E-value=5.8e-07 Score=100.12 Aligned_cols=184 Identities=10% Similarity=0.085 Sum_probs=119.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCccc-CCCeEEEEccCCCCCCCCCHHHHHHhcC------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANF-TERIVVLTADLQSDGLGLDEKEKKVLRE------ 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~-~~kI~~V~GDl~d~~LGLs~edl~~L~~------ 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++.... ..++.++.+|++++ ++++.+++
T Consensus 31 vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 31 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM------TFAEQFVAQAGKLM 104 (286)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCH------HHHHHHHHHHHHHc
Confidence 3479999999999999998742210 011111111111 13688999999997 66666554
Q ss_pred -CccEEEEcC-ccCCc---c---cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 -DVNIVFHVA-ATVKF---D---EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 -~VDiViH~A-A~v~f---~---e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
++|+|||+| +.... + +.++..+++|+.|+.++++++... .+..++|++||...+... |
T Consensus 105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 172 (286)
T 1xu9_A 105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY----------P-- 172 (286)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC----------T--
T ss_pred CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC----------C--
Confidence 789999994 54321 2 224578999999999999887542 123599999997653221 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....|+.||+..|.+++.+. .++.+++++|+.|..+..
T Consensus 173 --------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~--------- 217 (286)
T 1xu9_A 173 --------------------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA--------- 217 (286)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH---------
T ss_pred --------------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH---------
Confidence 01469999999998876542 478899999987654310
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.....+ ......++.+++|++++.++...
T Consensus 218 --------~~~~~~---------~~~~~~~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 218 --------MKAVSG---------IVHMQAAPKEECALEIIKGGALR 246 (286)
T ss_dssp --------HHHSCG---------GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred --------HHhccc---------cccCCCCCHHHHHHHHHHHHhcC
Confidence 000011 11234689999999999887643
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.1e-06 Score=97.50 Aligned_cols=196 Identities=17% Similarity=0.089 Sum_probs=124.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+..... +. +.+.+.. ....++.++.+|++++ ++++.+++ .+|
T Consensus 12 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD 84 (270)
T 1yde_A 12 VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE-QELPGAVFILCDVTQE------DDVKTLVSETIRRFGRLD 84 (270)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHCTTEEEEECCTTSH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhcCCeEEEcCCCCH------HHHHHHHHHHHHHcCCCC
Confidence 3478999999999999998743221 11 1111110 1123588999999998 77776654 689
Q ss_pred EEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+|||+||.... . +.++..+++|+.|+.++++++... .+..++|++||...... .+
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------~~----- 149 (270)
T 1yde_A 85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG----------QA----- 149 (270)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC----------CT-----
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCC----------CC-----
Confidence 99999997532 1 225678999999999999988631 12469999999754211 00
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhH
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLT 220 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~ 220 (1217)
....|+.||+..|.+.+.++ .++.+.++||+.|+++...... .......
T Consensus 150 -----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~---~~~~~~~ 203 (270)
T 1yde_A 150 -----------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA---ALMPDPR 203 (270)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH---TTSSSHH
T ss_pred -----------------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhh---hcccchH
Confidence 01369999999999887654 5899999999999886321100 0000011
Q ss_pred HHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 221 AMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 221 ~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
..+...... .....+...+|++++++.++..
T Consensus 204 ~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~ 234 (270)
T 1yde_A 204 ASIREGMLA---------QPLGRMGQPAEVGAAAVFLASE 234 (270)
T ss_dssp HHHHHHHHT---------STTSSCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhc---------CCCCCCcCHHHHHHHHHHHccc
Confidence 111111111 0112367899999998877764
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=2e-06 Score=93.79 Aligned_cols=192 Identities=11% Similarity=0.103 Sum_probs=124.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+.... .-.+.+.++......++.++.+|++++ ++++.+++
T Consensus 10 ~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 10 ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR------QGVDAAVASTVEALG 83 (247)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHHHHHcC
Confidence 448899988999999999874221 011111111111234789999999998 77776654
Q ss_pred CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+||.... . +.++..+++|+.|+.++++++... .+ .++|++||...+... |
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------~-- 150 (247)
T 2jah_A 84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV----------R-- 150 (247)
T ss_dssp CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC----------T--
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC----------C--
Confidence 78999999997532 1 234578999999999999887532 23 699999997653210 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ .++.+.+++|+.|..+.... +.. .
T Consensus 151 --------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~--~ 199 (247)
T 2jah_A 151 --------------------------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH---ITH--T 199 (247)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG---CCC--H
T ss_pred --------------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc---ccc--h
Confidence 01369999998887776543 58999999999987764211 100 0
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.....+... + +. ..++..+|+|++++.++...
T Consensus 200 ~~~~~~~~~--------~--~~--~~~~~pedvA~~v~~l~s~~ 231 (247)
T 2jah_A 200 ATKEMYEQR--------I--SQ--IRKLQAQDIAEAVRYAVTAP 231 (247)
T ss_dssp HHHHHHHHH--------T--TT--SCCBCHHHHHHHHHHHHHSC
T ss_pred hhHHHHHhc--------c--cc--cCCCCHHHHHHHHHHHhCCC
Confidence 000111110 1 00 11588999999999887653
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.23 E-value=6.5e-07 Score=94.14 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=85.2
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy13944 552 VVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFI 621 (1217)
Q Consensus 552 ~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV 621 (1217)
+++.+|++++ ++++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+++. +..+||
T Consensus 45 ~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv 117 (207)
T 2yut_A 45 RALPADLADE------LEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAV 117 (207)
T ss_dssp EECCCCTTSH------HHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEE
T ss_pred cEEEeeCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEE
Confidence 7888999984 46777766 89999999996532 2345578899999999999999654 567999
Q ss_pred EEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccc-
Q psy13944 622 YVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKC- 700 (1217)
Q Consensus 622 ~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~- 700 (1217)
++||..++... + ....|+.||+..|.+++++. +++
T Consensus 118 ~~sS~~~~~~~---------~-----------------------------~~~~Y~~sK~a~~~~~~~~~------~~~~ 153 (207)
T 2yut_A 118 FFGAYPRYVQV---------P-----------------------------GFAAYAAAKGALEAYLEAAR------KELL 153 (207)
T ss_dssp EECCCHHHHSS---------T-----------------------------TBHHHHHHHHHHHHHHHHHH------HHHH
T ss_pred EEcChhhccCC---------C-----------------------------CcchHHHHHHHHHHHHHHHH------HHHh
Confidence 99998765321 0 11259999999999997764 222
Q ss_pred cCCCceeEeccCccc
Q psy13944 701 SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 701 ~~~l~~~i~rp~~v~ 715 (1217)
..++.+.+++|..+.
T Consensus 154 ~~gi~v~~v~pg~v~ 168 (207)
T 2yut_A 154 REGVHLVLVRLPAVA 168 (207)
T ss_dssp TTTCEEEEECCCCBC
T ss_pred hhCCEEEEEecCccc
Confidence 357889999998774
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.2e-06 Score=94.99 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=82.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHH----HHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKG----TEKLLKM 610 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~G----T~nLLel 610 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.| ++.++..
T Consensus 51 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 124 (281)
T 3m1a_A 51 DRAEAISLDVTDGE------RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ 124 (281)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEEeeCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999853 4555544 78999999996432 23455788999999 5555555
Q ss_pred HHhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 611 AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 611 A~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++. +..+||++||..++.. .+ ....|+.||+..|.++.++
T Consensus 125 ~~~~-~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 165 (281)
T 3m1a_A 125 MRER-GSGSVVNISSFGGQLS----------FA----------------------------GFSAYSATKAALEQLSEGL 165 (281)
T ss_dssp HHHH-TCEEEEEECCGGGTCC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhc-CCCEEEEEcCccccCC----------CC----------------------------CchHHHHHHHHHHHHHHHH
Confidence 5654 5679999999764321 00 1125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+..++|.+|-
T Consensus 166 a------~e~~~~gi~v~~v~Pg~v~ 185 (281)
T 3m1a_A 166 A------DEVAPFGIKVLIVEPGAFR 185 (281)
T ss_dssp H------HHHGGGTEEEEEEEECCBC
T ss_pred H------HHhhccCcEEEEEecCccc
Confidence 4 222 347888899998874
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.1e-05 Score=90.27 Aligned_cols=195 Identities=15% Similarity=0.054 Sum_probs=121.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCc-ccCCCeEEEEccCCCCCC-----------CCCHHH
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENA-NFTERIVVLTADLQSDGL-----------GLDEKE 66 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p-~~~~kI~~V~GDl~d~~L-----------GLs~ed 66 (1217)
.-+||+.+.-|....++|.+.... .-.+.+.++.. ....++.++.+|++++.- +-..++
T Consensus 12 ~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~ 91 (291)
T 1e7w_A 12 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTR 91 (291)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHH
T ss_pred EEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHH
Confidence 347888888888999988773211 00111111111 123578999999999820 000005
Q ss_pred HHHhcC-------CccEEEEcCccCCc---------------------ccCHHHHHHHHHHHHHHHHHHhHhc---CC--
Q psy13944 67 KKVLRE-------DVNIVFHVAATVKF---------------------DEHFQTAFEINCKGTEKLLKMAEEM---KN-- 113 (1217)
Q Consensus 67 l~~L~~-------~VDiViH~AA~v~f---------------------~e~l~~a~~vNV~GT~~LLelAk~~---~~-- 113 (1217)
++.+++ .+|++||+||.... .+.++..+++|+.|+..+++++... .+
T Consensus 92 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~ 171 (291)
T 1e7w_A 92 CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK 171 (291)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 555543 78999999997532 2234578899999999999987632 12
Q ss_pred ----CCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-
Q psy13944 114 ----LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM- 188 (1217)
Q Consensus 114 ----lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~- 188 (1217)
..++|++||...+... | ....|+.||+..+.+.+..+
T Consensus 172 ~~~~~g~Iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~ 213 (291)
T 1e7w_A 172 HRGTNYSIINMVDAMTNQPL----------L----------------------------GYTIYTMAKGALEGLTRSAAL 213 (291)
T ss_dssp GSCSCEEEEEECCTTTTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEEechhhcCCC----------C----------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 4689999998654321 0 01369999999998887654
Q ss_pred ----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee-ccccHHHHHHHHHHHHHh
Q psy13944 189 ----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV-DMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 189 ----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~-D~VpVDdVvnAii~aa~~ 260 (1217)
.++.+..++|+.|..+. . . . ......+.... + .. -+...+|+|++++.++..
T Consensus 214 e~~~~gI~vn~v~PG~v~T~~-~-~-------~--~~~~~~~~~~~----p-----~~~r~~~pedvA~~v~~l~s~ 270 (291)
T 1e7w_A 214 ELAPLQIRVNGVGPGLSVLVD-D-M-------P--PAVWEGHRSKV----P-----LYQRDSSAAEVSDVVIFLCSS 270 (291)
T ss_dssp HHGGGTEEEEEEEESSBCCGG-G-S-------C--HHHHHHHHTTC----T-----TTTSCBCHHHHHHHHHHHHSG
T ss_pred HHHhcCeEEEEEeeCCccCCc-c-C-------C--HHHHHHHHhhC----C-----CCCCCCCHHHHHHHHHHHhCC
Confidence 57999999999876543 1 1 0 11111221110 0 11 267899999999888754
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2e-06 Score=93.98 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=91.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 127 (276)
T 1wma_A 54 LSPRFHQLDIDDL------QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 127 (276)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CeeEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHh
Confidence 4688999999984 35555554 79999999996532 3455678999999999999999864
Q ss_pred -CCCcEEEEEccceeecCcc----cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCC-ChhHHHHHHHHHHhh
Q psy13944 615 -KNLDSFIYVSTAYSNCNIK----KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMP-NTYTLSKNAWYIICL 688 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~----~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~p-NtYt~SK~lAE~lv~ 688 (1217)
.+..+||++||..++.... ...+.+...+.+..++........+.......+ ...+| ..|+.||+..|.+++
T Consensus 128 ~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~a~~~~~~ 205 (276)
T 1wma_A 128 IKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ--KEGWPSSAYGVTKIGVTVLSR 205 (276)
T ss_dssp EEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTT--TTTCCSCHHHHHHHHHHHHHH
T ss_pred hCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccc--cCCCccchhHHHHHHHHHHHH
Confidence 1124899999976653210 011111111222222211111100000000000 11222 689999999999998
Q ss_pred hhccccccccccc-----CCCceeEeccCccc
Q psy13944 689 SFWGCARSREKCS-----HDRGVRVCRNHPVG 715 (1217)
Q Consensus 689 ~y~~~a~~~~~~~-----~~l~~~i~rp~~v~ 715 (1217)
++. +.++ .++.+..++|-.|.
T Consensus 206 ~la------~~~~~~~~~~~i~v~~v~PG~v~ 231 (276)
T 1wma_A 206 IHA------RKLSEQRKGDKILLNACCPGWVR 231 (276)
T ss_dssp HHH------HHHHHHCTTSCCEEEEEECCSBC
T ss_pred HHH------HHhhcccCCCceEEEEecCCccc
Confidence 764 2222 47888888998775
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.9e-06 Score=94.35 Aligned_cols=186 Identities=15% Similarity=0.108 Sum_probs=121.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcc---cCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENAN---FTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~---~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++... ...++.++.+|++++ ++++.+++
T Consensus 10 ~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~ 83 (250)
T 3nyw_A 10 AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC------TKADTEIKDIHQ 83 (250)
T ss_dssp EEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH------HHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH------HHHHHHHHHHHH
Confidence 4589999999999999998743211 11111111111 126789999999998 77766654
Q ss_pred ---CccEEEEcCccCC---cc---cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 ---DVNIVFHVAATVK---FD---EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ---~VDiViH~AA~v~---f~---e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|++||+||... ++ +.++..+++|+.|+..+++++... .+..++|++||....... .
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~- 153 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF---------A- 153 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----------------C-
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC---------C-
Confidence 6899999999753 22 234578999999999999887431 244699999997543210 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
. ...|+.||+..+.+.+..+ .++.+..++|+.|..+..
T Consensus 154 ---------------------------~-~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--------- 196 (250)
T 3nyw_A 154 ---------------------------D-GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA--------- 196 (250)
T ss_dssp ---------------------------C-TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH---------
T ss_pred ---------------------------C-CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh---------
Confidence 0 1469999999988877654 579999999987754311
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
..... ......++..+|++++++.++..+..
T Consensus 197 --------~~~~~---------~~~~~~~~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 197 --------KKAGT---------PFKDEEMIQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp --------HHTTC---------CSCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred --------hhcCC---------CcccccCCCHHHHHHHHHHHHcCCCc
Confidence 11000 11223478999999999988875443
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.21 E-value=5.3e-06 Score=90.75 Aligned_cols=184 Identities=14% Similarity=0.104 Sum_probs=118.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----HHH---hhhcCc-ccCCCeEEEEccC--CCCCCCCCHHHHHHhcC-----
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----FDR---LRKENA-NFTERIVVLTADL--QSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~---Lr~~~p-~~~~kI~~V~GDl--~d~~LGLs~edl~~L~~----- 72 (1217)
-+||+.+.-|....++|.+.....+ -+. +.++.. ....++.++.+|+ +++ ++.+.+++
T Consensus 16 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 16 LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTS------ENCQQLAQRIAVN 89 (252)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCH------HHHHHHHHHHHHH
T ss_pred EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCH------HHHHHHHHHHHHh
Confidence 3789998889999999987422210 111 111111 1123788999999 666 66665554
Q ss_pred --CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 --DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 --~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|++||+||... +. +.++..+++|+.|+.++++++... .+..++|++||...+...
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------- 159 (252)
T 3f1l_A 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR---------- 159 (252)
T ss_dssp CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC----------
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC----------
Confidence 6899999999742 21 224578999999999999988421 345699999997653210
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
+ ....|+.||+..+.+.+.++ +.+.+..+.|+.|-.+.
T Consensus 160 ~----------------------------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~---------- 201 (252)
T 3f1l_A 160 A----------------------------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM---------- 201 (252)
T ss_dssp T----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH----------
T ss_pred C----------------------------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch----------
Confidence 0 01369999999998887655 34777777777654421
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
...... ......+...+|++++++.++....
T Consensus 202 -------~~~~~~---------~~~~~~~~~p~dva~~~~~L~s~~~ 232 (252)
T 3f1l_A 202 -------RASAFP---------TEDPQKLKTPADIMPLYLWLMGDDS 232 (252)
T ss_dssp -------HHHHCT---------TCCGGGSBCTGGGHHHHHHHHSGGG
T ss_pred -------hhhhCC---------ccchhccCCHHHHHHHHHHHcCccc
Confidence 111111 1112346788999999888776543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=98.20 E-value=7.9e-07 Score=96.18 Aligned_cols=137 Identities=12% Similarity=0.009 Sum_probs=88.3
Q ss_pred EEcccCCCCCCCCHHHHHHHhc----CccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEccc
Q psy13944 554 LTADLQSDGLGLDEKAKEVLRE----DVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTA 626 (1217)
Q Consensus 554 V~GDltd~~LGLs~~~~~~L~~----~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~---~~lk~fV~vSTa 626 (1217)
+.+|++++ ++++.+++ ++|+|||+||.......++..+++|+.|+.+++++|... .+..+||++||.
T Consensus 42 ~~~D~~~~------~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 115 (255)
T 2dkn_A 42 LSTPGGRE------TAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115 (255)
T ss_dssp TTSHHHHH------HHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred ccCCcccH------HHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence 45787764 35555554 899999999976645678889999999999999988753 245799999999
Q ss_pred eeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccc-cC
Q psy13944 627 YSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKC-SH 702 (1217)
Q Consensus 627 ~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~-~~ 702 (1217)
.+++... +..|.. ...+++........ .....+.|+.||+.+|.+++.+. +.+ ..
T Consensus 116 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~~~------~~~~~~ 174 (255)
T 2dkn_A 116 AATQPGAAELPMVEAM--------------LAGDEARAIELAEQ-QGQTHLAYAGSKYAVTCLARRNV------VDWAGR 174 (255)
T ss_dssp GGGSTTGGGCHHHHHH--------------HHTCHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHTH------HHHHHT
T ss_pred ccccccccccchhhhh--------------cccchhhhhhhccc-cCCcchhHHHHHHHHHHHHHHHH------HHHhhc
Confidence 8876431 111110 00111100000000 00112469999999999997754 122 35
Q ss_pred CCceeEeccCccchh
Q psy13944 703 DRGVRVCRNHPVGET 717 (1217)
Q Consensus 703 ~l~~~i~rp~~v~e~ 717 (1217)
++.+.++||..|...
T Consensus 175 gi~v~~v~pg~v~~~ 189 (255)
T 2dkn_A 175 GVRLNVVAPGAVETP 189 (255)
T ss_dssp TCEEEEEEECCBCSH
T ss_pred CcEEEEEcCCcccch
Confidence 788999999887533
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.20 E-value=2.6e-06 Score=92.89 Aligned_cols=119 Identities=11% Similarity=0.078 Sum_probs=84.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||... + .+.+...+++|+.|+.++++.+..
T Consensus 62 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (260)
T 3awd_A 62 HDVSSVVMDVTNTE------SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR 135 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46899999999853 4555543 6899999999643 1 233457889999999999998864
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..++|++||.+++... |. .....|+.||+..|.+++++
T Consensus 136 ~~~~~~~~~iv~~sS~~~~~~~----------~~--------------------------~~~~~Y~~sK~a~~~~~~~l 179 (260)
T 3awd_A 136 IMLEQKQGVIVAIGSMSGLIVN----------RP--------------------------QQQAAYNASKAGVHQYIRSL 179 (260)
T ss_dssp HHHHHTCEEEEEECCGGGTSCC----------SS--------------------------SCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCEEEEEecchhcccC----------CC--------------------------CCccccHHHHHHHHHHHHHH
Confidence 2 245789999998654321 00 00135999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+.+++|..|-
T Consensus 180 ~------~e~~~~gi~v~~v~pg~v~ 199 (260)
T 3awd_A 180 A------AEWAPHGIRANAVAPTYIE 199 (260)
T ss_dssp H------HHHGGGTEEEEEEEECCBC
T ss_pred H------HHhhhcCeEEEEEEeeeec
Confidence 4 222 347888899998884
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=2.1e-06 Score=94.43 Aligned_cols=153 Identities=13% Similarity=0.100 Sum_probs=105.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++....-.++.++.+|++++ ++++.+++
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 10 CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE------EAVIGTVDSVVRDFG 83 (262)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHHHHHhC
Confidence 4478999999999999998742211 11112121112234788999999998 77666554
Q ss_pred CccEEEEcCccC-C---cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATV-K---FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v-~---f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|+|||+||.. . +. +.++..+++|+.|+.++++++... .+..++|++||...+... |
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 152 (262)
T 1zem_A 84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP----------P- 152 (262)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC----------T-
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------C-
Confidence 789999999965 2 21 235678999999999999887642 234699999997653211 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..+.+.+..+ .++.+.+++|+.|..+
T Consensus 153 ---------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 153 ---------------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp ---------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred ---------------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 01369999988887776543 5899999999987654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.19 E-value=3.6e-06 Score=93.93 Aligned_cols=192 Identities=11% Similarity=0.064 Sum_probs=121.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
-+||+.+.-|....++|.+..... -.+.+.++... ....+.++.+|++++ ++++.+++
T Consensus 37 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 37 LVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDP------DQVAALFAAVRAEFA 110 (281)
T ss_dssp EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCH------HHHHHHHHHHHHHcC
Confidence 379999999999999998742221 11111111111 123368999999998 77776654
Q ss_pred CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc---C--CCCeEEEEcCcccccccccccccccCC
Q psy13944 73 DVNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM---K--NLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~---~--~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|++||+||.... . +.++..+++|+.|+..+++++... . .-.++|++||.......
T Consensus 111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---------- 180 (281)
T 4dry_A 111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR---------- 180 (281)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC----------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC----------
Confidence 57999999997432 1 235578999999998888876542 1 13589999997653210
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
+ ....|+.||+..+.+.+..+ .++.+..++|+.|..+......
T Consensus 181 ~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---- 228 (281)
T 4dry_A 181 P----------------------------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMS---- 228 (281)
T ss_dssp T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----------
T ss_pred C----------------------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhc----
Confidence 0 01369999999998887654 6899999999988765322110
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
.+... . ........++..+|+|++++.++..+..
T Consensus 229 -------------~~~~~-~-~~~~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 229 -------------TGVLQ-A-NGEVAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp -------------CEEEC-T-TSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred -------------chhhh-h-hhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence 00000 0 0000112367899999999988876554
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=1.3e-06 Score=97.66 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=49.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
.+++++.||++++ +++..+++++|+|||+|+..... .|+.++.+++++|++.+++++||+
T Consensus 55 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 55 LGAKLIEASLDDH------QRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp TTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred CCeEEEeCCCCCH------HHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe
Confidence 3588999999984 46888889999999999976532 378999999999999733999986
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.17 E-value=5.2e-06 Score=91.01 Aligned_cols=116 Identities=13% Similarity=0.147 Sum_probs=79.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh--------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR--------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~--------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~- 612 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 136 (266)
T 1xq1_A 63 FQVTGSVCDASLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP 136 (266)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEECCCCCHH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 36889999999853 455544 578999999996432 23455788999999999999984
Q ss_pred ---hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 613 ---EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 613 ---~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+. +..++|++||..++... + ....|+.||+..|.++++
T Consensus 137 ~~~~~-~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~ 177 (266)
T 1xq1_A 137 LLKAS-GCGNIIFMSSIAGVVSA----------S----------------------------VGSIYSATKGALNQLARN 177 (266)
T ss_dssp HHHHH-SSCEEEEEC------------------------------------------------CCHHHHHHHHHHHHHHH
T ss_pred HHHhc-CCcEEEEEccchhccCC----------C----------------------------CCchHHHHHHHHHHHHHH
Confidence 33 56799999998654320 0 113699999999999977
Q ss_pred hcccccccccc-cCCCceeEeccCccc
Q psy13944 690 FWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+. +.+ ..++.+.+++|..|.
T Consensus 178 la------~e~~~~gi~v~~v~Pg~v~ 198 (266)
T 1xq1_A 178 LA------CEWASDGIRANAVAPAVIA 198 (266)
T ss_dssp HH------HHHGGGTCEEEEEECCSCC
T ss_pred HH------HHHhHhCcEEEEEeeCCCc
Confidence 64 222 347888899998875
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.17 E-value=7.7e-06 Score=91.30 Aligned_cols=186 Identities=10% Similarity=0.062 Sum_probs=121.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-hHH--------------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-AFD--------------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-vfd--------------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~- 72 (1217)
-+||+.+.-|....++|.+..... +.+ .+.++......++.++.+|++++ ++++.+++
T Consensus 13 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~ 86 (285)
T 3sc4_A 13 FISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDG------DAVAAAVAK 86 (285)
T ss_dssp EEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSH------HHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHH
Confidence 478888888888888887632211 111 11111112235789999999998 77776665
Q ss_pred ------CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccc
Q psy13944 73 ------DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 73 ------~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
.+|++||+||.... . +.++..+++|+.|+.++++++... .+..++|++||.......
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------- 159 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK------- 159 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-------
Confidence 78999999997532 1 234578889999999999988653 134589999997543210
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
+ .....|+.||+..+.+.+..+ .++.+..+.|+.+..+
T Consensus 160 ~------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t------- 202 (285)
T 3sc4_A 160 W------------------------------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT------- 202 (285)
T ss_dssp G------------------------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC-------
T ss_pred C------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc-------
Confidence 0 001469999999998887654 5799999999732221
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.+....... ......+...+|+|++++.++...
T Consensus 203 ---------~~~~~~~~~--------~~~~~r~~~pedvA~~~~~l~s~~ 235 (285)
T 3sc4_A 203 ---------AAVQNLLGG--------DEAMARSRKPEVYADAAYVVLNKP 235 (285)
T ss_dssp ---------HHHHHHHTS--------CCCCTTCBCTHHHHHHHHHHHTSC
T ss_pred ---------HHHHhhccc--------cccccCCCCHHHHHHHHHHHhCCc
Confidence 111111111 111234678899999998887643
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=6e-06 Score=90.89 Aligned_cols=117 Identities=19% Similarity=0.223 Sum_probs=86.3
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc---------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f---------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 65 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 138 (278)
T 2bgk_A 65 VISFVHCDVTKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAAR 138 (278)
T ss_dssp TEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 6899999999853 5555554 78999999996532 144567899999999999999876
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..+||++||..++.... .....|+.||+..|.+++++
T Consensus 139 ~~~~~~~~~iv~isS~~~~~~~~-------------------------------------~~~~~Y~~sK~a~~~~~~~l 181 (278)
T 2bgk_A 139 VMIPAKKGSIVFTASISSFTAGE-------------------------------------GVSHVYTATKHAVLGLTTSL 181 (278)
T ss_dssp HHGGGTCEEEEEECCGGGTCCCT-------------------------------------TSCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCeEEEEeeccccCCCC-------------------------------------CCCcchHHHHHHHHHHHHHH
Confidence 3 2456999999987654310 01125999999999999776
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+.+++|..|.
T Consensus 182 a------~e~~~~gi~v~~v~Pg~v~ 201 (278)
T 2bgk_A 182 C------TELGEYGIRVNCVSPYIVA 201 (278)
T ss_dssp H------HHHGGGTEEEEEEEESCCS
T ss_pred H------HHHhhcCcEEEEEEeceec
Confidence 4 122 357888889998874
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=3.5e-06 Score=91.38 Aligned_cols=181 Identities=9% Similarity=-0.030 Sum_probs=119.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---------CccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---------DVNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---------~VDiVi 78 (1217)
.-+||+.+.-|....++|.+.... +.-.-|.. ........++.+|++++ ++++.+++ ++|+||
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~-~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 10 VLVYGGRGALGSRCVQAFRARNWW-VASIDVVE-NEEASASVIVKMTDSFT------EQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCE-EEEEESSC-CTTSSEEEECCCCSCHH------HHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCcHHHHHHHHHHHhCCCE-EEEEeCCh-hhccCCcEEEEcCCCCH------HHHHHHHHHHHHHhCCCCCCEEE
Confidence 448899999999999999874322 22111111 11223467788999987 67666553 789999
Q ss_pred EcCccCC---c-c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 79 HVAATVK---F-D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 79 H~AA~v~---f-~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
|+||... + . +.++..+++|+.|+.++++++... ..-.++|++||...+... +
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--------- 142 (241)
T 1dhr_A 82 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT----------P--------- 142 (241)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------T---------
T ss_pred EcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC----------C---------
Confidence 9999753 1 1 234578899999999999998652 112489999998664321 0
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
....|+.||+..|.+.+..+ .++.+.+++|+.|-.+..
T Consensus 143 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~---------------- 187 (241)
T 1dhr_A 143 -------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN---------------- 187 (241)
T ss_dssp -------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH----------------
T ss_pred -------------------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc----------------
Confidence 01369999999999988764 258889999987654311
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
...... ......++.+|+|++++.++..
T Consensus 188 -~~~~~~---------~~~~~~~~~~~vA~~v~~l~~~ 215 (241)
T 1dhr_A 188 -RKSMPE---------ADFSSWTPLEFLVETFHDWITG 215 (241)
T ss_dssp -HHHSTT---------SCGGGSEEHHHHHHHHHHHHTT
T ss_pred -cccCcc---------hhhccCCCHHHHHHHHHHHhcC
Confidence 010000 1123467899999999877754
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=5.7e-07 Score=102.74 Aligned_cols=164 Identities=16% Similarity=0.104 Sum_probs=104.9
Q ss_pred CCcccCCCCCCcccHHHHHHHHh--------cChhHHHhh------hcCcccCC-CeEEEEccCCCCCCCCCHHHHHHhc
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFF--------ADDAFDRLR------KENANFTE-RIVVLTADLQSDGLGLDEKEKKVLR 71 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l--------~~~vfd~Lr------~~~p~~~~-kI~~V~GDl~d~~LGLs~edl~~L~ 71 (1217)
+...||+.+.-|.++..+|.+.- +-.++|+.. ....+..+ .+.++ +|+.+. +++...+
T Consensus 6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~------~~~~~a~ 78 (327)
T 1y7t_A 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEAT------DDPKVAF 78 (327)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEE------SCHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEec------cChHHHh
Confidence 45689999999999988887521 112233211 00001111 11223 577654 4556667
Q ss_pred CCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHhHhcCCCC-eEEEEcCcc-cccccccccccccCCCCChHHHHH
Q psy13944 72 EDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLD-SFIYVSTAY-SNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-~e~l~~a~~vNV~GT~~LLelAk~~~~lk-~fV~vSTa~-v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
+++|+|||+||..+- .++..++++.|+.+|.+++++|++..+.+ +++++|+.. +.. .+.++.. ++
T Consensus 79 ~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~---~~~~~~~-~~-------- 146 (327)
T 1y7t_A 79 KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA---LIAYKNA-PG-------- 146 (327)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH---HHHHHTC-TT--------
T ss_pred CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH---HHHHHHc-CC--------
Confidence 899999999998653 35567899999999999999999863244 677766532 000 0001000 00
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCC
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEE 207 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~e 207 (1217)
..| .+.|+.||+.+|+++..++ .+++.+++||++|||+..+
T Consensus 147 ------------~~p------~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 147 ------------LNP------RNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp ------------SCG------GGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred ------------CCh------hheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 000 1459999999999988776 6899999999999998653
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.11 E-value=5.9e-06 Score=92.12 Aligned_cols=189 Identities=13% Similarity=0.036 Sum_probs=122.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcCc-ccCCCeEEEEccCCC----CCCCCCHHHHHHhcC-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------AFDRLRKENA-NFTERIVVLTADLQS----DGLGLDEKEKKVLRE- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p-~~~~kI~~V~GDl~d----~~LGLs~edl~~L~~- 72 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++.. ..-.++.++.+|+++ + ++++.+++
T Consensus 26 ~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~------~~v~~~~~~ 99 (288)
T 2x9g_A 26 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLP------ASCEEIINS 99 (288)
T ss_dssp EEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHH------HHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCH------HHHHHHHHH
Confidence 3478999999999999998743211 1111111111 123578999999999 6 66665554
Q ss_pred ------CccEEEEcCccCC---c-----cc---------CHHHHHHHHHHHHHHHHHHhHhc-C--C------CCeEEEE
Q psy13944 73 ------DVNIVFHVAATVK---F-----DE---------HFQTAFEINCKGTEKLLKMAEEM-K--N------LDSFIYV 120 (1217)
Q Consensus 73 ------~VDiViH~AA~v~---f-----~e---------~l~~a~~vNV~GT~~LLelAk~~-~--~------lk~fV~v 120 (1217)
.+|+|||+||... + .+ .++..+++|+.|+..+++.+... . + ..++|++
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 7899999999753 2 11 23468899999999999887642 1 1 3589999
Q ss_pred cCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEE
Q psy13944 121 STAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGI 195 (1217)
Q Consensus 121 STa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvI 195 (1217)
||...+... + ....|+.||+..+.+.+..+ .++.+.+
T Consensus 180 sS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 221 (288)
T 2x9g_A 180 CDAMVDQPC----------M----------------------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNG 221 (288)
T ss_dssp CCTTTTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred ecccccCCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEE
Confidence 998654310 0 01369999998887776543 5899999
Q ss_pred EecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc-ccHHHHHHHHHHHHHh
Q psy13944 196 VRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM-VPGDLVVNILLAAAWD 260 (1217)
Q Consensus 196 vRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~-VpVDdVvnAii~aa~~ 260 (1217)
++|+.|.++. .. . +. ....+.... + ...+ ...+|+|++++.++..
T Consensus 222 v~PG~v~t~~-~~----~-----~~-~~~~~~~~~----p-----~~r~~~~pedvA~~v~~l~s~ 267 (288)
T 2x9g_A 222 VAPGVSLLPV-AM----G-----EE-EKDKWRRKV----P-----LGRREASAEQIADAVIFLVSG 267 (288)
T ss_dssp EEESSCSCCT-TS----C-----HH-HHHHHHHTC----T-----TTSSCCCHHHHHHHHHHHHSG
T ss_pred EEeccccCcc-cc----C-----hH-HHHHHHhhC----C-----CCCCCCCHHHHHHHHHHHhCc
Confidence 9999998875 21 0 11 111111111 0 1124 6889999999988764
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.09 E-value=2.4e-06 Score=97.49 Aligned_cols=153 Identities=14% Similarity=0.103 Sum_probs=104.8
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-h-----------HHHhhhcC--cccCCCeEEEEccCCCCCCCCCHHHHHHhcCC-
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-A-----------FDRLRKEN--ANFTERIVVLTADLQSDGLGLDEKEKKVLRED- 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-v-----------fd~Lr~~~--p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~- 73 (1217)
-+||+.+.-|..+.++|.+..... + -..+.... .....++.++.+|++++ ++++.+++.
T Consensus 6 lVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~------~~v~~~~~~~ 79 (327)
T 1jtv_A 6 LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS------KSVAAARERV 79 (327)
T ss_dssp EESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH------HHHHHHHHTC
T ss_pred EEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCH------HHHHHHHHHH
Confidence 368888888888888887632210 0 00010000 01125789999999998 788777654
Q ss_pred ----ccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCC
Q psy13944 74 ----VNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 74 ----VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
+|+|||+||.... . +.++..+++|+.|+.++++++.. + .+..++|++||...+...
T Consensus 80 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~---------- 149 (327)
T 1jtv_A 80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL---------- 149 (327)
T ss_dssp TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC----------
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC----------
Confidence 8999999997432 1 23557899999999999998632 1 245799999997653210
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
+ .-..|+.||+..|.+.+..+ .++.+.+++|+.|..+.
T Consensus 150 ~----------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 150 P----------------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred C----------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 0 01369999999999887654 58999999999988764
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.6e-05 Score=85.53 Aligned_cols=124 Identities=12% Similarity=0.093 Sum_probs=85.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc---------CccEEEEcCcccc-c-------hhcHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE---------DVNIVFHVAATVK-F-------DEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~---------~vdvVfH~AA~v~-f-------~~~~~~~~~~NV~GT~nLLelA 611 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||... . .+.++..+++|+.|+.++++.+
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~ 124 (250)
T 1yo6_A 51 SRVHVLPLTVTCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL 124 (250)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred CceEEEEeecCCHH------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 46899999999853 4555544 7999999999654 1 2345578899999999999887
Q ss_pred Hhc---C------C-----CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhH
Q psy13944 612 EEM---K------N-----LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYT 677 (1217)
Q Consensus 612 ~~~---~------~-----lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt 677 (1217)
... . + ..+||++||..++..... +..++ .....|+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~~~~-----------------------------~~~~~Y~ 173 (250)
T 1yo6_A 125 LPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT--SGSAQ-----------------------------FPVLAYR 173 (250)
T ss_dssp HHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC--STTSS-----------------------------SCBHHHH
T ss_pred HHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc--ccccc-----------------------------CCccHHH
Confidence 643 0 2 568999999865432110 00000 0112599
Q ss_pred HHHHHHHHHhhhhcccccccccc-cCCCceeEeccCccc
Q psy13944 678 LSKNAWYIICLSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 678 ~SK~lAE~lv~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.||+..|.+++++. +.+ ..++.+..++|..|.
T Consensus 174 ~sK~a~~~~~~~la------~e~~~~gi~v~~v~Pg~v~ 206 (250)
T 1yo6_A 174 MSKAAINMFGRTLA------VDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp HHHHHHHHHHHHHH------HHTGGGTCEEEEEECCCC-
T ss_pred HHHHHHHHHHHHHH------HHhccCCeEEEEEcCCcee
Confidence 99999999998764 222 347888888998774
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.08 E-value=1.5e-05 Score=91.84 Aligned_cols=184 Identities=12% Similarity=0.128 Sum_probs=121.5
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh-hHH--------------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD-AFD--------------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~-vfd--------------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
+||+.+.-|....++|.+...+. +.+ .+.++....-.++.++.+|++++ ++++.+++
T Consensus 50 VTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~------~~v~~~~~~~ 123 (346)
T 3kvo_A 50 ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDE------QQISAAVEKA 123 (346)
T ss_dssp EETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHHH
T ss_pred EeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCH------HHHHHHHHHH
Confidence 78999888999999998743221 111 11111112235788999999998 77776664
Q ss_pred -----CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 73 -----DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 -----~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|+|||+||.... .+.++..+++|+.|+.+++++|... .+..++|++||........ +
T Consensus 124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~------~ 197 (346)
T 3kvo_A 124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW------F 197 (346)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG------T
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC------C
Confidence 78999999997532 1234578999999999999998432 2446999999976532200 0
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
+ .-..|+.||+..+.+.+..+ .++.+..+.|+.+..+.
T Consensus 198 ~------------------------------~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-------- 239 (346)
T 3kvo_A 198 K------------------------------QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-------- 239 (346)
T ss_dssp S------------------------------SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--------
T ss_pred C------------------------------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--------
Confidence 0 01369999999998887654 57888889998533320
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
+...+ .+ .....-+...+|+|++++.++..
T Consensus 240 --------~~~~~-~~--------~~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 240 --------AMDML-GG--------PGIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp --------HHHHH-CC----------CGGGCBCTHHHHHHHHHHHTS
T ss_pred --------HHHhh-cc--------ccccccCCCHHHHHHHHHHHHhc
Confidence 11111 11 01123466889999999988876
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.08 E-value=6.1e-06 Score=92.14 Aligned_cols=128 Identities=14% Similarity=0.092 Sum_probs=86.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-----hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSF 620 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-----~~~~~~~~~~NV~GT~nLLelA~~~~~lk~f 620 (1217)
.++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... ..+++
T Consensus 62 ~~~~~~~~Dl~d~------~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~ri 134 (291)
T 3rd5_A 62 GQVEVRELDLQDL------SSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRV 134 (291)
T ss_dssp SEEEEEECCTTCH------HHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEE
T ss_pred CCeeEEEcCCCCH------HHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhe
Confidence 5789999999985 46777765 57999999996532 2344578999999999999999875 45699
Q ss_pred EEEccceeecCccccccccc-CCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccccc
Q psy13944 621 IYVSTAYSNCNIKKIEEKFY-EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREK 699 (1217)
Q Consensus 621 V~vSTa~v~g~~~~I~E~~y-~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~ 699 (1217)
|++||...+......++... ..+..+ ...|+.||++.|.+++++. ++
T Consensus 135 v~isS~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~Y~~sK~a~~~~~~~la------~e 182 (291)
T 3rd5_A 135 VTVSSMAHWPGRINLEDLNWRSRRYSP--------------------------WLAYSQSKLANLLFTSELQ------RR 182 (291)
T ss_dssp EEECCGGGTTCCCCSSCTTCSSSCCCH--------------------------HHHHHHHHHHHHHHHHHHH------HH
T ss_pred eEeechhhccCCCCcccccccccCCCC--------------------------cchHHHHHHHHHHHHHHHH------HH
Confidence 99999876543211110000 000000 1259999999999998764 22
Q ss_pred cc-CC--CceeEeccCccc
Q psy13944 700 CS-HD--RGVRVCRNHPVG 715 (1217)
Q Consensus 700 ~~-~~--l~~~i~rp~~v~ 715 (1217)
++ .+ +.+..++|-.|.
T Consensus 183 ~~~~g~~i~v~~v~PG~v~ 201 (291)
T 3rd5_A 183 LTAAGSPLRALAAHPGYSH 201 (291)
T ss_dssp HHHTTCCCEEEEECCSGGG
T ss_pred HhhCCCCEEEEEeeCCCCc
Confidence 22 23 667777887774
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.08 E-value=5.6e-06 Score=91.38 Aligned_cols=149 Identities=17% Similarity=0.136 Sum_probs=104.5
Q ss_pred CcccCC--CCCCcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 8 LGHNGA--KTCKHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 8 ~g~tg~--r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
.=+||+ .+.-|....++|.+..... ..+.+.++ ...++.++.+|++++ ++++.+++
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~ 80 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNE------EHLASLAGRVTE 80 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCH------HHHHHHHHHHHH
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCH------HHHHHHHHHHHH
Confidence 347888 7788899999998742211 11222222 234688999999998 77776654
Q ss_pred ------CccEEEEcCccCC--------c-c---cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccccccccccc
Q psy13944 73 ------DVNIVFHVAATVK--------F-D---EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIE 133 (1217)
Q Consensus 73 ------~VDiViH~AA~v~--------f-~---e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~ 133 (1217)
.+|++||+||... + + +.++..+++|+.|+.++++++... ..-.++|++||...++.
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~----- 155 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM----- 155 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC-----
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc-----
Confidence 7999999999754 1 1 234578899999999999998652 11148999998653211
Q ss_pred ccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 134 EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 134 E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
+ .-..|+.||+..+.+.+.++ .++.+..++|+.|-.+
T Consensus 156 ------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 156 ------P----------------------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp ------T----------------------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred ------C----------------------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 0 01369999999998887654 5899999999987554
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.08 E-value=1e-05 Score=88.69 Aligned_cols=121 Identities=17% Similarity=0.087 Sum_probs=85.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc---------CccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE---------DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~---------~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA 611 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||... + .+.++..+++|+.|+.++++.+
T Consensus 72 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 145 (267)
T 1sny_A 72 SNIHILEIDLRNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC 145 (267)
T ss_dssp TTEEEEECCTTCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEEEecCCChH------HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHH
Confidence 46899999999864 3444443 7999999999654 1 2445578899999999999988
Q ss_pred Hhc----------CC----CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhH
Q psy13944 612 EEM----------KN----LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYT 677 (1217)
Q Consensus 612 ~~~----------~~----lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt 677 (1217)
... +. ..+||++||..++.... +. .....|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~--------------------------~~~~~Y~ 190 (267)
T 1sny_A 146 LPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN---------TD--------------------------GGMYAYR 190 (267)
T ss_dssp HHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC---------CS--------------------------CCCHHHH
T ss_pred HHHHhhcccccccccccCCCceEEEEecccccccCC---------CC--------------------------CCchHHH
Confidence 653 10 35899999986653210 00 0112599
Q ss_pred HHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 678 LSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 678 ~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.||+..|.+++++. ++-...++.+..++|..|.
T Consensus 191 ~sK~a~~~~~~~la-----~e~~~~gi~v~~v~Pg~v~ 223 (267)
T 1sny_A 191 TSKSALNAATKSLS-----VDLYPQRIMCVSLHPGWVK 223 (267)
T ss_dssp HHHHHHHHHHHHHH-----HHHGGGTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHH-----HHhhcCCcEEEEeCCccee
Confidence 99999999998764 1112347888899998885
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.07 E-value=1e-05 Score=87.36 Aligned_cols=118 Identities=14% Similarity=0.142 Sum_probs=85.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 58 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (244)
T 2bd0_A 58 ALTDTITADISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 131 (244)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeeEEEecCCCHH------HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46899999999853 4555543 69999999996532 2345578899999999999988531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||..++... + ....|+.||+..|.+++++.
T Consensus 132 ~~~~~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 173 (244)
T 2bd0_A 132 MERQHSGHIFFITSVAATKAF----------R----------------------------HSSIYCMSKFGQRGLVETMR 173 (244)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEEecchhcCCC----------C----------------------------CCchhHHHHHHHHHHHHHHH
Confidence 246799999998664320 0 11259999999999997653
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+.+++|..|.
T Consensus 174 -----~e~~~~gi~v~~v~Pg~v~ 192 (244)
T 2bd0_A 174 -----LYARKCNVRITDVQPGAVY 192 (244)
T ss_dssp -----HHHTTTTEEEEEEEECCBC
T ss_pred -----HHhhccCcEEEEEECCCcc
Confidence 1112457888888998774
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=8.1e-06 Score=86.93 Aligned_cols=106 Identities=17% Similarity=0.157 Sum_probs=79.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.++.++.+|++++ ++++.+++++|+|||+|+.. |+. ++++++.+++. +.++||++||..+
T Consensus 52 ~~~~~~~~D~~d~------~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 52 ERVTVIEGSFQNP------GXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGL 111 (221)
T ss_dssp TTEEEEECCTTCH------HHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTT
T ss_pred CceEEEECCCCCH------HHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeecee
Confidence 4689999999984 47888889999999999964 445 89999999986 7889999999887
Q ss_pred ecCccc-ccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCcee
Q psy13944 629 NCNIKK-IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVR 707 (1217)
Q Consensus 629 ~g~~~~-I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~ 707 (1217)
++.... ..+. . ....++.|+.+|..+|.++.. .++.+.
T Consensus 112 ~~~~~~~~~~~--------------------------~---~~~~~~~y~~~K~~~e~~~~~------------~~i~~~ 150 (221)
T 3r6d_A 112 SGEFPVALEKW--------------------------T---FDNLPISYVQGERQARNVLRE------------SNLNYT 150 (221)
T ss_dssp TSCSCHHHHHH--------------------------H---HHTSCHHHHHHHHHHHHHHHH------------SCSEEE
T ss_pred cCCCCcccccc--------------------------c---ccccccHHHHHHHHHHHHHHh------------CCCCEE
Confidence 764210 0000 0 001123699999999998842 478899
Q ss_pred EeccCccc
Q psy13944 708 VCRNHPVG 715 (1217)
Q Consensus 708 i~rp~~v~ 715 (1217)
++||..+.
T Consensus 151 ~vrpg~v~ 158 (221)
T 3r6d_A 151 ILRLTWLY 158 (221)
T ss_dssp EEEECEEE
T ss_pred EEechhhc
Confidence 99998884
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.05 E-value=6.2e-06 Score=89.16 Aligned_cols=116 Identities=13% Similarity=0.127 Sum_probs=76.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 128 (247)
T 2hq1_A 55 INVVVAKGDVKNPE------DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI 128 (247)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46899999999853 4555544 78999999996532 1234478899999999988887642
Q ss_pred ---CCCcEEEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+..+||++||... ++. | ....|+.||+..|.+++++
T Consensus 129 ~~~~~~~~iv~~sS~~~~~~~-----------~----------------------------~~~~Y~~sK~a~~~~~~~l 169 (247)
T 2hq1_A 129 MLKQKSGKIINITSIAGIIGN-----------A----------------------------GQANYAASKAGLIGFTKSI 169 (247)
T ss_dssp HHHHTCEEEEEECC------------------------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEcChhhccCC-----------C----------------------------CCcHhHHHHHHHHHHHHHH
Confidence 24679999999743 321 0 0125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+.+++|..+.
T Consensus 170 a------~e~~~~gi~v~~v~Pg~v~ 189 (247)
T 2hq1_A 170 A------KEFAAKGIYCNAVAPGIIK 189 (247)
T ss_dssp H------HHHGGGTEEEEEEEECSBC
T ss_pred H------HHHHHcCcEEEEEEEEEEe
Confidence 4 222 346777888887774
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.04 E-value=9.8e-06 Score=87.41 Aligned_cols=118 Identities=12% Similarity=0.164 Sum_probs=85.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 51 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 124 (244)
T 1edo_A 51 GQAITFGGDVSKE------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4688999999985 35555554 68999999996542 2345578899999999999988753
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||..+... .| ....|+.||+..|.+++++.
T Consensus 125 ~~~~~~~~iv~~sS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la 166 (244)
T 1edo_A 125 MMKKRKGRIINIASVVGLIG----------NI----------------------------GQANYAAAKAGVIGFSKTAA 166 (244)
T ss_dssp HHHHTCEEEEEECCTHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEECChhhcCC----------CC----------------------------CCccchhhHHHHHHHHHHHH
Confidence 24679999999754321 00 01259999999999997754
Q ss_pred ccccccccc-cCCCceeEeccCccch
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
+++ ..++.+.+++|..|..
T Consensus 167 ------~e~~~~gi~v~~v~Pg~v~t 186 (244)
T 1edo_A 167 ------REGASRNINVNVVCPGFIAS 186 (244)
T ss_dssp ------HHHHTTTEEEEEEEECSBCS
T ss_pred ------HHhhhcCCEEEEEeeCcccc
Confidence 222 3578888899988853
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.3e-05 Score=86.38 Aligned_cols=117 Identities=10% Similarity=0.123 Sum_probs=84.2
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH---
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE--- 612 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~--- 612 (1217)
++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 69 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 142 (260)
T 3un1_A 69 DIHTVAGDISKPE------TADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEM 142 (260)
T ss_dssp TEEEEESCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ceEEEEccCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 6899999999853 5555554 79999999996431 23455788999999999999883
Q ss_pred -hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 613 -EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 613 -~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+. +..++|++||..+..... ......|+.||+..|.+++++.
T Consensus 143 ~~~-~~g~iv~isS~~~~~~~~------------------------------------~~~~~~Y~~sKaa~~~l~~~la 185 (260)
T 3un1_A 143 LKQ-GSGHIVSITTSLVDQPMV------------------------------------GMPSALASLTKGGLNAVTRSLA 185 (260)
T ss_dssp HHT-TCEEEEEECCTTTTSCBT------------------------------------TCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHc-CCcEEEEEechhhccCCC------------------------------------CCccHHHHHHHHHHHHHHHHHH
Confidence 33 567899999976532210 0011259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|..|-
T Consensus 186 ------~e~~~~gI~vn~v~PG~v~ 204 (260)
T 3un1_A 186 ------MEFSRSGVRVNAVSPGVIK 204 (260)
T ss_dssp ------HHTTTTTEEEEEEEECCBC
T ss_pred ------HHhCcCCeEEEEEeecCCC
Confidence 223 347888888898774
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.04 E-value=1.5e-05 Score=85.91 Aligned_cols=116 Identities=21% Similarity=0.201 Sum_probs=84.1
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---CC
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KN 616 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~~ 616 (1217)
+++++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 53 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 126 (244)
T 1cyd_A 53 GIEPVCVDLGDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG 126 (244)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEecCCCH------HHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC
Confidence 466779999984 46666665 48999999996432 2345578899999999999988753 12
Q ss_pred -CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 617 -LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 617 -lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
..+||++||..++... | ....|+.||+..|.+++++.
T Consensus 127 ~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~~a---- 164 (244)
T 1cyd_A 127 VPGSIVNVSSMVAHVTF----------P----------------------------NLITYSSTKGAMTMLTKAMA---- 164 (244)
T ss_dssp CCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHH----
T ss_pred CCeEEEEEcchhhcCCC----------C----------------------------CcchhHHHHHHHHHHHHHHH----
Confidence 5689999998665421 0 01259999999999998764
Q ss_pred ccccc-cCCCceeEeccCccc
Q psy13944 696 SREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 696 ~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..++|..|-
T Consensus 165 --~~~~~~gi~v~~v~pg~v~ 183 (244)
T 1cyd_A 165 --MELGPHKIRVNSVNPTVVL 183 (244)
T ss_dssp --HHHGGGTEEEEEEEECCBT
T ss_pred --HHhhhcCeEEEEEecCccc
Confidence 222 347888888998775
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.04 E-value=8.7e-06 Score=90.51 Aligned_cols=153 Identities=14% Similarity=0.091 Sum_probs=106.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC------C
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------D 73 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------~ 73 (1217)
.-+||+.+.-|....++|.+..... -.+.+.++......++.++.+|++++ ++.+.+++ .
T Consensus 36 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 36 ALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEA------GAGTDLIERAEAIAP 109 (275)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTST------THHHHHHHHHHHHSC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCH------HHHHHHHHHHHHhCC
Confidence 3489999999999999998743221 11112222122346789999999998 66665554 7
Q ss_pred ccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|++||+||.... . +.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~--- 176 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK----------S--- 176 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T---
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC----------C---
Confidence 8999999997432 1 234578999999999999987431 244689999997653210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..+.+.+..+ .++.+..++|+.|..+
T Consensus 177 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 177 -------------------------VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp -------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred -------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence 01359999999998887654 5899999999988765
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.1e-05 Score=88.52 Aligned_cols=118 Identities=15% Similarity=0.166 Sum_probs=84.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh--------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR--------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~--------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 131 (260)
T 2ae2_A 58 FKVEASVCDLSSRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 131 (260)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999853 455554 579999999996432 234557889999999999999852
Q ss_pred ---cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 ---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
..+..++|++||..++.. .| ....|+.||+..|.+++++
T Consensus 132 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 173 (260)
T 2ae2_A 132 FLKASERGNVVFISSVSGALA----------VP----------------------------YEAVYGATKGAMDQLTRCL 173 (260)
T ss_dssp HHHHTSSEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEcchhhccC----------CC----------------------------CcchHHHHHHHHHHHHHHH
Confidence 124679999999765321 00 0125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccch
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
. +.+ ..++.+..++|..|.-
T Consensus 174 a------~e~~~~gi~v~~v~Pg~v~t 194 (260)
T 2ae2_A 174 A------FEWAKDNIRVNGVGPGVIAT 194 (260)
T ss_dssp H------HHTGGGTEEEEEEEECSBCS
T ss_pred H------HHHhhcCcEEEEEecCCCCC
Confidence 4 222 3477888888988753
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.7e-06 Score=90.39 Aligned_cols=118 Identities=18% Similarity=0.169 Sum_probs=83.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC-------c-cEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED-------V-NIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~-------v-dvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.++++ + |+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 136 (264)
T 2pd6_A 63 GNHAAFQADVSEAR------AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQ 136 (264)
T ss_dssp -CCEEEECCTTSHH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cceEEEEecCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 46889999999853 45555443 4 999999996542 234557899999999999999875
Q ss_pred c---CC-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 614 M---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 614 ~---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
. .+ ..+||++||..+.... | ....|+.||+..|.++++
T Consensus 137 ~~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~ 178 (264)
T 2pd6_A 137 ALVSNGCRGSIINISSIVGKVGN----------V----------------------------GQTNYAASKAGVIGLTQT 178 (264)
T ss_dssp HHHHHTCCEEEEEECCTHHHHCC----------T----------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCceEEEECChhhccCC----------C----------------------------CChhhHHHHHHHHHHHHH
Confidence 3 12 4689999997543210 0 012599999999999977
Q ss_pred hcccccccccccCCCceeEeccCccc
Q psy13944 690 FWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+. ++--..++.+.+++|..|.
T Consensus 179 la-----~e~~~~gi~v~~v~Pg~v~ 199 (264)
T 2pd6_A 179 AA-----RELGRHGIRCNSVLPGFIA 199 (264)
T ss_dssp HH-----HHHGGGTEEEEEEEECSBC
T ss_pred HH-----HHhhhcCeEEEEEeeeccc
Confidence 54 1111347888889998774
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=2.1e-05 Score=85.99 Aligned_cols=192 Identities=11% Similarity=0.024 Sum_probs=112.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-hHH-------HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh-------cCC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-AFD-------RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL-------RED 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-vfd-------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L-------~~~ 73 (1217)
-+||+.+.-|....++|.+..... +.+ .+.+ ......++..+ |. ++++.+ ...
T Consensus 5 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~--d~---------~~v~~~~~~~~~~~g~ 72 (254)
T 1zmt_A 5 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM--SE---------QEPAELIEAVTSAYGQ 72 (254)
T ss_dssp EESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC--CC---------CSHHHHHHHHHHHHSC
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE--CH---------HHHHHHHHHHHHHhCC
Confidence 368888889999999998742211 111 1110 00001233333 32 222222 247
Q ss_pred ccEEEEcCccC-Cc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATV-KF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v-~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|+|||+||.. .. . +.++..+++|+.|+.++++++... .+..++|++||...+... +
T Consensus 73 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 140 (254)
T 1zmt_A 73 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----------K-- 140 (254)
T ss_dssp CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC----------T--
T ss_pred CCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC----------C--
Confidence 89999999975 21 1 234578999999999999887421 234699999997653210 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ .++.+.+++|+.|+|+...... ..+-..
T Consensus 141 --------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~-~T~~~~ 193 (254)
T 1zmt_A 141 --------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY-PTEPWK 193 (254)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC-BHHHHT
T ss_pred --------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccC-CCcccc
Confidence 01369999999998887654 5899999999999887432110 000000
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
........+... . ....+...+|+|++++.++..
T Consensus 194 ~~~~~~~~~~~~----~-----p~~~~~~p~dvA~~v~~l~s~ 227 (254)
T 1zmt_A 194 TNPEHVAHVKKV----T-----ALQRLGTQKELGELVAFLASG 227 (254)
T ss_dssp TCHHHHHHHHHH----S-----SSSSCBCHHHHHHHHHHHHTT
T ss_pred cChHHHHHHhcc----C-----CCCCCcCHHHHHHHHHHHhCc
Confidence 000111111111 0 112367899999999887754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=9e-06 Score=90.55 Aligned_cols=199 Identities=15% Similarity=0.085 Sum_probs=123.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Ccc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVN 75 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VD 75 (1217)
.-+||+.+.-|....++|.+...+ +--+.+.+.......++.++.+|++++ ++++.+++ .+|
T Consensus 8 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 8 ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSL------QDQKRAAERCLAAFGKID 81 (281)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCH------HHHHHHHHHHHHhcCCCC
Confidence 347899988999999999874322 111222222122346889999999998 77666554 679
Q ss_pred EEEEcCccCCcc------------cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 76 IVFHVAATVKFD------------EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 76 iViH~AA~v~f~------------e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
++||+||..... +.++..+++|+.|+.++++++... ++-.++|++||...+... +
T Consensus 82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~- 150 (281)
T 3zv4_A 82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN----------G- 150 (281)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS----------S-
T ss_pred EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC----------C-
Confidence 999999975321 125678899999999999987542 112589999997653210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCccccc-cc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVK-GM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWid-n~ 216 (1217)
....|+.||+..+.+.+..+ +++.+..+.|+.|..+...+...... ..
T Consensus 151 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~ 203 (281)
T 3zv4_A 151 ---------------------------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQS 203 (281)
T ss_dssp ---------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC-----
T ss_pred ---------------------------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccccccccc
Confidence 01359999999998887654 45889999999987764322110000 00
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
.........+... .....+...+|++++++.++.
T Consensus 204 ~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~fL~s 237 (281)
T 3zv4_A 204 ISSVPLADMLKSV---------LPIGRMPALEEYTGAYVFFAT 237 (281)
T ss_dssp ---CCHHHHHHHT---------CTTSSCCCGGGGSHHHHHHHS
T ss_pred ccchhHHHHHHhc---------CCCCCCCCHHHHHHHHHHhhc
Confidence 0000011111111 112346778999999888776
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.2e-05 Score=89.25 Aligned_cols=186 Identities=11% Similarity=0.044 Sum_probs=120.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh-hH--------------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD-AF--------------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~-vf--------------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~ 72 (1217)
.=+||+.+.-|....++|.+..... +. +.+.++......++.++.+|++++ ++++.+++
T Consensus 9 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~ 82 (274)
T 3e03_A 9 LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREE------DQVRAAVA 82 (274)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCH------HHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCH------HHHHHHHH
Confidence 3478888888888888888743221 11 111111111235688999999998 77776654
Q ss_pred -------CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccc
Q psy13944 73 -------DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEK 135 (1217)
Q Consensus 73 -------~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~ 135 (1217)
.+|++||+||.... . +.++..+++|+.|+..+++++... .+-.++|++||........
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----- 157 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW----- 157 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH-----
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----
Confidence 68999999997532 1 234578899999999999987542 2346899999976532100
Q ss_pred ccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCc
Q psy13944 136 FYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCP 210 (1217)
Q Consensus 136 ~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~p 210 (1217)
++ ....|+.||+..+.+.+..+ .++.+..+.|+.+..+.. .
T Consensus 158 -~~------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~---~ 203 (274)
T 3e03_A 158 -WG------------------------------AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA---I 203 (274)
T ss_dssp -HH------------------------------HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------
T ss_pred -CC------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch---h
Confidence 00 01359999999998886654 579999999984333210 0
Q ss_pred ccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 211 MWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 211 GWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.... ......+...+|+|++++.++...
T Consensus 204 --------------~~~~---------~~~~~~~~~pedvA~~v~~l~s~~ 231 (274)
T 3e03_A 204 --------------NMLP---------GVDAAACRRPEIMADAAHAVLTRE 231 (274)
T ss_dssp ---------------------------CCCGGGSBCTHHHHHHHHHHHTSC
T ss_pred --------------hhcc---------cccccccCCHHHHHHHHHHHhCcc
Confidence 0000 011223678999999998887643
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.00 E-value=8e-06 Score=85.60 Aligned_cols=113 Identities=12% Similarity=0.119 Sum_probs=80.5
Q ss_pred EEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-CCCcEEE
Q psy13944 553 VLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFI 621 (1217)
Q Consensus 553 ~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~-~~lk~fV 621 (1217)
.+.+|++++ ++++.+++ .+|+|||+||.... .+.+...+++|+.|+.++++.|... .+-.+||
T Consensus 38 ~~~~D~~~~------~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv 111 (202)
T 3d7l_A 38 DVTVDITNI------DSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFT 111 (202)
T ss_dssp SEECCTTCH------HHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEE
T ss_pred ceeeecCCH------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEE
Confidence 367899874 35666555 48999999995432 1334467889999999999999864 1125899
Q ss_pred EEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccccccc
Q psy13944 622 YVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCS 701 (1217)
Q Consensus 622 ~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~ 701 (1217)
++||.+++... + ....|+.||+..|.+++++. +++.
T Consensus 112 ~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~~~~~~~~~~~------~e~~ 147 (202)
T 3d7l_A 112 LTTGIMMEDPI----------V----------------------------QGASAAMANGAVTAFAKSAA------IEMP 147 (202)
T ss_dssp EECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHT------TSCS
T ss_pred EEcchhhcCCC----------C----------------------------ccHHHHHHHHHHHHHHHHHH------HHcc
Confidence 99997653220 0 01259999999999998764 2224
Q ss_pred CCCceeEeccCccc
Q psy13944 702 HDRGVRVCRNHPVG 715 (1217)
Q Consensus 702 ~~l~~~i~rp~~v~ 715 (1217)
.++.+.+++|..|.
T Consensus 148 ~gi~v~~v~pg~v~ 161 (202)
T 3d7l_A 148 RGIRINTVSPNVLE 161 (202)
T ss_dssp TTCEEEEEEECCBG
T ss_pred CCeEEEEEecCccC
Confidence 58889999998885
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.5e-05 Score=87.71 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=82.2
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH---
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE--- 612 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~--- 612 (1217)
++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 54 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 127 (260)
T 1nff_A 54 AARYVHLDVTQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPM 127 (260)
T ss_dssp GEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4888999999853 5555554 79999999996532 23455789999999976666553
Q ss_pred -hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 613 -EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 613 -~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+. +..++|++||..++... | ....|+.||+..|.+++++.
T Consensus 128 ~~~-~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 168 (260)
T 1nff_A 128 KEA-GRGSIINISSIEGLAGT----------V----------------------------ACHGYTATKFAVRGLTKSTA 168 (260)
T ss_dssp HHH-TCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHH
T ss_pred Hhc-CCCEEEEEeehhhcCCC----------C----------------------------CchhHHHHHHHHHHHHHHHH
Confidence 33 46799999998654320 0 01259999999999997754
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..++|..|.
T Consensus 169 ------~e~~~~gi~v~~v~Pg~v~ 187 (260)
T 1nff_A 169 ------LELGPSGIRVNSIHPGLVK 187 (260)
T ss_dssp ------HHHGGGTEEEEEEEECCBC
T ss_pred ------HHhCccCcEEEEEEeCCCC
Confidence 222 347888888998875
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.98 E-value=9.3e-06 Score=89.77 Aligned_cols=117 Identities=16% Similarity=0.086 Sum_probs=82.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 80 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 153 (272)
T 1yb1_A 80 AKVHTFVVDCSNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 153 (272)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEeeCCCHH------HHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46899999999853 4544443 78999999996532 2344578899999988887776531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||..++... + . ...|+.||+..|.+++++.
T Consensus 154 ~~~~~~~~iv~isS~~~~~~~----------~--~--------------------------~~~Y~~sK~a~~~l~~~la 195 (272)
T 1yb1_A 154 MTKNNHGHIVTVASAAGHVSV----------P--F--------------------------LLAYCSSKFAAVGFHKTLT 195 (272)
T ss_dssp HHHTTCEEEEEECCCC-CCCH----------H--H--------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEechhhcCCC----------C--C--------------------------chhHHHHHHHHHHHHHHHH
Confidence 256799999998765320 0 0 0249999999999998764
Q ss_pred ccccccccc----cCCCceeEeccCccc
Q psy13944 692 GCARSREKC----SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~----~~~l~~~i~rp~~v~ 715 (1217)
+.+ ..++.+..++|..|.
T Consensus 196 ------~e~~~~~~~gi~v~~v~Pg~v~ 217 (272)
T 1yb1_A 196 ------DELAALQITGVKTTCLCPNFVN 217 (272)
T ss_dssp ------HHHHHTTCTTEEEEEEEETHHH
T ss_pred ------HHHHHhCCCCeEEEEEeCCccc
Confidence 223 357888888887764
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.97 E-value=1e-05 Score=88.72 Aligned_cols=120 Identities=18% Similarity=0.184 Sum_probs=86.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 71 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 144 (274)
T 1ja9_A 71 AQGVAIQADISKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 144 (274)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999853 5555554 78999999996432 2334578899999999999998764
Q ss_pred --CCCcEEEEEccceee-cCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 --KNLDSFIYVSTAYSN-CNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~-g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
++ .+||++||..++ ... + ....|+.||+..|.+++++.
T Consensus 145 ~~~~-~~iv~~sS~~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~~~ 185 (274)
T 1ja9_A 145 CRRG-GRIILTSSIAAVMTGI----------P----------------------------NHALYAGSKAAVEGFCRAFA 185 (274)
T ss_dssp EEEE-EEEEEECCGGGTCCSC----------C----------------------------SCHHHHHHHHHHHHHHHHHH
T ss_pred HhhC-CEEEEEcChHhccCCC----------C----------------------------CCchHHHHHHHHHHHHHHHH
Confidence 12 589999998665 220 0 01259999999999998764
Q ss_pred ccccccccccCCCceeEeccCccchhh
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
++--..++.+.+++|..|...+
T Consensus 186 -----~e~~~~gi~v~~v~Pg~v~t~~ 207 (274)
T 1ja9_A 186 -----VDCGAKGVTVNCIAPGGVKTDM 207 (274)
T ss_dssp -----HHHGGGTCEEEEEEECCBSSHH
T ss_pred -----HHhhhcCeEEEEEeeCcccccc
Confidence 1112357888899998885433
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.4e-05 Score=85.82 Aligned_cols=116 Identities=12% Similarity=0.039 Sum_probs=78.3
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH----
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA---- 611 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA---- 611 (1217)
++.++.+|+++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 51 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 124 (234)
T 2ehd_A 51 GALPLPGDVREEG------DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL 124 (234)
T ss_dssp TCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5788999999853 444443 378999999996432 2345578899999998666554
Q ss_pred HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 612 EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 612 ~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
++. +..+||++||..++... + ....|+.||+..|.+++++.
T Consensus 125 ~~~-~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 165 (234)
T 2ehd_A 125 LRR-GGGTIVNVGSLAGKNPF----------K----------------------------GGAAYNASKFGLLGLAGAAM 165 (234)
T ss_dssp HTT-TCEEEEEECCTTTTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhC-CCcEEEEECCchhcCCC----------C----------------------------CCchhhHHHHHHHHHHHHHH
Confidence 333 56899999997654320 0 01259999999999987654
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. +-...++.+..++|.+|.
T Consensus 166 ~-----e~~~~gi~v~~v~Pg~v~ 184 (234)
T 2ehd_A 166 L-----DLREANVRVVNVLPGSVD 184 (234)
T ss_dssp H-----HHGGGTEEEEEEECC---
T ss_pred H-----HHhhcCcEEEEEEeCCCc
Confidence 1 112347888888888774
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=2.8e-05 Score=84.40 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=82.9
Q ss_pred cE-EEEEcccCCCCCCCCHHHHHHHh------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH---
Q psy13944 550 RI-VVLTADLQSDGLGLDEKAKEVLR------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE--- 612 (1217)
Q Consensus 550 kV-~~V~GDltd~~LGLs~~~~~~L~------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~--- 612 (1217)
++ .++.+|+++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 131 (254)
T 2wsb_A 58 AVAARIVADVTDAE------AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAM 131 (254)
T ss_dssp GEEEEEECCTTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cceeEEEEecCCHH------HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 46 88999999853 455444 478999999996532 23455788999999887777664
Q ss_pred -hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 613 -EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 613 -~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+. +..+||++||..++... |. .....|+.||+..|.+++++.
T Consensus 132 ~~~-~~~~iv~isS~~~~~~~----------~~--------------------------~~~~~Y~~sK~a~~~~~~~~~ 174 (254)
T 2wsb_A 132 VAR-GAGAIVNLGSMSGTIVN----------RP--------------------------QFASSYMASKGAVHQLTRALA 174 (254)
T ss_dssp HHH-TCEEEEEECCGGGTSCC----------SS--------------------------SCBHHHHHHHHHHHHHHHHHH
T ss_pred Hhc-CCcEEEEEecchhccCC----------CC--------------------------CcchHHHHHHHHHHHHHHHHH
Confidence 33 46799999998654321 10 001359999999999997764
Q ss_pred ccccccccccCCCceeEeccCccch
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+ +-...++.+.+++|..|.-
T Consensus 175 ~-----~~~~~gi~v~~v~Pg~v~t 194 (254)
T 2wsb_A 175 A-----EWAGRGVRVNALAPGYVAT 194 (254)
T ss_dssp H-----HHGGGTEEEEEEEECCBCS
T ss_pred H-----HHhhcCeEEEEEEecccCc
Confidence 1 1123478888999988853
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.6e-05 Score=86.33 Aligned_cols=118 Identities=13% Similarity=0.144 Sum_probs=83.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcc-cc---c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAAT-VK---F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~-v~---f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|++++ ++++.+++ ++|+|||+||. .. + .+.++..+++|+.|+.++++.+..
T Consensus 57 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (258)
T 3afn_B 57 GDAAFFAADLATS------EACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALP 130 (258)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4689999999985 35665555 79999999996 22 1 123557889999999999987753
Q ss_pred c--------CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHH
Q psy13944 614 M--------KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYI 685 (1217)
Q Consensus 614 ~--------~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~ 685 (1217)
. ....+||++||.+++.. +.| ....|+.||+..|.
T Consensus 131 ~~~~~~~~~~~~~~iv~~sS~~~~~~---------~~~----------------------------~~~~Y~~sK~a~~~ 173 (258)
T 3afn_B 131 HLAAAAKASGQTSAVISTGSIAGHTG---------GGP----------------------------GAGLYGAAKAFLHN 173 (258)
T ss_dssp HHHHHHHHHTSCEEEEEECCTHHHHC---------CCT----------------------------TCHHHHHHHHHHHH
T ss_pred HHHhcccCCCCCcEEEEecchhhccC---------CCC----------------------------CchHHHHHHHHHHH
Confidence 1 11268999999865431 000 01259999999999
Q ss_pred Hhhhhcccccccccc-cCCCceeEeccCccc
Q psy13944 686 ICLSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 686 lv~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++++. +.+ ..++.+.+++|..|.
T Consensus 174 ~~~~~~------~e~~~~gi~v~~v~Pg~v~ 198 (258)
T 3afn_B 174 VHKNWV------DFHTKDGVRFNIVSPGTVD 198 (258)
T ss_dssp HHHHHH------HHHGGGTEEEEEEEECSBS
T ss_pred HHHHHH------HhhcccCeEEEEEeCCCcc
Confidence 998764 222 347888889998874
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.96 E-value=2.7e-05 Score=84.32 Aligned_cols=118 Identities=13% Similarity=0.137 Sum_probs=84.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc----------hhcHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF----------DEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f----------~~~~~~~~~~NV~GT~nLLelA 611 (1217)
.++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 125 (250)
T 2cfc_A 52 DKVLRVRADVADEG------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAV 125 (250)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 46899999999853 5555544 78999999996432 1345578899999998877766
Q ss_pred Hhc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 612 EEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 612 ~~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
... .+..++|++||..++... | ....|+.||+..|.+++
T Consensus 126 ~~~~~~~~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~ 167 (250)
T 2cfc_A 126 LPHMLLQGAGVIVNIASVASLVAF----------P----------------------------GRSAYTTSKGAVLQLTK 167 (250)
T ss_dssp HHHHHHHTCEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEECChhhccCC----------C----------------------------CchhHHHHHHHHHHHHH
Confidence 431 146799999997654321 0 01259999999999998
Q ss_pred hhcccccccccccCCCceeEeccCccc
Q psy13944 689 SFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 689 ~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++. ++-...++.+.+++|..|.
T Consensus 168 ~l~-----~e~~~~gi~v~~v~Pg~v~ 189 (250)
T 2cfc_A 168 SVA-----VDYAGSGIRCNAVCPGMIE 189 (250)
T ss_dssp HHH-----HHHGGGTEEEEEEEECSBC
T ss_pred HHH-----HHhcccCeEEEEEEeCcCc
Confidence 764 1112347888889998875
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.5e-05 Score=87.74 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=46.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
.+++++.+|++|+ +++..+++++|+|||+|+... +.++.+++++|++.+++++||+
T Consensus 58 ~~v~~v~~Dl~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~ 113 (318)
T 2r6j_A 58 LGAIIVKGELDEH------EKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP 113 (318)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC
T ss_pred CCCEEEEecCCCH------HHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe
Confidence 3588999999984 478888899999999998643 5678999999999733899985
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.5e-05 Score=84.26 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=83.9
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---CC
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KN 616 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~~ 616 (1217)
+++++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 53 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 126 (244)
T 3d3w_A 53 GIEPVCVDLGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG 126 (244)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCH------HHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 356779999985 45666665 58999999996432 2345578999999999999888653 12
Q ss_pred -CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 617 -LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 617 -lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
..++|++||..++... + ....|+.||+..|.+++++.
T Consensus 127 ~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la---- 164 (244)
T 3d3w_A 127 VPGAIVNVSSQCSQRAV----------T----------------------------NHSVYCSTKGALDMLTKVMA---- 164 (244)
T ss_dssp CCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHH----
T ss_pred CCcEEEEeCchhhccCC----------C----------------------------CCchHHHHHHHHHHHHHHHH----
Confidence 5789999997654320 0 01259999999999998764
Q ss_pred ccccc-cCCCceeEeccCccc
Q psy13944 696 SREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 696 ~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+.+++|..|-
T Consensus 165 --~e~~~~~i~v~~v~Pg~v~ 183 (244)
T 3d3w_A 165 --LELGPHKIRVNAVNPTVVM 183 (244)
T ss_dssp --HHHGGGTEEEEEEEECCBT
T ss_pred --HHhcccCeEEEEEEecccc
Confidence 222 357888889998774
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=2e-05 Score=87.92 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=84.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 76 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 149 (302)
T 1w6u_A 76 NKVHAIQCDVRDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ 149 (302)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999853 4555543 46999999995432 2345578899999999998888642
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+..+||++||.+++... + ....|+.||+..|.+++++
T Consensus 150 ~~~~~~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l 191 (302)
T 1w6u_A 150 LIKAQKGAAFLSITTIYAETGS----------G----------------------------FVVPSASAKAGVEAMSKSL 191 (302)
T ss_dssp HHHTTCCEEEEEECCTHHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEcccccccCC----------C----------------------------CcchhHHHHHHHHHHHHHH
Confidence 245689999998654320 0 1125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+.+++|.+|.
T Consensus 192 a------~~~~~~gi~v~~v~Pg~v~ 211 (302)
T 1w6u_A 192 A------AEWGKYGMRFNVIQPGPIK 211 (302)
T ss_dssp H------HHHGGGTEEEEEEEECCBC
T ss_pred H------HHhhhcCcEEEEEeeccCC
Confidence 4 222 357888889998884
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=1.2e-05 Score=86.89 Aligned_cols=116 Identities=11% Similarity=0.076 Sum_probs=81.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE-- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~-- 612 (1217)
.++.++.+|++++ ++++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 57 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (248)
T 2pnf_A 57 VKAHGVEMNLLSE------ESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRK 130 (248)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHH
T ss_pred CceEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4688999999985 35555554 79999999996542 23455789999999977766553
Q ss_pred --hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 613 --EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 613 --~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+. +..+||++||..+.... | ....|+.||+..|.+++++
T Consensus 131 ~~~~-~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l 171 (248)
T 2pnf_A 131 MIKQ-RWGRIVNISSVVGFTGN----------V----------------------------GQVNYSTTKAGLIGFTKSL 171 (248)
T ss_dssp HHHH-TCEEEEEECCHHHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhc-CCcEEEEEccHHhcCCC----------C----------------------------CCchHHHHHHHHHHHHHHH
Confidence 33 56799999997543210 0 0125999999999999776
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ ..++.+.+++|..|.
T Consensus 172 a------~e~~~~~i~v~~v~Pg~v~ 191 (248)
T 2pnf_A 172 A------KELAPRNVLVNAVAPGFIE 191 (248)
T ss_dssp H------HHHGGGTEEEEEEEECSBC
T ss_pred H------HHhcccCeEEEEEEeceec
Confidence 4 222 346778888887774
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=97.95 E-value=3.3e-05 Score=85.96 Aligned_cols=55 Identities=20% Similarity=0.324 Sum_probs=45.7
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
+++++.+|++|+ +++..+++++|+|||+|+... +.++.+++++|++.+++++||+
T Consensus 56 ~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~ 110 (307)
T 2gas_A 56 GVILLEGDINDH------ETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP 110 (307)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC
T ss_pred CCEEEEeCCCCH------HHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee
Confidence 588999999984 468888899999999999654 5678899999998733899984
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.95 E-value=2.1e-05 Score=87.01 Aligned_cols=118 Identities=13% Similarity=0.151 Sum_probs=83.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHH----HHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKG----TEKLLKM 610 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~G----T~nLLel 610 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.| ++.+++.
T Consensus 83 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~ 156 (279)
T 1xg5_A 83 GTLIPYRCDLSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 156 (279)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999853 4555443 79999999996432 23455789999999 7777777
Q ss_pred HHhcCCC--cEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 611 AEEMKNL--DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 611 A~~~~~l--k~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
+++. +. .+||++||..++... +.+ ....|+.||+..|.+++
T Consensus 157 ~~~~-~~~~g~iv~isS~~~~~~~--------~~~----------------------------~~~~Y~~sK~a~~~~~~ 199 (279)
T 1xg5_A 157 MKER-NVDDGHIININSMSGHRVL--------PLS----------------------------VTHFYSATKYAVTALTE 199 (279)
T ss_dssp HHHT-TCCSCEEEEECCGGGTSCC--------SCG----------------------------GGHHHHHHHHHHHHHHH
T ss_pred HHhc-CCCCceEEEEcChhhcccC--------CCC----------------------------CCchhHHHHHHHHHHHH
Confidence 7765 43 699999998654320 000 00249999999999997
Q ss_pred hhcccccccccc---cCCCceeEeccCccc
Q psy13944 689 SFWGCARSREKC---SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 689 ~y~~~a~~~~~~---~~~l~~~i~rp~~v~ 715 (1217)
++. +.+ ..++.+..++|-.|.
T Consensus 200 ~la------~e~~~~~~~i~v~~v~Pg~v~ 223 (279)
T 1xg5_A 200 GLR------QELREAQTHIRATCISPGVVE 223 (279)
T ss_dssp HHH------HHHHHTTCCCEEEEEEESCBC
T ss_pred HHH------HHHhhcCCCeEEEEEecCccc
Confidence 754 222 457888888887774
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.94 E-value=1.5e-05 Score=85.63 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=84.0
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc------CccEEEEcCccccch-----------hcHHHHHHHHHHHHHHHHHHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE------DVNIVFHVAATVKFD-----------EHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~------~vdvVfH~AA~v~f~-----------~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
++.++.+|++++ ++++++++ .+|+|||+||..... +.++..+++|+.|+.+++++|.
T Consensus 40 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 113 (242)
T 1uay_A 40 DLIYVEGDVTRE------EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAA 113 (242)
T ss_dssp SSEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ceEEEeCCCCCH------HHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHH
Confidence 347889999985 35666655 789999999964321 1566889999999999999987
Q ss_pred hc-CC--------CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHH
Q psy13944 613 EM-KN--------LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAW 683 (1217)
Q Consensus 613 ~~-~~--------lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lA 683 (1217)
.. .. ..+||++||..++... + ....|+.||+..
T Consensus 114 ~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~ 155 (242)
T 1uay_A 114 WAMRENPPDAEGQRGVIVNTASVAAFEGQ----------I----------------------------GQAAYAASKGGV 155 (242)
T ss_dssp HHHTTCCCCTTSCSEEEEEECCTHHHHCC----------T----------------------------TCHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCeEEEEeCChhhccCC----------C----------------------------CCchhhHHHHHH
Confidence 53 11 1289999998765421 0 112599999999
Q ss_pred HHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 684 YIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 684 E~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
|.+++++. ++-...++.+.+++|..|-
T Consensus 156 ~~~~~~l~-----~e~~~~gi~v~~v~Pg~v~ 182 (242)
T 1uay_A 156 VALTLPAA-----RELAGWGIRVVTVAPGLFD 182 (242)
T ss_dssp HHHHHHHH-----HHHGGGTEEEEEEEECSCS
T ss_pred HHHHHHHH-----HHHhhcCcEEEEEEeccCc
Confidence 99997754 1112347888899998875
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.94 E-value=1.8e-05 Score=94.46 Aligned_cols=190 Identities=13% Similarity=0.067 Sum_probs=117.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------- 72 (1217)
.-+||+.+.-|....++|.+.....+ -+.+.+.... .++.++.+|++++ ++++.+++
T Consensus 216 ~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~--~~~~~~~~Dvtd~------~~v~~~~~~~~~~~g~ 287 (454)
T 3u0b_A 216 AVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADK--VGGTALTLDVTAD------DAVDKITAHVTEHHGG 287 (454)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH--HTCEEEECCTTST------THHHHHHHHHHHHSTT
T ss_pred EEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH--cCCeEEEEecCCH------HHHHHHHHHHHHHcCC
Confidence 34788888888999999887422211 1111111111 1467899999998 66665543
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|+|||+|+.... .+.++..+++|+.|+.++.+++... ....+||++||....... +
T Consensus 288 ~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~----------~-- 355 (454)
T 3u0b_A 288 KVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN----------R-- 355 (454)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC----------T--
T ss_pred CceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC----------C--
Confidence 39999999998632 1235578999999999999998753 245799999997543211 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHH----hc-CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVRE----KM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~----~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
.-..|+.||+..+.+.+. +. .++++..+.|+.|..+.....+...
T Consensus 356 --------------------------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---- 405 (454)
T 3u0b_A 356 --------------------------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT---- 405 (454)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--------------
T ss_pred --------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh----
Confidence 013599999965555544 43 6899999999988776432211100
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
...... . .....+...+|++++++.++...
T Consensus 406 --~~~~~~-~-----------~~l~r~g~pedvA~~v~fL~s~~ 435 (454)
T 3u0b_A 406 --REVGRR-L-----------NSLFQGGQPVDVAELIAYFASPA 435 (454)
T ss_dssp --CHHHHH-S-----------BTTSSCBCHHHHHHHHHHHHCGG
T ss_pred --HHHHHh-h-----------ccccCCCCHHHHHHHHHHHhCCc
Confidence 000000 0 01122457899999998877543
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.94 E-value=3.8e-05 Score=85.14 Aligned_cols=117 Identities=14% Similarity=0.130 Sum_probs=84.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 71 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 144 (281)
T 3s55_A 71 RRCISAKVDVKDRA------ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPG 144 (281)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999853 5555544 78999999996431 2445678899999999999987431
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...+... + ....|+.||+..|.+++++.
T Consensus 145 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la 186 (281)
T 3s55_A 145 MIKRNYGRIVTVSSMLGHSAN----------F----------------------------AQASYVSSKWGVIGLTKCAA 186 (281)
T ss_dssp HHHHTCEEEEEECCGGGGSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECChhhcCCC----------C----------------------------CCchhHHHHHHHHHHHHHHH
Confidence 145689999997654220 0 01259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|.+|-
T Consensus 187 ------~e~~~~gi~vn~v~PG~v~ 205 (281)
T 3s55_A 187 ------HDLVGYGITVNAVAPGNIE 205 (281)
T ss_dssp ------HHTGGGTEEEEEEEECSBC
T ss_pred ------HHHhhcCcEEEEEecCccc
Confidence 222 347888888898874
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.6e-05 Score=85.38 Aligned_cols=118 Identities=15% Similarity=0.125 Sum_probs=83.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-----------hhcHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-----------DEHFQTAFEINCKGTEKLLKM 610 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-----------~~~~~~~~~~NV~GT~nLLel 610 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.
T Consensus 53 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 126 (257)
T 3tpc_A 53 AAVRFRNADVTNEA------DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRL 126 (257)
T ss_dssp --CEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 35889999999853 5555554 78999999996531 245567899999999999999
Q ss_pred HHhc---------CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHH
Q psy13944 611 AEEM---------KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKN 681 (1217)
Q Consensus 611 A~~~---------~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~ 681 (1217)
+... ++..++|++||..++... + ....|+.||+
T Consensus 127 ~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKa 168 (257)
T 3tpc_A 127 AAEVMSQGEPDADGERGVIVNTASIAAFDGQ----------I----------------------------GQAAYAASKG 168 (257)
T ss_dssp HHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----------T----------------------------TCHHHHHHHH
T ss_pred HHHHHHhccccCCCCCeEEEEEechhhccCC----------C----------------------------CCcchHHHHH
Confidence 8753 134579999997654220 0 1125999999
Q ss_pred HHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 682 AWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 682 lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
..|.+++++. ++--..++.+..++|.+|.
T Consensus 169 a~~~~~~~la-----~e~~~~gi~vn~v~PG~v~ 197 (257)
T 3tpc_A 169 GVAALTLPAA-----RELARFGIRVVTIAPGIFD 197 (257)
T ss_dssp HHHHHHHHHH-----HHHGGGTEEEEEEEECCBS
T ss_pred HHHHHHHHHH-----HHHHHcCeEEEEEEeCCCC
Confidence 9999997754 1112347888888898874
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=1.7e-05 Score=86.63 Aligned_cols=117 Identities=17% Similarity=0.165 Sum_probs=84.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------------hhcHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------------DEHFQTAFEINCKGTEKLL 608 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------------~~~~~~~~~~NV~GT~nLL 608 (1217)
.++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.+++
T Consensus 58 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~ 131 (265)
T 2o23_A 58 NNCVFAPADVTSE------KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 131 (265)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred CceEEEEcCCCCH------HHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHH
Confidence 4689999999985 35555554 79999999996532 2345578899999999999
Q ss_pred HHHHhc---C------CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHH
Q psy13944 609 KMAEEM---K------NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLS 679 (1217)
Q Consensus 609 elA~~~---~------~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~S 679 (1217)
+.+... . +..+||++||..++... + ....|+.|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~~s 173 (265)
T 2o23_A 132 RLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ----------V----------------------------GQAAYSAS 173 (265)
T ss_dssp HHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----------T----------------------------TCHHHHHH
T ss_pred HHHHHHHHhcccccCCCCcEEEEeCChhhcCCC----------C----------------------------CCchhHHH
Confidence 998753 1 35689999998654321 0 01259999
Q ss_pred HHHHHHHhhhhcccccccccc-cCCCceeEeccCccc
Q psy13944 680 KNAWYIICLSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 680 K~lAE~lv~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
|+..|.+++++. ..+ ..++.+..++|.+|.
T Consensus 174 K~a~~~~~~~la------~e~~~~gi~v~~v~Pg~v~ 204 (265)
T 2o23_A 174 KGGIVGMTLPIA------RDLAPIGIRVMTIAPGLFG 204 (265)
T ss_dssp HHHHHHHHHHHH------HHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHH------HHHhhcCcEEEEEEecccc
Confidence 999999987654 222 347888888887774
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.93 E-value=2.5e-05 Score=85.22 Aligned_cols=124 Identities=13% Similarity=0.058 Sum_probs=84.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 64 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 137 (265)
T 1h5q_A 64 VKTKAYQCDVSNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL 137 (265)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHH
Confidence 46899999999853 4444433 48999999996432 2344578899999999999988643
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+...+||++||..++..... +. .+. .....|+.||+..|.+++++
T Consensus 138 ~~~~~~~~~iv~~sS~~~~~~~~~--~~---~~~--------------------------~~~~~Y~~sK~a~~~~~~~l 186 (265)
T 1h5q_A 138 WLQKQQKGSIVVTSSMSSQIINQS--SL---NGS--------------------------LTQVFYNSSKAACSNLVKGL 186 (265)
T ss_dssp HHHHTCCEEEEEECCGGGTSCCEE--ET---TEE--------------------------CSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEeCCchhhccccc--cc---ccc--------------------------ccccccHHHHHHHHHHHHHH
Confidence 22468999999765432110 00 000 00125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ ..++.+.+++|..|.
T Consensus 187 a------~e~~~~gi~v~~v~Pg~v~ 206 (265)
T 1h5q_A 187 A------AEWASAGIRVNALSPGYVN 206 (265)
T ss_dssp H------HHHGGGTEEEEEEEECSBC
T ss_pred H------HHHHhcCcEEEEEecCccc
Confidence 4 222 347888899998885
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.9e-05 Score=87.15 Aligned_cols=117 Identities=11% Similarity=0.102 Sum_probs=79.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc------h---hcHHHHHHHHHHH----HHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF------D---EHFQTAFEINCKG----TEKLL 608 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f------~---~~~~~~~~~NV~G----T~nLL 608 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... . +.++..+++|+.| +++++
T Consensus 83 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 156 (279)
T 3ctm_A 83 VHSKAYKCNISDPK------SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIG 156 (279)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CcceEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46889999999853 4555543 48999999996533 2 2334688999999 56777
Q ss_pred HHHHhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 609 KMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 609 elA~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
+.+++. +..+||++||..++... +.+ ....|+.||+..|.+++
T Consensus 157 ~~~~~~-~~~~iv~isS~~~~~~~--------~~~----------------------------~~~~Y~~sK~a~~~~~~ 199 (279)
T 3ctm_A 157 KIFKKN-GKGSLIITSSISGKIVN--------IPQ----------------------------LQAPYNTAKAACTHLAK 199 (279)
T ss_dssp HHHHHH-TCCEEEEECCCTTSCC-----------C----------------------------CHHHHHHHHHHHHHHHH
T ss_pred HHHHhc-CCCeEEEECchHhccCC--------CCC----------------------------CcccHHHHHHHHHHHHH
Confidence 777765 56799999997643210 000 01259999999999998
Q ss_pred hhcccccccccc-cCCCceeEeccCccc
Q psy13944 689 SFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 689 ~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
++. +++ ..+ .+..++|..|.
T Consensus 200 ~la------~e~~~~~-~v~~v~Pg~v~ 220 (279)
T 3ctm_A 200 SLA------IEWAPFA-RVNTISPGYID 220 (279)
T ss_dssp HHH------HHTTTTC-EEEEEEECSBS
T ss_pred HHH------HHhcccC-CEEEEeccCCc
Confidence 764 222 234 66777787764
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.93 E-value=9.6e-06 Score=88.32 Aligned_cols=113 Identities=11% Similarity=0.127 Sum_probs=72.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc----------chhcHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK----------FDEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~----------f~~~~~~~~~~NV~GT~nLLelA 611 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||... -.+.++..+++|+.|+.++++.+
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 131 (253)
T 3qiv_A 58 GTAISVAVDVSDPE------SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAV 131 (253)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 46899999999853 4555544 7899999999631 12345578999999976666655
Q ss_pred H----hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 612 E----EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 612 ~----~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
. +. +..++|++||..++.. ...|+.||+..|.++
T Consensus 132 ~~~~~~~-~~g~iv~isS~~~~~~-----------------------------------------~~~Y~asK~a~~~~~ 169 (253)
T 3qiv_A 132 YKKMTKR-GGGAIVNQSSTAAWLY-----------------------------------------SNYYGLAKVGINGLT 169 (253)
T ss_dssp HHHHHHH-TCEEEEEECC----------------------------------------------------CCHHHHHHHH
T ss_pred HHHHHhc-CCCEEEEECCccccCC-----------------------------------------CchhHHHHHHHHHHH
Confidence 3 33 4568999999865421 024999999999999
Q ss_pred hhhcccccccccc-cCCCceeEeccCccc
Q psy13944 688 LSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 688 ~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++. +++ ..++.+..++|.+|-
T Consensus 170 ~~la------~e~~~~gi~v~~v~PG~v~ 192 (253)
T 3qiv_A 170 QQLS------RELGGRNIRINAIAPGPID 192 (253)
T ss_dssp HHHH------HHTTTTTEEEEEEEC----
T ss_pred HHHH------HHHhhcCeEEEEEEecCCc
Confidence 8764 222 346778888887774
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.92 E-value=1.3e-05 Score=88.80 Aligned_cols=126 Identities=13% Similarity=0.082 Sum_probs=86.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-----hhcHHHHHHHHHHHHHHHHHHHHhc-C
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-----DEHFQTAFEINCKGTEKLLKMAEEM-K 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-----~~~~~~~~~~NV~GT~nLLelA~~~-~ 615 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 71 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 144 (287)
T 3pxx_A 71 RKAYTAEVDVRDRA------AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT 144 (287)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh
Confidence 57999999999853 4555543 78999999997543 2456688999999999999999764 2
Q ss_pred CCcEEEEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 616 NLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
+-.++|++||...+.... +..|.. +. .....|+.||+..|.+++++.
T Consensus 145 ~~g~iv~isS~~~~~~~~~~~~~~~~---~~--------------------------~~~~~Y~asK~a~~~~~~~la-- 193 (287)
T 3pxx_A 145 SGASIITTGSVAGLIAAAQPPGAGGP---QG--------------------------PGGAGYSYAKQLVDSYTLQLA-- 193 (287)
T ss_dssp TTCEEEEECCHHHHHHHHCCC--------CH--------------------------HHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCcEEEEeccchhccccccccccccc---CC--------------------------CccchHHHHHHHHHHHHHHHH--
Confidence 335899999976543211 111110 00 000259999999999998764
Q ss_pred ccccccc-cCCCceeEeccCccc
Q psy13944 694 ARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 694 a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..++|-+|.
T Consensus 194 ----~e~~~~gi~vn~v~PG~v~ 212 (287)
T 3pxx_A 194 ----AQLAPQSIRANVIHPTNVN 212 (287)
T ss_dssp ----HHHGGGTCEEEEEEESSBS
T ss_pred ----HHHhhcCcEEEEEecCccc
Confidence 233 347888888998875
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.92 E-value=3.8e-05 Score=85.54 Aligned_cols=190 Identities=16% Similarity=0.111 Sum_probs=107.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
.-+||+.+.-|....++|.+.....+ .+...++. .....++.++.+|++++. +.++.++
T Consensus 15 vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~-----~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 15 AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPI-----ATMSSLADFIKTHF 89 (311)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCH-----HHHHHHHHHHHHHH
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcH-----HHHHHHHHHHHHhC
Confidence 44899999999999999987322100 11111111 112357999999999861 3333332
Q ss_pred CCccEEEEcCccCCcc-------------------------------------cCHHHHHHHHHHHHHHHHHHhHhc---
Q psy13944 72 EDVNIVFHVAATVKFD-------------------------------------EHFQTAFEINCKGTEKLLKMAEEM--- 111 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f~-------------------------------------e~l~~a~~vNV~GT~~LLelAk~~--- 111 (1217)
..+|+|||+||..... +.++..+++|+.|+..+++++...
T Consensus 90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~ 169 (311)
T 3o26_A 90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL 169 (311)
T ss_dssp SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence 4789999999976321 123467899999999988887531
Q ss_pred CCCCeEEEEcCccccccccc---ccccccC-CCCChHHHHHHhhcCCcccccccccccCCCCC---ChHHHHHHHHHHHH
Q psy13944 112 KNLDSFIYVSTAYSNCNIKK---IEEKFYE-PLYTHIEMEQIINSCSHTELTVLNDILIKPMP---NTYTLSKNACEQMV 184 (1217)
Q Consensus 112 ~~lk~fV~vSTa~v~g~~~~---I~E~~y~-~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~P---NtYa~SK~~AE~lv 184 (1217)
.+..++|++||......... ..+.... .................+..+.. .-...+| ..|+.||+..+.+.
T Consensus 170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Y~~SK~a~~~~~ 247 (311)
T 3o26_A 170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENL--IETNGWPSFGAAYTTSKACLNAYT 247 (311)
T ss_dssp SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTC--TTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccc--cccccCcccchhhHHHHHHHHHHH
Confidence 24469999999765432110 0000000 00111111111110000000000 0012333 46999999999999
Q ss_pred HHhc---CCCCEEEEecceeccC
Q psy13944 185 REKM---DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 185 ~~~~---~gLPvvIvRPsiV~G~ 204 (1217)
+.++ .++.+..+.||.|..+
T Consensus 248 ~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 248 RVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp HHHHHHCTTSEEEEECCCSBCSG
T ss_pred HHHHhhcCCceEEEecCCceecC
Confidence 8766 5678888888877654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=3e-05 Score=85.63 Aligned_cols=121 Identities=12% Similarity=-0.006 Sum_probs=83.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccch------------------hcHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKFD------------------EHFQTAFEINCKG 603 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f~------------------~~~~~~~~~NV~G 603 (1217)
.++.++.+|++++.- ..++++.+++ .+|+|||+||..... +.++..+++|+.|
T Consensus 62 ~~~~~~~~Dl~~~~~--~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 139 (276)
T 1mxh_A 62 GSAVLCKGDLSLSSS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVA 139 (276)
T ss_dssp TCEEEEECCCSSSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHH
T ss_pred CceEEEeccCCCccc--cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHH
Confidence 468899999998610 0024444443 789999999964321 4556789999999
Q ss_pred HHHHHHHHHhc--CCC------cEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCCh
Q psy13944 604 TEKLLKMAEEM--KNL------DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNT 675 (1217)
Q Consensus 604 T~nLLelA~~~--~~l------k~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNt 675 (1217)
+.++++.+... .+. .++|++||..++.. .| ....
T Consensus 140 ~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~ 181 (276)
T 1mxh_A 140 PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP----------LP----------------------------GFCV 181 (276)
T ss_dssp HHHHHHHHHHTC-------CCCEEEEEECCGGGGSC----------CT----------------------------TCHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCC----------CC----------------------------CCee
Confidence 99999999863 123 68999999765432 00 0125
Q ss_pred hHHHHHHHHHHhhhhcccccccccc-cCCCceeEeccCccc
Q psy13944 676 YTLSKNAWYIICLSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 676 Yt~SK~lAE~lv~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
|+.||+..|.+++++. .++ ..++.+..++|..|.
T Consensus 182 Y~asK~a~~~l~~~la------~e~~~~gi~v~~v~PG~v~ 216 (276)
T 1mxh_A 182 YTMAKHALGGLTRAAA------LELAPRHIRVNAVAPGLSL 216 (276)
T ss_dssp HHHHHHHHHHHHHHHH------HHHGGGTEEEEEEEESSBS
T ss_pred hHHHHHHHHHHHHHHH------HHHhhcCeEEEEEecCccc
Confidence 9999999999997754 222 346788888887774
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=3.2e-05 Score=84.83 Aligned_cols=118 Identities=14% Similarity=0.147 Sum_probs=85.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 130 (263)
T 3ai3_A 57 VRVLEVAVDVATPE------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG 130 (263)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 36889999999853 5555554 78999999996532 2345578899999999999888531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||..++... | ....|+.||+..|.+++++.
T Consensus 131 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 172 (263)
T 3ai3_A 131 MRARGGGAIIHNASICAVQPL----------W----------------------------YEPIYNVTKAALMMFSKTLA 172 (263)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECchhhcCCC----------C----------------------------CcchHHHHHHHHHHHHHHHH
Confidence 245799999998765421 0 01259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccch
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
.++ ..++.+..++|..|--
T Consensus 173 ------~e~~~~gi~v~~v~Pg~v~t 192 (263)
T 3ai3_A 173 ------TEVIKDNIRVNCINPGLILT 192 (263)
T ss_dssp ------HHHGGGTEEEEEEEECCBCC
T ss_pred ------HHhhhcCcEEEEEecCcccC
Confidence 222 3578888899988753
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=97.90 E-value=4.3e-05 Score=84.23 Aligned_cols=117 Identities=11% Similarity=0.070 Sum_probs=83.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 46 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 119 (264)
T 2dtx_A 46 AKYDHIECDVTNPD------QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 119 (264)
T ss_dssp CSSEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35788999999853 4555544 68999999996432 2345578999999999999988642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||..++... + ....|+.||+..|.+++++.
T Consensus 120 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 161 (264)
T 2dtx_A 120 MIRSRDPSIVNISSVQASIIT----------K----------------------------NASAYVTSKHAVIGLTKSIA 161 (264)
T ss_dssp HTTSSSCEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCchhccCC----------C----------------------------CchhHHHHHHHHHHHHHHHH
Confidence 235699999997654320 0 01259999999999998764
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
..++..+.+..++|..|.
T Consensus 162 ------~e~~~~i~vn~v~PG~v~ 179 (264)
T 2dtx_A 162 ------LDYAPLLRCNAVCPATID 179 (264)
T ss_dssp ------HHHTTTSEEEEEEECSBC
T ss_pred ------HHhcCCcEEEEEEeCCCc
Confidence 334444777788888774
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=4.6e-05 Score=83.10 Aligned_cols=118 Identities=11% Similarity=0.075 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (261)
T 1gee_A 57 GEAIAVKGDVTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130 (261)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46889999999853 4555544 78999999996532 2345578899999999998887642
Q ss_pred ---CC-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+ ..+||++||...... .| ....|+.||+..|.+++++
T Consensus 131 ~~~~~~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 172 (261)
T 1gee_A 131 FVENDIKGTVINMSSVHEKIP----------WP----------------------------LFVHYAASKGGMKLMTETL 172 (261)
T ss_dssp HHHTTCCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCEEEEeCCHHhcCC----------CC----------------------------CccHHHHHHHHHHHHHHHH
Confidence 12 469999999754321 00 0125999999999998775
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++-...++.+.+++|..|.
T Consensus 173 a-----~e~~~~gi~v~~v~Pg~v~ 192 (261)
T 1gee_A 173 A-----LEYAPKGIRVNNIGPGAIN 192 (261)
T ss_dssp H-----HHHGGGTCEEEEEEECSBC
T ss_pred H-----HHhcccCeEEEEEeeCCcC
Confidence 4 1112347888899998875
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.89 E-value=3.4e-05 Score=85.29 Aligned_cols=116 Identities=19% Similarity=0.174 Sum_probs=84.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc---------hhcHHHHHHHHHHHHHHHHHHH-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF---------DEHFQTAFEINCKGTEKLLKMA- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f---------~~~~~~~~~~NV~GT~nLLelA- 611 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 130 (271)
T 3tzq_B 57 RGAVHHVVDLTNEV------SVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAI 130 (271)
T ss_dssp TTCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45788999999853 5555554 78999999997522 2344578999999999999998
Q ss_pred ---HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 612 ---EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 612 ---~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
++. +..++|++||..++... + ....|+.||+..|.+++
T Consensus 131 ~~m~~~-~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~ 171 (271)
T 3tzq_B 131 PRLISA-GGGAIVNISSATAHAAY----------D----------------------------MSTAYACTKAAIETLTR 171 (271)
T ss_dssp HHHHHT-TCEEEEEECCGGGTSBC----------S----------------------------SCHHHHHHHHHHHHHHH
T ss_pred HHHHhc-CCCEEEEECCHHHcCCC----------C----------------------------CChHHHHHHHHHHHHHH
Confidence 443 45799999997654220 0 11259999999999998
Q ss_pred hhcccccccccc-cCCCceeEeccCccc
Q psy13944 689 SFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 689 ~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
++. ..+ ..++.+..++|..|-
T Consensus 172 ~la------~e~~~~gi~vn~v~PG~v~ 193 (271)
T 3tzq_B 172 YVA------TQYGRHGVRCNAIAPGLVR 193 (271)
T ss_dssp HHH------HHHGGGTEEEEEEEECCBC
T ss_pred HHH------HHHhhcCEEEEEEEeCCCc
Confidence 764 222 346778888888774
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.89 E-value=2.5e-05 Score=86.00 Aligned_cols=119 Identities=13% Similarity=0.095 Sum_probs=84.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 133 (262)
T 3pk0_A 60 GKVIGVQTDVSDRA------QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA 133 (262)
T ss_dssp SCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 47999999999853 5555543 78999999996431 2345578899999999999988753
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...... +.| ....|+.||+..|.+++++.
T Consensus 134 m~~~~~g~iv~isS~~~~~~---------~~~----------------------------~~~~Y~asK~a~~~l~~~la 176 (262)
T 3pk0_A 134 LIASGSGRVVLTSSITGPIT---------GYP----------------------------GWSHYGATKAAQLGFMRTAA 176 (262)
T ss_dssp HHHHSSCEEEEECCSBTTTB---------CCT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEechhhccC---------CCC----------------------------CChhhHHHHHHHHHHHHHHH
Confidence 14568999999753210 000 01259999999999998764
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+..++|.+|.
T Consensus 177 -----~e~~~~gi~vn~v~PG~v~ 195 (262)
T 3pk0_A 177 -----IELAPHKITVNAIMPGNIM 195 (262)
T ss_dssp -----HHHGGGTCEEEEEEECSBC
T ss_pred -----HHHHhhCcEEEEEEeCcCc
Confidence 1112347888888998874
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.8e-05 Score=87.58 Aligned_cols=117 Identities=18% Similarity=0.256 Sum_probs=85.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||...+ .+.++..+++|+.|+.++++.+
T Consensus 59 ~~~~~~~~Dvtd~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~ 132 (324)
T 3u9l_A 59 VDLRTLELDVQSQV------SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPH 132 (324)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999853 5555554 79999999996431 2344578899999999999998
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..++|++||....... .| ....|+.||+..|.++.++
T Consensus 133 m~~~-~~g~iV~isS~~~~~~~---------~~----------------------------~~~~Y~asKaa~~~~~~~l 174 (324)
T 3u9l_A 133 MRRQ-KHGLLIWISSSSSAGGT---------PP----------------------------YLAPYFAAKAAMDAIAVQY 174 (324)
T ss_dssp HHHH-TCEEEEEECCGGGTSCC---------CS----------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHhc-CCCEEEEEecchhccCC---------CC----------------------------cchhHHHHHHHHHHHHHHH
Confidence 443 56789999997654220 00 1125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+.+++|..|.
T Consensus 175 a------~el~~~gI~v~~v~PG~v~ 194 (324)
T 3u9l_A 175 A------RELSRWGIETSIIVPGAFT 194 (324)
T ss_dssp H------HHHHTTTEEEEEEEECCC-
T ss_pred H------HHhhhhCcEEEEEECCccc
Confidence 4 223 347888889998874
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.8e-05 Score=85.12 Aligned_cols=119 Identities=11% Similarity=0.110 Sum_probs=85.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 53 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 126 (258)
T 3a28_C 53 QKAVFVGLDVTDKA------NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRK 126 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 46899999999853 4555543 78999999996532 2345578999999999999988752
Q ss_pred ---CCC-cEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KNL-DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+. .++|++||..++.. .| ....|+.||+..|.+++++
T Consensus 127 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 168 (258)
T 3a28_C 127 FDELGVKGKIINAASIAAIQG----------FP----------------------------ILSAYSTTKFAVRGLTQAA 168 (258)
T ss_dssp HHHHTCCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEECcchhccC----------CC----------------------------CchhHHHHHHHHHHHHHHH
Confidence 134 68999999765321 00 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccchh
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
. .++ ..++.+..++|.+|.-.
T Consensus 169 a------~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 169 A------QELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp H------HHHGGGTCEEEEEEECCBCSH
T ss_pred H------HHHHhhCeEEEEEECCccCCh
Confidence 4 222 34788888899888533
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=3.3e-05 Score=84.05 Aligned_cols=116 Identities=11% Similarity=0.104 Sum_probs=84.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+
T Consensus 54 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 127 (246)
T 3osu_A 54 VDSFAIQANVADAD------EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQ 127 (246)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999853 5555554 78999999996531 2345578999999999999998
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..++|++||..+... .| ....|+.||+..|.+++++
T Consensus 128 ~~~~-~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 168 (246)
T 3osu_A 128 MLRQ-RSGAIINLSSVVGAVG----------NP----------------------------GQANYVATKAGVIGLTKSA 168 (246)
T ss_dssp HHHH-TCEEEEEECCHHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHc-CCCEEEEEcchhhcCC----------CC----------------------------CChHHHHHHHHHHHHHHHH
Confidence 333 4568999999754321 00 0125999999999999776
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ ..++.+..++|.+|.
T Consensus 169 a------~e~~~~gi~vn~v~PG~v~ 188 (246)
T 3osu_A 169 A------RELASRGITVNAVAPGFIV 188 (246)
T ss_dssp H------HHHGGGTEEEEEEEECSBG
T ss_pred H------HHhcccCeEEEEEEECCCc
Confidence 4 222 446788888887774
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.88 E-value=3.1e-05 Score=84.89 Aligned_cols=117 Identities=13% Similarity=0.136 Sum_probs=84.3
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 59 ~~~~~~~D~~d~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 132 (263)
T 3ak4_A 59 GGFAVEVDVTKR------ASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHF 132 (263)
T ss_dssp CCEEEECCTTCH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 578899999985 35555554 79999999996432 1345578899999999999988642
Q ss_pred --CC-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 --KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 --~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+ ..++|++||..++.. .| ....|+.||+..|.+++++.
T Consensus 133 ~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la 174 (263)
T 3ak4_A 133 LASNTKGVIVNTASLAAKVG----------AP----------------------------LLAHYSASKFAVFGWTQALA 174 (263)
T ss_dssp HHTTCCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCeEEEEecccccccC----------CC----------------------------CchhHHHHHHHHHHHHHHHH
Confidence 12 468999999764321 00 01259999999999997764
Q ss_pred ccccccccc-cCCCceeEeccCccch
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
..+ ..++.+..++|..|.-
T Consensus 175 ------~e~~~~gi~v~~v~Pg~v~t 194 (263)
T 3ak4_A 175 ------REMAPKNIRVNCVCPGFVKT 194 (263)
T ss_dssp ------HHHGGGTCEEEEEEECSBTT
T ss_pred ------HHHhHcCeEEEEEecccccC
Confidence 222 3478888999988853
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=2e-05 Score=85.98 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=85.4
Q ss_pred CcEEEEEcccCCC-CCCCCHHHHHHHh-------cCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhc-C-C--
Q psy13944 549 ERIVVLTADLQSD-GLGLDEKAKEVLR-------EDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEM-K-N-- 616 (1217)
Q Consensus 549 ~kV~~V~GDltd~-~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~-~-~-- 616 (1217)
.++.++.+|++++ + +++.++ .++|+|||+||... .+.++..+++|+.|+.++++.+... . +
T Consensus 55 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 127 (254)
T 1sby_A 55 VNITFHTYDVTVPVA------ESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKG 127 (254)
T ss_dssp SEEEEEECCTTSCHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred ceEEEEEEecCCChH------HHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcC
Confidence 4689999999986 3 333333 37899999999754 4567789999999999999998742 1 1
Q ss_pred --CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccc
Q psy13944 617 --LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCA 694 (1217)
Q Consensus 617 --lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a 694 (1217)
-.++|++||..++... | ....|+.||+..|.+++++.
T Consensus 128 ~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la--- 166 (254)
T 1sby_A 128 GPGGIIANICSVTGFNAI----------H----------------------------QVPVYSASKAAVVSFTNSLA--- 166 (254)
T ss_dssp CCCEEEEEECCGGGTSCC----------T----------------------------TSHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCEEEEECchhhccCC----------C----------------------------CchHHHHHHHHHHHHHHHHH---
Confidence 2479999998654320 0 01259999999999997764
Q ss_pred ccccccc-CCCceeEeccCccchh
Q psy13944 695 RSREKCS-HDRGVRVCRNHPVGET 717 (1217)
Q Consensus 695 ~~~~~~~-~~l~~~i~rp~~v~e~ 717 (1217)
+.++ .++.+..++|..|.-.
T Consensus 167 ---~~~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1sby_A 167 ---KLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp ---HHHHHHSEEEEEEEECSEESH
T ss_pred ---HHhccCCeEEEEEecCCccCc
Confidence 1222 5788888899888533
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.88 E-value=4.4e-05 Score=84.37 Aligned_cols=116 Identities=16% Similarity=0.135 Sum_probs=82.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc-----------chhcHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK-----------FDEHFQTAFEINCKGTEKLLKM 610 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~-----------f~~~~~~~~~~NV~GT~nLLel 610 (1217)
.++.++.+|+++++ +++.+++ ++|+|||+||... -.+.++..+++|+.|+.++++.
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 131 (278)
T 1spx_A 58 QNVNSVVADVTTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKK 131 (278)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceeEEecccCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 46899999999853 5555554 7999999999643 2233457889999999999998
Q ss_pred HHhc---CCCcEEEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHH
Q psy13944 611 AEEM---KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYII 686 (1217)
Q Consensus 611 A~~~---~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~l 686 (1217)
+... .+ .++|++||..+ +.. .| ....|+.||+..|.+
T Consensus 132 ~~~~~~~~~-g~iv~isS~~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~ 172 (278)
T 1spx_A 132 AVPHLSSTK-GEIVNISSIASGLHA----------TP----------------------------DFPYYSIAKAAIDQY 172 (278)
T ss_dssp HHHHHHHHT-CEEEEECCTTSSSSC----------CT----------------------------TSHHHHHHHHHHHHH
T ss_pred HHHHHhhcC-CeEEEEecccccccC----------CC----------------------------CccHHHHHHHHHHHH
Confidence 8753 13 68999999765 321 00 012599999999999
Q ss_pred hhhhcccccccccc-cCCCceeEeccCccc
Q psy13944 687 CLSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 687 v~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
++++. ..+ ..++.+..++|.+|.
T Consensus 173 ~~~la------~e~~~~gi~v~~v~Pg~v~ 196 (278)
T 1spx_A 173 TRNTA------IDLIQHGIRVNSISPGLVA 196 (278)
T ss_dssp HHHHH------HHHGGGTCEEEEEEECCBC
T ss_pred HHHHH------HHHHhcCcEEEEEecCccc
Confidence 97754 222 357888889998874
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=5.3e-05 Score=84.16 Aligned_cols=120 Identities=17% Similarity=0.161 Sum_probs=86.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 79 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 152 (283)
T 1g0o_A 79 SDAACVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 152 (283)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999853 444443 368999999996542 2445678999999999999999864
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
.+..++|++||....... + .....|+.||+..|.+++++.
T Consensus 153 ~~~~g~iv~isS~~~~~~~----------~---------------------------~~~~~Y~asK~a~~~~~~~la-- 193 (283)
T 1g0o_A 153 LEIGGRLILMGSITGQAKA----------V---------------------------PKHAVYSGSKGAIETFARCMA-- 193 (283)
T ss_dssp SCTTCEEEEECCGGGTCSS----------C---------------------------SSCHHHHHHHHHHHHHHHHHH--
T ss_pred HhcCCeEEEEechhhccCC----------C---------------------------CCCcchHHHHHHHHHHHHHHH--
Confidence 345699999997543210 0 001259999999999997754
Q ss_pred ccccccc-cCCCceeEeccCccchh
Q psy13944 694 ARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 694 a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
..+ ..++.+..++|..|.-.
T Consensus 194 ----~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 194 ----IDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp ----HHHGGGTCEEEEEEECCBSSH
T ss_pred ----HHhcccCeEEEEEecCcccch
Confidence 222 35788888999888543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.88 E-value=4e-05 Score=83.29 Aligned_cols=118 Identities=14% Similarity=0.140 Sum_probs=84.2
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHH---hcCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---CC
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVL---REDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KN 616 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L---~~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~~ 616 (1217)
++.++.+|+++++ +++.+ ...+|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 51 ~~~~~~~D~~~~~------~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 124 (246)
T 2ag5_A 51 GIQTRVLDVTKKK------QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK 124 (246)
T ss_dssp TEEEEECCTTCHH------HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEeeCCCHH------HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6889999999853 44444 3478999999996542 2345578899999999999987631 24
Q ss_pred CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccc
Q psy13944 617 LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARS 696 (1217)
Q Consensus 617 lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~ 696 (1217)
..++|++||..++... +. ....|+.||+..|.+++++.
T Consensus 125 ~g~iv~isS~~~~~~~--------~~-----------------------------~~~~Y~~sK~a~~~~~~~la----- 162 (246)
T 2ag5_A 125 SGNIINMSSVASSVKG--------VV-----------------------------NRCVYSTTKAAVIGLTKSVA----- 162 (246)
T ss_dssp CEEEEEECCSBTTTBC--------CT-----------------------------TBHHHHHHHHHHHHHHHHHH-----
T ss_pred CceEEEEechHhCcCC--------CC-----------------------------CCccHHHHHHHHHHHHHHHH-----
Confidence 5799999997653220 00 01259999999999997754
Q ss_pred cccc-cCCCceeEeccCccch
Q psy13944 697 REKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 697 ~~~~-~~~l~~~i~rp~~v~e 716 (1217)
+.+ ..++.+..++|..|..
T Consensus 163 -~e~~~~gi~v~~v~Pg~v~t 182 (246)
T 2ag5_A 163 -ADFIQQGIRCNCVCPGTVDT 182 (246)
T ss_dssp -HHHGGGTEEEEEEEESCEEC
T ss_pred -HHhhhcCcEEEEEeeCcCcC
Confidence 222 3478888999988853
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=2.6e-05 Score=85.37 Aligned_cols=117 Identities=16% Similarity=0.121 Sum_probs=83.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||... + .+.++..+++|+.|+.++++.+..
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 136 (260)
T 2zat_A 63 LSVTGTVCHVGKAE------DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVP 136 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 36889999999853 4555443 7999999999642 1 233557889999999999988753
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..++|++||..++... | ....|+.||+..|.+++++
T Consensus 137 ~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l 178 (260)
T 2zat_A 137 EMEKRGGGSVLIVSSVGAYHPF----------P----------------------------NLGPYNVSKTALLGLTKNL 178 (260)
T ss_dssp HHHHTTCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEechhhcCCC----------C----------------------------CchhHHHHHHHHHHHHHHH
Confidence 1 256799999998665320 0 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+..++|..|.
T Consensus 179 a------~e~~~~gi~v~~v~Pg~v~ 198 (260)
T 2zat_A 179 A------VELAPRNIRVNCLAPGLIK 198 (260)
T ss_dssp H------HHHGGGTEEEEEEEECSBC
T ss_pred H------HHhcccCeEEEEEEECccc
Confidence 4 222 346777888887774
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.87 E-value=2.9e-05 Score=85.93 Aligned_cols=117 Identities=16% Similarity=0.148 Sum_probs=84.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh--------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR--------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~--------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 70 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 143 (273)
T 1ae1_A 70 LNVEGSVCDLLSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 143 (273)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999853 455544 578999999996432 234557889999999999998842
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..++|++||..++... | ....|+.||+..|.+++++
T Consensus 144 ~m~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~l 185 (273)
T 1ae1_A 144 LLKASQNGNVIFLSSIAGFSAL----------P----------------------------SVSLYSASKGAINQMTKSL 185 (273)
T ss_dssp HHHHHTSEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEcCHhhcCCC----------C----------------------------CcchhHHHHHHHHHHHHHH
Confidence 1 145799999998765321 0 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+..++|..|.
T Consensus 186 a------~e~~~~gi~v~~v~Pg~v~ 205 (273)
T 1ae1_A 186 A------CEWAKDNIRVNSVAPGVIL 205 (273)
T ss_dssp H------HHHGGGTEEEEEEEECSBC
T ss_pred H------HHHhhcCcEEEEEEeCCCc
Confidence 4 222 347888888898875
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=97.87 E-value=6.4e-05 Score=84.43 Aligned_cols=56 Identities=9% Similarity=0.211 Sum_probs=46.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
.+++++.+|++|+ +++..+++++|+|||+|+... +.++.+++++|++.+++++||+
T Consensus 56 ~~v~~v~~D~~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 56 MGVTIIEGEMEEH------EKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC
T ss_pred CCcEEEEecCCCH------HHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEec
Confidence 3588999999984 478888899999999999643 6788999999998733899983
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.1e-05 Score=88.41 Aligned_cols=153 Identities=14% Similarity=0.129 Sum_probs=103.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------- 71 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------- 71 (1217)
.-+||+.+.-|....++|.+.....+ .+.+.++......++.++.+|++++ ++++.++
T Consensus 8 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 8 CVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQE------SEVRSLFEQVDREQQ 81 (260)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSH------HHHHHHHHHHHHHHT
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCH------HHHHHHHHHHHHhcC
Confidence 34788888889999999887432110 1111111111134688999999997 6665543
Q ss_pred CCccEEEEcCc--cC--------Cc----ccCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccc
Q psy13944 72 EDVNIVFHVAA--TV--------KF----DEHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEE 134 (1217)
Q Consensus 72 ~~VDiViH~AA--~v--------~f----~e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E 134 (1217)
..+|++||+|+ .. .+ .+.++..+++|+.|+..+.+.+.. + .+..++|++||...+..
T Consensus 82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 155 (260)
T 2qq5_A 82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY------ 155 (260)
T ss_dssp TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC------
T ss_pred CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC------
Confidence 45799999994 21 11 123567888999999887776642 1 24569999999765321
Q ss_pred cccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 135 KFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 135 ~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
.+ ...|+.||+..|.+.+.++ .++.+.+++|+.|..+.
T Consensus 156 ----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 ----MF-----------------------------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp ----CS-----------------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred ----CC-----------------------------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 00 1369999999999887654 58999999999987764
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=97.86 E-value=3.4e-05 Score=83.06 Aligned_cols=116 Identities=14% Similarity=0.134 Sum_probs=78.8
Q ss_pred cEEE-EEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHH----H
Q psy13944 550 RIVV-LTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLK----M 610 (1217)
Q Consensus 550 kV~~-V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLe----l 610 (1217)
++.. +.+|+++++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++ .
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 125 (245)
T 2ph3_A 52 PLVAVLGANLLEAE------AATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKL 125 (245)
T ss_dssp SCEEEEECCTTSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEeccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 4556 899999853 454443 379999999996532 23455788999999555554 4
Q ss_pred HHhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 611 AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 611 A~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++. +..+||++||..+.... | ....|+.||+..|.+++++
T Consensus 126 ~~~~-~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l 166 (245)
T 2ph3_A 126 MMKA-RFGRIVNITSVVGILGN----------P----------------------------GQANYVASKAGLIGFTRAV 166 (245)
T ss_dssp HHHH-TCEEEEEECCTHHHHCC----------S----------------------------SBHHHHHHHHHHHHHHHHH
T ss_pred HHhc-CCCEEEEEeChhhccCC----------C----------------------------CCcchHHHHHHHHHHHHHH
Confidence 4444 56899999997543210 0 0125999999999999775
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++-...++.+.+++|..|.
T Consensus 167 a-----~e~~~~gi~v~~v~Pg~v~ 186 (245)
T 2ph3_A 167 A-----KEYAQRGITVNAVAPGFIE 186 (245)
T ss_dssp H-----HHHGGGTEEEEEEEECSBC
T ss_pred H-----HHHHHcCeEEEEEEEEeec
Confidence 4 1112347888889998875
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.86 E-value=3.8e-05 Score=84.16 Aligned_cols=117 Identities=12% Similarity=0.061 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 55 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~ 128 (257)
T 3imf_A 55 GQILTVQMDVRNTD------DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKY 128 (257)
T ss_dssp TCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999853 4555543 68999999995321 234557899999999999998842
Q ss_pred ---cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 ---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
..+..++|++||....... | ....|+.||+..+.+++++
T Consensus 129 ~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~l 170 (257)
T 3imf_A 129 WIEKGIKGNIINMVATYAWDAG----------P----------------------------GVIHSAAAKAGVLAMTKTL 170 (257)
T ss_dssp HHHHTCCCEEEEECCGGGGSCC----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCcEEEEECchhhccCC----------C----------------------------CcHHHHHHHHHHHHHHHHH
Confidence 1235689999997654220 0 0125999999999999775
Q ss_pred ccccccccccc--CCCceeEeccCccc
Q psy13944 691 WGCARSREKCS--HDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~--~~l~~~i~rp~~v~ 715 (1217)
. .+++ .++.+..++|-+|.
T Consensus 171 a------~e~~~~~gIrvn~v~PG~v~ 191 (257)
T 3imf_A 171 A------VEWGRKYGIRVNAIAPGPIE 191 (257)
T ss_dssp H------HHHHHHHCCEEEEEEECCBS
T ss_pred H------HHhccccCeEEEEEEECCCc
Confidence 4 2332 37888888888774
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.85 E-value=2.4e-05 Score=87.10 Aligned_cols=118 Identities=12% Similarity=0.085 Sum_probs=83.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 93 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (285)
T 2c07_A 93 YESSGYAGDVSKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR 166 (285)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CceeEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999853 455554 368999999996532 2345578899999988888877531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..+||++||..++... | ....|+.||+..|.+++++.
T Consensus 167 ~~~~~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la 208 (285)
T 2c07_A 167 MINNRYGRIINISSIVGLTGN----------V----------------------------GQANYSSSKAGVIGFTKSLA 208 (285)
T ss_dssp HHHHTCEEEEEECCTHHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEECChhhccCC----------C----------------------------CCchHHHHHHHHHHHHHHHH
Confidence 146799999997543210 0 01259999999999997764
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++-...++.+.+++|..|.
T Consensus 209 -----~e~~~~gi~v~~v~Pg~v~ 227 (285)
T 2c07_A 209 -----KELASRNITVNAIAPGFIS 227 (285)
T ss_dssp -----HHHGGGTEEEEEEEECSBC
T ss_pred -----HHHHHhCcEEEEEEeCcEe
Confidence 1112347888888998874
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.6e-05 Score=83.32 Aligned_cols=184 Identities=12% Similarity=0.083 Sum_probs=117.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCc-ccCCCeEEEEccC--CCCCCCCCHHHHHHhcC-----
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENA-NFTERIVVLTADL--QSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p-~~~~kI~~V~GDl--~d~~LGLs~edl~~L~~----- 72 (1217)
=+||+.+.-|....++|.+..... -.+.+.++.. ....++.++.+|+ +++ ++++.+++
T Consensus 18 lITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~------~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 18 LVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATA------QQYRELAARVEHE 91 (247)
T ss_dssp EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCH------HHHHHHHHHHHHH
T ss_pred EEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCH------HHHHHHHHHHHHh
Confidence 478999889999999998743211 0111111111 1125677888887 665 66665543
Q ss_pred --CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 --DVNIVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 --~VDiViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|+|||+||.... . +.++..+++|+.|+.++++.+... .+..++|++||.......
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 161 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR---------- 161 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC----------
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC----------
Confidence 78999999997532 1 235578999999999999988421 345689999997653211
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc------CCCCEEEEecceeccCCCCCCcccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM------DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~------~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
+ ....|+.||+..|.+.+.++ .++.+..+.|+.|-.+.
T Consensus 162 ~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~-------- 205 (247)
T 3i1j_A 162 A----------------------------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM-------- 205 (247)
T ss_dssp T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH--------
T ss_pred C----------------------------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc--------
Confidence 0 01369999999998887654 36778888887664431
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
...... ......+...+|++++++.++....
T Consensus 206 ---------~~~~~~---------~~~~~~~~~p~dva~~~~~l~s~~~ 236 (247)
T 3i1j_A 206 ---------RAQAYP---------DENPLNNPAPEDIMPVYLYLMGPDS 236 (247)
T ss_dssp ---------HHHHST---------TSCGGGSCCGGGGTHHHHHHHSGGG
T ss_pred ---------chhccc---------ccCccCCCCHHHHHHHHHHHhCchh
Confidence 111111 1122345678999999888775433
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.5e-05 Score=84.52 Aligned_cols=117 Identities=13% Similarity=0.114 Sum_probs=83.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 61 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 134 (256)
T 3gaf_A 61 GKAIGLECNVTDEQ------HREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHM 134 (256)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 56899999999853 4555543 78999999996432 2345578999999999999988531
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||..++.. .| ....|+.||+..|.+++++.
T Consensus 135 ~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~la- 175 (256)
T 3gaf_A 135 QKAGGGAILNISSMAGENT----------NV----------------------------RMASYGSSKAAVNHLTRNIA- 175 (256)
T ss_dssp HHTTCEEEEEECCGGGTCC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred HhcCCcEEEEEcCHHHcCC----------CC----------------------------CchHHHHHHHHHHHHHHHHH-
Confidence 24568999999765321 00 01259999999999998764
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|-+|.
T Consensus 176 -----~e~~~~gi~vn~v~PG~v~ 194 (256)
T 3gaf_A 176 -----FDVGPMGIRVNAIAPGAIK 194 (256)
T ss_dssp -----HHHGGGTEEEEEEEECCBC
T ss_pred -----HHHhhhCcEEEEEEEcccc
Confidence 222 346777788887775
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.2e-05 Score=87.11 Aligned_cols=117 Identities=17% Similarity=0.146 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||... + .+.++..+++|+.|+.++++.+..
T Consensus 63 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 136 (281)
T 3svt_A 63 GAIRYEPTDITNED------ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAR 136 (281)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 37899999999853 4555543 6799999999621 1 233457889999999999998865
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+-.+||++||..++... .....|+.||+..|.+++++
T Consensus 137 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asK~a~~~l~~~l 178 (281)
T 3svt_A 137 EMVRGGGGSFVGISSIAASNTH--------------------------------------RWFGAYGVTKSAVDHLMQLA 178 (281)
T ss_dssp HHHHTTCEEEEEECCHHHHSCC--------------------------------------TTCTHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEeCHHHcCCC--------------------------------------CCChhHHHHHHHHHHHHHHH
Confidence 3 123489999997654320 01136999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. .++ ..++.+..++|..|.
T Consensus 179 a------~e~~~~gi~vn~v~PG~v~ 198 (281)
T 3svt_A 179 A------DELGASWVRVNSIRPGLIR 198 (281)
T ss_dssp H------HHHGGGTEEEEEEEECSBC
T ss_pred H------HHhhhcCeEEEEEEeCcCc
Confidence 4 222 356777788887774
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.2e-05 Score=86.25 Aligned_cols=118 Identities=16% Similarity=0.093 Sum_probs=83.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||... + .+.++..+++|+.|+.++++.+..
T Consensus 78 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 151 (262)
T 3rkr_A 78 GEAESHACDLSHSD------AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAP 151 (262)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46899999999853 4554443 5899999999621 1 234557889999999999988754
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..+||++||..++.. .+ ....|+.||+..|.+++++
T Consensus 152 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~l 193 (262)
T 3rkr_A 152 AMIAAKRGHIINISSLAGKNP----------VA----------------------------DGAAYTASKWGLNGLMTSA 193 (262)
T ss_dssp HHHHTTCCEEEEECSSCSSCC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCceEEEEechhhcCC----------CC----------------------------CCchHHHHHHHHHHHHHHH
Confidence 1 24568999999765421 00 0125999999999999876
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++-...++.+..++|..|.
T Consensus 194 a-----~e~~~~gi~v~~v~PG~v~ 213 (262)
T 3rkr_A 194 A-----EELRQHQVRVSLVAPGSVR 213 (262)
T ss_dssp H-----HHHGGGTCEEEEEEECCC-
T ss_pred H-----HHhhhcCcEEEEEecCCCc
Confidence 4 1112357888888888875
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.83 E-value=6.7e-05 Score=83.52 Aligned_cols=56 Identities=9% Similarity=0.235 Sum_probs=46.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
.+++++.+|++|+ +++..+++++|+|||+|+... +.++.+++++|++.+++++||+
T Consensus 56 ~~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~ 111 (308)
T 1qyc_A 56 SGANIVHGSIDDH------ASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP 111 (308)
T ss_dssp TTCEEECCCTTCH------HHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC
T ss_pred CCCEEEEeccCCH------HHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee
Confidence 3588999999984 468888889999999999643 5678899999999833899984
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.83 E-value=3.1e-05 Score=84.04 Aligned_cols=117 Identities=16% Similarity=0.128 Sum_probs=80.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---C
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---K 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~ 615 (1217)
.++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 60 ~~~~~~~~D~~~~------~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 133 (249)
T 3f9i_A 60 DNYTIEVCNLANK------EECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK 133 (249)
T ss_dssp SSEEEEECCTTSH------HHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEcCCCCH------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4688999999985 35666654 68999999996532 2455678999999999999887532 2
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
+..+||++||..++... | ....|+.||+..|.+++++.
T Consensus 134 ~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la---- 171 (249)
T 3f9i_A 134 RYGRIINISSIVGIAGN----------P----------------------------GQANYCASKAGLIGMTKSLS---- 171 (249)
T ss_dssp TCEEEEEECCCCC--CC----------S----------------------------CSHHHHHHHHHHHHHHHHHH----
T ss_pred CCcEEEEEccHHhccCC----------C----------------------------CCchhHHHHHHHHHHHHHHH----
Confidence 45689999997654321 1 01259999999999997764
Q ss_pred ccccc-cCCCceeEeccCccc
Q psy13944 696 SREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 696 ~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|..|.
T Consensus 172 --~e~~~~gi~v~~v~PG~v~ 190 (249)
T 3f9i_A 172 --YEVATRGITVNAVAPGFIK 190 (249)
T ss_dssp --HHHGGGTEEEEEEEECCBC
T ss_pred --HHHHHcCcEEEEEecCccc
Confidence 222 346777788887774
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.4e-05 Score=94.39 Aligned_cols=154 Identities=14% Similarity=0.140 Sum_probs=112.1
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcChh------------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADDA------------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE- 72 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~v------------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~- 72 (1217)
|..-+||..+.-|....++|.+.....+ .+.+.++....-.++.++.+|++++ ++++.+++
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~------~~v~~~~~~ 313 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADR------EALAALLAE 313 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHT
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCH------HHHHHHHHH
Confidence 4455899998889999999887433211 1122222222335789999999998 77777664
Q ss_pred -----CccEEEEcCccC-Cc---c----cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 -----DVNIVFHVAATV-KF---D----EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 -----~VDiViH~AA~v-~f---~----e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|+|||+||.. .. . +.++..+++|+.|+.++.+++... .+.+||++||.......
T Consensus 314 i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~a~~~g~---------- 382 (496)
T 3mje_A 314 LPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSGAAVWGS---------- 382 (496)
T ss_dssp CCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTTC----------
T ss_pred HHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeChHhcCCC----------
Confidence 479999999986 21 1 234578999999999999999884 77899999996542210
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~ 204 (1217)
+ .-..|+.+|+..+.+.++.. .|++++.+.|+.+.++
T Consensus 383 ~----------------------------g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~ 420 (496)
T 3mje_A 383 G----------------------------GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEV 420 (496)
T ss_dssp T----------------------------TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSS
T ss_pred C----------------------------CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCC
Confidence 0 01359999999999988776 8999999999987654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=97.83 E-value=5.7e-05 Score=82.55 Aligned_cols=116 Identities=15% Similarity=0.054 Sum_probs=83.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHH---
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMA--- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA--- 611 (1217)
.++.++.+|++++ ++++.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+
T Consensus 51 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 124 (255)
T 2q2v_A 51 VKAVHHPADLSDV------AQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG 124 (255)
T ss_dssp CCEEEECCCTTSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4688999999985 35666655 79999999996432 2345578999999888877665
Q ss_pred -HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 -EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 -~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++. +..++|++||..++... | ....|+.||+..|.+++++
T Consensus 125 ~~~~-~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l 165 (255)
T 2q2v_A 125 MRAR-NWGRIINIASVHGLVGS----------T----------------------------GKAAYVAAKHGVVGLTKVV 165 (255)
T ss_dssp HHHT-TCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHc-CCcEEEEEcCchhccCC----------C----------------------------CchhHHHHHHHHHHHHHHH
Confidence 343 56799999998654320 0 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ ..++.+..++|..|.
T Consensus 166 a------~e~~~~gi~v~~v~Pg~v~ 185 (255)
T 2q2v_A 166 G------LETATSNVTCNAICPGWVL 185 (255)
T ss_dssp H------HHTTTSSEEEEEEEESSBC
T ss_pred H------HHhcccCcEEEEEeeCCCc
Confidence 4 222 357888888998875
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.3e-05 Score=86.99 Aligned_cols=119 Identities=15% Similarity=0.073 Sum_probs=84.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 71 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 144 (277)
T 2rhc_B 71 VEADGRTCDVRSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144 (277)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhCh
Confidence 46889999999853 4555543 68999999996432 2345578899999999999998753
Q ss_pred -----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 615 -----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 615 -----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.+..+||++||...... .+ ....|+.||+..|.++++
T Consensus 145 ~~m~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~ 186 (277)
T 2rhc_B 145 GGMLERGTGRIVNIASTGGKQG----------VV----------------------------HAAPYSASKHGVVGFTKA 186 (277)
T ss_dssp TCHHHHTEEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHH
T ss_pred hhHhhcCCeEEEEECccccccC----------CC----------------------------CCccHHHHHHHHHHHHHH
Confidence 13468999999754321 00 012599999999999977
Q ss_pred hcccccccccc-cCCCceeEeccCccchh
Q psy13944 690 FWGCARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 690 y~~~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
+. ..+ ..++.+..++|..|...
T Consensus 187 la------~e~~~~gi~v~~v~PG~v~t~ 209 (277)
T 2rhc_B 187 LG------LELARTGITVNAVCPGFVETP 209 (277)
T ss_dssp HH------HHHTTTEEEEEEEEECSBCSH
T ss_pred HH------HHHHHhCcEEEEEecCcCcCc
Confidence 54 222 34677888899887533
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.83 E-value=5.7e-05 Score=82.38 Aligned_cols=114 Identities=14% Similarity=0.177 Sum_probs=82.6
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH----
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE---- 612 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~---- 612 (1217)
+.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 48 ~~~~~~D~~d~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 121 (250)
T 2fwm_X 48 FATEVMDVADA------AQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFR 121 (250)
T ss_dssp SEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 67889999985 35555554 78999999996432 23456789999999999999883
Q ss_pred hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 613 EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 613 ~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
+. +..++|++||..++.. .| ....|+.||+..|.+++++.
T Consensus 122 ~~-~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la- 161 (250)
T 2fwm_X 122 RQ-RGGAIVTVASDAAHTP----------RI----------------------------GMSAYGASKAALKSLALSVG- 161 (250)
T ss_dssp HH-TCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred hc-CCCEEEEECchhhCCC----------CC----------------------------CCchHHHHHHHHHHHHHHHH-
Confidence 33 4579999999765421 00 11259999999999997754
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+..++|.+|.
T Consensus 162 -----~e~~~~gi~v~~v~Pg~v~ 180 (250)
T 2fwm_X 162 -----LELAGSGVRCNVVSPGSTD 180 (250)
T ss_dssp -----HHHGGGTCEEEEEEECCC-
T ss_pred -----HHhCccCCEEEEEECCccc
Confidence 222 347888889998875
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.9e-05 Score=86.41 Aligned_cols=150 Identities=13% Similarity=0.070 Sum_probs=98.3
Q ss_pred cccCCCCCCcccHHHHHHHH--hcChh---------HHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 9 GHNGAKTCKHNSILWVAKDF--FADDA---------FDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~--l~~~v---------fd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
-+||+.+.-|....++|.+. -...+ .+.+.++... ...++.++.+|++++ ++++.+++
T Consensus 10 lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~ 83 (259)
T 1oaa_A 10 VLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE------AGVQRLLSAVR 83 (259)
T ss_dssp EESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH------HHHHHHHHHHH
T ss_pred EEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCH------HHHHHHHHHHH
Confidence 47888888888888888761 11111 1111111100 024688999999997 66665442
Q ss_pred ------Ccc--EEEEcCccCC-----cc-----cCHHHHHHHHHHHHHHHHHHhHhc-C----CCCeEEEEcCccccccc
Q psy13944 73 ------DVN--IVFHVAATVK-----FD-----EHFQTAFEINCKGTEKLLKMAEEM-K----NLDSFIYVSTAYSNCNI 129 (1217)
Q Consensus 73 ------~VD--iViH~AA~v~-----f~-----e~l~~a~~vNV~GT~~LLelAk~~-~----~lk~fV~vSTa~v~g~~ 129 (1217)
.+| ++||+||... +. +.++..+++|+.|+.++++++... . +..++|++||...+...
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 163 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY 163 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence 457 9999999742 21 235578999999999999998652 1 12469999998654210
Q ss_pred ccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceec
Q psy13944 130 KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVM 202 (1217)
Q Consensus 130 ~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~ 202 (1217)
+ ....|+.||+..|.+.+..+ .++.+..+.|+.|-
T Consensus 164 ----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 164 ----------K----------------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp ----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred ----------C----------------------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence 0 01369999999999988765 34666667776553
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.82 E-value=4.4e-05 Score=83.57 Aligned_cols=115 Identities=14% Similarity=0.125 Sum_probs=81.3
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---
Q psy13944 552 VVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM--- 614 (1217)
Q Consensus 552 ~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~--- 614 (1217)
.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 52 ~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~ 125 (256)
T 2d1y_A 52 AFFQVDLEDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK 125 (256)
T ss_dssp EEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 78899999853 4554443 68999999996532 2345578999999999999988642
Q ss_pred CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccc
Q psy13944 615 KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCA 694 (1217)
Q Consensus 615 ~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a 694 (1217)
.+..++|++||...... .| ....|+.||+..|.+++++.
T Consensus 126 ~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la--- 164 (256)
T 2d1y_A 126 VGGGAIVNVASVQGLFA----------EQ----------------------------ENAAYNASKGGLVNLTRSLA--- 164 (256)
T ss_dssp TTCEEEEEECCGGGTSB----------CT----------------------------TBHHHHHHHHHHHHHHHHHH---
T ss_pred cCCcEEEEEccccccCC----------CC----------------------------CChhHHHHHHHHHHHHHHHH---
Confidence 24679999999754321 00 01259999999999997764
Q ss_pred cccccc-cCCCceeEeccCccch
Q psy13944 695 RSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 695 ~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
..+ ..++.+..++|..|..
T Consensus 165 ---~e~~~~gi~v~~v~Pg~v~t 184 (256)
T 2d1y_A 165 ---LDLAPLRIRVNAVAPGAIAT 184 (256)
T ss_dssp ---HHHGGGTEEEEEEEECSBCC
T ss_pred ---HHHhhcCeEEEEEeeCCccC
Confidence 222 3467777888887753
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.81 E-value=5.6e-05 Score=84.93 Aligned_cols=119 Identities=14% Similarity=0.055 Sum_probs=84.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE-- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~-- 612 (1217)
.++.++.+|+++++ +++.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 91 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 164 (293)
T 3rih_A 91 GNVIGVRLDVSDPG------SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAP 164 (293)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHH
T ss_pred CcEEEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 47899999999853 444443 367999999996432 23455789999999999999884
Q ss_pred --hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 613 --EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 613 --~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+. +..++|++||...... +.| ....|+.||+..|.+++++
T Consensus 165 m~~~-~~g~iV~isS~~~~~~---------~~~----------------------------~~~~Y~asKaa~~~l~~~l 206 (293)
T 3rih_A 165 LTAS-GRGRVILTSSITGPVT---------GYP----------------------------GWSHYGASKAAQLGFMRTA 206 (293)
T ss_dssp HHHH-SSCEEEEECCSBTTTB---------BCT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHc-CCCEEEEEeChhhccC---------CCC----------------------------CCHHHHHHHHHHHHHHHHH
Confidence 33 4579999999754210 000 0125999999999999876
Q ss_pred cccccccccccCCCceeEeccCccch
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
. ++--..++.+..++|..|.-
T Consensus 207 a-----~e~~~~gI~vn~v~PG~v~t 227 (293)
T 3rih_A 207 A-----IELAPRGVTVNAILPGNILT 227 (293)
T ss_dssp H-----HHHGGGTCEEEEEEECSBCC
T ss_pred H-----HHHhhhCeEEEEEecCCCcC
Confidence 4 11123478888889988753
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.80 E-value=5.8e-05 Score=83.27 Aligned_cols=118 Identities=14% Similarity=0.118 Sum_probs=84.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 76 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 149 (272)
T 4e3z_A 76 GEAVAIPGDVGNAA------DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR 149 (272)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 56899999999853 4555543 68999999997543 234457899999999999988865
Q ss_pred c-C-----CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 614 M-K-----NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 614 ~-~-----~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
. . +..+||++||..+.... + .....|+.||+..|.++
T Consensus 150 ~~~~~~~~~~g~iv~isS~~~~~~~----------~---------------------------~~~~~Y~asKaa~~~~~ 192 (272)
T 4e3z_A 150 RMSRLYSGQGGAIVNVSSMAAILGS----------A---------------------------TQYVDYAASKAAIDTFT 192 (272)
T ss_dssp HHCGGGTCCCEEEEEECCTHHHHCC----------T---------------------------TTCHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCEEEEEcchHhccCC----------C---------------------------CCcchhHHHHHHHHHHH
Confidence 3 1 24579999997653210 0 00124999999999999
Q ss_pred hhhcccccccccc-cCCCceeEeccCccc
Q psy13944 688 LSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 688 ~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++. +++ ..++.+..++|..|.
T Consensus 193 ~~la------~e~~~~gi~v~~v~PG~v~ 215 (272)
T 4e3z_A 193 IGLA------REVAAEGIRVNAVRPGIIE 215 (272)
T ss_dssp HHHH------HHHGGGTEEEEEEEECSBC
T ss_pred HHHH------HHHHHcCcEEEEEecCCCc
Confidence 8764 222 347888888998875
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=97.80 E-value=4.2e-05 Score=83.88 Aligned_cols=117 Identities=17% Similarity=0.156 Sum_probs=84.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (259)
T 4e6p_A 54 PAAYAVQMDVTRQD------SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQ 127 (259)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45889999999853 5555554 78999999996432 2445578899999999999988643
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+.-.++|++||..++.. .| ....|+.||+..|.+++++
T Consensus 128 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~l 169 (259)
T 4e6p_A 128 MIAQGRGGKIINMASQAGRRG----------EA----------------------------LVAIYCATKAAVISLTQSA 169 (259)
T ss_dssp HHHHTSCEEEEEECCGGGTSC----------CT----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEECChhhccC----------CC----------------------------CChHHHHHHHHHHHHHHHH
Confidence 11348999999765422 01 0125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. .++ ..++.+..++|..|-
T Consensus 170 a------~e~~~~gi~vn~v~PG~v~ 189 (259)
T 4e6p_A 170 G------LDLIKHRINVNAIAPGVVD 189 (259)
T ss_dssp H------HHHGGGTEEEEEEEECCBC
T ss_pred H------HHhhhcCCEEEEEEECCCc
Confidence 4 222 347888888898774
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.80 E-value=6.1e-05 Score=81.53 Aligned_cols=119 Identities=17% Similarity=0.109 Sum_probs=82.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+.+...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 127 (251)
T 1zk4_A 54 DQIQFFQHDSSDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127 (251)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46899999999853 4555543 58999999996432 2344578899999988877665421
Q ss_pred ---CCC-cEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KNL-DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+. .+||++||..++... | ....|+.||+..|.+++++
T Consensus 128 ~~~~~~~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~~ 169 (251)
T 1zk4_A 128 MKNKGLGASIINMSSIEGFVGD----------P----------------------------SLGAYNASKGAVRIMSKSA 169 (251)
T ss_dssp HTTSSSCEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEeCCchhccCC----------C----------------------------CCccchHHHHHHHHHHHHH
Confidence 134 689999998654321 0 0125999999999999775
Q ss_pred cccccccccc--cCCCceeEeccCccch
Q psy13944 691 WGCARSREKC--SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~--~~~l~~~i~rp~~v~e 716 (1217)
. ++.. ..++.+..++|..|..
T Consensus 170 a-----~e~~~~~~~i~v~~v~Pg~v~t 192 (251)
T 1zk4_A 170 A-----LDCALKDYDVRVNTVHPGYIKT 192 (251)
T ss_dssp H-----HHHHHTTCSEEEEEEEECCBCC
T ss_pred H-----HHhcccCCCeEEEEEeeCcCcc
Confidence 4 1111 4578888889988753
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.79 E-value=7.9e-05 Score=81.56 Aligned_cols=119 Identities=13% Similarity=0.141 Sum_probs=83.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcc--c---cc----hhcHHHHHHHHHHHHHHHHHHH-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAAT--V---KF----DEHFQTAFEINCKGTEKLLKMA- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~--v---~f----~~~~~~~~~~NV~GT~nLLelA- 611 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||. . .+ .+.++..+++|+.|+.++++.+
T Consensus 57 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 130 (264)
T 3i4f_A 57 ERLQFVQADVTKKE------DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVV 130 (264)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHH
Confidence 57999999999853 5555544 78999999993 1 11 2345578999999999999998
Q ss_pred ---HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 612 ---EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 612 ---~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
++. +..++|++||..+.+.. +. .....|+.||+..|.+++
T Consensus 131 ~~~~~~-~~g~iv~iss~~~~~~~--------~~----------------------------~~~~~Y~asKaa~~~~~~ 173 (264)
T 3i4f_A 131 PVMRKQ-NFGRIINYGFQGADSAP--------GW----------------------------IYRSAFAAAKVGLVSLTK 173 (264)
T ss_dssp HHHHHH-TCEEEEEECCTTGGGCC--------CC----------------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhc-CCCeEEEEeechhcccC--------CC----------------------------CCCchhHHHHHHHHHHHH
Confidence 443 45789999987443210 00 011259999999999997
Q ss_pred hhcccccccccccCCCceeEeccCccc
Q psy13944 689 SFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 689 ~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++. ++-...++.+..++|..|.
T Consensus 174 ~la-----~e~~~~gi~v~~v~PG~v~ 195 (264)
T 3i4f_A 174 TVA-----YEEAEYGITANMVCPGDII 195 (264)
T ss_dssp HHH-----HHHGGGTEEEEEEEECCCC
T ss_pred HHH-----HHhhhcCcEEEEEccCCcc
Confidence 764 1122357888888898775
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.78 E-value=9.5e-05 Score=79.70 Aligned_cols=65 Identities=11% Similarity=0.157 Sum_probs=51.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.+|++|+ ++++.+++++|+|||+|+...+. .++.+++++|++. ++++||++||..+
T Consensus 67 ~~~~~~~~Dl~d~------~~~~~~~~~~D~vv~~a~~~~~~-----------~~~~~~~~~~~~~-~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 67 TNSQIIMGDVLNH------AALKQAMQGQDIVYANLTGEDLD-----------IQANSVIAAMKAC-DVKRLIFVLSLGI 128 (236)
T ss_dssp TTEEEEECCTTCH------HHHHHHHTTCSEEEEECCSTTHH-----------HHHHHHHHHHHHT-TCCEEEEECCCCC
T ss_pred CCcEEEEecCCCH------HHHHHHhcCCCEEEEcCCCCchh-----------HHHHHHHHHHHHc-CCCEEEEEeccee
Confidence 4689999999984 57888889999999999864322 3577899999987 7889999999988
Q ss_pred ecC
Q psy13944 629 NCN 631 (1217)
Q Consensus 629 ~g~ 631 (1217)
++.
T Consensus 129 ~~~ 131 (236)
T 3qvo_A 129 YDE 131 (236)
T ss_dssp ---
T ss_pred cCC
Confidence 875
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.77 E-value=6e-05 Score=84.08 Aligned_cols=118 Identities=16% Similarity=0.151 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMA-- 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA-- 611 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+
T Consensus 77 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 150 (283)
T 3v8b_A 77 GQAIALEADVSDEL------QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVP 150 (283)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57899999999853 4555443 78999999996432 2345578999999999999998
Q ss_pred --HhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 612 --EEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 612 --~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
++. +..++|++||....... +.| ....|+.||+..|.++++
T Consensus 151 ~m~~~-~~g~Iv~isS~~~~~~~--------~~~----------------------------~~~~Y~asKaa~~~l~~~ 193 (283)
T 3v8b_A 151 YLKQR-GGGAIVVVSSINGTRTF--------TTP----------------------------GATAYTATKAAQVAIVQQ 193 (283)
T ss_dssp HHHHH-TCEEEEEECCSBTTTBC--------CST----------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHc-CCceEEEEcChhhccCC--------CCC----------------------------CchHHHHHHHHHHHHHHH
Confidence 333 45689999997543210 000 112599999999999987
Q ss_pred hcccccccccc-cCCCceeEeccCccc
Q psy13944 690 FWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+. .++ ..++.+..++|-+|.
T Consensus 194 la------~e~~~~gI~vn~v~PG~v~ 214 (283)
T 3v8b_A 194 LA------LELGKHHIRVNAVCPGAIE 214 (283)
T ss_dssp HH------HHTTTTTEEEEEEEECSBS
T ss_pred HH------HHhCccCcEEEEEEeCCCc
Confidence 64 223 346777788887774
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.77 E-value=4e-05 Score=83.78 Aligned_cols=118 Identities=15% Similarity=0.056 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 51 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 124 (256)
T 1geg_A 51 GHAVAVKVDVSDR------DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 124 (256)
T ss_dssp CCEEEEECCTTSH------HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4688999999985 35555554 79999999986432 2345578999999999998887642
Q ss_pred ---CC-CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ---KN-LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ---~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+ ..++|++||...... .| ....|+.||+..|.+++++
T Consensus 125 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~l 166 (256)
T 1geg_A 125 FKKEGHGGKIINACSQAGHVG----------NP----------------------------ELAVYSSSKFAVRGLTQTA 166 (256)
T ss_dssp HHHHTSCEEEEEECCGGGTSC----------CT----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEECchhhcCC----------CC----------------------------CchhHHHHHHHHHHHHHHH
Confidence 12 468999999754321 01 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccch
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
. ..+ ..++.+..++|.+|--
T Consensus 167 a------~e~~~~gi~v~~v~PG~v~t 187 (256)
T 1geg_A 167 A------RDLAPLGITVNGYCPGIVKT 187 (256)
T ss_dssp H------HHHGGGTEEEEEEEECSBSS
T ss_pred H------HHHHHcCeEEEEEEECCCcc
Confidence 4 222 3478888889988753
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=8.7e-05 Score=81.29 Aligned_cols=117 Identities=13% Similarity=0.049 Sum_probs=83.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 55 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 128 (260)
T 1x1t_A 55 VKVLYDGADLSKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128 (260)
T ss_dssp SCEEEECCCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35889999999853 4555543 68999999996431 2345578999999999999888531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||..++... + ....|+.||+..|.+++++.
T Consensus 129 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la 170 (260)
T 1x1t_A 129 MKKQGFGRIINIASAHGLVAS----------A----------------------------NKSAYVAAKHGVVGFTKVTA 170 (260)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEECcHHhCcCC----------C----------------------------CCchHHHHHHHHHHHHHHHH
Confidence 145799999997654320 0 01259999999999997754
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|..|.
T Consensus 171 ------~e~~~~gi~v~~v~Pg~v~ 189 (260)
T 1x1t_A 171 ------LETAGQGITANAICPGWVR 189 (260)
T ss_dssp ------HHHTTTTEEEEEEEECCBC
T ss_pred ------HHhccCCEEEEEEeecCcc
Confidence 222 347888888998775
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=9.8e-05 Score=80.45 Aligned_cols=116 Identities=16% Similarity=0.144 Sum_probs=82.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE-- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~-- 612 (1217)
.++.++.+|+++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (249)
T 2ew8_A 54 RRVLTVKCDVSQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 127 (249)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999853 455443 478999999996432 23455788999999888887753
Q ss_pred --hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 613 --EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 613 --~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+. +..++|++||..++... | ....|+.||+..|.+++++
T Consensus 128 ~~~~-~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~l 168 (249)
T 2ew8_A 128 MKRN-GWGRIINLTSTTYWLKI----------E----------------------------AYTHYISTKAANIGFTRAL 168 (249)
T ss_dssp HHHH-TCEEEEEECCGGGGSCC----------S----------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHHc-CCeEEEEEcchhhccCC----------C----------------------------CchhHHHHHHHHHHHHHHH
Confidence 33 45799999998654320 0 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+..++|.+|.
T Consensus 169 a------~e~~~~gi~v~~v~Pg~v~ 188 (249)
T 2ew8_A 169 A------SDLGKDGITVNAIAPSLVR 188 (249)
T ss_dssp H------HHHGGGTEEEEEEEECCC-
T ss_pred H------HHHHhcCcEEEEEecCcCc
Confidence 4 222 347888888898875
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.76 E-value=3.6e-05 Score=86.61 Aligned_cols=120 Identities=13% Similarity=0.090 Sum_probs=84.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 80 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 153 (301)
T 3tjr_A 80 FDAHGVVCDVRHLD------EMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPR 153 (301)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46899999999853 4555543 78999999996431 234557899999999999998753
Q ss_pred ---cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 ---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.+...++|++||...+.. .| ....|+.||+..|.+++++
T Consensus 154 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~l 195 (301)
T 3tjr_A 154 LLEQGTGGHIAFTASFAGLVP----------NA----------------------------GLGTYGVAKYGVVGLAETL 195 (301)
T ss_dssp HHHHCSCEEEEEECCGGGTSC----------CT----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEeCchhhcCC----------CC----------------------------CchHHHHHHHHHHHHHHHH
Confidence 212458999999765421 11 0125999999999998775
Q ss_pred cccccccccc-cCCCceeEeccCccchhh
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e~~ 718 (1217)
. .++ ..++.+..++|.+|.-.+
T Consensus 196 a------~e~~~~gi~v~~v~PG~v~T~~ 218 (301)
T 3tjr_A 196 A------REVKPNGIGVSVLCPMVVETKL 218 (301)
T ss_dssp H------HHHGGGTEEEEEECCSCCCSSH
T ss_pred H------HHhcccCcEEEEEECCcccccc
Confidence 4 222 347888888998885433
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.75 E-value=9.6e-05 Score=81.70 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=85.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhc----
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEM---- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~---- 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 74 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (278)
T 3sx2_A 74 SRIVARQADVRDRE------SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ 147 (278)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 57999999999853 5555554 78999999997543 3455678999999999999987642
Q ss_pred CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccc
Q psy13944 615 KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCA 694 (1217)
Q Consensus 615 ~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a 694 (1217)
+.-.++|++||........ .+ .+. ...|+.||+..|.+++++.
T Consensus 148 ~~~g~iv~isS~~~~~~~~--------~~-~~~-------------------------~~~Y~asKaa~~~~~~~la--- 190 (278)
T 3sx2_A 148 GTGGSIVLISSSAGLAGVG--------SA-DPG-------------------------SVGYVAAKHGVVGLMRVYA--- 190 (278)
T ss_dssp CSCEEEEEECCGGGTSCCC--------CS-SHH-------------------------HHHHHHHHHHHHHHHHHHH---
T ss_pred CCCcEEEEEccHHhcCCCc--------cC-CCC-------------------------chHhHHHHHHHHHHHHHHH---
Confidence 1245899999976542210 00 000 0149999999999998764
Q ss_pred cccccc-cCCCceeEeccCccc
Q psy13944 695 RSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 695 ~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|-+|-
T Consensus 191 ---~e~~~~gi~vn~v~PG~v~ 209 (278)
T 3sx2_A 191 ---NLLAGQMIRVNSIHPSGVE 209 (278)
T ss_dssp ---HHHGGGTEEEEEEEESCBS
T ss_pred ---HHHhccCcEEEEEecCCcc
Confidence 222 456888888888774
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.75 E-value=8.2e-05 Score=82.72 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=82.4
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-----------hhcHHHHHHHHHHHHHHHHHHHH
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-----------DEHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-----------~~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
+.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 73 ~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 146 (285)
T 2p91_A 73 DLVVKCDVSLDE------DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELL 146 (285)
T ss_dssp CCEEECCTTCHH------HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred eEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 678899999853 4555543 68999999996532 23445789999999999999997
Q ss_pred hc-C-CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 613 EM-K-NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 613 ~~-~-~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.. . +-.++|++||..++.. .| ....|+.||+..|.+++++
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 188 (285)
T 2p91_A 147 PLMEGRNGAIVTLSYYGAEKV----------VP----------------------------HYNVMGIAKAALESTVRYL 188 (285)
T ss_dssp GGGTTSCCEEEEEECGGGTSB----------CT----------------------------TTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEEccchhccC----------CC----------------------------CccHHHHHHHHHHHHHHHH
Confidence 54 1 2258999999654321 00 1125999999999999776
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+..++|..|.
T Consensus 189 a------~e~~~~gi~v~~v~PG~v~ 208 (285)
T 2p91_A 189 A------YDIAKHGHRINAISAGPVK 208 (285)
T ss_dssp H------HHHHTTTCEEEEEEECCCC
T ss_pred H------HHhcccCcEEEEEEeCccc
Confidence 4 223 347888888898774
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00014 Score=80.67 Aligned_cols=118 Identities=19% Similarity=0.183 Sum_probs=84.2
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
..++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 76 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 149 (280)
T 3pgx_A 76 GRKALTRVLDVRDDA------ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVP 149 (280)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 357899999999853 5555543 78999999997542 234557889999999999998853
Q ss_pred c----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 614 M----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 614 ~----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
. +.-.++|++||..++.. .| ....|+.||+..+.++++
T Consensus 150 ~~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~ 191 (280)
T 3pgx_A 150 AMIEAGNGGSIVVVSSSAGLKA----------TP----------------------------GNGHYSASKHGLTALTNT 191 (280)
T ss_dssp HHHHHCSCEEEEEECCGGGTSC----------CT----------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCEEEEEcchhhccC----------CC----------------------------CchhHHHHHHHHHHHHHH
Confidence 2 22457999999765422 01 012599999999999987
Q ss_pred hcccccccccc-cCCCceeEeccCccc
Q psy13944 690 FWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+. .++ ..++.+..++|.+|-
T Consensus 192 la------~e~~~~gi~vn~v~PG~v~ 212 (280)
T 3pgx_A 192 LA------IELGEYGIRVNSIHPYSVE 212 (280)
T ss_dssp HH------HHHGGGTEEEEEEEECSBC
T ss_pred HH------HHhhhcCeEEEEEeeCccc
Confidence 64 222 347888888888774
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0001 Score=80.69 Aligned_cols=117 Identities=15% Similarity=0.043 Sum_probs=82.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHH----
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKM---- 610 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLel---- 610 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++.+.
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 124 (254)
T 1hdc_A 51 DAARYQHLDVTIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124 (254)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35889999999853 5555544 79999999996432 234557889999999855544
Q ss_pred HHhcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 611 AEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 611 A~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+++. +..++|++||..++... | ....|+.||+..|.+++++
T Consensus 125 ~~~~-~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~l 165 (254)
T 1hdc_A 125 MKDA-GGGSIVNISSAAGLMGL----------A----------------------------LTSSYGASKWGVRGLSKLA 165 (254)
T ss_dssp HHHH-TCEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHc-CCCEEEEECchhhccCC----------C----------------------------CchhHHHHHHHHHHHHHHH
Confidence 4443 46799999997654320 0 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccch
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
. .++ ..++.+..++|..|.-
T Consensus 166 a------~e~~~~gi~v~~v~Pg~v~t 186 (254)
T 1hdc_A 166 A------VELGTDRIRVNSVHPGMTYT 186 (254)
T ss_dssp H------HHHGGGTEEEEEEEECSBCC
T ss_pred H------HHhhhcCeEEEEEecccCcC
Confidence 4 222 3578888889988753
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=97.74 E-value=6.2e-05 Score=83.67 Aligned_cols=118 Identities=13% Similarity=0.075 Sum_probs=83.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 73 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 146 (279)
T 3sju_A 73 HDVDGSSCDVTSTD------EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRA 146 (279)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhch
Confidence 46899999999853 4554443 68999999996532 234557889999999999998865
Q ss_pred --c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 614 --M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 614 --~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+ .+..++|++||..+... .+ ....|+.||+..+.++++
T Consensus 147 ~~~~~~~~g~iV~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~ 188 (279)
T 3sju_A 147 GGMREAGWGRIVNIASTGGKQG----------VM----------------------------YAAPYTASKHGVVGFTKS 188 (279)
T ss_dssp SSHHHHTCEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHH
T ss_pred hhHhhcCCcEEEEECChhhccC----------CC----------------------------CChhHHHHHHHHHHHHHH
Confidence 1 13468999999765321 00 112599999999999977
Q ss_pred hcccccccccc-cCCCceeEeccCccch
Q psy13944 690 FWGCARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 690 y~~~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
+. ..+ ..++.+..++|-+|.-
T Consensus 189 la------~e~~~~gi~vn~v~PG~v~T 210 (279)
T 3sju_A 189 VG------FELAKTGITVNAVCPGYVET 210 (279)
T ss_dssp HH------HHTGGGTEEEEEEEESSBCS
T ss_pred HH------HHHHhhCcEEEEEeeCcccc
Confidence 54 222 3467888888887753
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=5.3e-05 Score=83.17 Aligned_cols=115 Identities=15% Similarity=0.123 Sum_probs=82.3
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-----------hhcHHHHHHHHHHHHHHHHHHHH
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-----------DEHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-----------~~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
+.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 60 ~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 133 (261)
T 2wyu_A 60 ALLFRADVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE 133 (261)
T ss_dssp CEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred cEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 688999999853 4555544 68999999996432 23455789999999999999997
Q ss_pred hc-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 613 EM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 613 ~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.. .+-.++|++||..++.. .| ....|+.||+..|.+++++.
T Consensus 134 ~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~la 175 (261)
T 2wyu_A 134 PLLREGGGIVTLTYYASEKV----------VP----------------------------KYNVMAIAKAALEASVRYLA 175 (261)
T ss_dssp TTEEEEEEEEEEECGGGTSB----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCEEEEEecccccCC----------CC----------------------------CchHHHHHHHHHHHHHHHHH
Confidence 53 11148999999754321 00 01259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+..++|..|.
T Consensus 176 ------~e~~~~gi~v~~v~Pg~v~ 194 (261)
T 2wyu_A 176 ------YELGPKGVRVNAISAGPVR 194 (261)
T ss_dssp ------HHHGGGTCEEEEEEECCCC
T ss_pred ------HHHhhhCcEEEEEeeCCCc
Confidence 222 347888888998774
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.74 E-value=3.1e-05 Score=83.97 Aligned_cols=118 Identities=13% Similarity=0.093 Sum_probs=82.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 127 (247)
T 3lyl_A 54 FKARGLVLNISDIE------SIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRG 127 (247)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999853 4555443 57999999996532 2345578999999999999887642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...... .| ....|+.||+..|.+++++.
T Consensus 128 ~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la 169 (247)
T 3lyl_A 128 MMKKRWGRIISIGSVVGSAG----------NP----------------------------GQTNYCAAKAGVIGFSKSLA 169 (247)
T ss_dssp HHHHTCEEEEEECCTHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEEEcchhhccC----------CC----------------------------CcHHHHHHHHHHHHHHHHHH
Confidence 13458999999764321 00 11259999999999997764
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++--..++.+..++|-+|.
T Consensus 170 -----~e~~~~gi~v~~v~PG~v~ 188 (247)
T 3lyl_A 170 -----YEVASRNITVNVVAPGFIA 188 (247)
T ss_dssp -----HHHGGGTEEEEEEEECSBC
T ss_pred -----HHHHHcCeEEEEEeeCcEe
Confidence 1112346778888887774
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.74 E-value=3.8e-05 Score=93.00 Aligned_cols=113 Identities=21% Similarity=0.209 Sum_probs=85.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHHhcCCCcE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEEMKNLDS 619 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~~~~~lk~ 619 (1217)
.++.++.+|++|+ ++++.++++ +|+|||+||..... +.++..+++|+.|+.+|.++++.+.++.+
T Consensus 312 ~~v~~~~~Dvtd~------~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~ 385 (511)
T 2z5l_A 312 CEVVHAACDVAER------DALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDA 385 (511)
T ss_dssp CEEEEEECCSSCH------HHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCC
T ss_pred CEEEEEEeCCCCH------HHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCE
Confidence 4689999999985 467777654 99999999975432 34557789999999999999876546789
Q ss_pred EEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccc
Q psy13944 620 FIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSRE 698 (1217)
Q Consensus 620 fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~ 698 (1217)
||++||... +|. + ....|+.||+..|.++..+
T Consensus 386 ~V~~SS~a~~~g~-----------~----------------------------g~~~YaaaKa~ld~la~~~-------- 418 (511)
T 2z5l_A 386 FVLFSSVTGTWGN-----------A----------------------------GQGAYAAANAALDALAERR-------- 418 (511)
T ss_dssp EEEEEEGGGTTCC-----------T----------------------------TBHHHHHHHHHHHHHHHHH--------
T ss_pred EEEEeCHHhcCCC-----------C----------------------------CCHHHHHHHHHHHHHHHHH--------
Confidence 999999743 332 0 0025999999999998542
Q ss_pred cccCCCceeEeccCccc
Q psy13944 699 KCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 699 ~~~~~l~~~i~rp~~v~ 715 (1217)
-..++++..++|-++.
T Consensus 419 -~~~gi~v~sv~pG~~~ 434 (511)
T 2z5l_A 419 -RAAGLPATSVAWGLWG 434 (511)
T ss_dssp -HTTTCCCEEEEECCBC
T ss_pred -HHcCCcEEEEECCccc
Confidence 1458899999998874
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00014 Score=79.30 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=83.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|++++ ++++.+++ .+|++||+||... + .+.++..+++|+.|+.++++.+..
T Consensus 46 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 119 (248)
T 3asu_A 46 DNLYIAQLDVRNR------AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119 (248)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3688999999985 35666654 6899999999642 1 234557899999999999988862
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..++|++||...... .| ....|+.||+..|.+++++
T Consensus 120 ~m~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~l 161 (248)
T 3asu_A 120 GMVERNHGHIINIGSTAGSWP----------YA----------------------------GGNVYGATKAFVRQFSLNL 161 (248)
T ss_dssp HHHHHTCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCceEEEEccchhccC----------CC----------------------------CCchHHHHHHHHHHHHHHH
Confidence 1 14568999999764321 00 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+..++|.+|.
T Consensus 162 a------~e~~~~gi~v~~v~PG~v~ 181 (248)
T 3asu_A 162 R------TDLHGTAVRVTDIEPGLVG 181 (248)
T ss_dssp H------HHTTTSCCEEEEEEECSBC
T ss_pred H------HHhhhcCcEEEEEeccccc
Confidence 3 222 347888888898874
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0001 Score=81.45 Aligned_cols=115 Identities=14% Similarity=0.103 Sum_probs=82.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH---
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE--- 612 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~--- 612 (1217)
++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 60 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~ 133 (266)
T 3p19_A 60 NTLCAQVDVTDKY------TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPM 133 (266)
T ss_dssp TEEEEECCTTCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CceEEEecCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6889999999853 4555544 78999999996532 23455789999999999877764
Q ss_pred -hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 613 -EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 613 -~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+. +..++|++||..++.. .| ....|+.||+..+.+++++.
T Consensus 134 ~~~-~~g~IV~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~la 174 (266)
T 3p19_A 134 KAR-NCGTIINISSIAGKKT----------FP----------------------------DHAAYCGTKFAVHAISENVR 174 (266)
T ss_dssp HHH-TCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred Hhc-CCcEEEEEcChhhCCC----------CC----------------------------CCchHHHHHHHHHHHHHHHH
Confidence 32 4568999999765422 00 01259999999999997764
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|..|.
T Consensus 175 ------~e~~~~gi~vn~v~PG~v~ 193 (266)
T 3p19_A 175 ------EEVAASNVRVMTIAPSAVK 193 (266)
T ss_dssp ------HHHGGGTCEEEEEEECSBS
T ss_pred ------HHhcccCcEEEEEeeCccc
Confidence 222 347888888888774
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=97.72 E-value=5e-05 Score=92.29 Aligned_cols=189 Identities=14% Similarity=0.051 Sum_probs=124.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-H--H--------------------HhhhcCcccCCCeEEEEccCCCCCCCCCH
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-F--D--------------------RLRKENANFTERIVVLTADLQSDGLGLDE 64 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-f--d--------------------~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~ 64 (1217)
.-+||+.+.-|....++|.+.....+ . + .+.++....-.++.++.+|++++
T Consensus 254 vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~------ 327 (525)
T 3qp9_A 254 VLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA------ 327 (525)
T ss_dssp EEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH------
T ss_pred EEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH------
Confidence 34788888888888888876433211 1 0 11111111234689999999998
Q ss_pred HHHHHhcCC------ccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhcCC----CCeEEEEcCccccc
Q psy13944 65 KEKKVLRED------VNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEMKN----LDSFIYVSTAYSNC 127 (1217)
Q Consensus 65 edl~~L~~~------VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~~~----lk~fV~vSTa~v~g 127 (1217)
++++.+++. +|+|||+||.... .+.++..+++|+.|+.+|.+++..... +.+||++||.....
T Consensus 328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407 (525)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence 888777654 6999999998532 123557899999999999999987421 78999999976532
Q ss_pred ccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCC
Q psy13944 128 NIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 128 ~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~ 206 (1217)
.. + .-..|+.+|+..+.+..+.. .|++++.+.|+.+ ..
T Consensus 408 g~----------~----------------------------g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~t-- 446 (525)
T 3qp9_A 408 GG----------A----------------------------GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EG-- 446 (525)
T ss_dssp CC----------T----------------------------TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TT--
T ss_pred CC----------C----------------------------CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-cc--
Confidence 10 0 01359999999999877666 7999999999987 22
Q ss_pred CCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 207 EPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 207 eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
++ .... .....+. ..| ...+..+++++++..++....
T Consensus 447 -gm---~~~~-~~~~~~~--~~g------------~~~l~pee~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 447 -SR---VTEG-ATGERLR--RLG------------LRPLAPATALTALDTALGHGD 483 (525)
T ss_dssp -SG---GGSS-HHHHHHH--HTT------------BCCBCHHHHHHHHHHHHHHTC
T ss_pred -cc---ccch-hhHHHHH--hcC------------CCCCCHHHHHHHHHHHHhCCC
Confidence 11 1111 0011111 112 134788999999988876543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=5.6e-05 Score=83.05 Aligned_cols=117 Identities=14% Similarity=0.092 Sum_probs=82.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 127 (258)
T 3oid_A 54 VKVLVVKANVGQPA------KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKL 127 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 47899999999853 4555543 57999999985321 2334568999999999999988532
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||..++.. .+ ....|+.||+..|.+++++.
T Consensus 128 m~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~la 169 (258)
T 3oid_A 128 MEKNGGGHIVSISSLGSIRY----------LE----------------------------NYTTVGVSKAALEALTRYLA 169 (258)
T ss_dssp HHTTTCEEEEEEEEGGGTSB----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEECchhhCCC----------CC----------------------------CcHHHHHHHHHHHHHHHHHH
Confidence 23468999999754321 00 11259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|.+|.
T Consensus 170 ------~e~~~~gi~vn~v~PG~v~ 188 (258)
T 3oid_A 170 ------VELSPKQIIVNAVSGGAID 188 (258)
T ss_dssp ------HHTGGGTEEEEEEEECCBC
T ss_pred ------HHHhhcCcEEEEEeeCCCc
Confidence 223 346777778887774
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=5e-05 Score=82.74 Aligned_cols=117 Identities=13% Similarity=0.136 Sum_probs=82.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 56 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 129 (247)
T 2jah_A 56 AKVHVLELDVADRQ------GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPH 129 (247)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999853 4554443 78999999996432 2345578899999999999988642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+ .++|++||...... .| ....|+.||+..+.+++++.
T Consensus 130 ~~~~~-g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~la 170 (247)
T 2jah_A 130 LLRSK-GTVVQMSSIAGRVN----------VR----------------------------NAAVYQATKFGVNAFSETLR 170 (247)
T ss_dssp HHHHT-CEEEEECCGGGTCC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCC-CEEEEEccHHhcCC----------CC----------------------------CCcHHHHHHHHHHHHHHHHH
Confidence 13 68999999764321 00 01259999999998887653
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++--..++.+..++|-+|.
T Consensus 171 -----~e~~~~gi~v~~v~PG~v~ 189 (247)
T 2jah_A 171 -----QEVTERGVRVVVIEPGTTD 189 (247)
T ss_dssp -----HHHGGGTCEEEEEEECSBS
T ss_pred -----HHhcccCcEEEEEECCCCC
Confidence 1112457888888898874
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.70 E-value=8e-05 Score=81.50 Aligned_cols=117 Identities=11% Similarity=0.114 Sum_probs=78.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 129 (252)
T 3h7a_A 56 GRIVARSLDARNED------EVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLM 129 (252)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEECcCCCHH------HHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 46899999999853 5555554 68999999996432 2345578999999999999887431
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||...... .| ....|+.||+..+.+++++.
T Consensus 130 ~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~la- 170 (252)
T 3h7a_A 130 LAHGQGKIFFTGATASLRG----------GS----------------------------GFAAFASAKFGLRAVAQSMA- 170 (252)
T ss_dssp HHHTCEEEEEEEEGGGTCC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred HhcCCcEEEEECCHHHcCC----------CC----------------------------CCccHHHHHHHHHHHHHHHH-
Confidence 13468999999754321 01 01259999999999997754
Q ss_pred cccccccc-cCCCce-eEeccCccc
Q psy13944 693 CARSREKC-SHDRGV-RVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~-~i~rp~~v~ 715 (1217)
+++ ..++.+ ..+.|-+|.
T Consensus 171 -----~e~~~~gi~v~n~v~PG~v~ 190 (252)
T 3h7a_A 171 -----RELMPKNIHVAHLIIDSGVD 190 (252)
T ss_dssp -----HHHGGGTEEEEEEEEC----
T ss_pred -----HHhhhcCCEEEEEecCCccC
Confidence 222 235666 566776664
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.70 E-value=1.5e-05 Score=86.69 Aligned_cols=150 Identities=12% Similarity=0.046 Sum_probs=93.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-hH-------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh---cCCccEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-AF-------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL---REDVNIV 77 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-vf-------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L---~~~VDiV 77 (1217)
-+||+.+.-|....++|.+..... +. +.+.+...+. ....+. |..+. ...++.+ ...+|+|
T Consensus 5 lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~~~~~--~~~~v-----~~~~~~~~~~~g~iD~l 76 (244)
T 1zmo_A 5 LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PGTIAL--AEQKP-----ERLVDATLQHGEAIDTI 76 (244)
T ss_dssp EESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TTEEEC--CCCCG-----GGHHHHHGGGSSCEEEE
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CCCccc--CHHHH-----HHHHHHHHHHcCCCCEE
Confidence 378888899999999998742211 11 1111111111 122221 22111 0112222 3478999
Q ss_pred EEcCccCCc----------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 78 FHVAATVKF----------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 78 iH~AA~v~f----------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
||+||.... .+.++..+++|+.|+.++++++... .+..++|++||...+... |
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~---- 142 (244)
T 1zmo_A 77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL----------A---- 142 (244)
T ss_dssp EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------T----
T ss_pred EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC----------C----
Confidence 999997543 1235578999999999999887531 245689999997654321 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..+.+.+..+ .++.+.+++|+.|-.+
T Consensus 143 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 183 (244)
T 1zmo_A 143 ------------------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNP 183 (244)
T ss_dssp ------------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBT
T ss_pred ------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCC
Confidence 01369999999998887654 5799999999988665
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.70 E-value=6.7e-05 Score=83.60 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=83.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 130 (280)
T 3tox_A 57 GEAAALAGDVGDEA------LHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVP 130 (280)
T ss_dssp CCEEECCCCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 56899999999853 4555543 78999999996421 234557899999999999998864
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+-.++|++||..++.. +.+ ....|+.||+..|.+++++
T Consensus 131 ~~~~~~~g~iv~isS~~~~~~---------~~~----------------------------~~~~Y~asKaa~~~l~~~l 173 (280)
T 3tox_A 131 AIAALGGGSLTFTSSFVGHTA---------GFA----------------------------GVAPYAASKAGLIGLVQAL 173 (280)
T ss_dssp HHHHTTCEEEEEECCSBTTTB---------CCT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEcChhhCcC---------CCC----------------------------CchhHHHHHHHHHHHHHHH
Confidence 2 13458999999765411 000 0125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. .++ ..++.+..++|-+|.
T Consensus 174 a------~e~~~~gIrvn~v~PG~v~ 193 (280)
T 3tox_A 174 A------VELGARGIRVNALLPGGTD 193 (280)
T ss_dssp H------HHHHTTTEEEEEEEECSBS
T ss_pred H------HHhhhcCeEEEEEEECCCC
Confidence 4 223 346778888887774
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.69 E-value=4.6e-05 Score=83.86 Aligned_cols=119 Identities=16% Similarity=0.180 Sum_probs=83.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++.+..
T Consensus 60 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 133 (264)
T 3ucx_A 60 RRALSVGTDITDDA------QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133 (264)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 56899999999853 5555543 68999999986421 134557899999999999988754
Q ss_pred c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
. ++-.++|++||...... .+ ....|+.||+..|.+++++.
T Consensus 134 ~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~la 175 (264)
T 3ucx_A 134 ALEESKGAVVNVNSMVVRHS----------QA----------------------------KYGAYKMAKSALLAMSQTLA 175 (264)
T ss_dssp HHHHHTCEEEEECCGGGGCC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECcchhccC----------CC----------------------------ccHHHHHHHHHHHHHHHHHH
Confidence 2 01158999999764321 00 01259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccchh
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
.++ ..++.+..++|-+|--.
T Consensus 176 ------~e~~~~gi~vn~v~PG~v~t~ 196 (264)
T 3ucx_A 176 ------TELGEKGIRVNSVLPGYIWGG 196 (264)
T ss_dssp ------HHHHTTTCEEEEEEESSCBSH
T ss_pred ------HHhCccCeEEEEEecCccccc
Confidence 222 35788888899888533
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.68 E-value=9.4e-05 Score=82.33 Aligned_cols=154 Identities=16% Similarity=0.135 Sum_probs=86.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc--------------------------------
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------------------------------- 589 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------------------------------- 589 (1217)
.++.++.+|++++. +.++.+. ..+|+|||+||....
T Consensus 62 ~~~~~~~~Dl~~~~-----~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (311)
T 3o26_A 62 ENVVFHQLDVTDPI-----ATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQE 136 (311)
T ss_dssp CSEEEEECCTTSCH-----HHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHT
T ss_pred CceEEEEccCCCcH-----HHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhc
Confidence 47999999999961 1333332 379999999997532
Q ss_pred -----hhcHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEccceeecCcc---cccccccC-CCCChhHHHHHHhhCC
Q psy13944 590 -----DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIK---KIEEKFYE-PLYTHIEMEQIINSCS 657 (1217)
Q Consensus 590 -----~~~~~~~~~~NV~GT~nLLelA~~~---~~lk~fV~vSTa~v~g~~~---~I~E~~y~-~p~~p~~~~~l~~~~~ 657 (1217)
.+.++..+++|+.|+.++++.+... .+..++|++||........ ...+.... ................
T Consensus 137 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (311)
T 3o26_A 137 LMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLL 216 (311)
T ss_dssp TEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHH
T ss_pred ccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHH
Confidence 1234467899999999999888632 2346899999975543211 01111100 0111111111111100
Q ss_pred cchhhhhhhhccCCCC---ChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccch
Q psy13944 658 HTELTVLNDILIKPMP---NTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 658 ~~~~~~~~~~l~~~~p---NtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
.+..+... -...+| ..|+.||+..+.+++++. ++++ ++.+..+.|-.|.-
T Consensus 217 ~~~~~~~~--~~~~~~~~~~~Y~~SK~a~~~~~~~la------~e~~-~i~v~~v~PG~v~T 269 (311)
T 3o26_A 217 KDFKENLI--ETNGWPSFGAAYTTSKACLNAYTRVLA------NKIP-KFQVNCVCPGLVKT 269 (311)
T ss_dssp HHHHTTCT--TTTTCCSSCHHHHHHHHHHHHHHHHHH------HHCT-TSEEEEECCCSBCS
T ss_pred hhhhcccc--ccccCcccchhhHHHHHHHHHHHHHHH------hhcC-CceEEEecCCceec
Confidence 00000000 012232 469999999999998764 2333 37777788877753
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=97.68 E-value=4.1e-05 Score=86.97 Aligned_cols=117 Identities=15% Similarity=0.077 Sum_probs=81.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEMK 615 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~~ 615 (1217)
++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...-
T Consensus 60 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 133 (319)
T 3ioy_A 60 EVMGVQLDVASRE------GFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRM 133 (319)
T ss_dssp GEEEEECCTTCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6899999999853 4555543 67999999996422 23455789999999999999887531
Q ss_pred ---------CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHH
Q psy13944 616 ---------NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYII 686 (1217)
Q Consensus 616 ---------~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~l 686 (1217)
+-.+||++||..++... | ....|+.||+..+.+
T Consensus 134 ~~~~~~~~~~~g~iV~isS~a~~~~~----------~----------------------------~~~~Y~aSKaal~~~ 175 (319)
T 3ioy_A 134 VERVKAGEQKGGHVVNTASMAAFLAA----------G----------------------------SPGIYNTTKFAVRGL 175 (319)
T ss_dssp HHHHHTTSCCCCEEEEECCGGGTCCC----------S----------------------------SSHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcEEEEecccccccCC----------C----------------------------CCHHHHHHHHHHHHH
Confidence 13469999997654320 1 112599999966666
Q ss_pred hhhhcccccccccccCCCceeEeccCccc
Q psy13944 687 CLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 687 v~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+.++. ++-...++.+..++|-+|.
T Consensus 176 ~~~la-----~e~~~~gi~v~~v~PG~v~ 199 (319)
T 3ioy_A 176 SESLH-----YSLLKYEIGVSVLCPGLVK 199 (319)
T ss_dssp HHHHH-----HHHGGGTCEEEEECCCCBC
T ss_pred HHHHH-----HHhhhcCCEEEEEEcCeEc
Confidence 65542 1122457888889998885
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00016 Score=80.70 Aligned_cols=136 Identities=13% Similarity=-0.002 Sum_probs=88.0
Q ss_pred CCccEEEEcCccC-----Ccc----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 EDVNIVFHVAATV-----KFD----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 ~~VDiViH~AA~v-----~f~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
..+|++||+||.. .+. +.++..+++|+.|+.++++++... ..-.++|++||...... .|
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~----------~~- 186 (297)
T 1d7o_A 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI----------IP- 186 (297)
T ss_dssp SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC----------CT-
T ss_pred CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccC----------CC-
Confidence 4689999999853 121 235578999999999999998753 11148999999764321 00
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc------CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM------DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~------~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
.+...|+.||+..+.+.+..+ .++.+..++|+.|.++.....
T Consensus 187 --------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~------ 234 (297)
T 1d7o_A 187 --------------------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI------ 234 (297)
T ss_dssp --------------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC------
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc------
Confidence 011259999999988876543 389999999999988754321
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.....+...+.... ....+...+|+|++++.++..
T Consensus 235 -~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~l~s~ 269 (297)
T 1d7o_A 235 -GFIDTMIEYSYNNA---------PIQKTLTADEVGNAAAFLVSP 269 (297)
T ss_dssp -SHHHHHHHHHHHHS---------SSCCCBCHHHHHHHHHHHTSG
T ss_pred -cccHHHHHHhhccC---------CCCCCCCHHHHHHHHHHHhCc
Confidence 01111212111110 012356899999998877653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00013 Score=81.08 Aligned_cols=117 Identities=14% Similarity=0.091 Sum_probs=82.2
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh--
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-- 613 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~-- 613 (1217)
++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 78 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 151 (276)
T 2b4q_A 78 DCQAIPADLSSEA------GARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLL 151 (276)
T ss_dssp CEEECCCCTTSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ceEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6889999999853 4555443 68999999996432 244567899999999888887753
Q ss_pred --cCC---CcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 614 --MKN---LDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 614 --~~~---lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
.+. ..++|++||..++... | .....|+.||+..|.+++
T Consensus 152 ~~~~~~~~~g~iV~isS~~~~~~~----------~---------------------------~~~~~Y~asK~a~~~~~~ 194 (276)
T 2b4q_A 152 RRSASAENPARVINIGSVAGISAM----------G---------------------------EQAYAYGPSKAALHQLSR 194 (276)
T ss_dssp HHHCCSSSCEEEEEECCGGGTCCC----------C---------------------------CSCTTHHHHHHHHHHHHH
T ss_pred HhccCCCCCCEEEEECCHHHcCCC----------C---------------------------CCccccHHHHHHHHHHHH
Confidence 211 2789999998654320 0 011159999999999997
Q ss_pred hhcccccccccc-cCCCceeEeccCccc
Q psy13944 689 SFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 689 ~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
++. +++ ..++.+..++|-.|.
T Consensus 195 ~la------~e~~~~gI~vn~v~PG~v~ 216 (276)
T 2b4q_A 195 MLA------KELVGEHINVNVIAPGRFP 216 (276)
T ss_dssp HHH------HHHGGGTEEEEEEEECCCC
T ss_pred HHH------HHhcccCeEEEEEEeccCc
Confidence 764 222 347778888888775
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.67 E-value=5.7e-05 Score=82.93 Aligned_cols=121 Identities=15% Similarity=0.129 Sum_probs=84.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccc-c---c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATV-K---F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v-~---f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.. . + .+.++..+++|+.|+.++++.+..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 129 (262)
T 1zem_A 56 VEARSYVCDVTSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR 129 (262)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999853 4444433 789999999864 2 1 234557889999999999998865
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+..++|++||..++... | ....|+.||+..+.+++++
T Consensus 130 ~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~l 171 (262)
T 1zem_A 130 QMITQNYGRIVNTASMAGVKGP----------P----------------------------NMAAYGTSKGAIIALTETA 171 (262)
T ss_dssp HHHHHTCEEEEEECCHHHHSCC----------T----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEcchhhccCC----------C----------------------------CCchHHHHHHHHHHHHHHH
Confidence 2 134689999997554220 0 0125999999988888765
Q ss_pred cccccccccccCCCceeEeccCccchhh
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGETI 718 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e~~ 718 (1217)
. ++--..++.+..++|.+|.-.+
T Consensus 172 a-----~e~~~~gi~vn~v~PG~v~t~~ 194 (262)
T 1zem_A 172 A-----LDLAPYNIRVNAISPGYMGPGF 194 (262)
T ss_dssp H-----HHHGGGTEEEEEEEECSBCSSH
T ss_pred H-----HHHHhhCeEEEEEecCCcCcch
Confidence 4 1112347888888998875433
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00011 Score=79.02 Aligned_cols=117 Identities=18% Similarity=0.108 Sum_probs=82.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCc----cEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc--C
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDV----NIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM--K 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~v----dvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~--~ 615 (1217)
.++.++.+|++++ ++++.+++++ |+|||+||.... .+.++..+++|+.|+.++++.+... +
T Consensus 47 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 120 (230)
T 3guy_A 47 NNVGYRARDLASH------QEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKD 120 (230)
T ss_dssp SCCCEEECCTTCH------HHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hccCeEeecCCCH------HHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678899999985 4666666554 899999995431 2344578899999999999988753 1
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
+-.++|++||..++.. .+ ....|+.||+..+.+++++.
T Consensus 121 ~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~la---- 158 (230)
T 3guy_A 121 QPVNVVMIMSTAAQQP----------KA----------------------------QESTYCAVKWAVKGLIESVR---- 158 (230)
T ss_dssp SCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH----
T ss_pred CCCeEEEEeecccCCC----------CC----------------------------CCchhHHHHHHHHHHHHHHH----
Confidence 1228999999765422 01 01259999999999998764
Q ss_pred ccccc-cCCCceeEeccCccc
Q psy13944 696 SREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 696 ~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..+.|-+|.
T Consensus 159 --~e~~~~gi~v~~v~PG~v~ 177 (230)
T 3guy_A 159 --LELKGKPMKIIAVYPGGMA 177 (230)
T ss_dssp --HHTTTSSCEEEEEEECCC-
T ss_pred --HHHHhcCeEEEEEECCccc
Confidence 222 346777778887774
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00011 Score=80.42 Aligned_cols=115 Identities=10% Similarity=0.085 Sum_probs=81.9
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH----
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE---- 612 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~---- 612 (1217)
++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 59 ~~~~~~~D~~~~~------~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 132 (260)
T 2z1n_A 59 QVDIVAGDIREPG------DIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMV 132 (260)
T ss_dssp CEEEEECCTTCHH------HHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEccCCCHH------HHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 6889999999853 5555554 49999999995432 23455789999999977777664
Q ss_pred hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 613 EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 613 ~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
+. +..++|++||..++... + ....|+.||+..|.+++++.
T Consensus 133 ~~-~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la- 172 (260)
T 2z1n_A 133 EK-GWGRMVYIGSVTLLRPW----------Q----------------------------DLALSNIMRLPVIGVVRTLA- 172 (260)
T ss_dssp HH-TCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHTHHHHHHHHHHH-
T ss_pred hc-CCcEEEEECchhhcCCC----------C----------------------------CCchhHHHHHHHHHHHHHHH-
Confidence 33 46799999998654320 0 01259999999999997754
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..++|..|.
T Consensus 173 -----~e~~~~gi~v~~v~Pg~v~ 191 (260)
T 2z1n_A 173 -----LELAPHGVTVNAVLPSLIL 191 (260)
T ss_dssp -----HHHGGGTEEEEEEEECHHH
T ss_pred -----HHHhhhCeEEEEEEECCcc
Confidence 222 347888888898774
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=8.1e-05 Score=81.65 Aligned_cols=116 Identities=15% Similarity=0.117 Sum_probs=82.6
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc-------c----hhcHHHHHHHHHHHHHHHHHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK-------F----DEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~-------f----~~~~~~~~~~NV~GT~nLLelA 611 (1217)
++.++.+|+++++ +++.+++ .+|++||+||... + .+.+...+++|+.|+.++++.+
T Consensus 60 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 133 (266)
T 3oig_A 60 DSIILPCDVTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAA 133 (266)
T ss_dssp CCEEEECCCSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEeCCCCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHH
Confidence 6899999999864 4444443 6899999999643 1 2334468899999999999999
Q ss_pred Hhc-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 EEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 ~~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
... .+-.++|++||...... .| ....|+.||+..+.+++++
T Consensus 134 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~l 175 (266)
T 3oig_A 134 RPMMTEGGSIVTLTYLGGELV----------MP----------------------------NYNVMGVAKASLDASVKYL 175 (266)
T ss_dssp GGGCTTCEEEEEEECGGGTSC----------CT----------------------------TTHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCceEEEEeccccccc----------CC----------------------------CcchhHHHHHHHHHHHHHH
Confidence 764 22348999999764321 01 0125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ ..++.+..++|-+|.
T Consensus 176 a------~e~~~~gi~v~~v~PG~v~ 195 (266)
T 3oig_A 176 A------ADLGKENIRVNSISAGPIR 195 (266)
T ss_dssp H------HHHGGGTEEEEEEEECCCC
T ss_pred H------HHHhhcCcEEEEEecCccc
Confidence 4 222 346778888887774
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.67 E-value=9.9e-05 Score=81.86 Aligned_cols=117 Identities=13% Similarity=0.071 Sum_probs=83.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ +.+.+. ..+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 79 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 152 (273)
T 3uf0_A 79 GSAEAVVADLADLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAM 152 (273)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 56899999999854 344332 378999999996542 2345578999999999999987421
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||..++.. .+ ....|+.||+..|.+++++.
T Consensus 153 ~~~~~g~IV~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~la- 193 (273)
T 3uf0_A 153 LAHGSGRIVTIASMLSFQG----------GR----------------------------NVAAYAASKHAVVGLTRALA- 193 (273)
T ss_dssp HHHTCEEEEEECCGGGTSC----------CS----------------------------SCHHHHHHHHHHHHHHHHHH-
T ss_pred HhcCCCEEEEEcchHhcCC----------CC----------------------------CChhHHHHHHHHHHHHHHHH-
Confidence 14568999999765422 00 01259999999999998764
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|-+|.
T Consensus 194 -----~e~~~~gI~vn~v~PG~v~ 212 (273)
T 3uf0_A 194 -----SEWAGRGVGVNALAPGYVV 212 (273)
T ss_dssp -----HHHGGGTEEEEEEEECSBC
T ss_pred -----HHHhhcCcEEEEEEeCCCc
Confidence 222 346888888887774
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.66 E-value=5.9e-05 Score=83.58 Aligned_cols=117 Identities=11% Similarity=0.063 Sum_probs=82.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 75 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 148 (271)
T 4ibo_A 75 HDAEAVAFDVTSES------EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKR 148 (271)
T ss_dssp CCEEECCCCTTCHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999853 5555544 68999999996431 2345578999999999998877642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...... .+ ....|+.||+..|.+++++.
T Consensus 149 ~~~~~~g~iV~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~la 190 (271)
T 4ibo_A 149 MIPRGYGKIVNIGSLTSELA----------RA----------------------------TVAPYTVAKGGIKMLTRAMA 190 (271)
T ss_dssp HHHHTCEEEEEECCGGGTSB----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEccHHhCCC----------CC----------------------------CchhHHHHHHHHHHHHHHHH
Confidence 13458999999654321 00 11259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|-+|.
T Consensus 191 ------~e~~~~gI~vn~v~PG~v~ 209 (271)
T 4ibo_A 191 ------AEWAQYGIQANAIGPGYML 209 (271)
T ss_dssp ------HHHGGGTEEEEEEEECSBC
T ss_pred ------HHHhhhCeEEEEEEeccEe
Confidence 222 346778888887775
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00014 Score=82.97 Aligned_cols=117 Identities=16% Similarity=0.181 Sum_probs=84.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC-----ccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED-----VNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~-----vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~-- 614 (1217)
.++.++.+|++++ ++++.+++. +|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 57 ~~~~~~~~Dv~d~------~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~ 130 (327)
T 1jtv_A 57 GSLETLQLDVRDS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK 130 (327)
T ss_dssp TSEEEEECCTTCH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCH------HHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4689999999985 466666654 8999999986421 2345578999999999999987321
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
.+..+||++||...+.. .| ....|+.||+..|.++.++.
T Consensus 131 ~~~~g~IV~isS~~~~~~----------~~----------------------------~~~~Y~aSK~a~~~~~~~la-- 170 (327)
T 1jtv_A 131 RRGSGRVLVTGSVGGLMG----------LP----------------------------FNDVYCASKFALEGLCESLA-- 170 (327)
T ss_dssp HHTCEEEEEEEEGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH--
T ss_pred hcCCCEEEEECCcccccC----------CC----------------------------CChHHHHHHHHHHHHHHHHH--
Confidence 24679999999764321 01 01259999999999997754
Q ss_pred ccccccc-cCCCceeEeccCccc
Q psy13944 694 ARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 694 a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+..++|-+|.
T Consensus 171 ----~el~~~gI~v~~v~PG~v~ 189 (327)
T 1jtv_A 171 ----VLLLPFGVHLSLIECGPVH 189 (327)
T ss_dssp ----HHHGGGTEEEEEEEECCBC
T ss_pred ----HHhhhcCcEEEEEEeCccc
Confidence 222 357888888998775
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00012 Score=81.35 Aligned_cols=119 Identities=14% Similarity=0.074 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 81 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 154 (276)
T 3r1i_A 81 GKALPIRCDVTQPD------QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA 154 (276)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999853 5555554 78999999996542 2345577899999999999988642
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+.-.++|++||....... .+ .....|+.||+..|.+++++
T Consensus 155 m~~~~~~g~iv~isS~~~~~~~---------~~---------------------------~~~~~Y~asKaa~~~l~~~l 198 (276)
T 3r1i_A 155 MVDQGLGGTIITTASMSGHIIN---------IP---------------------------QQVSHYCTSKAAVVHLTKAM 198 (276)
T ss_dssp HHHHTSCEEEEEECCGGGTSCC---------CS---------------------------SCCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCcEEEEECchHhcccC---------CC---------------------------CCcchHHHHHHHHHHHHHHH
Confidence 112579999997643210 00 00125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +++ ..++.+..++|-.|.
T Consensus 199 a------~e~~~~gIrvn~v~PG~v~ 218 (276)
T 3r1i_A 199 A------VELAPHQIRVNSVSPGYIR 218 (276)
T ss_dssp H------HHHGGGTEEEEEEEECCBC
T ss_pred H------HHHhhcCcEEEEEeeCCCc
Confidence 4 222 346778888887775
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=97.66 E-value=7.7e-05 Score=81.37 Aligned_cols=116 Identities=15% Similarity=0.096 Sum_probs=82.2
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 56 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m 129 (248)
T 3op4_A 56 NGKGMALNVTNPE------SIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 129 (248)
T ss_dssp GEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4778999999853 5555554 78999999996532 2445578999999999999988541
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||...... .| ....|+.||+..+.+++++.
T Consensus 130 ~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~l~~~la- 170 (248)
T 3op4_A 130 MKKRQGRIINVGSVVGTMG----------NA----------------------------GQANYAAAKAGVIGFTKSMA- 170 (248)
T ss_dssp HHHTCEEEEEECCHHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred HHcCCCEEEEEcchhhcCC----------CC----------------------------CChHHHHHHHHHHHHHHHHH-
Confidence 24568999999754321 00 11259999999999987754
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|-+|.
T Consensus 171 -----~e~~~~gi~vn~v~PG~v~ 189 (248)
T 3op4_A 171 -----REVASRGVTVNTVAPGFIE 189 (248)
T ss_dssp -----HHHGGGTEEEEEEEECSBS
T ss_pred -----HHHHHhCeEEEEEeeCCCC
Confidence 222 346777788887774
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00026 Score=78.82 Aligned_cols=152 Identities=11% Similarity=0.120 Sum_probs=98.7
Q ss_pred hcccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEE
Q psy13944 510 HRSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFH 582 (1217)
Q Consensus 510 ~~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH 582 (1217)
-.|.+++++-|+.+..+.+.+.++.. ...+... ..++.++.+|+++++ +++.+++ .+|++||
T Consensus 31 ~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvn 99 (285)
T 3sc4_A 31 ADGANVALVAKSAEPHPKLPGTIYTA-AKEIEEA----GGQALPIVGDIRDGD------AVAAAVAKTVEQFGGIDICVN 99 (285)
T ss_dssp TTTCEEEEEESCCSCCSSSCCCHHHH-HHHHHHH----TSEEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEE
T ss_pred HCCCEEEEEECChhhhhhhhHHHHHH-HHHHHhc----CCcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEE
Confidence 35778888877665444433322221 1122221 247899999999853 4555544 7899999
Q ss_pred cCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-C--CCcEEEEEccceeecCcccccccccCCCCChhHHHHH
Q psy13944 583 VAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-K--NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 652 (1217)
Q Consensus 583 ~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~-~--~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l 652 (1217)
+||.... .+.++..+++|+.|+.++++.+... . +..++|++||....... +
T Consensus 100 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------~------------ 160 (285)
T 3sc4_A 100 NASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK-------W------------ 160 (285)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-------G------------
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-------C------------
Confidence 9996532 2344578889999999999988753 1 34589999997543210 0
Q ss_pred HhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccc-cCCCceeEeccC-ccc
Q psy13944 653 INSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKC-SHDRGVRVCRNH-PVG 715 (1217)
Q Consensus 653 ~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~-~~~l~~~i~rp~-~v~ 715 (1217)
.....|+.||+..+.+++++. .++ ..++.+..+.|- ++.
T Consensus 161 ------------------~~~~~Y~asKaal~~~~~~la------~e~~~~gI~vn~v~PG~~v~ 201 (285)
T 3sc4_A 161 ------------------LRPTPYMMAKYGMTLCALGIA------EELRDAGIASNTLWPRTTVA 201 (285)
T ss_dssp ------------------SCSHHHHHHHHHHHHHHHHHH------HHTGGGTCEEEEEECSSCBC
T ss_pred ------------------CCCchHHHHHHHHHHHHHHHH------HHhcccCcEEEEEeCCCccc
Confidence 011259999999999998754 222 356888888887 454
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00027 Score=81.41 Aligned_cols=155 Identities=10% Similarity=0.124 Sum_probs=100.7
Q ss_pred hcccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEE
Q psy13944 510 HRSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFH 582 (1217)
Q Consensus 510 ~~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH 582 (1217)
-.|.+++++-|..+..+.+...++.. .+.+.. ...++.++.+|+++++ +++.+++ .+|+|||
T Consensus 67 ~~Ga~Vvl~~r~~~~~~~l~~~l~~~-~~~~~~----~g~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iDilVn 135 (346)
T 3kvo_A 67 KDGANIVIAAKTAQPHPKLLGTIYTA-AEEIEA----VGGKALPCIVDVRDEQ------QISAAVEKAIKKFGGIDILVN 135 (346)
T ss_dssp TTTCEEEEEESCCSCCSSSCCCHHHH-HHHHHH----TTCEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEE
T ss_pred HCCCEEEEEECChhhhhhhHHHHHHH-HHHHHh----cCCeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEE
Confidence 45777777776655444433322221 122222 1357899999999853 4555543 7899999
Q ss_pred cCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHH
Q psy13944 583 VAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 652 (1217)
Q Consensus 583 ~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l 652 (1217)
+||.... .+.++..+++|+.|+.++++.+... .+..++|++||........ .
T Consensus 136 nAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~--------~---------- 197 (346)
T 3kvo_A 136 NASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW--------F---------- 197 (346)
T ss_dssp CCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG--------T----------
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC--------C----------
Confidence 9996432 2445578999999999999998532 2346899999976443200 0
Q ss_pred HhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccC-ccchh
Q psy13944 653 INSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNH-PVGET 717 (1217)
Q Consensus 653 ~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~-~v~e~ 717 (1217)
.....|+.||+..+.+++++. ++++.++.+..+.|- ++...
T Consensus 198 ------------------~~~~~Y~aSKaal~~l~~~la------~e~~~gIrvn~v~PG~~i~T~ 239 (346)
T 3kvo_A 198 ------------------KQHCAYTIAKYGMSMYVLGMA------EEFKGEIAVNALWPKTAIHTA 239 (346)
T ss_dssp ------------------SSSHHHHHHHHHHHHHHHHHH------HHTTTTCEEEEEECSBCBCCH
T ss_pred ------------------CCchHHHHHHHHHHHHHHHHH------HHhcCCcEEEEEeCCCccccH
Confidence 011259999999999998764 344467888888887 35433
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00015 Score=79.90 Aligned_cols=117 Identities=15% Similarity=0.104 Sum_probs=82.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 71 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 144 (267)
T 1vl8_A 71 VETMAFRCDVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144 (267)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36889999999853 4555543 68999999996532 134457889999999999988753
Q ss_pred c--CCCcEEEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M--KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~--~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ .+..++|++||..+ ... .+ ....|+.||+..|.+++++
T Consensus 145 m~~~~~g~iv~isS~~~~~~~----------~~----------------------------~~~~Y~asK~a~~~~~~~l 186 (267)
T 1vl8_A 145 LRESDNPSIINIGSLTVEEVT----------MP----------------------------NISAYAASKGGVASLTKAL 186 (267)
T ss_dssp HTTCSSCEEEEECCGGGTCCC----------SS----------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCcchhccC----------CC----------------------------CChhHHHHHHHHHHHHHHH
Confidence 1 24579999999752 110 00 0125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. +.+ ..++.+..++|..|.
T Consensus 187 a------~e~~~~gi~v~~v~PG~v~ 206 (267)
T 1vl8_A 187 A------KEWGRYGIRVNVIAPGWYR 206 (267)
T ss_dssp H------HHHGGGTCEEEEEEECCBC
T ss_pred H------HHhcccCeEEEEEEeccCc
Confidence 4 222 347888888998775
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00014 Score=81.28 Aligned_cols=117 Identities=16% Similarity=0.114 Sum_probs=84.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc--------chhcHHHHHHHHHHHHHHHHHHHH-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK--------FDEHFQTAFEINCKGTEKLLKMAE- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~--------f~~~~~~~~~~NV~GT~nLLelA~- 612 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||... -.+.++..+++|+.|+.++++.+.
T Consensus 87 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 160 (287)
T 3rku_A 87 AKVHVAQLDITQAE------KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLP 160 (287)
T ss_dssp CEEEEEECCTTCGG------GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999965 4555543 5899999999643 124456789999999999999884
Q ss_pred ---hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 613 ---EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 613 ---~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+. +..++|++||...... .| ....|+.||+..+.++++
T Consensus 161 ~m~~~-~~g~IV~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~ 201 (287)
T 3rku_A 161 IFQAK-NSGDIVNLGSIAGRDA----------YP----------------------------TGSIYCASKFAVGAFTDS 201 (287)
T ss_dssp HHHHH-TCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhc-CCCeEEEECChhhcCC----------CC----------------------------CCchHHHHHHHHHHHHHH
Confidence 32 4568999999764321 01 012599999999999977
Q ss_pred hcccccccccccCCCceeEeccCccc
Q psy13944 690 FWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
+. ++-...++.+..++|-+|.
T Consensus 202 la-----~e~~~~gIrvn~v~PG~v~ 222 (287)
T 3rku_A 202 LR-----KELINTKIRVILIAPGLVE 222 (287)
T ss_dssp HH-----HHTTTSSCEEEEEEESCEE
T ss_pred HH-----HHhhhcCCEEEEEeCCcCc
Confidence 54 1122457888888888775
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00011 Score=81.46 Aligned_cols=119 Identities=15% Similarity=0.082 Sum_probs=83.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.++.++.+|+++++ +.+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 82 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 155 (275)
T 4imr_A 82 GTAQELAGDLSEAG------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKM 155 (275)
T ss_dssp CCEEEEECCTTSTT------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 56899999999975 344443 378999999995321 2345578899999999999988431
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||...+.. .+ ....|+.||+..+.+++++.
T Consensus 156 ~~~~~g~Iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~la- 196 (275)
T 4imr_A 156 VARKWGRVVSIGSINQLRP----------KS----------------------------VVTAYAATKAAQHNLIQSQA- 196 (275)
T ss_dssp HHHTCEEEEEECCGGGTSC----------CT----------------------------TBHHHHHHHHHHHHHHHHHH-
T ss_pred HhcCCcEEEEECCHHhCCC----------CC----------------------------CchhhHHHHHHHHHHHHHHH-
Confidence 14568999999754321 00 01249999999999997754
Q ss_pred cccccccc-cCCCceeEeccCccchh
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
.++ ..++.+..++|-+|.-.
T Consensus 197 -----~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 197 -----RDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp -----HHHGGGTEEEEEEEESSBCSH
T ss_pred -----HHhcccCcEEEEEEeccccCc
Confidence 223 34677778888777533
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00015 Score=80.74 Aligned_cols=117 Identities=12% Similarity=0.065 Sum_probs=83.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 76 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 149 (281)
T 3v2h_A 76 GTVLHHPADMTKPS------EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPP 149 (281)
T ss_dssp SCEEEECCCTTCHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999853 5555543 78999999996432 2345578999999999999988421
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||...+.. .| ....|+.||+..|.+++++.
T Consensus 150 ~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~l~~~la 191 (281)
T 3v2h_A 150 MKKKGWGRIINIASAHGLVA----------SP----------------------------FKSAYVAAKHGIMGLTKTVA 191 (281)
T ss_dssp HHHHTCEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECCcccccC----------CC----------------------------CchHHHHHHHHHHHHHHHHH
Confidence 14568999999764321 01 01259999999999998764
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+..++|-.|.
T Consensus 192 ------~e~~~~gI~vn~v~PG~v~ 210 (281)
T 3v2h_A 192 ------LEVAESGVTVNSICPGYVL 210 (281)
T ss_dssp ------HHHGGGTEEEEEEEECSBC
T ss_pred ------HHhhhcCcEEEEEECCCCc
Confidence 222 346788888887775
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00018 Score=78.85 Aligned_cols=118 Identities=10% Similarity=0.084 Sum_probs=84.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 73 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 146 (266)
T 3o38_A 73 GRVEAVVCDVTSTE------AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRY 146 (266)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999853 5555543 67999999996432 2345578999999999999988753
Q ss_pred ----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 615 ----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 615 ----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
++..++|++||...+... + ....|+.||+..|.+++++
T Consensus 147 ~~~~~~~~~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l 188 (266)
T 3o38_A 147 FRGVDHGGVIVNNASVLGWRAQ----------H----------------------------SQSHYAAAKAGVMALTRCS 188 (266)
T ss_dssp HHTSSCCEEEEEECCGGGTCCC----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEeCCHHHcCCC----------C----------------------------CCchHHHHHHHHHHHHHHH
Confidence 234689999997654220 0 1125999999999999876
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++-...++.+..++|-+|.
T Consensus 189 a-----~e~~~~gi~v~~v~PG~v~ 208 (266)
T 3o38_A 189 A-----IEAVEFGVRINAVSPSIAR 208 (266)
T ss_dssp H-----HHHGGGTEEEEEEEECCCC
T ss_pred H-----HHHHHcCcEEEEEeCCccc
Confidence 4 1112346778888887775
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00016 Score=80.91 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=85.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc--------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF--------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f--------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 97 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 170 (291)
T 3ijr_A 97 VKCVLLPGDLSDEQ------HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALS 170 (291)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57899999999853 4555543 68999999996421 234557899999999999999986
Q ss_pred c-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 614 M-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 614 ~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
. .+..++|++||..++... + ....|+.||+..|.+++++.
T Consensus 171 ~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la- 211 (291)
T 3ijr_A 171 HLKQGDVIINTASIVAYEGN----------E----------------------------TLIDYSATKGAIVAFTRSLS- 211 (291)
T ss_dssp TCCTTCEEEEECCTHHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred HHhhCCEEEEEechHhcCCC----------C----------------------------CChhHHHHHHHHHHHHHHHH-
Confidence 3 233589999997654320 0 01259999999999998764
Q ss_pred cccccccc-cCCCceeEeccCccch
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
.++ ..++.+..++|.+|.-
T Consensus 212 -----~e~~~~gi~vn~v~PG~v~T 231 (291)
T 3ijr_A 212 -----QSLVQKGIRVNGVAPGPIWT 231 (291)
T ss_dssp -----HHHGGGTCEEEEEEECSBCS
T ss_pred -----HHHhhcCEEEEEEeeCCCcC
Confidence 222 3478888888987753
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00012 Score=78.90 Aligned_cols=115 Identities=13% Similarity=0.021 Sum_probs=80.8
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHh---------cCccEEEEcCcccc---c-----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLR---------EDVNIVFHVAATVK---F-----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~---------~~vdvVfH~AA~v~---f-----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
..++.+|+++++ +++.++ ..+|+|||+||... + .+.++..+++|+.|+.++++.+..
T Consensus 44 ~~~~~~D~~~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 117 (236)
T 1ooe_A 44 NILVDGNKNWTE------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATT 117 (236)
T ss_dssp EEECCTTSCHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEeCCCCCHH------HHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 567789998753 444443 37899999999542 1 234457889999999999999876
Q ss_pred c-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 614 M-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 614 ~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
. .+-.++|++||..++.. .| ....|+.||+..|.+++++.
T Consensus 118 ~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~la- 158 (236)
T 1ooe_A 118 HLKPGGLLQLTGAAAAMGP----------TP----------------------------SMIGYGMAKAAVHHLTSSLA- 158 (236)
T ss_dssp HEEEEEEEEEECCGGGGSC----------CT----------------------------TBHHHHHHHHHHHHHHHHHH-
T ss_pred HhccCCEEEEECchhhccC----------CC----------------------------CcHHHHHHHHHHHHHHHHHH-
Confidence 3 11248999999765421 00 01259999999999998764
Q ss_pred cccccccc---cCCCceeEeccCccc
Q psy13944 693 CARSREKC---SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~---~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+..++|..|.
T Consensus 159 -----~e~~~~~~gi~v~~v~Pg~v~ 179 (236)
T 1ooe_A 159 -----AKDSGLPDNSAVLTIMPVTLD 179 (236)
T ss_dssp -----STTSSCCTTCEEEEEEESCBC
T ss_pred -----HHhcccCCCeEEEEEecCccc
Confidence 222 456888888998875
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.64 E-value=4.6e-05 Score=83.43 Aligned_cols=116 Identities=19% Similarity=0.130 Sum_probs=82.4
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc------------hhcHHHHHHHHHHHHHHHHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF------------DEHFQTAFEINCKGTEKLLKM 610 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f------------~~~~~~~~~~NV~GT~nLLel 610 (1217)
++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.
T Consensus 65 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 138 (271)
T 3ek2_A 65 SELVFPCDVADDA------QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKA 138 (271)
T ss_dssp CCCEEECCTTCHH------HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHH
T ss_pred CcEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHH
Confidence 4788999999853 5555543 67999999996432 234457889999999999999
Q ss_pred HHhc-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 611 AEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 611 A~~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+... .+-.++|++||..+... .| ....|+.||+..|.++++
T Consensus 139 ~~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~~~~ 180 (271)
T 3ek2_A 139 ALPMLSDDASLLTLSYLGAERA----------IP----------------------------NYNTMGLAKAALEASVRY 180 (271)
T ss_dssp HGGGEEEEEEEEEEECGGGTSB----------CT----------------------------TTTHHHHHHHHHHHHHHH
T ss_pred HHHHhccCceEEEEeccccccC----------CC----------------------------CccchhHHHHHHHHHHHH
Confidence 8753 11237999999765322 00 113699999999999987
Q ss_pred hcccccccccc-cCCCceeEeccCccc
Q psy13944 690 FWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+. +++ ..++.+..++|-.|.
T Consensus 181 la------~e~~~~gi~v~~v~PG~v~ 201 (271)
T 3ek2_A 181 LA------VSLGAKGVRVNAISAGPIK 201 (271)
T ss_dssp HH------HHHHTTTCEEEEEEECCC-
T ss_pred HH------HHHHhcCcEEEEEecCccc
Confidence 64 223 347888888888775
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00015 Score=80.26 Aligned_cols=118 Identities=13% Similarity=0.167 Sum_probs=83.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|++|++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 78 ~~~~~~~~D~~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 151 (269)
T 4dmm_A 78 GEAFAVKADVSQES------EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKI 151 (269)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999853 4555544 78999999996532 2445578999999999999987431
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||..+... .+ ....|+.||+..|.+++++.
T Consensus 152 ~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~asK~a~~~l~~~la 193 (269)
T 4dmm_A 152 MLKQRSGRIINIASVVGEMG----------NP----------------------------GQANYSAAKAGVIGLTKTVA 193 (269)
T ss_dssp HHHHTCCEEEEECCHHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECchhhcCC----------CC----------------------------CchhHHHHHHHHHHHHHHHH
Confidence 13468999999754321 00 11259999999999987754
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++--..++.+..++|-.|.
T Consensus 194 -----~e~~~~gi~vn~v~PG~v~ 212 (269)
T 4dmm_A 194 -----KELASRGITVNAVAPGFIA 212 (269)
T ss_dssp -----HHHGGGTCEEEEEEECCBT
T ss_pred -----HHHhhhCcEEEEEEECCCc
Confidence 1112347888888887774
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.63 E-value=5.3e-05 Score=82.78 Aligned_cols=117 Identities=12% Similarity=0.045 Sum_probs=79.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCcccc--------chhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVK--------FDEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~--------f~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.+++ .+|+|||+||... -.+.++..+++|+.|+.++++.+..
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 128 (261)
T 3n74_A 55 DAALAVAADISKEA------DVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIP 128 (261)
T ss_dssp TTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46899999999853 4555543 6899999999653 1234557889999999999888764
Q ss_pred cC-------CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHH
Q psy13944 614 MK-------NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYII 686 (1217)
Q Consensus 614 ~~-------~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~l 686 (1217)
.- +..++|++||...+.. .| ....|+.||+..|.+
T Consensus 129 ~~~~~~~~~~~~~iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaa~~~~ 170 (261)
T 3n74_A 129 HFKENGAKGQECVILNVASTGAGRP----------RP----------------------------NLAWYNATKGWVVSV 170 (261)
T ss_dssp HHHHHHHTTCCEEEEEECCTTTTSC----------CT----------------------------TCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCeEEEEeCchhhcCC----------CC----------------------------CccHHHHHHHHHHHH
Confidence 20 1236999999754321 01 112499999999999
Q ss_pred hhhhcccccccccc-cCCCceeEeccCccc
Q psy13944 687 CLSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 687 v~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
++++. +++ ..++.+..++|-+|.
T Consensus 171 ~~~la------~e~~~~gi~v~~v~PG~v~ 194 (261)
T 3n74_A 171 TKALA------IELAPAKIRVVALNPVAGE 194 (261)
T ss_dssp HHHHH------HHHGGGTEEEEEEEEC---
T ss_pred HHHHH------HHhhhcCcEEEEEecCccc
Confidence 98764 222 346777777887664
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00013 Score=80.73 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=84.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM- 614 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~- 614 (1217)
.+..+.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 127 (269)
T 3vtz_A 54 VSDHFKIDVTNEE------EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM 127 (269)
T ss_dssp SSEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ceeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4677889999853 4555543 78999999996432 2344578899999999999887641
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+..++|++||..++... + ....|+.||+..|.+++++.
T Consensus 128 ~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la- 168 (269)
T 3vtz_A 128 LAIGHGSIINIASVQSYAAT----------K----------------------------NAAAYVTSKHALLGLTRSVA- 168 (269)
T ss_dssp HHHTCEEEEEECCGGGTSBC----------T----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred HHcCCCEEEEECchhhccCC----------C----------------------------CChhHHHHHHHHHHHHHHHH-
Confidence 145689999998665321 0 01259999999999998764
Q ss_pred cccccccccCCCceeEeccCccchh
Q psy13944 693 CARSREKCSHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 693 ~a~~~~~~~~~l~~~i~rp~~v~e~ 717 (1217)
..++.++.+..++|-.|.-.
T Consensus 169 -----~e~~~~i~vn~v~PG~v~T~ 188 (269)
T 3vtz_A 169 -----IDYAPKIRCNAVCPGTIMTP 188 (269)
T ss_dssp -----HHHTTTEEEEEEEECSBCCH
T ss_pred -----HHhcCCCEEEEEEECCCcCc
Confidence 44555777888889877533
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00014 Score=78.87 Aligned_cols=117 Identities=14% Similarity=0.126 Sum_probs=81.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (246)
T 2uvd_A 54 SDAIAVRADVANAE------DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRF 127 (246)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999853 5555544 79999999996432 2345578999999987777666421
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+..++|++||....... | ....|+.||+..+.+++++.
T Consensus 128 ~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la 169 (246)
T 2uvd_A 128 MMRQRHGRIVNIASVVGVTGN----------P----------------------------GQANYVAAKAGVIGLTKTSA 169 (246)
T ss_dssp HHHHTCEEEEEECCTHHHHCC----------T----------------------------TBHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCHHhcCCC----------C----------------------------CCchHHHHHHHHHHHHHHHH
Confidence 145799999997543210 0 01259999999988887653
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+..++|.+|.
T Consensus 170 ------~e~~~~gi~v~~v~Pg~v~ 188 (246)
T 2uvd_A 170 ------KELASRNITVNAIAPGFIA 188 (246)
T ss_dssp ------HHHGGGTEEEEEEEECSBG
T ss_pred ------HHhhhcCeEEEEEEecccc
Confidence 222 347888888898874
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00013 Score=81.79 Aligned_cols=116 Identities=16% Similarity=0.110 Sum_probs=82.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc-----------hhcHHHHHHHHHHHHHHHHHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF-----------DEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f-----------~~~~~~~~~~NV~GT~nLLelA 611 (1217)
++.++.+|+++++ +++.+++ .+|++||+||.... .+.+...+++|+.|+.++++.+
T Consensus 81 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 154 (296)
T 3k31_A 81 VKLTVPCDVSDAE------SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKA 154 (296)
T ss_dssp CCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CeEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999853 5555543 68999999996532 2345578999999999999999
Q ss_pred Hhc-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 EEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 ~~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
... ..-.++|++||...... .| ....|+.||+..+.+++++
T Consensus 155 ~~~m~~~g~IV~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~l~~~l 196 (296)
T 3k31_A 155 EPLMTNGGSILTLSYYGAEKV----------VP----------------------------HYNVMGVCKAALEASVKYL 196 (296)
T ss_dssp GGGCTTCEEEEEEECGGGTSC----------CT----------------------------TTTHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCEEEEEEehhhccC----------CC----------------------------CchhhHHHHHHHHHHHHHH
Confidence 753 22348999999764321 00 1136999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+..++|-.|.
T Consensus 197 a------~e~~~~gIrvn~v~PG~v~ 216 (296)
T 3k31_A 197 A------VDLGKQQIRVNAISAGPVR 216 (296)
T ss_dssp H------HHHHTTTEEEEEEEECCCC
T ss_pred H------HHHhhcCcEEEEEEECCCc
Confidence 4 223 346777778887774
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00015 Score=81.18 Aligned_cols=118 Identities=19% Similarity=0.169 Sum_probs=85.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +++.++ ..+|++||+||... + .+.++..+++|+.|+.++++.+..
T Consensus 100 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 173 (294)
T 3r3s_A 100 RKAVLLPGDLSDES------FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIP 173 (294)
T ss_dssp CCEEECCCCTTSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46889999999853 454444 37899999999643 1 234557899999999999999976
Q ss_pred c-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 614 M-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 614 ~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
. .+-.++|++||..++... + ....|+.||+..|.+++++.
T Consensus 174 ~~~~~g~Iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la- 214 (294)
T 3r3s_A 174 LLPKGASIITTSSIQAYQPS----------P----------------------------HLLDYAATKAAILNYSRGLA- 214 (294)
T ss_dssp GCCTTCEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred HhhcCCEEEEECChhhccCC----------C----------------------------CchHHHHHHHHHHHHHHHHH-
Confidence 4 122389999998665321 0 01259999999999998764
Q ss_pred cccccccc-cCCCceeEeccCccch
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~e 716 (1217)
.++ ..++.+..++|..|.-
T Consensus 215 -----~e~~~~gI~vn~v~PG~v~t 234 (294)
T 3r3s_A 215 -----KQVAEKGIRVNIVAPGPIWT 234 (294)
T ss_dssp -----HHHGGGTCEEEEEEECSBCS
T ss_pred -----HHHhhcCeEEEEEecCcCcc
Confidence 222 3478888889988853
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00013 Score=80.25 Aligned_cols=115 Identities=15% Similarity=0.093 Sum_probs=81.2
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhc-------CccEEEEcCccccc------------hhcHHHHHHHHHHHHHHHHHHH
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLRE-------DVNIVFHVAATVKF------------DEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~-------~vdvVfH~AA~v~f------------~~~~~~~~~~NV~GT~nLLelA 611 (1217)
..++.+|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 61 ~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 134 (265)
T 1qsg_A 61 DIVLQCDVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC 134 (265)
T ss_dssp CCEEECCTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 368899999853 4555543 68999999996431 1234578999999999999999
Q ss_pred Hhc-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 EEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 ~~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
... .+-.++|++||..++.. .| ....|+.||+..|.+++++
T Consensus 135 ~~~~~~~g~iv~isS~~~~~~----------~~----------------------------~~~~Y~~sK~a~~~~~~~l 176 (265)
T 1qsg_A 135 RSMLNPGSALLTLSYLGAERA----------IP----------------------------NYNVMGLAKASLEANVRYM 176 (265)
T ss_dssp GGGEEEEEEEEEEECGGGTSB----------CT----------------------------TTTHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEcchhhccC----------CC----------------------------CchHHHHHHHHHHHHHHHH
Confidence 763 11248999999754321 00 1125999999999999876
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. .++ ..++.+..++|..|.
T Consensus 177 a------~e~~~~gi~v~~v~PG~v~ 196 (265)
T 1qsg_A 177 A------NAMGPEGVRVNAISAGPIR 196 (265)
T ss_dssp H------HHHTTTTEEEEEEEECCCC
T ss_pred H------HHhhhcCeEEEEEEeCCCc
Confidence 4 222 347888888998774
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1217 | ||||
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.002 |
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 39.7 bits (92), Expect = 0.002
Identities = 32/149 (21%), Positives = 51/149 (34%), Gaps = 30/149 (20%)
Query: 66 EKKVLREDVNIVFHVAATVKFDEHFQ---TAFEINCKGTEKLLKMAEEM--------KNL 114
+ + + V H+AA D E N GT LL++A + KN
Sbjct: 66 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNN 125
Query: 115 DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYT 174
F ++ST + Y L E+E + TE T + Y+
Sbjct: 126 FRFHHISTD-----------EVYGDLPHPDEVENSVTLPLFTETTAYAPS------SPYS 168
Query: 175 LSKNACEQMVRE--KMDKLPLGIVRPSIV 201
SK + + +VR + LP + S
Sbjct: 169 ASKASSDHLVRAWRRTYGLPTIVTNCSNN 197
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1217 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.9 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.88 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.87 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.87 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.86 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.85 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.84 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.83 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.82 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.8 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.79 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.79 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.78 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.78 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.78 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.77 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.74 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.73 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.72 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.63 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.59 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.57 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.56 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.49 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.48 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.46 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.46 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.46 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.43 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.4 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.39 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.38 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.37 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.31 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.3 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.28 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.27 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.27 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.27 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.26 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.25 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.21 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.2 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.2 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.2 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.14 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.1 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.09 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 98.94 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 98.84 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.58 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.51 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 98.44 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 98.43 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 98.17 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 97.95 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.88 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 97.78 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 97.77 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 97.69 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.68 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.58 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 97.57 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.55 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.5 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.49 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.45 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.45 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.45 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.45 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.44 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 97.43 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.42 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.4 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.4 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.37 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.36 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.25 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.25 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 97.21 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.2 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 97.16 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.15 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.14 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.14 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.12 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 97.11 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.1 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.07 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 97.04 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.03 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 96.95 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 96.94 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.94 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.93 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.92 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.88 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 96.86 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 96.68 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.62 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 96.59 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.58 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.57 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.47 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 96.45 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 96.45 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.41 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 96.41 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 96.39 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 96.35 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 96.31 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 96.28 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 96.22 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.19 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 96.14 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.12 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 96.11 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 96.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 95.97 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 95.93 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 95.93 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 95.92 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 95.9 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 95.88 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 95.85 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 95.82 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 95.81 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 95.79 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 95.77 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 95.74 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 95.74 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 95.67 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 95.67 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 95.66 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 95.63 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 95.63 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 95.61 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 95.58 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 95.49 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 95.49 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 95.47 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 95.46 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 95.36 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 95.33 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 95.14 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 95.13 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 95.12 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 95.07 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 95.03 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 95.01 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 95.01 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 94.73 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 94.72 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 94.64 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 94.37 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 94.2 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 93.82 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 93.76 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 93.59 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 93.45 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 93.41 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 93.4 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 93.37 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 93.13 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 92.49 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 92.45 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 92.4 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 92.03 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 91.94 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 91.85 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 91.52 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 91.42 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 91.01 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 89.16 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 89.14 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 88.18 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 87.89 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 87.56 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 87.33 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 87.14 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 85.56 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 81.76 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=1e-23 Score=240.84 Aligned_cols=242 Identities=12% Similarity=0.032 Sum_probs=178.6
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHH------------hhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc-
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDR------------LRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDV- 74 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~------------Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V- 74 (1217)
-+||+.|.-|..+.++|.+...+ ..+++ +..+......+++++.||+++. ++++.+++++
T Consensus 5 LITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~ 78 (357)
T d1db3a_ 5 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT------SNLTRILREVQ 78 (357)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCH------HHHHHHHHHHC
T ss_pred EEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCH------HHHHHHHhccC
Confidence 37899999999999999885321 11121 1122223456899999999998 8898888765
Q ss_pred -cEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccc--cccccccCCCCChHHH
Q psy13944 75 -NIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 75 -DiViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~dp~~~ 146 (1217)
|+|||+||.... .+.+...+++|+.||.+||++|++. ++.++|||+||+.+||... .++|+....|
T Consensus 79 ~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P------ 152 (357)
T d1db3a_ 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYP------ 152 (357)
T ss_dssp CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCC------
T ss_pred CCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCC------
Confidence 999999998643 3456678999999999999999875 3445899999999998643 2444321111
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHH
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYV 224 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~ 224 (1217)
-|.|+.||++||++++.++ .+++++++||++||||+..+.. ........+.
T Consensus 153 -----------------------~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~----~~~~i~~~~~ 205 (357)
T d1db3a_ 153 -----------------------RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETF----VTRKITRAIA 205 (357)
T ss_dssp -----------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS----HHHHHHHHHH
T ss_pred -----------------------CChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCC----CchHHHHHHH
Confidence 1679999999999999987 5899999999999999653311 1112234444
Q ss_pred HHhcCce-eEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeec
Q psy13944 225 AVGLGIM-RTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEI 303 (1217)
Q Consensus 225 ~~~~G~l-~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI 303 (1217)
.+..|.. ....|++++.+|++||||+|++++.++... .++.||+
T Consensus 206 ~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~-----------------------------------~~~~yni 250 (357)
T d1db3a_ 206 NIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE-----------------------------------QPEDFVI 250 (357)
T ss_dssp HHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS-----------------------------------SCCCEEE
T ss_pred HHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC-----------------------------------CCCeEEE
Confidence 5555543 446688999999999999999998776431 1568999
Q ss_pred cCC-ccCchHHHHHHHHhhchh
Q psy13944 304 NHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 304 ~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
++| ++++.|+++.+++.+|..
T Consensus 251 ~sg~~~s~~~~~~~~~~~~g~~ 272 (357)
T d1db3a_ 251 ATGVQYSVRQFVEMAAAQLGIK 272 (357)
T ss_dssp CCCCCEEHHHHHHHHHHTTTEE
T ss_pred CCCCceehHHHHHHHHHHhCCc
Confidence 999 999999999999999864
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.88 E-value=2.7e-22 Score=225.13 Aligned_cols=240 Identities=16% Similarity=0.110 Sum_probs=188.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hh------HHHh-------hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DA------FDRL-------RKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDV 74 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~v------fd~L-------r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V 74 (1217)
-+||+.|.-|..+.++|.+.... .. +|.+ .........++.++.+|+.+. .........+
T Consensus 4 lItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~ 77 (322)
T d1r6da_ 4 LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDA------GLLARELRGV 77 (322)
T ss_dssp EEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCH------HHHHHHTTTC
T ss_pred EEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccc------hhhhcccccc
Confidence 36899999999999999884221 11 1100 001123456899999999998 7778888899
Q ss_pred cEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHH
Q psy13944 75 NIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 75 DiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~ 149 (1217)
|+|+|+|+..... ......+++|+.||.+++++|++. ++++|||+||+.+||.... ++|+....|
T Consensus 78 d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p--------- 147 (322)
T d1r6da_ 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSGSWTESSPLEP--------- 147 (322)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSSCBCTTSCCCC---------
T ss_pred ceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceeecCCCCCCCCCCCCCCC---------
Confidence 9999999876432 344568899999999999999985 7899999999999997542 444322111
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
-+.|+.||.++|.+++.++ .+++++++||++||||++.+ + .....++..+.
T Consensus 148 --------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~-----~--~~i~~~i~~~~ 200 (322)
T d1r6da_ 148 --------------------NSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-----E--KLIPLFVTNLL 200 (322)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-----T--SHHHHHHHHHH
T ss_pred --------------------CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc-----C--cHHHHHHHHHH
Confidence 1579999999999999887 68999999999999987543 1 12456777778
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|....+++++++.+||+||+|+|++++.++.+... ++.||++++
T Consensus 201 ~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~----------------------------------~~~~ni~~~~ 246 (322)
T d1r6da_ 201 DGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA----------------------------------GEIYHIGGGL 246 (322)
T ss_dssp TTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT----------------------------------TCEEEECCCC
T ss_pred cCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC----------------------------------CCeeEEeecc
Confidence 887777889999999999999999999998875443 678999999
Q ss_pred ccCchHHHHHHHHhhchhh
Q psy13944 307 NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~~ 325 (1217)
+++..|+++.+++.+|.+.
T Consensus 247 ~~s~~e~~~~i~~~~~~~~ 265 (322)
T d1r6da_ 247 ELTNRELTGILLDSLGADW 265 (322)
T ss_dssp EEEHHHHHHHHHHHHTCCG
T ss_pred cchhHHHHHHHHHHhCCCc
Confidence 9999999999999998763
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.87 E-value=5.4e-22 Score=227.10 Aligned_cols=249 Identities=18% Similarity=0.112 Sum_probs=185.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh--HHHhh-----h--cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA--FDRLR-----K--ENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIV 77 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v--fd~Lr-----~--~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiV 77 (1217)
-+||+.|.-|..+.+.|.+.....+ .|++. + .......+++++.||++++ +.+..+++ ++|+|
T Consensus 4 LItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~l~~~~~~~~~d~V 77 (361)
T d1kewa_ 4 LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS------AEITRIFEQYQPDAV 77 (361)
T ss_dssp EEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCH------HHHHHHHHHHCCSEE
T ss_pred EEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCH------HHHHHHHHhCCCCEE
Confidence 4789999999999999987544322 11110 0 0112245899999999998 78887765 57999
Q ss_pred EEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcC--------CCCeEEEEcCccccccccc--ccccccCCCCChH
Q psy13944 78 FHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMK--------NLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHI 144 (1217)
Q Consensus 78 iH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~--------~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~ 144 (1217)
||+||..+.. ..+..++++|+.||.+++++|+++. +.++|||+||+.+||.... ..|.....|..
T Consensus 78 ihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~-- 155 (361)
T d1kewa_ 78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF-- 155 (361)
T ss_dssp EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB--
T ss_pred EECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCc--
Confidence 9999986532 2345689999999999999998752 3469999999999997643 22221111110
Q ss_pred HHHHHhhcCCcccccccccccCCCCC-ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMP-NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
.+ .....| +.|+.||.++|+++..+. .+++++++||++||||+..+ ++ ....
T Consensus 156 ----------~e--------~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~~--~i~~ 210 (361)
T d1kewa_ 156 ----------TE--------TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-----EK--LIPL 210 (361)
T ss_dssp ----------CT--------TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-----TS--HHHH
T ss_pred ----------cc--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc-----Cc--HHHH
Confidence 00 001112 679999999999999887 78999999999999986533 22 2356
Q ss_pred HHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcccee
Q psy13944 222 MYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNY 301 (1217)
Q Consensus 222 li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Y 301 (1217)
++..+..|....++++|++.+||+||+|+|+|++.++..... ++.|
T Consensus 211 ~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~----------------------------------~~~~ 256 (361)
T d1kewa_ 211 VILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA----------------------------------GETY 256 (361)
T ss_dssp HHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT----------------------------------TCEE
T ss_pred HHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCC----------------------------------CCeE
Confidence 777788888777889999999999999999999998875443 5689
Q ss_pred eccCC-ccCchHHHHHHHHhhchh
Q psy13944 302 EINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 302 nI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
||+++ +.+..|+++.+.+.++..
T Consensus 257 Ni~s~~~~s~~~~~~~i~~~~~~~ 280 (361)
T d1kewa_ 257 NIGGHNEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp EECCCCEEEHHHHHHHHHHHHHHH
T ss_pred EECCCCCcchHHHHhHhhhhcccc
Confidence 99999 899999999999887654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=7.8e-22 Score=221.09 Aligned_cols=239 Identities=15% Similarity=0.081 Sum_probs=176.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhh----cCc--ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRK----ENA--NFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHV 80 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~----~~p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~ 80 (1217)
.-+||+.|.-|..+.++|.+...+ ..++++.. ..+ ....++.+..+|+.+. ++.++|+|||+
T Consensus 4 IlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----------~~~~~d~Vihl 72 (312)
T d2b69a1 4 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----------LYIEVDQIYHL 72 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----------CCCCCSEEEEC
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH-----------HHcCCCEEEEC
Confidence 347999999999999999874222 11221111 111 1234566777776654 45689999999
Q ss_pred CccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCc
Q psy13944 81 AATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 81 AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
||.++. .......+++|+.||.+||++|++. ++ +|||+||..|||.... +.|+.+..
T Consensus 73 Aa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~~~~~~~~e~~~~~---------------- 134 (312)
T d2b69a1 73 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQSEDYWGH---------------- 134 (312)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBCTTCCCB----------------
T ss_pred cccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecCCCCCCCCccccCC----------------
Confidence 998653 3456678999999999999999985 43 8999999999986532 34432110
Q ss_pred ccccccccccCCCCC-ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCcee
Q psy13944 156 TELTVLNDILIKPMP-NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMR 232 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~ 232 (1217)
.+| ..| +.|+.||.++|.++..++ .+++++++||++||||+..+.. ......++..+..|...
T Consensus 135 -----~~~----~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-----~~~i~~~i~~~~~g~~i 200 (312)
T d2b69a1 135 -----VNP----IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMND-----GRVVSNFILQALQGEPL 200 (312)
T ss_dssp -----CCS----SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTC-----CCHHHHHHHHHHHTCCE
T ss_pred -----CCC----CCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCC-----ccHHHHHHHHHHcCCCe
Confidence 000 012 569999999999999887 6999999999999999764421 12335677777888877
Q ss_pred EEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCch
Q psy13944 233 TVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTT 311 (1217)
Q Consensus 233 ~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~ 311 (1217)
.+++++.+.+||+||+|+|++++.++... . +..||++++ +.+..
T Consensus 201 ~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~----------------------------------~~~~n~~~~~~~~~~ 245 (312)
T d2b69a1 201 TVYGSGSQTRAFQYVSDLVNGLVALMNSN-V----------------------------------SSPVNLGNPEEHTIL 245 (312)
T ss_dssp EEESSSCCEEECEEHHHHHHHHHHHHTSS-C----------------------------------CSCEEESCCCEEEHH
T ss_pred EEeCCCCeeEccEEHHHHHHHHHHHHhhc-c----------------------------------CCceEecCCcccchh
Confidence 88899999999999999999998776422 1 457999999 99999
Q ss_pred HHHHHHHHhhchh
Q psy13944 312 NHVNYIKQNIKEK 324 (1217)
Q Consensus 312 el~~~ia~~~g~~ 324 (1217)
++++.+++.+|.+
T Consensus 246 ~~~~~i~~~~~~~ 258 (312)
T d2b69a1 246 EFAQLIKNLVGSG 258 (312)
T ss_dssp HHHHHHHHHHTCC
T ss_pred hHHHHHHHHhCCC
Confidence 9999999999865
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=2.1e-21 Score=219.49 Aligned_cols=252 Identities=14% Similarity=0.071 Sum_probs=180.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcC--------cccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKEN--------ANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNI 76 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~--------p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDi 76 (1217)
.-+||+.+.-|..+..+|.+...+ .+.|++.... .....++.++.||+++. +.+..+++ ++|+
T Consensus 3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~l~~~~~~~~~d~ 76 (338)
T d1udca_ 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE------ALMTEILHDHAIDT 76 (338)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCH------HHHHHHHHHTTCSE
T ss_pred EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCH------HHHHHHHhccCCCE
Confidence 357999999999999999875322 1122111110 11235799999999998 88888776 7899
Q ss_pred EEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhh
Q psy13944 77 VFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 77 ViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~ 151 (1217)
|||+||..... +.....+++|+.||.++|++|++. ++++|||+||..+|+.... ..|...
T Consensus 77 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy~~~~~~~~~e~~~-------------- 141 (338)
T d1udca_ 77 VIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDQPKIPYVESFP-------------- 141 (338)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSSBCTTSC--------------
T ss_pred EEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEEccccccccccccc--------------
Confidence 99999986543 345688999999999999999996 7999999999999976432 111110
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccc--cchhHH-HHHH
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLTA-MYVA 225 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~~-li~~ 225 (1217)
.....+.|+.+|..+|+++.++. .+++++|+||+.|||+...+.-|.... ...... ++..
T Consensus 142 --------------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~ 207 (338)
T d1udca_ 142 --------------TGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQV 207 (338)
T ss_dssp --------------CCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHH
T ss_pred --------------cCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHH
Confidence 00112679999999999998654 689999999999999976554332111 111122 2222
Q ss_pred Hhc-CceeEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcc
Q psy13944 226 VGL-GIMRTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLD 298 (1217)
Q Consensus 226 ~~~-G~l~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g 298 (1217)
+.. +....+.| ++.+.+||+||+|+|.++..+...... . ..+
T Consensus 208 ~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~----~---------------------------~~~ 256 (338)
T d1udca_ 208 AVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN----K---------------------------PGV 256 (338)
T ss_dssp HTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTT----C---------------------------CEE
T ss_pred HhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhcccccccccc----c---------------------------cCc
Confidence 222 23444544 478899999999999998877765444 1 126
Q ss_pred ceeeccCC-ccCchHHHHHHHHhhchhh
Q psy13944 299 VNYEINHG-NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 299 ~~YnI~sg-~~s~~el~~~ia~~~g~~~ 325 (1217)
+.||++++ ++++.|+++.+.+.+|.+.
T Consensus 257 ~i~Ni~~~~~~si~e~~~~i~~~~g~~~ 284 (338)
T d1udca_ 257 HIYNLGAGVGNSVLDVVNAFSKACGKPV 284 (338)
T ss_dssp EEEEESCSSCEEHHHHHHHHHHHHTSCC
T ss_pred ceeeecCCCCCcHHHHHHHHHHHHCCCC
Confidence 78999998 8999999999999998653
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=6.7e-21 Score=215.19 Aligned_cols=246 Identities=14% Similarity=0.056 Sum_probs=190.0
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC------------hhHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD------------DAFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLREDV 74 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~------------~vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V 74 (1217)
.-+||+.|.-|..+.++|.+.... .-.+.++.... ....++.++.+|+.+. ..........
T Consensus 19 iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~------~~~~~~~~~~ 92 (341)
T d1sb8a_ 19 WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL------DDCNNACAGV 92 (341)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH------HHHHHHHTTC
T ss_pred EEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccc------cccccccccc
Confidence 347999999999999999875321 11222222221 2346799999999988 7777778889
Q ss_pred cEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHH
Q psy13944 75 NIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 75 DiViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~ 149 (1217)
+.|+|+||.... .+.....+++|+.||.+|+++|++. ++++|||+||+.+||.... ++|+....|
T Consensus 93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p--------- 162 (341)
T d1sb8a_ 93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPKVEDTIGKP--------- 162 (341)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCCC---------
T ss_pred cccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceeeCCCCCCCccCCCCCCC---------
Confidence 999999997653 3455678999999999999999995 7899999999999996542 444332211
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHh
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVG 227 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~ 227 (1217)
.+.|+.||.++|+++..++ .+++++|+||++|||+...|...+ .. ....++..+.
T Consensus 163 --------------------~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~-~~--~i~~~~~~~~ 219 (341)
T d1sb8a_ 163 --------------------LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAY-AA--VIPKWTSSMI 219 (341)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTT-CC--HHHHHHHHHH
T ss_pred --------------------CCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCch-hh--hHHHHHHHHH
Confidence 2679999999999998877 689999999999999987653221 11 2235566777
Q ss_pred cCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 228 LGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 228 ~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
.|....+.+++.+.+|++||+|+|.|++.++..... . .++.|+++++
T Consensus 220 ~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~----~----------------------------~~~~~~~~~~~ 267 (341)
T d1sb8a_ 220 QGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD----A----------------------------RNQVYNIAVGG 267 (341)
T ss_dssp HTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG----G----------------------------CSEEEEESCSC
T ss_pred cCCceEEcCCCCEEEEEEEEeccchhhhhhhhcccc----c----------------------------cceeeeecccc
Confidence 787778889999999999999999999887765433 1 2678999998
Q ss_pred ccCchHHHHHHHHhhchh
Q psy13944 307 NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~ 324 (1217)
..++.|+++.+++.++.+
T Consensus 268 ~~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 268 RTSLNQLFFALRDGLAEN 285 (341)
T ss_dssp CEEHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHhccc
Confidence 899999999999988865
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.84 E-value=2.2e-20 Score=212.43 Aligned_cols=251 Identities=14% Similarity=-0.019 Sum_probs=185.9
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhc-CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKE-NANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~-~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~ 85 (1217)
.-+||+.+.-|..+.++|.+--.. ..+|+.+.. .+.......+..+|+.+. +++..+++++|+|||+|+...
T Consensus 18 ILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~d~Vih~a~~~~ 91 (363)
T d2c5aa1 18 ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMG 91 (363)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCC
T ss_pred EEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhH------HHHHHHhhcCCeEeecccccc
Confidence 458999999999999999874322 223332222 123455678899999987 788888899999999998765
Q ss_pred c----ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 86 F----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 86 f----~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
. ..........|+.||.+++++|++ .++++|||+||+.+++.... .+|..... ....
T Consensus 92 ~~~~~~~~~~~~~~~n~~gt~~ll~~~~~-~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~----------------~e~~ 154 (363)
T d2c5aa1 92 GMGFIQSNHSVIMYNNTMISFNMIEAARI-NGIKRFFYASSACIYPEFKQLETTNVSLKE----------------SDAW 154 (363)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEEGGGSCGGGSSSSSSCEECG----------------GGGS
T ss_pred cccccccccccccccccchhhHHHHhHHh-hCcccccccccccccccccccccccccccc----------------ccCC
Confidence 4 456778899999999999999999 58999999999999986542 11111000 0000
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeC
Q psy13944 160 VLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQN 237 (1217)
Q Consensus 160 ~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~ 237 (1217)
+ ....+.|+.||.++|++++.+. .+++++++||++|||+...+...+ ..............+.....+++
T Consensus 155 ~------~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~ 226 (363)
T d2c5aa1 155 P------AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGR--EKAPAAFCRKAQTSTDRFEMWGD 226 (363)
T ss_dssp S------BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSC--CCHHHHHHHHHHHCSSCEEEESC
T ss_pred c------CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccc--cccccccccccccccccccccCC
Confidence 0 0112579999999999999887 699999999999999976443222 22223344444555566677889
Q ss_pred CCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHH
Q psy13944 238 TSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNY 316 (1217)
Q Consensus 238 ~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ 316 (1217)
+.+.+||||++|+|++++.++... . ++.||++++ +++..++++.
T Consensus 227 g~~~rd~i~v~D~~~~~~~~~~~~-~----------------------------------~~~~ni~~~~~~s~~~l~~~ 271 (363)
T d2c5aa1 227 GLQTRSFTFIDECVEGVLRLTKSD-F----------------------------------REPVNIGSDEMVSMNEMAEM 271 (363)
T ss_dssp SCCEECCEEHHHHHHHHHHHHHSS-C----------------------------------CSCEEECCCCCEEHHHHHHH
T ss_pred CCeEEEEeehhHHHHHHHHHHhCC-C----------------------------------CCeEEEecCCcccHHHHHHH
Confidence 999999999999999998776421 1 567999999 9999999999
Q ss_pred HHHhhchh
Q psy13944 317 IKQNIKEK 324 (1217)
Q Consensus 317 ia~~~g~~ 324 (1217)
+++.+|.+
T Consensus 272 i~~~~g~~ 279 (363)
T d2c5aa1 272 VLSFEEKK 279 (363)
T ss_dssp HHHTTTCC
T ss_pred HHHHhCCC
Confidence 99988765
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.83 E-value=3.1e-20 Score=210.24 Aligned_cols=253 Identities=15% Similarity=0.105 Sum_probs=183.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH--HHh------hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF--DRL------RKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf--d~L------r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiVi 78 (1217)
.-+||+.|.-|..+.++|.+-... .+. |.+ .........++.++.||+.+. +.+..++..++.|+
T Consensus 5 ILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~------~~~~~~~~~~~~v~ 78 (346)
T d1oc2a_ 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADA------ELVDKLAAKADAIV 78 (346)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCH------HHHHHHHTTCSEEE
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCH------HHHHHHHhhhhhhh
Confidence 347999999999999999875322 121 111 111122346899999999998 88999999999999
Q ss_pred EcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCc
Q psy13944 79 HVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 79 H~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
|+|+..... ......+++|+.||.++++.|++.. .++|++||+.+||.... .|..+..+..+ .
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~-~~~~~~~~~~~-----------~ 144 (346)
T d1oc2a_ 79 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPL-REDLPGHGEGP-----------G 144 (346)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCC-GGGSTTTTCST-----------T
T ss_pred hhhhcccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCc-cccccccccCc-----------c
Confidence 999987542 2345688999999999999999864 58999999999986432 12111111000 0
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeE
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRT 233 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~ 233 (1217)
+.....+ .....+.|+.||.++|++++.++ .+++++|+||++||||+..+. .....++.....|....
T Consensus 145 ~~~~e~~---~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-------~~~~~~i~~~~~~~~~~ 214 (346)
T d1oc2a_ 145 EKFTAET---NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-------KFIPRQITNILAGIKPK 214 (346)
T ss_dssp SSBCTTS---CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-------SHHHHHHHHHHHTCCCE
T ss_pred cccccCC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-------chhHHHHHHHHcCCcee
Confidence 0000000 11122779999999999999877 689999999999999865331 12345556666777778
Q ss_pred EeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchH
Q psy13944 234 VYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTN 312 (1217)
Q Consensus 234 i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~e 312 (1217)
+++++++.+|++||+|+|++++.++.+... +..|+++++ ..+..+
T Consensus 215 i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~ 260 (346)
T d1oc2a_ 215 LYGEGKNVRDWIHTNDHSTGVWAILTKGRM----------------------------------GETYLIGADGEKNNKE 260 (346)
T ss_dssp EETTSCCEEECEEHHHHHHHHHHHHHHCCT----------------------------------TCEEEECCSCEEEHHH
T ss_pred EeCCCCccccccchhhHHHHHHHHHhhccc----------------------------------CccccccccccccchH
Confidence 889999999999999999999887765444 567888888 899999
Q ss_pred HHHHHHHhhchh
Q psy13944 313 HVNYIKQNIKEK 324 (1217)
Q Consensus 313 l~~~ia~~~g~~ 324 (1217)
+++.+.+.++..
T Consensus 261 ~~~~i~~~~~~~ 272 (346)
T d1oc2a_ 261 VLELILEKMGQP 272 (346)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHhCCC
Confidence 999999888764
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=4.4e-20 Score=208.08 Aligned_cols=257 Identities=10% Similarity=0.008 Sum_probs=187.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh--HHHhhhcC--cccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA--FDRLRKEN--ANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATV 84 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v--fd~Lr~~~--p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v 84 (1217)
-+||+.+.-|..+.++|.+.-...+ +|+.+... .....+++++.||+++.. +..+.+.+++|+|||+||..
T Consensus 4 LITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~-----~~~~~~~~~~d~Vih~a~~~ 78 (342)
T d2blla1 4 LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIA 78 (342)
T ss_dssp EEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCC
T ss_pred EEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChH-----HHHHHHHhCCCccccccccc
Confidence 4689999999999999976543222 22222111 122468999999999871 23344667899999999987
Q ss_pred Ccc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 85 KFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 85 ~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
... .....++.+|+.||.+++++|.+. + .+++|+||+.+|+.... .+|.....+.+
T Consensus 79 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~----------------- 139 (342)
T d2blla1 79 TPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVG----------------- 139 (342)
T ss_dssp CHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCC-----------------
T ss_pred cccccccCCccccccccccccccccccccc-c-cccccccccccccccccccccccccccccc-----------------
Confidence 543 334578999999999999999985 4 36789999999886542 22211111000
Q ss_pred ccccccCCCCC-ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccc-cchhHHHHHHHhcCceeEEe
Q psy13944 160 VLNDILIKPMP-NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKG-MNGLTAMYVAVGLGIMRTVY 235 (1217)
Q Consensus 160 ~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn-~~g~~~li~~~~~G~l~~i~ 235 (1217)
....| +.|+.||.++|+++..++ .+++++|+||+.+||+...+..|-... ......++..+..|....++
T Consensus 140 ------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 213 (342)
T d2blla1 140 ------PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI 213 (342)
T ss_dssp ------CTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEG
T ss_pred ------ccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCcccc
Confidence 00112 569999999999999887 689999999999999976554332222 22345777788888888889
Q ss_pred eCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC--ccCchHH
Q psy13944 236 QNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG--NYDTTNH 313 (1217)
Q Consensus 236 g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg--~~s~~el 313 (1217)
+++++.+|++||+|+|++++.++.+... . ..++.|||+++ .+++.++
T Consensus 214 ~~g~~~r~~i~v~D~~~a~~~~~~~~~~----~---------------------------~~g~~~Nig~~~~~~t~~~l 262 (342)
T d2blla1 214 DGGKQKRCFTDIRDGIEALYRIIENAGN----R---------------------------CDGEIINIGNPENEASIEEL 262 (342)
T ss_dssp GGSCCEEECEEHHHHHHHHHHHHHCGGG----T---------------------------TTTEEEEECCTTSEEEHHHH
T ss_pred CCCCeeeeecccccccceeeeehhhccc----c---------------------------CCCeEEEEecccchhHHHHH
Confidence 9999999999999999999999876543 1 13789999876 5799999
Q ss_pred HHHHHHhhchhhh
Q psy13944 314 VNYIKQNIKEKFI 326 (1217)
Q Consensus 314 ~~~ia~~~g~~~~ 326 (1217)
++.+.+.+|....
T Consensus 263 ~~~i~~~~~~~~~ 275 (342)
T d2blla1 263 GEMLLASFEKHPL 275 (342)
T ss_dssp HHHHHHHHHTCTT
T ss_pred HHHHHHHhCCCcc
Confidence 9999999987643
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.80 E-value=1.1e-19 Score=205.61 Aligned_cols=259 Identities=14% Similarity=0.064 Sum_probs=179.1
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-hhH--------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEE
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-DAF--------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVF 78 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-~vf--------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiVi 78 (1217)
+||+.+.-|..+.++|.+...+ .++ +.+.+.......+++++.+|+++. ++++.+++ ++|+||
T Consensus 6 VTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~------~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 6 VTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR------KGLEKVFKEYKIDSVI 79 (347)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCH------HHHHHHHHHSCCCEEE
T ss_pred EeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCH------HHHHHHHhccCCCEEE
Confidence 6899999999999999884321 112 222222222346789999999998 88887765 789999
Q ss_pred EcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCc
Q psy13944 79 HVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSH 155 (1217)
Q Consensus 79 H~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d 155 (1217)
|+||.... .+....+..+|+.||.+|+++|++. ++++|||+||..+||......+. .+ .++
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vyg~~~~~~~~---~~------------~~e 143 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNM---IP------------IPE 143 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTC---CS------------BCT
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeeecCcccCCCC---Cc------------ccc
Confidence 99998643 3455678899999999999999984 88999999999999875421100 00 001
Q ss_pred ccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccc--cchhHHHHHHHhc-
Q psy13944 156 TELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLTAMYVAVGL- 228 (1217)
Q Consensus 156 ~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~~li~~~~~- 228 (1217)
+ ++ ....+.|+.||.++|++++++. .+++++++||+.|||+...+..|.... .......+.....
T Consensus 144 ~-----~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 215 (347)
T d1z45a2 144 E-----CP---LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVG 215 (347)
T ss_dssp T-----SC---CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTT
T ss_pred c-----cC---CCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhc
Confidence 0 00 0112679999999999998864 689999999999999876554332221 1122333333332
Q ss_pred -CceeEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcccee
Q psy13944 229 -GIMRTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNY 301 (1217)
Q Consensus 229 -G~l~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Y 301 (1217)
+....+.| ++...+|++++.+++.+++.++..... .+. ....++.|
T Consensus 216 ~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----~~~-----------------------~~~~~~~~ 268 (347)
T d1z45a2 216 RREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEA----YNE-----------------------NEGLCREW 268 (347)
T ss_dssp SSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHH----SCT-----------------------TCCEEEEE
T ss_pred CCCCeEEeCCCccccCCceeeeeeeeeccccccccccccccc----ccc-----------------------cccccccc
Confidence 22223334 345678899999999999888776544 110 01247789
Q ss_pred eccCC-ccCchHHHHHHHHhhchhh
Q psy13944 302 EINHG-NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 302 nI~sg-~~s~~el~~~ia~~~g~~~ 325 (1217)
|++++ ++++.|+++.+.+.+|.+.
T Consensus 269 Ni~~~~~~s~~e~~~~i~~~~~~~~ 293 (347)
T d1z45a2 269 NLGSGKGSTVFEVYHAFCKASGIDL 293 (347)
T ss_dssp EESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred eecCCCcccHHHHHHHHHHHHCCCC
Confidence 99999 9999999999999998764
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.79 E-value=2.1e-19 Score=200.18 Aligned_cols=239 Identities=13% Similarity=-0.029 Sum_probs=177.8
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhH-----------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--Ccc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAF-----------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVN 75 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vf-----------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VD 75 (1217)
-+||+.|.-|..+.++|.+.. .+++ +++... ....+++++.+|+++. +.+..++. ..+
T Consensus 4 LItG~tGfiG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~ 74 (321)
T d1rpna_ 4 LVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLREL--GIEGDIQYEDGDMADA------CSVQRAVIKAQPQ 74 (321)
T ss_dssp EEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHT--TCGGGEEEEECCTTCH------HHHHHHHHHHCCS
T ss_pred EEECCCCHHHHHHHHHHHHCc-CEEEEEECCCCcccHHHHHHh--cccCCcEEEEccccCh------HHhhhhhcccccc
Confidence 478999999999999997742 2222 222221 2345789999999998 77766554 357
Q ss_pred EEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHh
Q psy13944 76 IVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 76 iViH~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~ 150 (1217)
+|+|+|+.... ......+++.|+.||.++|++|++.+..++|+++||+.++|.... .+|+.+..
T Consensus 75 ~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~----------- 143 (321)
T d1rpna_ 75 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY----------- 143 (321)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC-----------
T ss_pred ccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcc-----------
Confidence 89999887643 345678899999999999999999877779999999998876442 33332111
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhc
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL 228 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~ 228 (1217)
..+.|+.||.++|+++..++ .+++++++||+++|||...+. +. ......++.....
T Consensus 144 ------------------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~--~~--~~~i~~~~~~~~~ 201 (321)
T d1rpna_ 144 ------------------PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIE--FV--TRKVTDAVARIKL 201 (321)
T ss_dssp ------------------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT--SH--HHHHHHHHHHHHT
T ss_pred ------------------ccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCcccc--cc--HHHHHHHHHHHHh
Confidence 12679999999999999887 789999999999999864321 00 1122344445555
Q ss_pred Cc-eeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-
Q psy13944 229 GI-MRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG- 306 (1217)
Q Consensus 229 G~-l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg- 306 (1217)
|. .....+++++.+||+||+|+|++++.++.+.. +..||++++
T Consensus 202 ~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~-----------------------------------~~~~ni~~~~ 246 (321)
T d1rpna_ 202 GKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-----------------------------------ADDYVVATGV 246 (321)
T ss_dssp TSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-----------------------------------CCCEEECCSC
T ss_pred CCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC-----------------------------------cCCceecccc
Confidence 43 44567899999999999999999998876432 356899988
Q ss_pred ccCchHHHHHHHHhhchh
Q psy13944 307 NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 307 ~~s~~el~~~ia~~~g~~ 324 (1217)
..+..++++.+.+..|..
T Consensus 247 ~~s~~~~~~~~~~~~~~~ 264 (321)
T d1rpna_ 247 TTTVRDMCQIAFEHVGLD 264 (321)
T ss_dssp EEEHHHHHHHHHHTTTCC
T ss_pred cceehhhhHHHHHHhCCC
Confidence 899999999999998865
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=6.5e-19 Score=198.92 Aligned_cols=254 Identities=15% Similarity=0.096 Sum_probs=179.7
Q ss_pred CcccCCCCCCcccHHHHHHHHhcCh---------------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADD---------------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~---------------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~ 72 (1217)
.-+||+.+.-|..+.++|.+.-... ..+.++........++.++.+|+++. +.+..++.
T Consensus 5 ILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~l~~~~~ 78 (346)
T d1ek6a_ 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ------GALQRLFK 78 (346)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH------HHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccc------cccccccc
Confidence 4579999999999999998742221 01122211122346899999999998 78877664
Q ss_pred --CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 73 --DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 73 --~VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
.+++|+|+||..+.. ..+...+++|+.||.+++++|++ .++++|+|+||+.+++...........
T Consensus 79 ~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~-~~v~~~i~~ss~~~~~~~~~~~~~~~~--------- 148 (346)
T d1ek6a_ 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA-HGVKNLVFSSSATVYGNPQYLPLDEAH--------- 148 (346)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEEEGGGGCSCSSSSBCTTS---------
T ss_pred ccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhh-cCcccccccccceeeeccccccccccc---------
Confidence 456899999986532 23457899999999999999998 489999999999998875421110000
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEecceeccCCCCCCcccccc--cchhHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIVMPVVEEPCPMWVKG--MNGLTAM 222 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV~G~~~eP~pGWidn--~~g~~~l 222 (1217)
......+.|+.+|..+|+.+.+++ .+++.+++||+++||+...+..|+... .......
T Consensus 149 -----------------~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~ 211 (346)
T d1ek6a_ 149 -----------------PTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPY 211 (346)
T ss_dssp -----------------CCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH
T ss_pred -----------------cccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHH
Confidence 011223679999999999998864 689999999999999976544332221 1111222
Q ss_pred H--HHHhcCceeEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhh
Q psy13944 223 Y--VAVGLGIMRTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESI 294 (1217)
Q Consensus 223 i--~~~~~G~l~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~ 294 (1217)
+ .....+....+.+ ++.+.+||+||+|+|+++..++..... .
T Consensus 212 ~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~----~-------------------------- 261 (346)
T d1ek6a_ 212 VSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE----Q-------------------------- 261 (346)
T ss_dssp HHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT----T--------------------------
T ss_pred HHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhcccccc----c--------------------------
Confidence 2 2333444444433 567889999999999999888766544 1
Q ss_pred hhccceeeccCC-ccCchHHHHHHHHhhchhh
Q psy13944 295 KKLDVNYEINHG-NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 295 ~~~g~~YnI~sg-~~s~~el~~~ia~~~g~~~ 325 (1217)
..++.||++++ +.++.|+++.+++.+|.+.
T Consensus 262 -~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~ 292 (346)
T d1ek6a_ 262 -CGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292 (346)
T ss_dssp -CCEEEEEECCSCCEEHHHHHHHHHHHHCSCC
T ss_pred -cCceEEEeCCCCcccHHHHHHHHHHHhCCCC
Confidence 13678999999 9999999999999998763
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.78 E-value=5.4e-19 Score=203.23 Aligned_cols=262 Identities=14% Similarity=0.026 Sum_probs=178.6
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHH------------------------HhhhcCcccCCCeEEEEccCCCCCCCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFD------------------------RLRKENANFTERIVVLTADLQSDGLGL 62 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd------------------------~Lr~~~p~~~~kI~~V~GDl~d~~LGL 62 (1217)
.-+||+.|.-|..+.++|.+.... .++| .+.+-.....++++++.|||++.
T Consensus 4 ILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---- 79 (393)
T d1i24a_ 4 VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF---- 79 (393)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH----
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH----
Confidence 347999999999999999874211 0111 11110011235799999999998
Q ss_pred CHHHHHHhcCC--ccEEEEcCccCCccc------CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc-cc
Q psy13944 63 DEKEKKVLRED--VNIVFHVAATVKFDE------HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK-IE 133 (1217)
Q Consensus 63 s~edl~~L~~~--VDiViH~AA~v~f~e------~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~-I~ 133 (1217)
+.++.++++ +|+|||+||...... ....++.+|+.||.++|++|++....+.|+++||+.+++.... .+
T Consensus 80 --~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~ 157 (393)
T d1i24a_ 80 --EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIE 157 (393)
T ss_dssp --HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBC
T ss_pred --HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccc
Confidence 888888875 599999999764321 2336789999999999999999866678899999888876442 22
Q ss_pred ccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcc
Q psy13944 134 EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 134 E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
|...... ++......+ ......+.|+.||++||.++..+. .+++++++||++|||+...+...
T Consensus 158 ~~~~~~~--------------~~~~~~~~~-~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~ 222 (393)
T d1i24a_ 158 EGYITIT--------------HNGRTDTLP-YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEM 222 (393)
T ss_dssp SSEEEEE--------------ETTEEEEEE-CCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGG
T ss_pred ccccccc--------------ccccccccc-cccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccc
Confidence 2221100 000000000 001122679999999999998877 79999999999999997654211
Q ss_pred --cc------ccc--chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhccccccccccccccccc
Q psy13944 212 --WV------KGM--NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAK 281 (1217)
Q Consensus 212 --Wi------dn~--~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~h 281 (1217)
+. +.. .....++.....|....++|++.+.+||+||+|+|+|++.++.+... .
T Consensus 223 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~----~------------- 285 (393)
T d1i24a_ 223 HEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK----A------------- 285 (393)
T ss_dssp SGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC----T-------------
T ss_pred ccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcc----c-------------
Confidence 10 000 12345666777888888899999999999999999999998876444 1
Q ss_pred ccCCCCchhhhhhhhccce--eeccCCccCchHHHHHHHHhhch
Q psy13944 282 LIDPNNNVEEESIKKLDVN--YEINHGNYDTTNHVNYIKQNIKE 323 (1217)
Q Consensus 282 l~np~~~~~~~~~~~~g~~--YnI~sg~~s~~el~~~ia~~~g~ 323 (1217)
+.. ++.++..+++.++++.+++..+.
T Consensus 286 ----------------g~~~~~~~~~~~~si~el~~~i~~~~~~ 313 (393)
T d1i24a_ 286 ----------------GEFRVFNQFTEQFSVNELASLVTKAGSK 313 (393)
T ss_dssp ----------------TCEEEEEECSEEEEHHHHHHHHHHHHHT
T ss_pred ----------------ceeeeecCCCCeeEHHHHHHHHHHHHHh
Confidence 222 23333478889999999876543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=3.5e-19 Score=198.13 Aligned_cols=247 Identities=9% Similarity=0.005 Sum_probs=171.8
Q ss_pred CcccCCCCCCcccHHHHHHHHhcChh-HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEEEcCccC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFADDA-FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVFHVAATV 84 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~~v-fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiViH~AA~v 84 (1217)
.-+||+.+.-|..+.++|.+--...+ .+. .. ..|+.+. +.+..+++ .+|.|+|+|+.+
T Consensus 5 IlITG~tGfiG~~l~~~L~~~g~~vi~~~~--------~~-----~~~~~~~------~~~~~~~~~~~~d~v~~~a~~~ 65 (315)
T d1e6ua_ 5 VFIAGHRGMVGSAIRRQLEQRGDVELVLRT--------RD-----ELNLLDS------RAVHDFFASERIDQVYLAAAKV 65 (315)
T ss_dssp EEEETTTSHHHHHHHHHHTTCTTEEEECCC--------TT-----TCCTTCH------HHHHHHHHHHCCSEEEECCCCC
T ss_pred EEEEcCCcHHHHHHHHHHHHCcCEEEEecC--------ch-----hccccCH------HHHHHHHhhcCCCEEEEcchhc
Confidence 45799999999999998865211111 110 00 1355554 66666654 479999999886
Q ss_pred Cc----ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcccc
Q psy13944 85 KF----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTEL 158 (1217)
Q Consensus 85 ~f----~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~ 158 (1217)
.. ..+..+.+++|+.||.+||++|++. ++++|||+||..+||.... ++|......
T Consensus 66 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~------------------ 126 (315)
T d1e6ua_ 66 GGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESELLQG------------------ 126 (315)
T ss_dssp CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGGTTSS------------------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCCCCccCCccccC------------------
Confidence 53 2355678899999999999999984 8999999999999997542 344321100
Q ss_pred cccccccCCCCC-ChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccc--cccchhHHHHHHHhcCceeE
Q psy13944 159 TVLNDILIKPMP-NTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWV--KGMNGLTAMYVAVGLGIMRT 233 (1217)
Q Consensus 159 ~~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWi--dn~~g~~~li~~~~~G~l~~ 233 (1217)
...+| +.|+.||.+||++++.+. .+++++|+||++||||+..+..... .........+.....+....
T Consensus 127 -------~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (315)
T d1e6ua_ 127 -------TLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVV 199 (315)
T ss_dssp -------CCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred -------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceE
Confidence 00122 259999999999999887 6999999999999999764322111 11112223345555666777
Q ss_pred EeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchH
Q psy13944 234 VYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTN 312 (1217)
Q Consensus 234 i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~e 312 (1217)
+.+++...+++++|+|++.++..++..... .. ..........++++.+ +.+..+
T Consensus 200 ~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~----~~---------------------~~~~~~~~~~~~~~~~~~~~i~~ 254 (315)
T d1e6ua_ 200 VWGSGTPMREFLHVDDMAAASIHVMELAHE----VW---------------------LENTQPMLSHINVGTGVDCTIRE 254 (315)
T ss_dssp EESCSCCEECEEEHHHHHHHHHHHHHSCHH----HH---------------------HHTSBTTBCCEEESCSCCEEHHH
T ss_pred EcCCCceEEEEEEeehhHHHHHHhhhhccc----cc---------------------cccccccccccccCCCcchHHHH
Confidence 888999999999999999999888776444 10 0001113556888888 889999
Q ss_pred HHHHHHHhhchh
Q psy13944 313 HVNYIKQNIKEK 324 (1217)
Q Consensus 313 l~~~ia~~~g~~ 324 (1217)
+++.+++.+|.+
T Consensus 255 ~~~~i~~~~~~~ 266 (315)
T d1e6ua_ 255 LAQTIAKVVGYK 266 (315)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhCCC
Confidence 999999988876
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.78 E-value=1.3e-18 Score=199.46 Aligned_cols=264 Identities=13% Similarity=0.060 Sum_probs=176.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh--HH--------------------Hhhhc----CcccCCCeEEEEccCCCCCCCC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA--FD--------------------RLRKE----NANFTERIVVLTADLQSDGLGL 62 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v--fd--------------------~Lr~~----~p~~~~kI~~V~GDl~d~~LGL 62 (1217)
-+||+.+.-|..+.++|.+--...+ +| .+... ......++.++.||++++
T Consensus 6 LITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~---- 81 (383)
T d1gy8a_ 6 LVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE---- 81 (383)
T ss_dssp EEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH----
T ss_pred EEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH----
Confidence 4789999999999999975322111 11 11111 112345689999999998
Q ss_pred CHHHHHHhc---CCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccc
Q psy13944 63 DEKEKKVLR---EDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 63 s~edl~~L~---~~VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
+.++.++ .++|+|||+||..... .......++|+.||.++|++|++ .++++++++||..+++.........
T Consensus 82 --~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~ 158 (383)
T d1gy8a_ 82 --DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLL-HKCDKIIFSSSAAIFGNPTMGSVST 158 (383)
T ss_dssp --HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEEEGGGTBSCCC-----
T ss_pred --HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhc-cCCcccccccccccccccccccccc
Confidence 7777665 4689999999987543 34557889999999999999998 5889999999998887644210000
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCc-ccc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCP-MWV 213 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~p-GWi 213 (1217)
-..+ +.++. . ...-+.|+.||+.+|++++.+. .+++++++||++|||+...+.. .+.
T Consensus 159 ~~~~------------~~e~~--~------~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~ 218 (383)
T d1gy8a_ 159 NAEP------------IDINA--K------KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHY 218 (383)
T ss_dssp CCCC------------BCTTS--C------CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCS
T ss_pred cccc------------ccccc--C------CCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccc
Confidence 0000 00100 0 0112679999999999999987 7999999999999999875532 122
Q ss_pred cccchh-HHHHH----HH------------hcCceeEEee------CCCceeccccHHHHHHHHHHHHHhhhhhcccccc
Q psy13944 214 KGMNGL-TAMYV----AV------------GLGIMRTVYQ------NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDT 270 (1217)
Q Consensus 214 dn~~g~-~~li~----~~------------~~G~l~~i~g------~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~ 270 (1217)
...... ..++. .. ..+....+.| +|.+.+||+||+|+|++++.++..... .+.
T Consensus 219 ~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~----~~~ 294 (383)
T d1gy8a_ 219 QGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEK----LGP 294 (383)
T ss_dssp TTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHT----CCT
T ss_pred cccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhcc----ccc
Confidence 211111 11111 11 1122223333 578899999999999999998876544 110
Q ss_pred cccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHhhchh
Q psy13944 271 ITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 271 ~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~~g~~ 324 (1217)
......+++||++++ ++++.|+++.+.+..|.+
T Consensus 295 ---------------------~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~~ 328 (383)
T d1gy8a_ 295 ---------------------NDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHP 328 (383)
T ss_dssp ---------------------TTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCC
T ss_pred ---------------------cccccCccEEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 001124788999999 999999999999998865
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.4e-18 Score=195.60 Aligned_cols=243 Identities=12% Similarity=-0.046 Sum_probs=172.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhH--HH------------hhhc-CcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAF--DR------------LRKE-NANFTERIVVLTADLQSDGLGLDEKEKKVLRE- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vf--d~------------Lr~~-~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~- 72 (1217)
-+||+.|.-|..+.++|.+.. ..+. ++ +... ......+++++.||++++ +.+..++.
T Consensus 5 LVTG~tGfIG~~l~~~Ll~~g-~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~ 77 (347)
T d1t2aa_ 5 LITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDS------TCLVKIINE 77 (347)
T ss_dssp EEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCH------HHHHHHHHH
T ss_pred EEecCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCc------hhhHHHHhh
Confidence 478999999999999998742 1221 11 1111 122346789999999998 78887765
Q ss_pred -CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhcC--CCCeEEEEcCccccccccc--ccccccCCCCChH
Q psy13944 73 -DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMK--NLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHI 144 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~~--~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~ 144 (1217)
++++|+|+||..... .....++++|+.||.+++++|+++. +.++|||+||+.|||.... ++|+....|
T Consensus 78 ~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P---- 153 (347)
T d1t2aa_ 78 VKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYP---- 153 (347)
T ss_dssp HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCC----
T ss_pred cccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCC----
Confidence 457999999976543 3455778999999999999999853 3458999999999986432 344321111
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
-+.|+.||.+||++++.++ .+++++++||++||||...+..+ . ......+
T Consensus 154 -------------------------~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~--~-~~~~~~i 205 (347)
T d1t2aa_ 154 -------------------------RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFV--T-RKISRSV 205 (347)
T ss_dssp -------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSH--H-HHHHHHH
T ss_pred -------------------------CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCcc--c-cccceee
Confidence 1579999999999999876 79999999999999996543211 0 0112233
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceee
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYE 302 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Yn 302 (1217)
+.....+......+++++.+|++||+|+|++++.++.+... ..|+
T Consensus 206 ~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~-----------------------------------~~~~ 250 (347)
T d1t2aa_ 206 AKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP-----------------------------------EDFV 250 (347)
T ss_dssp HHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSSC-----------------------------------CCEE
T ss_pred ehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCCC-----------------------------------ccce
Confidence 33444445566788999999999999999999988875332 3567
Q ss_pred ccCC-ccCchHHHHHHHHhhchhh
Q psy13944 303 INHG-NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 303 I~sg-~~s~~el~~~ia~~~g~~~ 325 (1217)
++.+ ..+..+..+.+...++...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~ 274 (347)
T d1t2aa_ 251 IATGEVHSVREFVEKSFLHIGKTI 274 (347)
T ss_dssp ECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred eccccccccchhhhhhhhhhccee
Confidence 7777 7788888888888887653
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.74 E-value=1e-17 Score=189.42 Aligned_cols=259 Identities=13% Similarity=0.109 Sum_probs=178.0
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhc-------C-hhHHHhhhc--CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFA-------D-DAFDRLRKE--NANFTERIVVLTADLQSDGLGLDEKEKKVLRED 73 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~-------~-~vfd~Lr~~--~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~ 73 (1217)
+|| .-+||+.+.-|..+.+.|.+-.- + .-.+.+++. .+........+.||+.+. +.+..++.+
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~~ 83 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ------GAYDEVIKG 83 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST------TTTTTTTTT
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccch------hhhhhhccc
Confidence 355 44889999999999888876321 1 011222211 122233445688999998 778888899
Q ss_pred ccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc------ccccccCCCCChHHHH
Q psy13944 74 VNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK------IEEKFYEPLYTHIEME 147 (1217)
Q Consensus 74 VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~------I~E~~y~~p~dp~~~~ 147 (1217)
+|+|+|+|+...+..+....+..|+.||.++|++|.+.+++++|||+||+.+.+.... ++|..+ +...+.
T Consensus 84 ~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~----~~~~~~ 159 (342)
T d1y1pa1 84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW----NLESID 159 (342)
T ss_dssp CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCC----CHHHHH
T ss_pred chhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccc----cccccc
Confidence 9999999999998888888999999999999999999878999999999765443221 222221 112221
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
.. ....++.. ....+.|+.||.++|++++.+. .++.++++||+.|+||...|.. .......++
T Consensus 160 ~~-~~~~e~~~--------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~----~~~~~~~~~ 226 (342)
T d1y1pa1 160 KA-KTLPESDP--------QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----QSGSTSGWM 226 (342)
T ss_dssp HH-HHSCTTST--------THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT----CCCHHHHHH
T ss_pred cc-ccccccCC--------CCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccc----cccchHHHH
Confidence 11 11111111 0111469999999999887764 5688999999999998655432 222345666
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeec
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEI 303 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI 303 (1217)
..+..|..... ..+...++++||+|+|++++.++.+... +..|++
T Consensus 227 ~~l~~g~~~~~-~~~~~~~~~v~v~Dva~~~i~~l~~~~~----------------------------------~g~~~~ 271 (342)
T d1y1pa1 227 MSLFNGEVSPA-LALMPPQYYVSAVDIGLLHLGCLVLPQI----------------------------------ERRRVY 271 (342)
T ss_dssp HHHHTTCCCHH-HHTCCSEEEEEHHHHHHHHHHHHHCTTC----------------------------------CSCEEE
T ss_pred HHHHcCCcCcc-cCCccceeeeeHHHHHHHHHHhhcCccc----------------------------------cceEEE
Confidence 77777754332 2356678999999999999988876544 233556
Q ss_pred cCC-ccCchHHHHHHHHhh
Q psy13944 304 NHG-NYDTTNHVNYIKQNI 321 (1217)
Q Consensus 304 ~sg-~~s~~el~~~ia~~~ 321 (1217)
+++ ++++.|+++.+++..
T Consensus 272 ~~~~~~t~~eia~~i~k~~ 290 (342)
T d1y1pa1 272 GTAGTFDWNTVLATFRKLY 290 (342)
T ss_dssp ECCEEECHHHHHHHHHHHC
T ss_pred EcCCceEHHHHHHHHHHHc
Confidence 666 999999999998875
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.73 E-value=8e-18 Score=188.49 Aligned_cols=244 Identities=10% Similarity=-0.035 Sum_probs=170.3
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHH------------hhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDR------------LRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLRE- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~------------Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~~- 72 (1217)
+-+||+.|.-|..+.+.|.+-.-. ..+++ +..... .....+.++.+|+++. +.+...++
T Consensus 4 ~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~------~~~~~~~~~ 77 (339)
T d1n7ha_ 4 ALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDA------SSLRRWIDV 77 (339)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCH------HHHHHHHHH
T ss_pred EEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCH------HHHHHHHhh
Confidence 347999999999999999873211 11111 111111 1235678999999998 77776654
Q ss_pred -CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHhHhc----CCCCeEEEEcCccccccccc-ccccccCCCCCh
Q psy13944 73 -DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEM----KNLDSFIYVSTAYSNCNIKK-IEEKFYEPLYTH 143 (1217)
Q Consensus 73 -~VDiViH~AA~v~f~---e~l~~a~~vNV~GT~~LLelAk~~----~~lk~fV~vSTa~v~g~~~~-I~E~~y~~p~dp 143 (1217)
++|+|||+||..... +.+......|+.|+.+++++|+.+ ....++++.||+++++.... ++|..+..|
T Consensus 78 ~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p--- 154 (339)
T d1n7ha_ 78 IKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHP--- 154 (339)
T ss_dssp HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCC---
T ss_pred hccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCC---
Confidence 569999999987643 455678899999999999998753 24457889999988876543 444332211
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
-+.|+.||+.+|+++..++ .+++++++||++||||+..+ ++.. .....
T Consensus 155 --------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~--~~~~--~~i~~ 204 (339)
T d1n7ha_ 155 --------------------------RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITR 204 (339)
T ss_dssp --------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHH
T ss_pred --------------------------cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCC--CCCc--chhhH
Confidence 1579999999999998887 68999999999999996532 1111 11122
Q ss_pred HHHHHhcC-ceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccce
Q psy13944 222 MYVAVGLG-IMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVN 300 (1217)
Q Consensus 222 li~~~~~G-~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~ 300 (1217)
.+.....| ....+.|++.+.+|++||+|+|+++..++..... ..
T Consensus 205 ~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~-----------------------------------~~ 249 (339)
T d1n7ha_ 205 ALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP-----------------------------------DD 249 (339)
T ss_dssp HHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSC-----------------------------------CE
T ss_pred HHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcCCC-----------------------------------Cc
Confidence 22222333 3445678899999999999999999988765333 34
Q ss_pred eeccCC-ccCchHHHHHHHHhhchhh
Q psy13944 301 YEINHG-NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 301 YnI~sg-~~s~~el~~~ia~~~g~~~ 325 (1217)
++++.+ +.+..++++.+.+.+|...
T Consensus 250 ~~~~~~~~~s~~~~~~~~~~~~~~~~ 275 (339)
T d1n7ha_ 250 YVVATEEGHTVEEFLDVSFGYLGLNW 275 (339)
T ss_dssp EEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred cccccccccccchhhhhhhhhhhccc
Confidence 555556 8899999999999988764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.72 E-value=2.1e-17 Score=184.04 Aligned_cols=260 Identities=16% Similarity=0.148 Sum_probs=172.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcC-------cccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc--cEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKEN-------ANFTERIVVLTADLQSDGLGLDEKEKKVLREDV--NIV 77 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~-------p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V--DiV 77 (1217)
.-+||+.|.-|..+.+.|.+--.. .++|++.... .....+++++.||+++. +++..+++++ |+|
T Consensus 3 ILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~------~~l~~~~~~~~~d~V 76 (338)
T d1orra_ 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK------NDVTRLITKYMPDSC 76 (338)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH------HHHHHHHHHHCCSEE
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH------HHHHHHHHhcCCceE
Confidence 457999999999999999874211 1122111110 11346899999999998 8888887654 999
Q ss_pred EEcCccCCccc---CHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccc--cc--cccCCCCChHHHHHHh
Q psy13944 78 FHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKI--EE--KFYEPLYTHIEMEQII 150 (1217)
Q Consensus 78 iH~AA~v~f~e---~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I--~E--~~y~~p~dp~~~~~~~ 150 (1217)
||+||.+.... ......++|+.||.+||++|.+.+..+.+++.||+.+++..... .+ ...+....+
T Consensus 77 ih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~------- 149 (338)
T d1orra_ 77 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP------- 149 (338)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT-------
T ss_pred EeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccc-------
Confidence 99999986543 45678999999999999999997444455555555554443221 11 000000000
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHH--
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV-- 226 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~-- 226 (1217)
......+ ....-+.|+.+|..+|.++..+. .+....++|++.+||+...+...+ .....++..+
T Consensus 150 -----~~~~~~~---~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 217 (338)
T d1orra_ 150 -----NGYDEST---QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQ----GWVGWFCQKAVE 217 (338)
T ss_dssp -----TCBCTTS---CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTB----CHHHHHHHHHHH
T ss_pred -----cCcccCC---ccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccc----cccchhhHHHHH
Confidence 0000000 01112569999999999998776 789999999999998765332111 1112222222
Q ss_pred ---hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeec
Q psy13944 227 ---GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEI 303 (1217)
Q Consensus 227 ---~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI 303 (1217)
+.+....++|++++.+|++||+|+|++++.++..... . .++.|++
T Consensus 218 ~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~----~----------------------------~~~~~~i 265 (338)
T d1orra_ 218 IKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSK----I----------------------------RGNAFNI 265 (338)
T ss_dssp HHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHH----H----------------------------TTCEEEE
T ss_pred HHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcccc----c----------------------------cCccccc
Confidence 2355567889999999999999999999988876443 1 2677888
Q ss_pred cCC---ccCchHHHHHHHHhhchh
Q psy13944 304 NHG---NYDTTNHVNYIKQNIKEK 324 (1217)
Q Consensus 304 ~sg---~~s~~el~~~ia~~~g~~ 324 (1217)
..+ +++..|+++.+.+.+|.+
T Consensus 266 ~~~~~~~~s~~e~~~~i~~~~~~~ 289 (338)
T d1orra_ 266 GGTIVNSLSLLELFKLLEDYCNID 289 (338)
T ss_dssp SSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred cccccccccHHHHHHHHHHHHCCC
Confidence 554 678889999999988765
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=5.3e-16 Score=176.35 Aligned_cols=109 Identities=16% Similarity=0.159 Sum_probs=83.5
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcC--CCcEE
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMK--NLDSF 620 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~--~lk~f 620 (1217)
..++++++|||+|. +++++++.+ +|+|||+||..... +.....+++|+.||.|||++|++.. +.++|
T Consensus 54 ~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~ 127 (357)
T d1db3a_ 54 NPKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127 (357)
T ss_dssp -CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEE
T ss_pred CCCeEEEEeecCCH------HHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEE
Confidence 46799999999984 467777765 49999999976543 4455788999999999999999862 34579
Q ss_pred EEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 621 IYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 621 V~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
||+||+.|||... +++|+....| -|.|+.||++||.+|+.|.
T Consensus 128 i~~SS~~vYG~~~~~~~~E~~~~~P-----------------------------~~~Y~~sK~~~E~~~~~~~ 171 (357)
T d1db3a_ 128 YQASTSELYGLVQEIPQKETTPFYP-----------------------------RSPYAVAKLYAYWITVNYR 171 (357)
T ss_dssp EEEEEGGGGTTCCSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHH
T ss_pred EEEEchhhhCCCCCCCcCCCCCCCC-----------------------------CChHHHHHHHHHHHHHHHH
Confidence 9999999998643 5667643222 1469999999888886653
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.59 E-value=4.5e-15 Score=166.94 Aligned_cols=249 Identities=14% Similarity=0.045 Sum_probs=173.2
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcC------cccCCCeEEEEccCCCCCCCCCHHHHHHhcC--CccEEE
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKEN------ANFTERIVVLTADLQSDGLGLDEKEKKVLRE--DVNIVF 78 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~------p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--~VDiVi 78 (1217)
.-+||+.|.-|..+.+.|.+.... ..+++..... ....++++++.||++++ +.+..+++ .+++|+
T Consensus 11 ILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~------~~l~~~~~~~~~~~v~ 84 (356)
T d1rkxa_ 11 VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ------NKLLESIREFQPEIVF 84 (356)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH------HHHHHHHHHHCCSEEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccCh------Hhhhhhhhhchhhhhh
Confidence 558999999999999999885322 1122211111 12346799999999998 77777765 459999
Q ss_pred EcCccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc---ccccccCCCCChHHHHHHhhc
Q psy13944 79 HVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK---IEEKFYEPLYTHIEMEQIINS 152 (1217)
Q Consensus 79 H~AA~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~---I~E~~y~~p~dp~~~~~~~~~ 152 (1217)
|+||...- ...+..+..+|+.||.++|++|++.+..+.+++.||+.+++.... .+|....
T Consensus 85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~-------------- 150 (356)
T d1rkxa_ 85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM-------------- 150 (356)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB--------------
T ss_pred hhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccccccccccccc--------------
Confidence 99998643 245667899999999999999999877778888888776655432 1111100
Q ss_pred CCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----------CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 153 CSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 153 l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
.| -+.|+.+|..+|..+..+. .+++++++||+.|||+.+.+.. ..+..
T Consensus 151 ---------~p------~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~------~~i~~ 209 (356)
T d1rkxa_ 151 ---------GG------YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD------RIVPD 209 (356)
T ss_dssp ---------CC------SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS------CHHHH
T ss_pred ---------CC------CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhh------HHHHH
Confidence 01 1579999999998887643 3688999999999999753321 12334
Q ss_pred HHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhcccee
Q psy13944 222 MYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNY 301 (1217)
Q Consensus 222 li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~Y 301 (1217)
++.++. +....+.+.+++.+++++|+|+|.|++.++..... .+.. -..+..+
T Consensus 210 ~~~~~~-~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~----~~~~-----------------------~~~~~~~ 261 (356)
T d1rkxa_ 210 ILRAFE-QSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYT----DGAE-----------------------YAEGWNF 261 (356)
T ss_dssp HHHHHH-TTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHH----TCGG-----------------------GCSEEEC
T ss_pred HHHHHh-CCCceEEeeccccccccccccccchhhhhhhhhcc----cccc-----------------------ccccccc
Confidence 454544 44455678899999999999999999988887655 1100 0012334
Q ss_pred eccCC-ccCchHHHHHHHHhhchhh
Q psy13944 302 EINHG-NYDTTNHVNYIKQNIKEKF 325 (1217)
Q Consensus 302 nI~sg-~~s~~el~~~ia~~~g~~~ 325 (1217)
..+.+ ..+..++++.+.+..|.+.
T Consensus 262 ~~~~~~~~~~~~~~~~i~~~~~~~~ 286 (356)
T d1rkxa_ 262 GPNDADATPVKNIVEQMVKYWGEGA 286 (356)
T ss_dssp CCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred ccccccccccchhhhhhHHHhCCCc
Confidence 44445 6788899999999888663
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.57 E-value=1.9e-14 Score=160.61 Aligned_cols=107 Identities=21% Similarity=0.245 Sum_probs=84.1
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
..+++++.+|+++.. ........+|+|+|+|+....... ....+++|+.||.+|+++|++. ++++|||+|
T Consensus 54 ~~~~~~~~~d~~~~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~S 126 (322)
T d1r6da_ 54 DPRLRFVHGDIRDAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVS 126 (322)
T ss_dssp CTTEEEEECCTTCHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred CCCeEEEEeccccch------hhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEee
Confidence 457999999998853 566677889999999987654433 3467889999999999999997 789999999
Q ss_pred cceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+.+||... +++|.....| .+.|+.||.++|.+++.|
T Consensus 127 s~~~yg~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~ 165 (322)
T d1r6da_ 127 TNQVYGSIDSGSWTESSPLEP-----------------------------NSPYAASKAGSDLVARAY 165 (322)
T ss_dssp EGGGGCCCSSSCBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred cceeecCCCCCCCCCCCCCCC-----------------------------CCHHHHHHHHHHHHHHHH
Confidence 999998754 4666643222 136999999988888654
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.56 E-value=1.2e-14 Score=165.59 Aligned_cols=118 Identities=20% Similarity=0.123 Sum_probs=82.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcC--------
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMK-------- 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~-------- 615 (1217)
.+++++++||+++. .++.+++ ++|+||||||..+...+ ...++++|+.||.+++++|++..
T Consensus 50 ~~~~~~~~Dl~d~~------~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~ 123 (361)
T d1kewa_ 50 NRYNFEHADICDSA------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKK 123 (361)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHH
T ss_pred CCcEEEEccCCCHH------HHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc
Confidence 57999999999854 5666654 58999999998664433 34688999999999999998752
Q ss_pred CCcEEEEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 616 NLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+.++|||+||+.+||... +..|.....|... +.+ ...--+.|+.||.++|.+++.|.
T Consensus 124 ~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~----------------e~~---~~~p~s~Yg~sK~~~E~~~~~~~ 182 (361)
T d1kewa_ 124 NNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT----------------ETT---AYAPSSPYSASKASSDHLVRAWR 182 (361)
T ss_dssp HHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC----------------TTS---CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeccceeeCCCccCCccccccCCCCcc----------------cCC---CCCCCCHHHHHHHHHHHHHHHHH
Confidence 245899999999999765 2233322221100 000 11112569999999888887653
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1.2e-13 Score=154.68 Aligned_cols=108 Identities=16% Similarity=0.131 Sum_probs=80.9
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcC--CCcEE
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMK--NLDSF 620 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~--~lk~f 620 (1217)
..+++++.|||+|++ .+..+.. ++++|+|+||...+..+ ...+.++|+.||.+|+++|+++. +.++|
T Consensus 55 ~~~~~~~~~Dl~d~~------~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~ 128 (347)
T d1t2aa_ 55 EGNMKLHYGDLTDST------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKF 128 (347)
T ss_dssp --CEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEE
T ss_pred cCCcEEEEeecCCch------hhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEE
Confidence 467999999999854 4666654 56899999997765443 34678999999999999999873 33589
Q ss_pred EEEccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 621 IYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 621 V~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+||+.|||+.. +++|+....|. +.|+.||.+||.+++.|
T Consensus 129 i~~SS~~vyg~~~~~~~~E~~~~~P~-----------------------------~~Yg~sK~~aE~~~~~~ 171 (347)
T d1t2aa_ 129 YQASTSELYGKVQEIPQKETTPFYPR-----------------------------SPYGAAKLYAYWIVVNF 171 (347)
T ss_dssp EEEEEGGGTCSCSSSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHH
T ss_pred EEecchheecCCCCCCCCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHH
Confidence 9999999998643 56666432221 35999999988888665
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=5e-14 Score=153.67 Aligned_cols=239 Identities=17% Similarity=0.074 Sum_probs=143.8
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh--hHHHhhhcC--cc--cCCCeEEE-EccCCCCCCCCCHHHHHHhcCCccEEEEcCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD--AFDRLRKEN--AN--FTERIVVL-TADLQSDGLGLDEKEKKVLREDVNIVFHVAA 82 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~--vfd~Lr~~~--p~--~~~kI~~V-~GDl~d~~LGLs~edl~~L~~~VDiViH~AA 82 (1217)
+||+.|.-|..+.++|.+-.... ++|++.... +. ........ ..|+.+. .........+++|+|+||
T Consensus 4 ITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 4 VTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQ------IMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHH------HHTTCCCSSCCEEEECCS
T ss_pred EecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHH------Hhhhhcccchhhhhhhcc
Confidence 68899999999998888753222 222222111 00 01111111 1111111 111122356799999999
Q ss_pred cCCc-ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccc
Q psy13944 83 TVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELT 159 (1217)
Q Consensus 83 ~v~f-~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~ 159 (1217)
.... ..+.......|+.++.+++++|+.. ++ ++++.||..+++.... .+|...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i-~~v~~ss~~~~~~~~~~~~~~~~~---------------------- 133 (307)
T d1eq2a_ 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDFIESREY---------------------- 133 (307)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCSCBCSSGGG----------------------
T ss_pred cccccccccccccccccccccccccccccc-cc-cccccccccccccccccccccccc----------------------
Confidence 7654 3456677888999999999999884 55 4677777666654321 111111
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeE-Eee
Q psy13944 160 VLNDILIKPMPNTYTLSKNACEQMVREKM--DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRT-VYQ 236 (1217)
Q Consensus 160 ~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~-i~g 236 (1217)
....+.|+.+|.++|.++..+. .+++++++||++||||...+. ++.. .....++..+..|.... ..|
T Consensus 134 -------~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g 203 (307)
T d1eq2a_ 134 -------EKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHK-GSMA--SVAFHLNTQLNNGESPKLFEG 203 (307)
T ss_dssp -------CCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGG-GGGS--CHHHHHHHHHHC---------
T ss_pred -------cccccccccccchhhhhccccccccccccccccceeEeecccccc-cccc--ccccccccccccccceeeecC
Confidence 1223679999999999999987 789999999999999976432 1111 12234555566664433 457
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVN 315 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~ 315 (1217)
++...++++||+|++.++..+..... ...|+++++ ++++.|+++
T Consensus 204 ~~~~~r~~~~v~d~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~si~~i~~ 248 (307)
T d1eq2a_ 204 SENFKRDFVYVGDVADVNLWFLENGV-----------------------------------SGIFNLGTGRAESFQAVAD 248 (307)
T ss_dssp ----CBCEEEHHHHHHHHHHHHHHCC-----------------------------------CEEEEESCSCCBCHHHHHH
T ss_pred ccceeeeeeecccHHHHHHHHhhhcc-----------------------------------ccccccccccchhHHHHHH
Confidence 88899999999999999987765422 357999998 999999999
Q ss_pred HHHHhhch
Q psy13944 316 YIKQNIKE 323 (1217)
Q Consensus 316 ~ia~~~g~ 323 (1217)
.+++..+.
T Consensus 249 ~i~~~~~~ 256 (307)
T d1eq2a_ 249 ATLAYHKK 256 (307)
T ss_dssp HC------
T ss_pred HHHHhcCC
Confidence 98876543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.9e-13 Score=152.03 Aligned_cols=104 Identities=15% Similarity=0.222 Sum_probs=77.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.++.+..+|+.+.. ..++|+||||||.++.. ......+++||.||.+||++|++. ++ +|||+||
T Consensus 49 ~~~d~~~~~~~~~~-----------~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS 115 (312)
T d2b69a1 49 ENFELINHDVVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLAST 115 (312)
T ss_dssp TTEEEEECCTTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred CceEEEehHHHHHH-----------HcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEC
Confidence 45778888876643 35799999999977643 345578899999999999999987 44 7999999
Q ss_pred ceeecCcc--cccccccC--CCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 626 AYSNCNIK--KIEEKFYE--PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~--~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+.|||... ++.|.... .|..|. +.|+.||.++|.++..|.
T Consensus 116 ~~vy~~~~~~~~~e~~~~~~~~~~p~--------------------------~~Y~~sK~~~E~~~~~~~ 159 (312)
T d2b69a1 116 SEVYGDPEVHPQSEDYWGHVNPIGPR--------------------------ACYDEGKRVAETMCYAYM 159 (312)
T ss_dssp GGGGBSCSSSSBCTTCCCBCCSSSTT--------------------------HHHHHHHHHHHHHHHHHH
T ss_pred hheecCCCCCCCCccccCCCCCCCCc--------------------------cHHHHHHHHHHHHHHHHH
Confidence 99998654 56665431 121111 359999999888886653
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=6.5e-14 Score=149.57 Aligned_cols=194 Identities=13% Similarity=0.027 Sum_probs=141.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhc-ChhHHHhhhcC---cccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCcc
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFA-DDAFDRLRKEN---ANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAAT 83 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~-~~vfd~Lr~~~---p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~ 83 (1217)
.-.||+.|.-|..+.++|.+-.. ..+...-|+.. .....++..+.+|+.+. +++...++++|+|||+|+.
T Consensus 17 IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~------~~~~~~~~~~d~vi~~~~~ 90 (232)
T d2bkaa1 17 VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL------DDYASAFQGHDVGFCCLGT 90 (232)
T ss_dssp EEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGG------GGGGGGGSSCSEEEECCCC
T ss_pred EEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccc------ccccccccccccccccccc
Confidence 45789999999999999977433 13332223221 23456788888999887 7888888999999999998
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccccc
Q psy13944 84 VKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLND 163 (1217)
Q Consensus 84 v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp 163 (1217)
.....+...+.++|+.++.+++++|++ .++++|||+||..++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~v~~fi~~Ss~~~~~~----------------------------------- 134 (232)
T d2bkaa1 91 TRGKAGAEGFVRVDRDYVLKSAELAKA-GGCKHFNLLSSKGADKS----------------------------------- 134 (232)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTCCTT-----------------------------------
T ss_pred cccccchhhhhhhcccccceeeecccc-cCccccccCCccccccC-----------------------------------
Confidence 766666778899999999999999999 47999999999876432
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHhcCCCC-EEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCcee
Q psy13944 164 ILIKPMPNTYTLSKNACEQMVREKMDKLP-LGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIV 242 (1217)
Q Consensus 164 ~~~~~~PNtYa~SK~~AE~lv~~~~~gLP-vvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~ 242 (1217)
.++.|+.+|..+|+.+.+. +++ ++|+||+.+||+..+..+ ...++.....+ + ..+....
T Consensus 135 -----~~~~Y~~~K~~~E~~l~~~--~~~~~~IlRP~~i~G~~~~~~~--------~~~~~~~~~~~----~-~~~~~~~ 194 (232)
T d2bkaa1 135 -----SNFLYLQVKGEVEAKVEEL--KFDRYSVFRPGVLLCDRQESRP--------GEWLVRKFFGS----L-PDSWASG 194 (232)
T ss_dssp -----CSSHHHHHHHHHHHHHHTT--CCSEEEEEECCEEECTTGGGSH--------HHHHHHHHHCS----C-CTTGGGG
T ss_pred -----ccchhHHHHHHhhhccccc--cccceEEecCceeecCCCcCcH--------HHHHHHHHhhc----c-CCcccCC
Confidence 1257999999999999875 444 899999999998653211 11222222222 1 1223334
Q ss_pred ccccHHHHHHHHHHHHHhhhh
Q psy13944 243 DMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 243 D~VpVDdVvnAii~aa~~~~~ 263 (1217)
..||++|+|++++.++..+..
T Consensus 195 ~~I~~~dvA~a~i~~~~~~~~ 215 (232)
T d2bkaa1 195 HSVPVVTVVRAMLNNVVRPRD 215 (232)
T ss_dssp TEEEHHHHHHHHHHHHTSCCC
T ss_pred CeEEHHHHHHHHHHHHhcCcc
Confidence 569999999999988765544
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=7.8e-13 Score=148.37 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=81.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.++++++|||++.+ .+.++++ ++|+|||+||...... .....+++|+.||.+||++|++. ++++|||+
T Consensus 50 ~~~~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~ 122 (338)
T d1udca_ 50 KHPTFVEGDIRNEA------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFS 122 (338)
T ss_dssp SCCEEEECCTTCHH------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred CCCEEEEeecCCHH------HHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEec
Confidence 46899999999853 5666665 7899999999876544 34478999999999999999998 79999999
Q ss_pred ccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||..+|+... +..|... .....+.|+.||..+|.++.+|
T Consensus 123 Ss~~vy~~~~~~~~~e~~~----------------------------~~~p~~~Y~~sK~~~e~~~~~~ 163 (338)
T d1udca_ 123 SSATVYGDQPKIPYVESFP----------------------------TGTPQSPYGKSKLMVEQILTDL 163 (338)
T ss_dssp EEGGGGCSCCSSSBCTTSC----------------------------CCCCSSHHHHHHHHHHHHHHHH
T ss_pred CcceEEccccccccccccc----------------------------cCCCcchHHHHHhhhhHHHHHH
Confidence 9999987644 2222211 0112246999999988888654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=1.1e-12 Score=146.89 Aligned_cols=112 Identities=13% Similarity=0.150 Sum_probs=78.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcH---HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHF---QTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~---~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++++.|||++.. +..+.+..++|+|||+||.+...... ..++.+|+.||.+++++|++. +. +++|+||
T Consensus 45 ~~~~~i~~Di~~~~-----~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss 117 (342)
T d2blla1 45 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPST 117 (342)
T ss_dssp TTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECC
T ss_pred CCeEEEECccCChH-----HHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-cc-ccccccc
Confidence 57999999999864 23444567899999999987654443 367899999999999999987 44 6688999
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCC-ChhHHHHHHHHHHhhhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMP-NTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~p-NtYt~SK~lAE~lv~~y 690 (1217)
+.+|+... ...|.....+.+ ....| +.|+.||.++|.++..|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~p~~~Y~~sK~~~E~~~~~~ 162 (342)
T d2blla1 118 SEVYGMCSDKYFDEDHSNLIVG-----------------------PVNKPRWIYSVSKQLLDRVIWAY 162 (342)
T ss_dssp GGGGBTCCCSSBCTTTCCCBCC-----------------------CTTCGGGHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccc-----------------------ccCCCcchhhhcccchhhhhhhh
Confidence 98888654 233321111100 00112 46999999988888654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.40 E-value=3e-13 Score=154.73 Aligned_cols=121 Identities=15% Similarity=-0.016 Sum_probs=81.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchhc------HHHHHHHHHHHHHHHHHHHHhcCCCcEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDEH------FQTAFEINCKGTEKLLKMAEEMKNLDSF 620 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~~------~~~~~~~NV~GT~nLLelA~~~~~lk~f 620 (1217)
.+++++.|||+|.+ .++.+++ ++|+|||+||...+..+ ....+.+||.||.++|++|++....+.|
T Consensus 67 ~~i~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~ 140 (393)
T d1i24a_ 67 KSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHL 140 (393)
T ss_dssp CCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCcEEEEccCCCHH------HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccce
Confidence 56999999999853 5777765 46999999997654432 2357789999999999999998555678
Q ss_pred EEEccceeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCC-CChhHHHHHHHHHHhhhhc
Q psy13944 621 IYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPM-PNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 621 V~vSTa~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~-pNtYt~SK~lAE~lv~~y~ 691 (1217)
+++||+.+++... +..|.......+ ..+. ....... .+.|+.||.+||.++..|.
T Consensus 141 i~~ss~~~~~~~~~~~~~~~~~~~~~--------------~~~~--~~~~~~~p~~~Y~~sK~~aE~~~~~~~ 197 (393)
T d1i24a_ 141 VKLGTMGEYGTPNIDIEEGYITITHN--------------GRTD--TLPYPKQASSFYHLSKVHDSHNIAFTC 197 (393)
T ss_dssp EEECCGGGGCCCSSCBCSSEEEEEET--------------TEEE--EEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred eecccccccccccccccccccccccc--------------cccc--ccccccccccHHHHHhhhhcccccccc
Confidence 8888888877644 333432211000 0000 0001112 2579999999998886653
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.39 E-value=5.1e-12 Score=136.49 Aligned_cols=213 Identities=16% Similarity=0.056 Sum_probs=155.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEE-----ccCCCCCCCCCHHHHHHhcC--CccEEEEcC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLT-----ADLQSDGLGLDEKEKKVLRE--DVNIVFHVA 81 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~-----GDl~d~~LGLs~edl~~L~~--~VDiViH~A 81 (1217)
-+||+.|.-|..+.++|.+. ..+++. +|+.+. ++++.+++ +.|+|||+|
T Consensus 5 lItGasGfiG~~l~~~L~~~------------------g~~Vi~~~r~~~D~~d~------~~~~~~l~~~~~d~vih~a 60 (281)
T d1vl0a_ 5 LITGANGQLGREIQKQLKGK------------------NVEVIPTDVQDLDITNV------LAVNKFFNEKKPNVVINCA 60 (281)
T ss_dssp EEESTTSHHHHHHHHHHTTS------------------SEEEEEECTTTCCTTCH------HHHHHHHHHHCCSEEEECC
T ss_pred EEECCCCHHHHHHHHHHHhC------------------CCEEEEeechhccCCCH------HHHHHHHHHcCCCEEEeec
Confidence 46888888888888777431 112222 356655 67777765 569999999
Q ss_pred ccCCc---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCcc
Q psy13944 82 ATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHT 156 (1217)
Q Consensus 82 A~v~f---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~ 156 (1217)
|.... ..........|+.++..+++.++.. ...++++||..+++.... ..|...+
T Consensus 61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss~~v~~~~~~~~~~e~~~~------------------ 120 (281)
T d1vl0a_ 61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQISTDYVFDGEAKEPITEFDEV------------------ 120 (281)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEEGGGSCSCCSSCBCTTSCC------------------
T ss_pred cccccccccccchhhcccccccccccccccccc--cccccccccceeeeccccccccccccc------------------
Confidence 98753 3455678899999999999999873 458888998888776432 2222111
Q ss_pred cccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEee
Q psy13944 157 ELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQ 236 (1217)
Q Consensus 157 ~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g 236 (1217)
...+.|+.+|..+|+++.++ +.+.+|+||++|||+... ....++..+..+....+.+
T Consensus 121 -----------~~~~~~~~~k~~~e~~~~~~--~~~~~i~R~~~vyG~~~~----------~~~~~~~~~~~~~~~~~~~ 177 (281)
T d1vl0a_ 121 -----------NPQSAYGKTKLEGENFVKAL--NPKYYIVRTAWLYGDGNN----------FVKTMINLGKTHDELKVVH 177 (281)
T ss_dssp -----------CCCSHHHHHHHHHHHHHHHH--CSSEEEEEECSEESSSSC----------HHHHHHHHHHHCSEEEEES
T ss_pred -----------cchhhhhhhhhHHHHHHHHh--CCCccccceeEEeCCCcc----------cccchhhhhccCCceeecC
Confidence 11256999999999999886 578999999999998532 2234555555665554544
Q ss_pred CCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHH
Q psy13944 237 NTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVN 315 (1217)
Q Consensus 237 ~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~ 315 (1217)
+..+++++++|+|+++..++..... ..||++++ .++..|+++
T Consensus 178 --~~~~~~i~v~D~~~~~~~~~~~~~~-----------------------------------g~~~~~~~~~~s~~e~~~ 220 (281)
T d1vl0a_ 178 --DQVGTPTSTVDLARVVLKVIDEKNY-----------------------------------GTFHCTCKGICSWYDFAV 220 (281)
T ss_dssp --SCEECCEEHHHHHHHHHHHHHHTCC-----------------------------------EEEECCCBSCEEHHHHHH
T ss_pred --Cceeccchhhhhhhhhhhhhhhccc-----------------------------------CceeEeCCCccchHHHHH
Confidence 6899999999999999988765332 36888888 899999999
Q ss_pred HHHHhhchhh
Q psy13944 316 YIKQNIKEKF 325 (1217)
Q Consensus 316 ~ia~~~g~~~ 325 (1217)
.+++.+|.+.
T Consensus 221 ~i~~~~g~~~ 230 (281)
T d1vl0a_ 221 EIFRLTGIDV 230 (281)
T ss_dssp HHHHHHCCCC
T ss_pred HHHHHhCCCc
Confidence 9999999763
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.38 E-value=6.9e-12 Score=140.90 Aligned_cols=107 Identities=22% Similarity=0.246 Sum_probs=81.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.+||++. ++++.+.. ++|+|||+||..... +....+..+|+.||.+|+++|++. ++++|||+
T Consensus 51 ~~v~~~~~Dl~d~------~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~ 123 (347)
T d1z45a2 51 HHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFS 123 (347)
T ss_dssp SCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred cCCeEEEeecCCH------HHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEee
Confidence 4688999999984 35666654 789999999986533 333477889999999999999997 89999999
Q ss_pred ccceeecCccc------ccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 624 STAYSNCNIKK------IEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 624 STa~v~g~~~~------I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
||..+||.... ++|... ....+.|+.||.++|.+++.|.
T Consensus 124 SS~~vyg~~~~~~~~~~~~e~~~-----------------------------~~p~~~Y~~sK~~~E~~~~~~~ 168 (347)
T d1z45a2 124 SSATVYGDATRFPNMIPIPEECP-----------------------------LGPTNPYGHTKYAIENILNDLY 168 (347)
T ss_dssp EEGGGGCCGGGSTTCCSBCTTSC-----------------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred cceeeecCcccCCCCCccccccC-----------------------------CCCCChhHhHHHHHHHHHHHHH
Confidence 99999986542 222211 1112569999999999987764
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.37 E-value=1.7e-12 Score=145.55 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=84.7
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
..+++++.+|+.|.. .........++|+|+||..... +.....+++|+.||.+|+++|+++ ++++|||+|
T Consensus 69 ~~~~~~~~~d~~d~~------~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~S 141 (341)
T d1sb8a_ 69 WSNFKFIQGDIRNLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAA 141 (341)
T ss_dssp HTTEEEEECCTTSHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred cCCeeEEeecccccc------ccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcc
Confidence 357999999998753 4666677899999999976644 344468899999999999999998 789999999
Q ss_pred cceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+.+||... +++|+....| .+.|+.||.++|.+++.|
T Consensus 142 S~~vyg~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~ 180 (341)
T d1sb8a_ 142 SSSTYGDHPGLPKVEDTIGKP-----------------------------LSPYAVTKYVNELYADVF 180 (341)
T ss_dssp EGGGGTTCCCSSBCTTCCCCC-----------------------------CSHHHHHHHHHHHHHHHH
T ss_pred cceeeCCCCCCCccCCCCCCC-----------------------------CCcchHHHHHHHHHHHHH
Confidence 999998654 5666643332 246999999988888655
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.31 E-value=1.4e-11 Score=138.33 Aligned_cols=120 Identities=19% Similarity=0.187 Sum_probs=82.0
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
..+++++.|||+|. +.+..+...++.|+|+|+....... ....+++|+.||.+||+.|+.. + .++|++|
T Consensus 51 ~~~i~~~~~Di~d~------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~s 122 (346)
T d1oc2a_ 51 GDRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVS 122 (346)
T ss_dssp SSSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEE
T ss_pred cCCeEEEEccCCCH------HHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccc
Confidence 35799999999885 4688888999999999998765433 3467899999999999999987 3 4799999
Q ss_pred cceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 625 TAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 625 Ta~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
|+.+||... ..|.....+..+ .....+.+ ...-.+.|+.||.++|.+++.|
T Consensus 123 s~~vyg~~~-~~~~~~~~~~~~-----------~~~~~e~~---~~~p~s~Y~~sK~~~E~~~~~~ 173 (346)
T d1oc2a_ 123 TDEVYGDLP-LREDLPGHGEGP-----------GEKFTAET---NYNPSSPYSSTKAASDLIVKAW 173 (346)
T ss_dssp EGGGGCCBC-CGGGSTTTTCST-----------TSSBCTTS---CCCCCSHHHHHHHHHHHHHHHH
T ss_pred cceEecccC-ccccccccccCc-----------ccccccCC---CCCCCCHHHHHHHHHHHHHHHH
Confidence 999998632 223221110000 00000000 0111257999999988888655
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.30 E-value=2.7e-11 Score=137.78 Aligned_cols=117 Identities=15% Similarity=0.031 Sum_probs=79.6
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHh---cCccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLR---EDVNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFI 621 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~---~~vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~~lk~fV 621 (1217)
..++.++.||++|++ .++.++ ..+|+|||+||....... .....++|+.||.++|++|++. ++++++
T Consensus 68 ~~~~~~~~~Di~d~~------~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~ 140 (383)
T d1gy8a_ 68 DRYAALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKII 140 (383)
T ss_dssp TCCCEEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred ccceEEEECcccCHH------Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCcccc
Confidence 356899999999854 456554 367999999998765433 3367889999999999999997 789999
Q ss_pred EEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 622 YVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 622 ~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
++||..+++............|.. +. . ....-+.|+.||..+|.+|+.|.
T Consensus 141 ~~~s~~~~~~~~~~~~~~~~~~~~--------------e~---~---~~~p~~~Y~~sK~~~e~~~~~~~ 190 (383)
T d1gy8a_ 141 FSSSAAIFGNPTMGSVSTNAEPID--------------IN---A---KKSPESPYGESKLIAERMIRDCA 190 (383)
T ss_dssp EEEEGGGTBSCCC-----CCCCBC--------------TT---S---CCBCSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccc--------------cc---c---CCCCCCHHHhhHhHHHHHHHHHH
Confidence 999988887543211100000100 00 0 00112469999999999987653
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.28 E-value=8.5e-12 Score=135.28 Aligned_cols=226 Identities=15% Similarity=0.034 Sum_probs=149.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC--ccEEEEcCccCCc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRED--VNIVFHVAATVKF 86 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~--VDiViH~AA~v~f 86 (1217)
-+||+.|.-|..+.+.|.+.......+ ++. + .+.+|++++ +.++.++++ +|+|||+||....
T Consensus 4 LItG~tGfiG~~l~~~L~~~g~~v~~~--~~~-~-------~~~~Dl~~~------~~~~~~i~~~~~D~Vih~Aa~~~~ 67 (298)
T d1n2sa_ 4 LLFGKTGQVGWELQRSLAPVGNLIALD--VHS-K-------EFCGDFSNP------KGVAETVRKLRPDVIVNAAAHTAV 67 (298)
T ss_dssp EEECTTSHHHHHHHHHTTTTSEEEEEC--TTC-S-------SSCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCH
T ss_pred EEECCCCHHHHHHHHHHHhCCCEEEEE--CCC-c-------cccCcCCCH------HHHHHHHHHcCCCEEEEecccccc
Confidence 468888888888877775533221111 111 1 134788877 788877764 5999999997653
Q ss_pred ---ccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCccccccccc--ccccccCCCCChHHHHHHhhcCCccccccc
Q psy13944 87 ---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKK--IEEKFYEPLYTHIEMEQIINSCSHTELTVL 161 (1217)
Q Consensus 87 ---~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~--I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~ 161 (1217)
..........|+.++.+|+++|++. + .+++++||+.+++.... .+|...+.
T Consensus 68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~~~~~~~~~E~~~~~---------------------- 123 (298)
T d1n2sa_ 68 DKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFPGTGDIPWQETDATS---------------------- 123 (298)
T ss_dssp HHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSCCCTTCCBCTTSCCC----------------------
T ss_pred cccccCccccccccccccccchhhhhcc-c-cccccccccccccCCCCCCCccccccC----------------------
Confidence 4566778999999999999999874 3 57999999888775432 33322111
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCce
Q psy13944 162 NDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNI 241 (1217)
Q Consensus 162 tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~ 241 (1217)
..+.|+.+|..+|..+.++.. ...++|++..++.... +....+...+..+..... .+...
T Consensus 124 -------p~~~y~~~k~~~e~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~ 183 (298)
T d1n2sa_ 124 -------PLNVYGKTKLAGEKALQDNCP--KHLIFRTSWVYAGKGN---------NFAKTMLRLAKERQTLSV--INDQY 183 (298)
T ss_dssp -------CSSHHHHHHHHHHHHHHHHCS--SEEEEEECSEECSSSC---------CHHHHHHHHHHHCSEEEE--ECSCE
T ss_pred -------CCchHhhhhhhhhhhHHhhhc--ccccccccceeeccCC---------ccchhhhhhhcccceeec--cccee
Confidence 126799999999999988753 2345555555443211 111223333333333333 34678
Q ss_pred eccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHHHHHHHHh
Q psy13944 242 VDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNHVNYIKQN 320 (1217)
Q Consensus 242 ~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el~~~ia~~ 320 (1217)
.++++++|+++++..++..... . ...+..||++++ ..+..++++.+.+.
T Consensus 184 ~~~~~~~d~~~~~~~~i~~~~~----~--------------------------~~~~~~~n~~~~~~~~~~~~~~~i~~~ 233 (298)
T d1n2sa_ 184 GAPTGAELLADCTAHAIRVALN----K--------------------------PEVAGLYHLVAGGTTTWHDYAALVFDE 233 (298)
T ss_dssp ECCEEHHHHHHHHHHHHHHHHH----C--------------------------GGGCEEEECCCBSCEEHHHHHHHHHHH
T ss_pred ecccccchHHHHHHHHHhhhhc----c--------------------------ccccccccccCCCceecHHHHHHHHhh
Confidence 8999999999998877764433 1 113678999987 88889999998877
Q ss_pred hchh
Q psy13944 321 IKEK 324 (1217)
Q Consensus 321 ~g~~ 324 (1217)
.+..
T Consensus 234 ~~~~ 237 (298)
T d1n2sa_ 234 ARKA 237 (298)
T ss_dssp HHHH
T ss_pred hhcc
Confidence 6654
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=3e-11 Score=135.23 Aligned_cols=109 Identities=19% Similarity=0.189 Sum_probs=79.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.++.++.+|++|.. .++.+.. .+++|+|+||..+...+ +...+++|+.||.+++++|++. ++++|+|+
T Consensus 58 ~~~~~~~~Dl~d~~------~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ 130 (346)
T d1ek6a_ 58 RSVEFEEMDILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS 130 (346)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCcEEEEeeccccc------cccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Cccccccc
Confidence 57899999999853 5555543 46789999997664433 3467899999999999999997 89999999
Q ss_pred ccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 624 STAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 624 STa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
||+.++|...........+ .....+.|+.+|..+|..+..|
T Consensus 131 ss~~~~~~~~~~~~~~~~~--------------------------~~~~~~~Y~~~k~~~e~~~~~~ 171 (346)
T d1ek6a_ 131 SSATVYGNPQYLPLDEAHP--------------------------TGGCTNPYGKSKFFIEEMIRDL 171 (346)
T ss_dssp EEGGGGCSCSSSSBCTTSC--------------------------CCCCSSHHHHHHHHHHHHHHHH
T ss_pred ccceeeecccccccccccc--------------------------ccccCChHHHHHHHHHHHHHHH
Confidence 9999888754211110000 1122356999999988888654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.27 E-value=2e-11 Score=137.69 Aligned_cols=114 Identities=17% Similarity=0.085 Sum_probs=81.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc----hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF----DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVS 624 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f----~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vS 624 (1217)
....+..+|+++. +++..+.+++|+|||+|+.... ..........|+.||.++|++|++. ++++|||+|
T Consensus 58 ~~~~~~~~D~~~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~S 130 (363)
T d2c5aa1 58 FCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYAS 130 (363)
T ss_dssp TCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred ccCcEEEeechhH------HHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Ccccccccc
Confidence 4567888998874 3566777899999999986654 4555678889999999999999997 899999999
Q ss_pred cceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 625 TAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 625 Ta~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
|+.+++... +.+|...... ... .....+.|+.||.+||.+++.|.
T Consensus 131 S~~~~~~~~~~~~~~~~~~~~-------------------e~~---~~~p~~~Yg~sK~~~E~~~~~~~ 177 (363)
T d2c5aa1 131 SACIYPEFKQLETTNVSLKES-------------------DAW---PAEPQDAFGLEKLATEELCKHYN 177 (363)
T ss_dssp EGGGSCGGGSSSSSSCEECGG-------------------GGS---SBCCSSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccc-------------------cCC---cCCCCCHHHHHHHHHHHHHHHHH
Confidence 999998654 2222211000 000 01112469999999888886653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.27 E-value=1.2e-11 Score=136.55 Aligned_cols=109 Identities=16% Similarity=0.067 Sum_probs=80.6
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
..+++++.+||++.. .+..+.. ..++|+|+|+..... .....+++.|+.||.++|++|++.+..++|++
T Consensus 48 ~~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~ 121 (321)
T d1rpna_ 48 EGDIQYEDGDMADAC------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121 (321)
T ss_dssp GGGEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCCcEEEEccccChH------HhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCccccc
Confidence 357999999999854 4444433 468999999876543 34557889999999999999999866678999
Q ss_pred EccceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 623 VSTAYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 623 vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+||+.++|... ..+|+.+..| .+.|+.||.++|.+++.|.
T Consensus 122 ~Ss~~~~~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~ 163 (321)
T d1rpna_ 122 ASTSEMFGLIQAERQDENTPFYP-----------------------------RSPYGVAKLYGHWITVNYR 163 (321)
T ss_dssp EEEGGGGCSCSSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHH
T ss_pred ccchhhcCcccCCCCCCCCCccc-----------------------------cChhHHHHHHHHHHHHHHH
Confidence 99998887644 3445432222 2469999999888886653
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=7.7e-12 Score=130.57 Aligned_cols=187 Identities=13% Similarity=0.060 Sum_probs=137.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcc-cCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENAN-FTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~-~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~ 85 (1217)
.-.+|+.+.-|..+.++|.+...+ .++.|-.+..+. ...+++++.||++++ +++..+++++|+|||+++...
T Consensus 6 IlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~------~~l~~al~~~d~vi~~~g~~~ 79 (205)
T d1hdoa_ 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRN 79 (205)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTT
T ss_pred EEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccch------hhHHHHhcCCCEEEEEeccCC
Confidence 457899999999999999875322 233322222222 346699999999998 899999999999999998754
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccccccc
Q psy13944 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDIL 165 (1217)
Q Consensus 86 f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~ 165 (1217)
...+ ..++..++++++++|++ .++++||++||+.++++.... +.
T Consensus 80 ~~~~----~~~~~~~~~~l~~aa~~-~~v~r~i~~ss~~~~~~~~~~-----~~-------------------------- 123 (205)
T d1hdoa_ 80 DLSP----TTVMSEGARNIVAAMKA-HGVDKVVACTSAFLLWDPTKV-----PP-------------------------- 123 (205)
T ss_dssp CCSC----CCHHHHHHHHHHHHHHH-HTCCEEEEECCGGGTSCTTCS-----CG--------------------------
T ss_pred chhh----hhhhHHHHHHHHHHHHh-cCCCeEEEEeeeeccCCCccc-----cc--------------------------
Confidence 3332 24678899999999998 489999999999886653210 00
Q ss_pred CCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccc
Q psy13944 166 IKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMV 245 (1217)
Q Consensus 166 ~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~V 245 (1217)
.-..|...|..+|+++++ .+++.+|+||+.+++... . |.. .+..+++....+|
T Consensus 124 ---~~~~~~~~~~~~e~~l~~--~~~~~tiirp~~~~~~~~---~------------------~~~-~~~~~~~~~~~~i 176 (205)
T d1hdoa_ 124 ---RLQAVTDDHIRMHKVLRE--SGLKYVAVMPPHIGDQPL---T------------------GAY-TVTLDGRGPSRVI 176 (205)
T ss_dssp ---GGHHHHHHHHHHHHHHHH--TCSEEEEECCSEEECCCC---C------------------SCC-EEESSSCSSCSEE
T ss_pred ---cccccchHHHHHHHHHHh--cCCceEEEecceecCCCC---c------------------ccE-EEeeCCCCCCCcC
Confidence 002588999999999876 589999999999986421 1 111 2344566777899
Q ss_pred cHHHHHHHHHHHHHhhhh
Q psy13944 246 PGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 246 pVDdVvnAii~aa~~~~~ 263 (1217)
+++|+|++++.++.++..
T Consensus 177 ~~~DvA~~~~~~l~~~~~ 194 (205)
T d1hdoa_ 177 SKHDLGHFMLRCLTTDEY 194 (205)
T ss_dssp EHHHHHHHHHHTTSCSTT
T ss_pred CHHHHHHHHHHHhCCCCC
Confidence 999999999988876543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.25 E-value=1.3e-11 Score=138.62 Aligned_cols=127 Identities=17% Similarity=0.176 Sum_probs=85.2
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
....+.||++++. .+..++.++|+|+|+|+.+.+..+.......|+.||.++|++|++.+++++|||+||+.+.
T Consensus 63 ~~~~~~~Dl~~~~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~ 136 (342)
T d1y1pa1 63 FETAVVEDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSA 136 (342)
T ss_dssp EEEEECSCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGT
T ss_pred ccEEEeccccchh------hhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceee
Confidence 3566889999875 3566778999999999999998888888999999999999999998789999999997654
Q ss_pred cCcccccccccC--CCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 630 CNIKKIEEKFYE--PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 630 g~~~~I~E~~y~--~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+...+..+..+. ...+...........+....+ ..+.|+.||.+||.++..|.
T Consensus 137 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~---------p~~~Y~~sK~~~E~~~~~~~ 191 (342)
T d1y1pa1 137 LIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK---------SLWVYAASKTEAELAAWKFM 191 (342)
T ss_dssp CCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH---------HHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCccccccccccccccccccccccCCCC---------CcCcccchhHhHHHHHHHhh
Confidence 432221111111 111111111111111111111 11359999999999997764
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.21 E-value=1.7e-11 Score=127.63 Aligned_cols=195 Identities=13% Similarity=0.058 Sum_probs=133.7
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-hhHHHhhhc--CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKE--NANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK 85 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~--~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~ 85 (1217)
-+||+.+.-|..+.++|.+.... .+.+..|.. ......+++++.+|+.++ +++..+++++|.|||+|+...
T Consensus 7 lVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~a~~~~ 80 (252)
T d2q46a1 7 LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDA------DSINPAFQGIDALVILTSAVP 80 (252)
T ss_dssp EEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCC
T ss_pred EEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccc------cccccccccceeeEEEEeecc
Confidence 47899999999999999875433 344332221 233457899999999998 899999999999999998742
Q ss_pred cc----------------cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 86 FD----------------EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 86 f~----------------e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
.. ........+|+.|+.+++..+... ..+.+.+.|+...+...... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~-------~--------- 143 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDHPL-------N--------- 143 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTCGG-------G---------
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccc-cccccccccccccCCCCccc-------c---------
Confidence 11 112346688999999999999874 67788888876554321100 0
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcC
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLG 229 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G 229 (1217)
......|...+.+.+.+..+ .+++++|+||+.+||+.............
T Consensus 144 -----------------~~~~~~~~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~------------ 192 (252)
T d2q46a1 144 -----------------KLGNGNILVWKRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVRELLVGKDD------------ 192 (252)
T ss_dssp -----------------GGGGCCHHHHHHHHHHHHHH--SSSCEEEEEECEEECSCTTSSCEEEESTT------------
T ss_pred -----------------cccccchhhhhhhhhhhhhc--ccccceeecceEEECCCcchhhhhhccCc------------
Confidence 00113477788777776655 58999999999999986543221111000
Q ss_pred ceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 230 IMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 230 ~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
.......++||+||||++++.++.++..
T Consensus 193 ------~~~~~~~~~i~~~Dva~a~~~~l~~~~~ 220 (252)
T d2q46a1 193 ------ELLQTDTKTVPRADVAEVCIQALLFEEA 220 (252)
T ss_dssp ------GGGGSSCCEEEHHHHHHHHHHHTTCGGG
T ss_pred ------ccccCCCCeEEHHHHHHHHHHHhCCccc
Confidence 0012335689999999999988876554
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.20 E-value=5.3e-12 Score=132.05 Aligned_cols=188 Identities=17% Similarity=0.074 Sum_probs=125.1
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCccCC-
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAATVK- 85 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~v~- 85 (1217)
.-.||+.+.-|..+.++|.+.-.. .+...-|+. ....+++....+|+. +....+...+|+||||+|...
T Consensus 5 IlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~-~~~~~~~~~~~~d~~--------~~~~~~~~~~d~vi~~~g~~~~ 75 (212)
T d2a35a1 5 VLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA-LAEHPRLDNPVGPLA--------ELLPQLDGSIDTAFCCLGTTIK 75 (212)
T ss_dssp EEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC-CCCCTTEECCBSCHH--------HHGGGCCSCCSEEEECCCCCHH
T ss_pred EEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc-hhhcccccccccchh--------hhhhccccchheeeeeeeeecc
Confidence 347899999999999998874332 333322322 223345544444432 223445567899999998753
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCccccccccccc
Q psy13944 86 FDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDIL 165 (1217)
Q Consensus 86 f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~ 165 (1217)
.......+.+.|+.++.+++++|++ .++++|+|+||+.+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~a~~-~~v~~~i~~Ss~~~~~~~------------------------------------ 118 (212)
T d2a35a1 76 EAGSEEAFRAVDFDLPLAVGKRALE-MGARHYLVVSALGADAKS------------------------------------ 118 (212)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTCCTTC------------------------------------
T ss_pred ccccccccccchhhhhhhccccccc-cccccccccccccccccc------------------------------------
Confidence 2344567899999999999999998 599999999998764321
Q ss_pred CCCCCChHHHHHHHHHHHHHHhcCCCC-EEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceecc
Q psy13944 166 IKPMPNTYTLSKNACEQMVREKMDKLP-LGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDM 244 (1217)
Q Consensus 166 ~~~~PNtYa~SK~~AE~lv~~~~~gLP-vvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~ 244 (1217)
.+.|+.+|..+|+.+.+. +++ ++|+||+.|||+...+..++. +.......++ .....
T Consensus 119 ----~~~y~~~K~~~E~~l~~~--~~~~~~I~Rp~~v~G~~~~~~~~~~------------~~~~~~~~~~----~~~~~ 176 (212)
T d2a35a1 119 ----SIFYNRVKGELEQALQEQ--GWPQLTIARPSLLFGPREEFRLAEI------------LAAPIARILP----GKYHG 176 (212)
T ss_dssp ----SSHHHHHHHHHHHHHTTS--CCSEEEEEECCSEESTTSCEEGGGG------------TTCCCC--------CHHHH
T ss_pred ----ccchhHHHHHHhhhcccc--ccccceeeCCcceeCCcccccHHHH------------HHHHHhhccC----CCCcE
Confidence 156999999999998764 454 899999999998764321110 0111111111 12345
Q ss_pred ccHHHHHHHHHHHHHhhhh
Q psy13944 245 VPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 245 VpVDdVvnAii~aa~~~~~ 263 (1217)
|+|+|+|++++.++.+...
T Consensus 177 i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 177 IEACDLARALWRLALEEGK 195 (212)
T ss_dssp HHHHHHHHHHHHHHTCCCS
T ss_pred EEHHHHHHHHHHHHcCCCC
Confidence 9999999999988765443
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.20 E-value=3.7e-11 Score=133.52 Aligned_cols=108 Identities=13% Similarity=0.043 Sum_probs=79.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh--cCccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhc----CCCcE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR--EDVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEM----KNLDS 619 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~--~~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~----~~lk~ 619 (1217)
..++++.+|+++.. .+...+ .++|+|||+||...... ........|+.||.+++++|+.+ ....+
T Consensus 56 ~~~~~~~~Di~~~~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 129 (339)
T d1n7ha_ 56 ALMKLHYADLTDAS------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVK 129 (339)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCE
T ss_pred cceEEEEccccCHH------HHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhccccccccee
Confidence 56899999999853 455444 36799999999876553 34467889999999999999864 13447
Q ss_pred EEEEccceeecCcc-cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 620 FIYVSTAYSNCNIK-KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 620 fV~vSTa~v~g~~~-~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+++.||+++++... .++|..+..| .+.|+.||..+|.++..|.
T Consensus 130 ~~~~ss~~~~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~ 173 (339)
T d1n7ha_ 130 YYQAGSSEMFGSTPPPQSETTPFHP-----------------------------RSPYAASKCAAHWYTVNYR 173 (339)
T ss_dssp EEEEEEGGGGTTSCSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHH
T ss_pred eeecccceecccCCCCCCCCCCCCC-----------------------------cchhhHHHHHHHHHHHHHH
Confidence 88899998887655 5666543222 1359999999888886653
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.20 E-value=1.4e-11 Score=134.20 Aligned_cols=228 Identities=11% Similarity=0.005 Sum_probs=159.8
Q ss_pred cCCCcccCCCCCCcccHHHHHHHHhcChhHHHhhhc-----------CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCC
Q psy13944 5 RGKLGHNGAKTCKHNSILWVAKDFFADDAFDRLRKE-----------NANFTERIVVLTADLQSDGLGLDEKEKKVLRED 73 (1217)
Q Consensus 5 ~g~~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~-----------~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~ 73 (1217)
+-|.-+||+.+.-|..+.++|.+...+ +.-..|.. ......+++++.||+.+. +.+..++.+
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~------~~~~~~~~~ 75 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH------QRLVDALKQ 75 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCH------HHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECCCcccchhHHHHHhhhccCCcEEEEeecccc------hhhhhhccC
Confidence 345678999999999999999885322 21111111 111346799999999998 888899999
Q ss_pred ccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcC
Q psy13944 74 VNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153 (1217)
Q Consensus 74 VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l 153 (1217)
++.++|+++.... ..|..++.+++++|++. ...++++.||..++.... ..+
T Consensus 76 ~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~~-------~~~------------- 126 (312)
T d1qyda_ 76 VDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDIM-------EHA------------- 126 (312)
T ss_dssp CSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTSC-------CCC-------------
T ss_pred cchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEeeccccCCCc-------ccc-------------
Confidence 9999999986532 23666788899999885 456777778765543311 000
Q ss_pred CcccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeE
Q psy13944 154 SHTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRT 233 (1217)
Q Consensus 154 ~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~ 233 (1217)
......|..+|..+|+...+ .+++.+++||+.+||+...+...+.... ...+....
T Consensus 127 -------------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~r~~~~~g~~~~~~~~~~~~~---------~~~~~~~~ 182 (312)
T d1qyda_ 127 -------------LQPGSITFIDKRKVRRAIEA--ASIPYTYVSSNMFAGYFAGSLAQLDGHM---------MPPRDKVL 182 (312)
T ss_dssp -------------CSSTTHHHHHHHHHHHHHHH--TTCCBCEEECCEEHHHHTTTSSCTTCCS---------SCCSSEEC
T ss_pred -------------cchhhhhhHHHHHHHHhhcc--cccceEEeccceeecCCccchhhHHHHh---------hhcccccc
Confidence 11225688888888876655 5789999999999997654433222211 11233445
Q ss_pred EeeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccc-eeeccCC-ccCch
Q psy13944 234 VYQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDV-NYEINHG-NYDTT 311 (1217)
Q Consensus 234 i~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~-~YnI~sg-~~s~~ 311 (1217)
++++++..+++|+|+|+|++++.++.++.. .++ .|+++.+ .+|..
T Consensus 183 ~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~---------------------------------~~~~~~~~~~~~~~s~~ 229 (312)
T d1qyda_ 183 IYGDGNVKGIWVDEDDVGTYTIKSIDDPQT---------------------------------LNKTMYIRPPMNILSQK 229 (312)
T ss_dssp CBTTSCSEEEEECHHHHHHHHHHHTTCGGG---------------------------------SSSEEECCCGGGEEEHH
T ss_pred cccccccccceeeHHHHHHHHHHHhcCccc---------------------------------cCceEEEeCCCcCCCHH
Confidence 678899999999999999999998876544 133 4566666 78999
Q ss_pred HHHHHHHHhhchhh
Q psy13944 312 NHVNYIKQNIKEKF 325 (1217)
Q Consensus 312 el~~~ia~~~g~~~ 325 (1217)
|+++.+++.+|.+.
T Consensus 230 e~~~~~~~~~g~~~ 243 (312)
T d1qyda_ 230 EVIQIWERLSEQNL 243 (312)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHCCCC
Confidence 99999999998764
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=1.7e-10 Score=127.01 Aligned_cols=100 Identities=15% Similarity=0.134 Sum_probs=71.9
Q ss_pred CHHHHHHHhc--CccEEEEcCccccch----hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc--cccc
Q psy13944 566 DEKAKEVLRE--DVNIVFHVAATVKFD----EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEE 637 (1217)
Q Consensus 566 s~~~~~~L~~--~vdvVfH~AA~v~f~----~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~--~I~E 637 (1217)
+.+.+..+++ .+|+|||+|+.+... ....+.+..||.||.+||++|++. ++++|||+||..|||... +++|
T Consensus 42 ~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~~~~~E 120 (315)
T d1e6ua_ 42 DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAE 120 (315)
T ss_dssp CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCG
T ss_pred CHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCCCCccC
Confidence 3455665543 589999999876532 334467889999999999999997 899999999999998754 4566
Q ss_pred cccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCC-hhHHHHHHHHHHhhhhc
Q psy13944 638 KFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPN-TYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 638 ~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pN-tYt~SK~lAE~lv~~y~ 691 (1217)
...... ....|+ .|+.||.+||.+++.|.
T Consensus 121 ~~~~~~-------------------------~~~~~~~~Y~~sK~~~E~~~~~~~ 150 (315)
T d1e6ua_ 121 SELLQG-------------------------TLEPTNEPYAIAKIAGIKLCESYN 150 (315)
T ss_dssp GGTTSS-------------------------CCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CccccC-------------------------CCCCCCCHHHHHHHHHHHHHHHHH
Confidence 532110 001122 49999999888886653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.10 E-value=1.1e-10 Score=125.71 Aligned_cols=223 Identities=9% Similarity=0.023 Sum_probs=153.5
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcC-hhHHHhhh----------cCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCc
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFAD-DAFDRLRK----------ENANFTERIVVLTADLQSDGLGLDEKEKKVLREDV 74 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~-~vfd~Lr~----------~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~V 74 (1217)
-+.-+||+.+.-|..+.++|.+-..+ .++++-.. ........+.++.+|+.+. ......++++
T Consensus 4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~ 77 (307)
T d1qyca_ 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDH------ASLVEAVKNV 77 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCH------HHHHHHHHTC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccc------hhhhhhhhhc
Confidence 34568999999999999999874322 11111000 0011245689999999988 7778888899
Q ss_pred cEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCC
Q psy13944 75 NIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCS 154 (1217)
Q Consensus 75 DiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~ 154 (1217)
+.|+|+++.. ++.++.+++++++.. ..+.+++.||.......... .
T Consensus 78 ~~vi~~~~~~------------~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~~~-----~---------------- 123 (307)
T d1qyca_ 78 DVVISTVGSL------------QIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNVHA-----V---------------- 123 (307)
T ss_dssp SEEEECCCGG------------GSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSCCC-----C----------------
T ss_pred eeeeeccccc------------ccchhhHHHHHHHHh-ccccceeeeccccccccccc-----c----------------
Confidence 9999999864 334556778888875 66788888875443221100 0
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEE
Q psy13944 155 HTELTVLNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTV 234 (1217)
Q Consensus 155 d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i 234 (1217)
.....|...+..+|..+.+. +++.+|+||+.+||+...++..+. ....++....+
T Consensus 124 -------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~r~~~v~g~~~~~~~~~~----------~~~~~~~~~~~ 178 (307)
T d1qyca_ 124 -------------EPAKSVFEVKAKVRRAIEAE--GIPYTYVSSNCFAGYFLRSLAQAG----------LTAPPRDKVVI 178 (307)
T ss_dssp -------------TTHHHHHHHHHHHHHHHHHH--TCCBEEEECCEEHHHHTTTTTCTT----------CSSCCSSEEEE
T ss_pred -------------ccccccccccccccchhhcc--CCCceecccceecCCCccchhhhh----------hhhhhccccee
Confidence 00124677777788777664 789999999999998654432211 12234445567
Q ss_pred eeCCCceeccccHHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCC-ccCchHH
Q psy13944 235 YQNTSNIVDMVPGDLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHG-NYDTTNH 313 (1217)
Q Consensus 235 ~g~~~~~~D~VpVDdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg-~~s~~el 313 (1217)
++++++.+++|+++|+|++++.++.++.. . .+..|+++++ .+|..|+
T Consensus 179 ~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----~----------------------------~~~~~~~~~~~~~s~~ei 226 (307)
T d1qyca_ 179 LGDGNARVVFVKEEDIGTFTIKAVDDPRT----L----------------------------NKTLYLRLPANTLSLNEL 226 (307)
T ss_dssp ETTSCCEEEEECHHHHHHHHHTTSSCGGG----T----------------------------TEEEECCCGGGEEEHHHH
T ss_pred eecccccccCCcHHHHHHHHHHHhcChhh----c----------------------------CceeEEeCCCCccCHHHH
Confidence 78899999999999999999987765544 1 1234666776 8899999
Q ss_pred HHHHHHhhchhh
Q psy13944 314 VNYIKQNIKEKF 325 (1217)
Q Consensus 314 ~~~ia~~~g~~~ 325 (1217)
++.+.+.+|.+.
T Consensus 227 ~~~~~~~~G~~~ 238 (307)
T d1qyca_ 227 VALWEKKIDKTL 238 (307)
T ss_dssp HHHHHHHTTSCC
T ss_pred HHHHHHHHCCCC
Confidence 999999999763
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.09 E-value=4.1e-10 Score=124.19 Aligned_cols=76 Identities=22% Similarity=0.265 Sum_probs=57.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcC--ccEEEEcCccccchhc---HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRED--VNIVFHVAATVKFDEH---FQTAFEINCKGTEKLLKMAEEMKNLDSFIYV 623 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~--vdvVfH~AA~v~f~~~---~~~~~~~NV~GT~nLLelA~~~~~lk~fV~v 623 (1217)
.+++++.|||++.+ ++..++++ +|+|||+||.+..... .....++||.||.+||++|.+. +.+++++.
T Consensus 49 ~~~~~i~~Di~~~~------~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~ 121 (338)
T d1orra_ 49 GNFEFVHGDIRNKN------DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIY 121 (338)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred CCcEEEEcccCCHH------HHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccc
Confidence 57899999999853 56766654 5999999998776543 4578899999999999999998 45555554
Q ss_pred cc-ceeecC
Q psy13944 624 ST-AYSNCN 631 (1217)
Q Consensus 624 ST-a~v~g~ 631 (1217)
|| +.+++.
T Consensus 122 sS~~~~~~~ 130 (338)
T d1orra_ 122 SSTNKVYGD 130 (338)
T ss_dssp EEEGGGGTT
T ss_pred ccccccccc
Confidence 44 544443
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=98.94 E-value=2.7e-09 Score=118.99 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=77.2
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccch---hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFD---EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIY 622 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~---~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~ 622 (1217)
.++++++.|||+|++ .+.++.. .+++|+|+||...-. ........+|+.||.++|++|++.+..+.+++
T Consensus 55 ~~~i~~~~~Dl~d~~------~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~ 128 (356)
T d1rkxa_ 55 ADGMQSEIGDIRDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVN 128 (356)
T ss_dssp TTTSEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEE
T ss_pred ccCCeEEEeeccChH------hhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccc
Confidence 357999999999853 4555544 569999999976543 34457889999999999999999866777788
Q ss_pred EccceeecCcc---cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 623 VSTAYSNCNIK---KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 623 vSTa~v~g~~~---~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.||+.+++... +.+|.....| -+.|+.+|..+|..+..|
T Consensus 129 ~s~~~~~~~~~~~~~~~~~~~~~p-----------------------------~~~y~~~k~~~e~~~~~~ 170 (356)
T d1rkxa_ 129 ITSDKCYDNKEWIWGYRENEAMGG-----------------------------YDPYSNSKGCAELVTSSY 170 (356)
T ss_dssp ECCGGGBCCCCSSSCBCTTSCBCC-----------------------------SSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccCC-----------------------------CCccccccccchhhhhHH
Confidence 77776665443 2333221111 135999999988888654
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=6.3e-09 Score=110.21 Aligned_cols=75 Identities=9% Similarity=0.017 Sum_probs=63.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.++..+.+|+.+.+ ++...+.++|+|||+|+......+.....++|+.++.+++++|++. ++++|||+||..+
T Consensus 59 ~~i~~~~~D~~~~~------~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~ 131 (232)
T d2bkaa1 59 KNVNQEVVDFEKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGA 131 (232)
T ss_dssp GGCEEEECCGGGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTC
T ss_pred ceeeeeeecccccc------cccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCcccc
Confidence 46788888988743 4667778999999999988777777788999999999999999997 7999999999876
Q ss_pred ec
Q psy13944 629 NC 630 (1217)
Q Consensus 629 ~g 630 (1217)
+.
T Consensus 132 ~~ 133 (232)
T d2bkaa1 132 DK 133 (232)
T ss_dssp CT
T ss_pred cc
Confidence 43
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.58 E-value=4e-07 Score=97.65 Aligned_cols=98 Identities=18% Similarity=0.094 Sum_probs=70.4
Q ss_pred EcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccc---hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceee
Q psy13944 555 TADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKF---DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 555 ~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f---~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~ 629 (1217)
.+|+++. +.++.+++ ++|+||||||.+.. ..........|+.++.+|+++|++. + .+++++||+.++
T Consensus 37 ~~Dl~~~------~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~ 108 (298)
T d1n2sa_ 37 CGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVF 108 (298)
T ss_dssp CCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGS
T ss_pred cCcCCCH------HHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-cccccccccccc
Confidence 3677653 45666665 46999999997654 3444568899999999999999876 4 478999998877
Q ss_pred cCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 630 CNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 630 g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
+... +.+|...+.| .+.|+.+|..+|..++.
T Consensus 109 ~~~~~~~~~E~~~~~p-----------------------------~~~y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 109 PGTGDIPWQETDATSP-----------------------------LNVYGKTKLAGEKALQD 141 (298)
T ss_dssp CCCTTCCBCTTSCCCC-----------------------------SSHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCccccccCC-----------------------------CchHhhhhhhhhhhHHh
Confidence 6544 4555533222 14699999997777744
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.51 E-value=4.6e-07 Score=100.81 Aligned_cols=226 Identities=12% Similarity=0.002 Sum_probs=150.1
Q ss_pred CCcccCCCCCCcccHHHHHHHHhcChhHHHhhhc------CcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEc
Q psy13944 7 KLGHNGAKTCKHNSILWVAKDFFADDAFDRLRKE------NANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHV 80 (1217)
Q Consensus 7 ~~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~------~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~ 80 (1217)
+.-+||+.+.-|..+.++|.+-..+ +.-..|.. ......+++++.||+.++ .+.++.++.+++.+++.
T Consensus 5 tIlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~-----~~~~~~a~~~~~~~~~~ 78 (350)
T d1xgka_ 5 TIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN-----VPLMDTLFEGAHLAFIN 78 (350)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCSHHHHHHHTSTTEEEEESCCTTC-----HHHHHHHHTTCSEEEEC
T ss_pred EEEEECCChHHHHHHHHHHHhCCCe-EEEEECCcchhhhhhhcccCCCEEEEeeCCCc-----HHHHHHHhcCCceEEee
Confidence 4558999999999999999874222 21111211 112346799999999987 13467788999999887
Q ss_pred CccCCcccCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccc
Q psy13944 81 AATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTV 160 (1217)
Q Consensus 81 AA~v~f~e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~ 160 (1217)
..... ..|+.++.+++++|++. +++++++.||........
T Consensus 79 ~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~------------------------------ 118 (350)
T d1xgka_ 79 TTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYG------------------------------ 118 (350)
T ss_dssp CCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTS------------------------------
T ss_pred ccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeeccccccCC------------------------------
Confidence 65422 23677889999999985 677788888754322110
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHHhcCCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCcee-EEeeCCC
Q psy13944 161 LNDILIKPMPNTYTLSKNACEQMVREKMDKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMR-TVYQNTS 239 (1217)
Q Consensus 161 ~tp~~~~~~PNtYa~SK~~AE~lv~~~~~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~-~i~g~~~ 239 (1217)
......|..+|...|..+.+. +++.+++||+..++....+..+..... ....|... ..+.+++
T Consensus 119 ------~~~~~~~~~~k~~~~~~~~~~--~~~~~~vr~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 182 (350)
T d1xgka_ 119 ------PWPAVPMWAPKFTVENYVRQL--GLPSTFVYAGIYNNNFTSLPYPLFQME--------LMPDGTFEWHAPFDPD 182 (350)
T ss_dssp ------SCCCCTTTHHHHHHHHHHHTS--SSCEEEEEECEEGGGCBSSSCSSCBEE--------ECTTSCEEEEESSCTT
T ss_pred ------cccchhhhhhHHHHHHHHHhh--ccCceeeeeceeecccccccccccccc--------ccccccceeeecccCC
Confidence 011134778899999887764 689999999998875432221111100 01122222 3445677
Q ss_pred ceeccccH-HHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCchhhhhhhhccceeeccCCccCchHHHHHHH
Q psy13944 240 NIVDMVPG-DLVVNILLAAAWDVARRVKKLDTITRSDQNVEAKLIDPNNNVEEESIKKLDVNYEINHGNYDTTNHVNYIK 318 (1217)
Q Consensus 240 ~~~D~VpV-DdVvnAii~aa~~~~~~~~~~~~~~~~~~~~~~hl~np~~~~~~~~~~~~g~~YnI~sg~~s~~el~~~ia 318 (1217)
....++++ +|++.++..++..... +..|+.|++++..+|..|+++.+.
T Consensus 183 ~~~~~i~~~~Dva~~v~~~l~~~~~-------------------------------~~~G~~~~~~g~~~T~~eia~~l~ 231 (350)
T d1xgka_ 183 IPLPWLDAEHDVGPALLQIFKDGPQ-------------------------------KWNGHRIALTFETLSPVQVCAAFS 231 (350)
T ss_dssp SCEEEECHHHHHHHHHHHHHHHCHH-------------------------------HHTTCEEEECSEEECHHHHHHHHH
T ss_pred CcceEEEeHHHHHHHHHHHHhCChh-------------------------------hcCCeEEEEeCCcCCHHHHHHHHH
Confidence 88888875 8999998877765332 013778888877899999999999
Q ss_pred Hhhchhh
Q psy13944 319 QNIKEKF 325 (1217)
Q Consensus 319 ~~~g~~~ 325 (1217)
+.+|++.
T Consensus 232 ~~~G~~v 238 (350)
T d1xgka_ 232 RALNRRV 238 (350)
T ss_dssp HHHTSCE
T ss_pred HHHCCcc
Confidence 9999873
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=6.8e-07 Score=92.27 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=58.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.||++++ +++.+++.++|+|||+++......+ ..++..|+++++++|++. ++++||++||+.+
T Consensus 46 ~~~~~~~gD~~d~------~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~ 114 (205)
T d1hdoa_ 46 RPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFL 114 (205)
T ss_dssp CCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGG
T ss_pred cccccccccccch------hhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEeeeec
Confidence 4588999999985 4788888999999999986543222 245788999999999997 8999999999887
Q ss_pred ecC
Q psy13944 629 NCN 631 (1217)
Q Consensus 629 ~g~ 631 (1217)
+++
T Consensus 115 ~~~ 117 (205)
T d1hdoa_ 115 LWD 117 (205)
T ss_dssp TSC
T ss_pred cCC
Confidence 665
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.43 E-value=6.1e-06 Score=87.76 Aligned_cols=106 Identities=21% Similarity=0.186 Sum_probs=70.9
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhc--CccEEEEcCccccchh---cHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLRE--DVNIVFHVAATVKFDE---HFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVST 625 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~~--~vdvVfH~AA~v~f~~---~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vST 625 (1217)
.+++.-|..+.++ .+.++++++++ ++|+|||+||...... ........|+.++.++++.++.. ...+++.||
T Consensus 26 ~~Vi~~~r~~~D~-~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss 102 (281)
T d1vl0a_ 26 VEVIPTDVQDLDI-TNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQIST 102 (281)
T ss_dssp EEEEEECTTTCCT-TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEE
T ss_pred CEEEEeechhccC-CCHHHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc--ccccccccc
Confidence 4445445444332 23456666665 5699999999776443 34467889999999999999875 457888888
Q ss_pred ceeecCcc--cccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhh
Q psy13944 626 AYSNCNIK--KIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICL 688 (1217)
Q Consensus 626 a~v~g~~~--~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~ 688 (1217)
..+++... +..|...+.| .+.|+.+|..+|.++.
T Consensus 103 ~~v~~~~~~~~~~e~~~~~~-----------------------------~~~~~~~k~~~e~~~~ 138 (281)
T d1vl0a_ 103 DYVFDGEAKEPITEFDEVNP-----------------------------QSAYGKTKLEGENFVK 138 (281)
T ss_dssp GGGSCSCCSSCBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHH
T ss_pred ceeeeccccccccccccccc-----------------------------hhhhhhhhhHHHHHHH
Confidence 88777643 3444432222 2359999998777763
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.17 E-value=7.6e-06 Score=87.62 Aligned_cols=86 Identities=24% Similarity=0.244 Sum_probs=59.8
Q ss_pred cCccEEEEcCccccch-hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcc--cccccccCCCCChhHHHH
Q psy13944 575 EDVNIVFHVAATVKFD-EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIK--KIEEKFYEPLYTHIEMEQ 651 (1217)
Q Consensus 575 ~~vdvVfH~AA~v~f~-~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~--~I~E~~y~~p~~p~~~~~ 651 (1217)
..+++|+|+||..... .+.......|+.|+.+++++|+.. +++ +++.||+.+++... ..+|....
T Consensus 67 ~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~~~~~~~~~---------- 134 (307)
T d1eq2a_ 67 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSDFIESREYE---------- 134 (307)
T ss_dssp SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSCBCSSGGGC----------
T ss_pred cchhhhhhhcccccccccccccccccccccccccccccccc-ccc-cccccccccccccccccccccccc----------
Confidence 4679999999976543 344467788999999999999986 564 67777766665432 22222211
Q ss_pred HHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 652 IINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 652 l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
...+.|+.+|.++|.++..|.
T Consensus 135 -------------------~~~~~Y~~~K~~~e~~~~~~~ 155 (307)
T d1eq2a_ 135 -------------------KPLNVYGYSKFLFDEYVRQIL 155 (307)
T ss_dssp -------------------CCSSHHHHHHHHHHHHHHHHG
T ss_pred -------------------ccccccccccchhhhhccccc
Confidence 223579999999888886653
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.95 E-value=5.5e-06 Score=85.31 Aligned_cols=91 Identities=13% Similarity=0.042 Sum_probs=70.0
Q ss_pred HHhcCccEEEEcCccccc-hhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccceeecCcccccccccCCCCChhHHH
Q psy13944 572 VLREDVNIVFHVAATVKF-DEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 650 (1217)
Q Consensus 572 ~L~~~vdvVfH~AA~v~f-~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~ 650 (1217)
.+...+|+||||+|.... ........++|+.++.+++++|++. ++++|+|+||+.+++.
T Consensus 58 ~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~------------------- 117 (212)
T d2a35a1 58 QLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK------------------- 117 (212)
T ss_dssp GCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-------------------
T ss_pred ccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccc-------------------
Confidence 344568999999986543 3334577889999999999999997 8999999999876542
Q ss_pred HHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCC-ceeEeccCccc
Q psy13944 651 QIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDR-GVRVCRNHPVG 715 (1217)
Q Consensus 651 ~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l-~~~i~rp~~v~ 715 (1217)
..+.|+.||+.+|..++. .++ ...|+||..|-
T Consensus 118 ---------------------~~~~y~~~K~~~E~~l~~------------~~~~~~~I~Rp~~v~ 150 (212)
T d2a35a1 118 ---------------------SSIFYNRVKGELEQALQE------------QGWPQLTIARPSLLF 150 (212)
T ss_dssp ---------------------CSSHHHHHHHHHHHHHTT------------SCCSEEEEEECCSEE
T ss_pred ---------------------cccchhHHHHHHhhhccc------------cccccceeeCCccee
Confidence 123599999999998843 134 37899998884
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.88 E-value=1.9e-05 Score=84.06 Aligned_cols=184 Identities=14% Similarity=0.115 Sum_probs=122.0
Q ss_pred ccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCccEE
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNIV 77 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDiV 77 (1217)
+||+.+--|....++|.+...+ .--+.+++...+..+++.++.+|++++ ++++.++ ..+|++
T Consensus 11 ITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~idil 84 (244)
T d1nffa_ 11 VSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQP------AQWKAAVDTAVTAFGGLHVL 84 (244)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEE
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCH------HHHHHHHHHHHHHhCCCeEE
Confidence 7898888899999999884332 112233322233446788999999998 7766554 357999
Q ss_pred EEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChHHHH
Q psy13944 78 FHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEME 147 (1217)
Q Consensus 78 iH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~ 147 (1217)
+|+||.... .+.++..+++|+.|+..+.+.+.. | .+--++|++||........
T Consensus 85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----------------- 147 (244)
T d1nffa_ 85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------------- 147 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------------
T ss_pred EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc-----------------
Confidence 999998532 133568999999999998876532 2 2234799999976532110
Q ss_pred HHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 148 QIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 148 ~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
....|+.||+..+.+.+..+ .|+.+..+-|+.|-.+..+..+...
T Consensus 148 ---------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~--------- 197 (244)
T d1nffa_ 148 ---------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI--------- 197 (244)
T ss_dssp ---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC---------
T ss_pred ---------------------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH---------
Confidence 01369999999988876654 6789999999877654332211100
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
.+ ....-+...+|++++++.++..
T Consensus 198 --------~~------~pl~R~~~p~diA~~v~fL~s~ 221 (244)
T d1nffa_ 198 --------FQ------TALGRAAEPVEVSNLVVYLASD 221 (244)
T ss_dssp --------SC------CSSSSCBCHHHHHHHHHHHHSG
T ss_pred --------Hh------ccccCCCCHHHHHHHHHHHhCh
Confidence 00 1112267789999998877754
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=97.78 E-value=5.1e-05 Score=80.32 Aligned_cols=182 Identities=14% Similarity=0.132 Sum_probs=118.3
Q ss_pred ccCCCCCCcccHHHHHHHHhcC---------------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc---
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD---------------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR--- 71 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~---------------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~--- 71 (1217)
+||+...-|....++|.+...+ .-.+.+.++....-.++.++.+|++++ ++++.++
T Consensus 6 ITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~------~~v~~~~~~~ 79 (240)
T d2bd0a1 6 ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDM------ADVRRLTTHI 79 (240)
T ss_dssp EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSH------HHHHHHHHHH
T ss_pred EccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH------HHHHHHHHHH
Confidence 5788888888888888764321 111223333233345788999999998 7766554
Q ss_pred ----CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 72 ----EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 72 ----~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
..+|++||+|+.... .+.++..+++|+.|+..+.+.+... .+--++|++||.......
T Consensus 80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-------- 151 (240)
T d2bd0a1 80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF-------- 151 (240)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC--------
Confidence 358999999998532 1345689999999999988777532 123489999997653211
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
| ....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+..+..+
T Consensus 152 --~----------------------------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~-- 199 (240)
T d2bd0a1 152 --R----------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-- 199 (240)
T ss_dssp --T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC--
T ss_pred --C----------------------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC--
Confidence 0 01369999988777765543 6788888999877544221110
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.+....+...+|+|++++.++..+.
T Consensus 200 -------------------------~~~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 200 -------------------------DEMQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp -------------------------STTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred -------------------------HhhHhcCCCHHHHHHHHHHHHcCCc
Confidence 0111224456999999988776544
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.77 E-value=3.3e-05 Score=82.17 Aligned_cols=191 Identities=19% Similarity=0.154 Sum_probs=124.0
Q ss_pred cCCCcccCCCCCCcccHHHHHHHHhcChhH------------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC
Q psy13944 5 RGKLGHNGAKTCKHNSILWVAKDFFADDAF------------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE 72 (1217)
Q Consensus 5 ~g~~g~tg~r~kkg~~~~eRL~~~l~~~vf------------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~ 72 (1217)
.|..-+||+.+.-|....++|.+-....+. ..+.++....-.++.++.+|++++ ++.+.+++
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~------~~~~~~~~ 82 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDR------ESVRELLG 82 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHH
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchH------HHHHHhhc
Confidence 456668898888888999888774432111 111111122335789999999998 67766643
Q ss_pred ------CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 ------DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ------~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|.|+|+|+.... . +.++..+++|+.|+.++.++++. ....++|++||.......
T Consensus 83 ~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~-~~~~~iv~~SS~a~~~g~---------- 151 (259)
T d2fr1a1 83 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE-LDLTAFVLFSSFASAFGA---------- 151 (259)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT-SCCSEEEEEEEHHHHTCC----------
T ss_pred cccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc-cCCceEeeecchhhccCC----------
Confidence 36899999998632 1 22456788999999999998876 366799999997643211
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
+ . -..|+.+|+..|.+.++.. .|+++..+.|+.+.++.. .+..
T Consensus 152 ~---------------------------~-~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~------~~~~-- 195 (259)
T d2fr1a1 152 P---------------------------G-LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGM------AEGP-- 195 (259)
T ss_dssp T---------------------------T-CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----------------
T ss_pred c---------------------------c-cHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCcc------ccch--
Confidence 0 0 1259999999999988776 899999999987765421 1100
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
+.. . + . ..-...++.+++++++..++....
T Consensus 196 ----~~~----~---~--~-~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 196 ----VAD----R---F--R-RHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp ---------------C--T-TTTEECBCHHHHHHHHHHHHHTTC
T ss_pred ----HHH----H---H--H-hcCCCCCCHHHHHHHHHHHHhCCC
Confidence 000 0 0 0 111235788999998887776533
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=97.69 E-value=2.5e-05 Score=83.66 Aligned_cols=67 Identities=13% Similarity=-0.007 Sum_probs=51.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
.+++++.||+++. +.+.....+++++||+++.... ..|+.++.++++.|++. +..++++.||..+
T Consensus 54 ~~v~~v~~d~~d~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~ 118 (312)
T d1qyda_ 54 LGAKLIEASLDDH------QRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGM 118 (312)
T ss_dssp TTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSCCSS
T ss_pred CCcEEEEeecccc------hhhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEeeccc
Confidence 4689999999985 4677888999999999986432 34777888999999987 4556777787655
Q ss_pred ec
Q psy13944 629 NC 630 (1217)
Q Consensus 629 ~g 630 (1217)
++
T Consensus 119 ~~ 120 (312)
T d1qyda_ 119 DP 120 (312)
T ss_dssp CT
T ss_pred cC
Confidence 43
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.68 E-value=8.9e-05 Score=78.71 Aligned_cols=152 Identities=17% Similarity=0.147 Sum_probs=103.1
Q ss_pred ccCCCCCCcccHHHHHHHHhcChh-H-----HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCccE
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDA-F-----DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNI 76 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~v-f-----d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDi 76 (1217)
+||+...-|....++|.+..-+.+ . +...+...+.-.++..+.+|++++ ++.+.++ ..+|+
T Consensus 10 VTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~------~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 10 ITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQP------GDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCE
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCH------HHHHHHHHHHHHHcCCCCE
Confidence 788888889999999987332211 0 111111123346889999999998 7777664 46899
Q ss_pred EEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 77 VFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 77 ViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
+||+||.... . +.++..+++|+.|+..+.+++... .+--++|++||...... .|
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~----------~~------ 147 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK----------IE------ 147 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC----------CS------
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc----------Cc------
Confidence 9999998532 2 346689999999999988876432 23358999999765321 00
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCC
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVV 205 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~ 205 (1217)
....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+.
T Consensus 148 ----------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 189 (247)
T d2ew8a1 148 ----------------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 189 (247)
T ss_dssp ----------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred ----------------------ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 11369999998887776544 67899999999876553
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.58 E-value=0.00016 Score=76.90 Aligned_cols=191 Identities=12% Similarity=0.115 Sum_probs=122.1
Q ss_pred ccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
+||+.+.-|....++|.+.... .-.+.+.++....-.++..+.+|++++ ++++.++ ..+
T Consensus 15 ITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 15 VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK------EEISEVINKILTEHKNV 88 (251)
T ss_dssp EESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCH------HHHHHHHHHHHHHCSCC
T ss_pred EeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHhcCCc
Confidence 7888888888888888763322 112222233333445789999999998 7776655 368
Q ss_pred cEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 75 NIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 75 DiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
|++||.|+.... .+.++..+++|+.|+..+.+++... .+--++|++||....... |
T Consensus 89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~----------~---- 154 (251)
T d2c07a1 89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----------V---- 154 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T----
T ss_pred eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC----------C----
Confidence 999999997532 1346688999999999888876431 233589999997653210 0
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
.-..|+.||+.-+.+.+..+ .|+.+..+.|+.|-.+..+. . +
T Consensus 155 ------------------------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~-------~--~ 201 (251)
T d2c07a1 155 ------------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-------I--S 201 (251)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------C--C
T ss_pred ------------------------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc-------c--C
Confidence 01259999999988876654 68999999999886653221 1 1
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
......+.... + ..-+...+|++++++.++...+
T Consensus 202 ~~~~~~~~~~~----p-----l~R~~~pedvA~~v~fL~S~~s 235 (251)
T d2c07a1 202 EQIKKNIISNI----P-----AGRMGTPEEVANLACFLSSDKS 235 (251)
T ss_dssp HHHHHHHHTTC----T-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCchh
Confidence 12222222221 1 1125678999999887775433
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=97.57 E-value=0.00028 Score=75.44 Aligned_cols=197 Identities=13% Similarity=0.067 Sum_probs=123.7
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
|| +=+||+.+.-|....++|.+...+ ...+.+.++....-.++..+.+|++++ ++.+.+++
T Consensus 7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~------~~v~~~~~~~~ 80 (261)
T d1geea_ 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE------SDVINLVQSAI 80 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH------HHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHH
Confidence 45 337888888899999999873321 112222222223345788999999998 77776653
Q ss_pred ----CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c---CCCCeEEEEcCccccccccccccccc
Q psy13944 73 ----DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 ----~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|++||+|+.... . +.++..+++|+.|+..+.+.+.. | +.-..+|++||.......
T Consensus 81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~-------- 152 (261)
T d1geea_ 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-------- 152 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC--------
T ss_pred HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC--------
Confidence 67999999998532 1 23568899999999988877643 2 233458889997643210
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
| ....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+...
T Consensus 153 --~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~----- 197 (261)
T d1geea_ 153 --P----------------------------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA----- 197 (261)
T ss_dssp --T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH-----
T ss_pred --c----------------------------cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh-----
Confidence 0 01369999999988876653 6899999999987544211
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
...........+.... + ..-+...+|+|++++.++....
T Consensus 198 --~~~~~~~~~~~~~~~~----p-----l~R~~~pediA~~v~fL~S~~s 236 (261)
T d1geea_ 198 --EKFADPEQRADVESMI----P-----MGYIGEPEEIAAVAAWLASSEA 236 (261)
T ss_dssp --HHHHSHHHHHHHHTTC----T-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred --hhcCCHHHHHHHHhcC----C-----CCCCCCHHHHHHHHHHHhCchh
Confidence 0111111112221110 1 1125578999999988775433
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.55 E-value=0.00035 Score=73.78 Aligned_cols=189 Identities=15% Similarity=0.033 Sum_probs=120.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCccE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNI 76 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDi 76 (1217)
=+||+.+.-|....++|.+..-+.+ -+.+.+... .-+...+.+|++++ ++++.++ ..+|+
T Consensus 9 lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~--~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDi 80 (242)
T d1ulsa_ 9 LITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE--AVGAHPVVMDVADP------ASVERGFAEALAHLGRLDG 80 (242)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--TTTCEEEECCTTCH------HHHHHHHHHHHHHHSSCCE
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HcCCeEEEEecCCH------HHHHHHHHHHHHhcCCceE
Confidence 4789888899999999988433211 122222211 12567899999998 7777654 35799
Q ss_pred EEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 77 VFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 77 ViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
+||+||.... . +.++..+++|+.|+..+.+.+.+. .+-..++.+||+...+..
T Consensus 81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~----------------- 143 (242)
T d1ulsa_ 81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL----------------- 143 (242)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-----------------
T ss_pred EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC-----------------
Confidence 9999997532 1 235689999999999998876542 233456677775432210
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHH
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTA 221 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~ 221 (1217)
....|+.||+.-+.+.+..+ .++.+..+.|+.|-.+.....+ ..
T Consensus 144 ----------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~---------~~ 192 (242)
T d1ulsa_ 144 ----------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---------EK 192 (242)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---------HH
T ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC---------HH
Confidence 01369999999888876543 6799999999988665432211 11
Q ss_pred HHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 222 MYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 222 li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
......... + ..-+.-.+|++++++.++....
T Consensus 193 ~~~~~~~~~----p-----l~R~~~pedia~~v~fL~S~~s 224 (242)
T d1ulsa_ 193 VREKAIAAT----P-----LGRAGKPLEVAYAALFLLSDES 224 (242)
T ss_dssp HHHHHHHTC----T-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhcC----C-----CCCCCCHHHHHHHHHHHhchhh
Confidence 112222111 1 1124567899999887775433
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.50 E-value=7.1e-05 Score=79.95 Aligned_cols=155 Identities=15% Similarity=0.104 Sum_probs=108.3
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcCh-----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFADD-----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~~-----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
.|| +=+||+.+.-|....++|.+..-+. --+.+.+...+.-.++.++.+|++++ ++.+.++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE------EDWQRVVAYAREEF 77 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCH------HHHHHHHHHHHHHc
Confidence 355 3488999889999999998743321 11333333334456789999999998 7777665
Q ss_pred CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
..+|++||+|+.... .+.++..+++|+.|+..+.+.+... .+--++|++||....... |
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~----------~- 146 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL----------A- 146 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T-
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc----------c-
Confidence 368999999997532 1235588999999999988877431 234599999997653211 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
....|+.||+..+.+.+..+ .++.+..+-|+.|-.
T Consensus 147 ---------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T 186 (254)
T d1hdca_ 147 ---------------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYT 186 (254)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred ---------------------------chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccC
Confidence 11369999999888876654 678888899987643
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.49 E-value=0.00022 Score=76.02 Aligned_cols=202 Identities=16% Similarity=0.143 Sum_probs=126.2
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc----
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR---- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---- 71 (1217)
+|| +-+||+..--|....++|.+...+ .-.+.+.++......++.++.+|++++ ++++.++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~------~~~~~~~~~~~ 78 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR------TERDKLMQTVA 78 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCH------HHHHHHHHHHH
Confidence 465 458888888888999998874321 112233333344456788999999998 6665443
Q ss_pred ----CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 72 ----EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 72 ----~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
..+|+++|+|+.... .+.++..+++|+.|+..+.+++... +.--++|++||.......
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~-------- 150 (258)
T d1ae1a_ 79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-------- 150 (258)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC--------
T ss_pred HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc--------
Confidence 247999999998532 2346689999999999988876532 344589999997653211
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMW 212 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGW 212 (1217)
| ....|+.+|+.-+.+.+..+ .++.+-.+.|+.|..+..+..
T Consensus 151 --~----------------------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--- 197 (258)
T d1ae1a_ 151 --P----------------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA--- 197 (258)
T ss_dssp --T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------
T ss_pred --c----------------------------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhh---
Confidence 0 11369999999888876654 678999999998876543221
Q ss_pred ccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 213 VKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 213 idn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
..........+..+.... ...-+...+|+|++++.++....
T Consensus 198 ~~~~~~~~~~~~~~~~~~---------plgR~~~pediA~~v~fL~S~~s 238 (258)
T d1ae1a_ 198 IKKNPHQKEEIDNFIVKT---------PMGRAGKPQEVSALIAFLCFPAA 238 (258)
T ss_dssp ------CHHHHHHHHHHS---------TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred hhhhhhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhChhh
Confidence 111111122333322210 11126789999999988775433
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.45 E-value=0.00028 Score=74.89 Aligned_cols=197 Identities=13% Similarity=0.083 Sum_probs=122.6
Q ss_pred CCC-cccCCCCCCcccHHHHHHHHhcChh-----HHHhh----hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc----
Q psy13944 6 GKL-GHNGAKTCKHNSILWVAKDFFADDA-----FDRLR----KENANFTERIVVLTADLQSDGLGLDEKEKKVLR---- 71 (1217)
Q Consensus 6 g~~-g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr----~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---- 71 (1217)
||. =+||+.+--|....++|.+...+.+ -+.+. +.....-.++..+.+|++++ ++++.++
T Consensus 5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~------~~v~~~~~~~~ 78 (251)
T d1vl8a_ 5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY------EEVKKLLEAVK 78 (251)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH------HHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCH------HHHHHHHHHHH
Confidence 453 3788888889999999988433211 11111 11122345788999999998 7776665
Q ss_pred ---CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccC
Q psy13944 72 ---EDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 72 ---~~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
..+|++||+||.... . +.++..+++|+.|+..+.+.+.. | .+--++|++||....-. +
T Consensus 79 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~---------~ 149 (251)
T d1vl8a_ 79 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV---------T 149 (251)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC---------C
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc---------c
Confidence 358999999997532 1 23568899999999999887643 3 22348999988543110 0
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWV 213 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWi 213 (1217)
.+ ....|+.||+.-+.+.+..+ .|+.+..+-|+.|-.+..+.
T Consensus 150 ~~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~----- 196 (251)
T d1vl8a_ 150 MP----------------------------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA----- 196 (251)
T ss_dssp SS----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH-----
T ss_pred Cc----------------------------cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHh-----
Confidence 00 01369999999988876653 68999999999886553211
Q ss_pred cccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 214 KGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 214 dn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
..........+.... + ..-+.-.+|++++++.++...
T Consensus 197 --~~~~~~~~~~~~~~~----p-----l~R~~~pedvA~~v~fL~S~~ 233 (251)
T d1vl8a_ 197 --VFSDPEKLDYMLKRI----P-----LGRTGVPEDLKGVAVFLASEE 233 (251)
T ss_dssp --HHTCHHHHHHHHHTC----T-----TSSCBCGGGGHHHHHHHHSGG
T ss_pred --ccCCHHHHHHHHhcC----C-----CCCCCCHHHHHHHHHHHhCch
Confidence 111112222222211 1 112445789999988776543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=4.7e-05 Score=80.72 Aligned_cols=194 Identities=14% Similarity=0.080 Sum_probs=123.5
Q ss_pred CCC-cccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------
Q psy13944 6 GKL-GHNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE------- 72 (1217)
Q Consensus 6 g~~-g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~------- 72 (1217)
||. =+||+.+.-|....++|.+..-+.+ -+.+.+...+...+...+.+|++++ ++.+.+++
T Consensus 4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g 77 (243)
T d1q7ba_ 4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDP------ASIESVLEKIRAEFG 77 (243)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH------HHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCH------HHhhhhhhhhhcccC
Confidence 453 3789988889999999987433211 1222222222345678899999998 77665543
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
.+|++||.|+.... .+.++..+++|+.|+..+.+.+... .+--++|++||....... |
T Consensus 78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~----------~-- 145 (243)
T d1q7ba_ 78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN----------G-- 145 (243)
T ss_dssp SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T--
T ss_pred CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC----------C--
Confidence 68999999987532 1345688999999999988877432 233589999997643210 0
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+..+.+.+..+ .++.+..+.|+.|-.+..+ ...
T Consensus 146 --------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~-------~~~ 192 (243)
T d1q7ba_ 146 --------------------------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR-------ALS 192 (243)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------TSC
T ss_pred --------------------------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh-------hhh
Confidence 01369999999888876654 6789999999877543211 111
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
......+... .+ ..-+...+|++++++.++...
T Consensus 193 --~~~~~~~~~~----~p-----l~R~~~pedvA~~v~fL~S~~ 225 (243)
T d1q7ba_ 193 --DDQRAGILAQ----VP-----AGRLGGAQEIANAVAFLASDE 225 (243)
T ss_dssp --HHHHHHHHTT----CT-----TSSCBCHHHHHHHHHHHHSGG
T ss_pred --hhHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHhCch
Confidence 1111122221 11 122567899999988777543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.45 E-value=5.8e-05 Score=79.76 Aligned_cols=188 Identities=12% Similarity=0.068 Sum_probs=121.2
Q ss_pred cccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCccEEEEcC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNIVFHVA 81 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDiViH~A 81 (1217)
=+||+.+.-|....++|.+.....+.- ....+..+++..+.+|++++ ++.+.++ ..+|++||+|
T Consensus 11 lITGas~GIG~aia~~la~~Ga~V~~~---~r~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDiLVnnA 81 (237)
T d1uzma1 11 LVTGGNRGIGLAIAQRLAADGHKVAVT---HRGSGAPKGLFGVEVDVTDS------DAVDRAFTAVEEHQGPVEVLVSNA 81 (237)
T ss_dssp EETTTTSHHHHHHHHHHHHTTCEEEEE---ESSSCCCTTSEEEECCTTCH------HHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEE---ECCcchhcCceEEEEecCCH------HHHHHHHHHHHHhcCCceEEEeee
Confidence 388999999999999998854432211 12245567889999999998 7766554 3579999999
Q ss_pred ccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhh
Q psy13944 82 ATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIIN 151 (1217)
Q Consensus 82 A~v~f-------~e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~ 151 (1217)
|.... .+.++..+++|+.|+..+.+.+.. + .+-.++|++||.......
T Consensus 82 G~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------------------- 139 (237)
T d1uzma1 82 GLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---------------------- 139 (237)
T ss_dssp SCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------------------
T ss_pred cccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC----------------------
Confidence 97522 234568899999999888765532 1 344589999997653210
Q ss_pred cCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHH
Q psy13944 152 SCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAV 226 (1217)
Q Consensus 152 ~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~ 226 (1217)
.....|+.||+.-+.+.+..+ .++.+..+.|+.|-.+..+.. ........
T Consensus 140 ----------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~---------~~~~~~~~ 194 (237)
T d1uzma1 140 ----------------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---------DERIQQGA 194 (237)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---------CHHHHHHH
T ss_pred ----------------cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc---------CHHHHHHH
Confidence 011369999998888776543 678888999987754321110 01111111
Q ss_pred hcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 227 GLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 227 ~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
... ++ ..-+.-.+|++++++.++...
T Consensus 195 ~~~----~p-----l~R~~~pedvA~~v~fL~S~~ 220 (237)
T d1uzma1 195 LQF----IP-----AKRVGTPAEVAGVVSFLASED 220 (237)
T ss_dssp GGG----CT-----TCSCBCHHHHHHHHHHHHSGG
T ss_pred Hhc----CC-----CCCCcCHHHHHHHHHHHhCch
Confidence 111 11 112566799999988777543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.45 E-value=0.00021 Score=76.33 Aligned_cols=156 Identities=15% Similarity=0.194 Sum_probs=101.3
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc----
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR---- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---- 71 (1217)
.|| +=+||+.+.-|....++|.+.... .-.+.+.++......++..+.+|++++ ++.+.++
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~ 80 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR------PEREKLMQTVS 80 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH------HHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCH------HHHHHHHHHHH
Confidence 355 348899988999999999874321 112222222233345789999999997 6655443
Q ss_pred ----CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 72 ----EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 72 ----~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
..+|+++|+||.... .+.++..+++|+.|+..+.+.+... .+--++|++||.......
T Consensus 81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-------- 152 (259)
T d1xq1a_ 81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-------- 152 (259)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------------
T ss_pred HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc--------
Confidence 348999999997532 1346689999999999988876532 233589999997542110
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.....|+.||+..+.+.+..+ .|+.+..+-|+.|-.+
T Consensus 153 ------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~ 194 (259)
T d1xq1a_ 153 ------------------------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP 194 (259)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--
T ss_pred ------------------------------cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCH
Confidence 011369999999888776543 6899999999877554
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.44 E-value=0.00027 Score=74.62 Aligned_cols=195 Identities=17% Similarity=0.129 Sum_probs=123.5
Q ss_pred cCCC-cccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---Ccc
Q psy13944 5 RGKL-GHNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---DVN 75 (1217)
Q Consensus 5 ~g~~-g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---~VD 75 (1217)
.||. -+||+.+--|....++|.+...+.+ -+.+.+.. ....++..+.+|++++ ++.+.+++ .+|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-~~~~~~~~~~~Dv~~~------~~v~~~~~~~g~iD 76 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA-KECPGIEPVCVDLGDW------DATEKALGGIGPVD 76 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHSTTCEEEECCTTCH------HHHHHHHTTCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhcCCCeEEEEeCCCH------HHHHHHHHHcCCCe
Confidence 3553 4889998899999999987433211 12221111 1234688999999998 77776665 579
Q ss_pred EEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh-c---CCCCeEEEEcCcccccccccccccccCCCCChH
Q psy13944 76 IVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHI 144 (1217)
Q Consensus 76 iViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~-~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~ 144 (1217)
++||+||.... .+.++..+++|+.|+..+.+.+.. + +.--++|.+||........
T Consensus 77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------------- 142 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-------------- 142 (242)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC--------------
Confidence 99999997532 123568899999999999886643 1 2334899999975432110
Q ss_pred HHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 145 EMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 145 ~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+..+. ....
T Consensus 143 ------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~-------~~~~ 191 (242)
T d1cyda_ 143 ------------------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK-------VSAD 191 (242)
T ss_dssp ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH-------HTCC
T ss_pred ------------------------ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHh-------hcCC
Confidence 01369999999998887654 67889999998775442111 1111
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......+.... + ..-+...+|++++++.++..
T Consensus 192 ~~~~~~~~~~~----p-----l~R~~~peeva~~v~fL~S~ 223 (242)
T d1cyda_ 192 PEFARKLKERH----P-----LRKFAEVEDVVNSILFLLSD 223 (242)
T ss_dssp HHHHHHHHHHS----T-----TSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCc
Confidence 11222221110 1 11256689999998877654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.43 E-value=7.1e-05 Score=76.30 Aligned_cols=74 Identities=9% Similarity=0.114 Sum_probs=56.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchh----------------cHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDE----------------HFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~----------------~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.+++++.+|+++. +++.++++++|+|||+||...... .......+|+.|+.++++.+.
T Consensus 47 ~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (252)
T d2q46a1 47 GEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 120 (252)
T ss_dssp CCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHH
T ss_pred CCcEEEEeeeccc------cccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccc
Confidence 5678999999885 467888899999999998643211 122456789999999999999
Q ss_pred hcCCCcEEEEEccceee
Q psy13944 613 EMKNLDSFIYVSTAYSN 629 (1217)
Q Consensus 613 ~~~~lk~fV~vSTa~v~ 629 (1217)
.. ..+.+.+.|+..++
T Consensus 121 ~~-~~~~~~~~s~~~~~ 136 (252)
T d2q46a1 121 VA-GVKHIVVVGSMGGT 136 (252)
T ss_dssp HH-TCSEEEEEEETTTT
T ss_pred cc-cccccccccccccC
Confidence 87 67788888876543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.42 E-value=0.0005 Score=72.61 Aligned_cols=193 Identities=18% Similarity=0.194 Sum_probs=125.0
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
.|| +-+||+.+.-|....++|.+...+.+ .+.+.++ ..++..+.+|++++ ++.+.+++
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~----~~~~~~~~~Dv~d~------~~v~~~~~~~g 75 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCVDLGDW------EATERALGSVG 75 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----STTCEEEECCTTCH------HHHHHHHTTCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHh----cCCCeEEEEeCCCH------HHHHHHHHHhC
Confidence 455 34889999999999999988433211 2222222 34688999999998 77776665
Q ss_pred CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh-c---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~-~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+|+.... .+.++..+++|+.|+..+.+.+.+ + ..--++|++||....... |
T Consensus 76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----------~- 144 (244)
T d1pr9a_ 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV----------T- 144 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------T-
T ss_pred CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc----------c-
Confidence 57999999998532 134568899999999988887643 2 234589999997653211 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
....|+.||+.-+.+.+..+ .++.+..+.|+.|-.+..+.. .
T Consensus 145 ---------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~------~ 191 (244)
T d1pr9a_ 145 ---------------------------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT------W 191 (244)
T ss_dssp ---------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT------S
T ss_pred ---------------------------chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh------c
Confidence 01369999999988876654 688999999988765422110 0
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.. ......+.... + ..-+...+|+|++++.++...
T Consensus 192 ~~-~~~~~~~~~~~----p-----l~R~~~peevA~~v~fL~S~~ 226 (244)
T d1pr9a_ 192 SD-PHKAKTMLNRI----P-----LGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp CS-HHHHHHHHTTC----T-----TCSCBCHHHHHHHHHHHHSGG
T ss_pred cC-hHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCch
Confidence 01 11122222211 1 112567899999988776543
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.40 E-value=0.00036 Score=74.61 Aligned_cols=200 Identities=15% Similarity=0.109 Sum_probs=124.9
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
.|| +=+||+.+.-|....++|.+...+.+ .+.+.++. ....++.++.+|++++ ++++.+++
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l-~~~~~~~~~~~Dv~~~------~~v~~~~~~~~ 77 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI-GSPDVISFVHCDVTKD------EDVRNLVDTTI 77 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CCTTTEEEEECCTTCH------HHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCCceEEEEccCCCH------HHHHHHHHHHH
Confidence 355 33788888889999999987433211 11222221 1235688899999998 77776653
Q ss_pred ----CccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccc
Q psy13944 73 ----DVNIVFHVAATVK-----FD----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 73 ----~VDiViH~AA~v~-----f~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
.+|++||+||... +. +.++..+++|+.|+..+.+.+.+ | .+--++|.+||.......
T Consensus 78 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~------- 150 (268)
T d2bgka1 78 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG------- 150 (268)
T ss_dssp HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-------
T ss_pred HHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc-------
Confidence 6799999999642 11 23557899999999998887643 2 233488999887543210
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
. .....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+......+
T Consensus 151 --~----------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~ 200 (268)
T d2bgka1 151 --E----------------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG 200 (268)
T ss_dssp --T----------------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS
T ss_pred --c----------------------------ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhc
Confidence 0 111369999999988876654 68999999999887764332221
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.. ....-....... ....-+...+|||++++.++...
T Consensus 201 ~~-----~~~~~~~~~~~~--------~~~gr~~~pedvA~~v~fL~S~~ 237 (268)
T d2bgka1 201 VD-----SSRVEELAHQAA--------NLKGTLLRAEDVADAVAYLAGDE 237 (268)
T ss_dssp CC-----HHHHHHHHHHTC--------SSCSCCCCHHHHHHHHHHHHSGG
T ss_pred CC-----HHHHHHHHHhcc--------ccCCCCcCHHHHHHHHHHHhChh
Confidence 11 011111111110 01112567899999998877543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.40 E-value=0.00012 Score=77.84 Aligned_cols=150 Identities=15% Similarity=0.076 Sum_probs=101.6
Q ss_pred ccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDV 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~V 74 (1217)
+||+.+--|....++|.+..-+ .-.+.+.++....-.++.++.+|++++ ++.+.++ ..+
T Consensus 6 ITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~i 79 (255)
T d1gega_ 6 VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR------DQVFAAVEQARKTLGGF 79 (255)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH------HHHHHHHHHHHHHTTCC
T ss_pred EcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH------HHHHHHHHHHHHHhCCc
Confidence 5777777888888888774321 111222222223345789999999998 7776654 468
Q ss_pred cEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh----cCCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE----MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~----~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|++||+||.... . +.++..+++|+.|+.++.+.+.. .+.-.++|++||....... |
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------~--- 146 (255)
T d1gega_ 80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN----------P--- 146 (255)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------T---
T ss_pred cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC----------c---
Confidence 999999997532 1 23568999999999998877643 2333578999987542210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
....|+.||+.-+.+.+..+ .|+.+..+-|+.|-.
T Consensus 147 -------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T 186 (255)
T d1gega_ 147 -------------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKT 186 (255)
T ss_dssp -------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred -------------------------ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccC
Confidence 01359999999888876654 678899999987643
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.37 E-value=0.0001 Score=78.57 Aligned_cols=152 Identities=14% Similarity=0.140 Sum_probs=105.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------CccE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DVNI 76 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~VDi 76 (1217)
=+||+.+--|....++|.+...+ .--+.+++...+.-.++..+.+|++++ ++++.+++ .+|+
T Consensus 9 lVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 9 LITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQ------ASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp EEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCE
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCH------HHHHHHHHHHHHHhCCccE
Confidence 37888888888999999884332 112333333333456789999999998 77776653 5799
Q ss_pred EEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh-c---CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 77 VFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 77 ViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~-~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+||.||.... .+.++..+++|+.|+..+.+.+.. + ..--++|++||....... |
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------~----- 147 (256)
T d1k2wa_ 83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE----------A----- 147 (256)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------T-----
T ss_pred EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc----------c-----
Confidence 9999997532 133568899999999998876432 2 233589999997653210 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+.-+.+.+..+ .|+.+..+-|+.|-.+
T Consensus 148 -----------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~ 188 (256)
T d1k2wa_ 148 -----------------------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGE 188 (256)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT
T ss_pred -----------------------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCch
Confidence 11369999999988876554 6788999999876654
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.36 E-value=0.00011 Score=78.37 Aligned_cols=154 Identities=16% Similarity=0.111 Sum_probs=105.3
Q ss_pred CCC-cccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-----
Q psy13944 6 GKL-GHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR----- 71 (1217)
Q Consensus 6 g~~-g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~----- 71 (1217)
||. -+||+..--|....++|.+..-+ .-.+.+.++....-.++..+.+|++++ ++++.++
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~------~~v~~~~~~~~~ 75 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV------PEIEALVAAVVE 75 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCH------HHHHHHHHHHHH
Confidence 453 47888888888888888873322 112222222233445789999999998 7776654
Q ss_pred --CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-----CCCCeEEEEcCccccccccccccccc
Q psy13944 72 --EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-----KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 72 --~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-----~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
..+|++||+||.... .+.++..+++|+.|+..+.+.+... .+--++|.+||.......
T Consensus 76 ~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~-------- 147 (257)
T d2rhca1 76 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-------- 147 (257)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC--------
T ss_pred HhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc--------
Confidence 357999999997532 1245689999999999999987542 123478999887553211
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
| ....|+.||+.-+.+.+..+ .++.+..+-|+.|-.
T Consensus 148 --~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T 188 (257)
T d2rhca1 148 --V----------------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVET 188 (257)
T ss_dssp --T----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCS
T ss_pred --c----------------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCC
Confidence 0 01369999999888876654 568888888887643
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.25 E-value=0.00012 Score=77.42 Aligned_cols=189 Identities=11% Similarity=0.138 Sum_probs=120.7
Q ss_pred ccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------ED 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~ 73 (1217)
+||+.+.-|....++|.+..-+ ...+.+.++....-.++.++.+|++++ ++.+.++ ..
T Consensus 6 ITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~ 79 (244)
T d1edoa_ 6 VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE------ADVEAMMKTAIDAWGT 79 (244)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSH------HHHHHHHHHHHHHSSC
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCH------HHHHHHHHHHHHHcCC
Confidence 5777777888888888773221 122333333333446788999999998 7776654 36
Q ss_pred ccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 74 VNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 74 VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
+|+++|+|+.... . +.++..+++|+.|+..+.+.+.. | .+--++|++||....... |
T Consensus 80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~----------~--- 146 (244)
T d1edoa_ 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN----------I--- 146 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T---
T ss_pred CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC----------C---
Confidence 8999999997532 1 34568999999999998887653 2 233589999997653210 0
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccch
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNG 218 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g 218 (1217)
....|+.||+.-+.+.+..+ .|+.+..+-|+.|-.+..+ .+.
T Consensus 147 -------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~-------~~~- 193 (244)
T d1edoa_ 147 -------------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA-------KLG- 193 (244)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH-------TTC-
T ss_pred -------------------------CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH-------Hhh-
Confidence 01369999999888876654 6889999999876433211 110
Q ss_pred hHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 219 LTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 219 ~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
......+... .+ ..-+.-.+|+++++..++..
T Consensus 194 -~~~~~~~~~~----~p-----l~R~~~p~dvA~~v~fLa~S 225 (244)
T d1edoa_ 194 -EDMEKKILGT----IP-----LGRTGQPENVAGLVEFLALS 225 (244)
T ss_dssp -HHHHHHHHTS----CT-----TCSCBCHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHHCC
Confidence 1122222211 11 11256679999998877643
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00018 Score=76.61 Aligned_cols=195 Identities=17% Similarity=0.167 Sum_probs=123.6
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc----
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR---- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---- 71 (1217)
.|| +=+||+.+.-|....++|.+...+ .-.+.+.++....-.++.++.+|++++ ++.+.++
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~------~~~~~~~~~~~ 83 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE------QELSALADFAI 83 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCH------HHHHHHHHHHH
Confidence 355 338899988999999998873322 112223233233345789999999998 7766654
Q ss_pred ---CCccEEEEcCccCC---cc---cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCC
Q psy13944 72 ---EDVNIVFHVAATVK---FD---EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 72 ---~~VDiViH~AA~v~---f~---e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
..+|+++|+||... ++ +.++..+++|+.|+..+.+.+.. + .+-.++|.+||.......
T Consensus 84 ~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~---------- 153 (255)
T d1fmca_ 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN---------- 153 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------
T ss_pred HHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc----------
Confidence 46899999999753 22 23558899999999998876643 2 123478999997653211
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
| ....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+... .
T Consensus 154 ~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~------~ 199 (255)
T d1fmca_ 154 I----------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK------S 199 (255)
T ss_dssp T----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH------T
T ss_pred c----------------------------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh------c
Confidence 0 11369999999888876654 6789999999877543211 1
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
... ......+.... + ..-+...+|+|++++.++..
T Consensus 200 -~~~-~e~~~~~~~~~----p-----l~R~g~pedvA~~v~fL~S~ 234 (255)
T d1fmca_ 200 -VIT-PEIEQKMLQHT----P-----IRRLGQPQDIANAALFLCSP 234 (255)
T ss_dssp -TCC-HHHHHHHHHTC----S-----SCSCBCHHHHHHHHHHHHSG
T ss_pred -cCC-HHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCc
Confidence 111 12222222221 1 11245679999998887754
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=97.21 E-value=0.00049 Score=73.95 Aligned_cols=157 Identities=17% Similarity=0.158 Sum_probs=105.4
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcCh-----hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFADD-----AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~~-----vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
|| +=+||+.+.-|....++|.+..-+. --+.+.+...+.-.++..+.+|++++ ++.+.++ .
T Consensus 5 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g 78 (276)
T d1bdba_ 5 GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSL------EDQKQAASRCVARFG 78 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccH------HHHHHHHHHHHHHhC
Confidence 44 3478888888999999998843321 12333322223446789999999998 7776654 3
Q ss_pred CccEEEEcCccCCc--------cc----CHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 DVNIVFHVAATVKF--------DE----HFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 ~VDiViH~AA~v~f--------~e----~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|+++|+|+...+ .+ .++..+++|+.|+..+.+.+... ++--++|++||....-.
T Consensus 79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~---------- 148 (276)
T d1bdba_ 79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYP---------- 148 (276)
T ss_dssp CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTST----------
T ss_pred CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccC----------
Confidence 68999999996432 11 25688999999999888776431 11147888888643211
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEecceeccCCC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM----DKLPLGIVRPSIVMPVVE 206 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~----~gLPvvIvRPsiV~G~~~ 206 (1217)
.| ....|+.||+.-+.+.+..+ +++.+..+.|+.|-.+..
T Consensus 149 ~~----------------------------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~ 192 (276)
T d1bdba_ 149 NG----------------------------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLR 192 (276)
T ss_dssp TS----------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCC
T ss_pred CC----------------------------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcC
Confidence 11 01259999998888776544 668899999998865543
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.20 E-value=0.00044 Score=72.89 Aligned_cols=191 Identities=13% Similarity=0.074 Sum_probs=122.5
Q ss_pred cccCCCCCCcccHHHHHHHHhcC-----hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCccE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD-----DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVNI 76 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~-----~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VDi 76 (1217)
=+||+.+.-|....++|.+..-. +--+.+.+...+...++.++.+|++++ ++.+.++ .++|+
T Consensus 9 lItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~------~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 9 LVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDP------KAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH------HHHHHHHHHHHHHHSCCCE
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCH------HHHHHHHHHHHHHhCCccE
Confidence 37888888899999999873221 112333333334556889999999998 7776654 35899
Q ss_pred EEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHHHH
Q psy13944 77 VFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQ 148 (1217)
Q Consensus 77 ViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~ 148 (1217)
+||+|+.... .+.++..+++|+.++..+.+++... .+-..++.+||.+.... |.
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~--------------~~---- 144 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA--------------FG---- 144 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH--------------HH----
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc--------------cC----
Confidence 9999987522 1235588999999999999887543 34345555555433111 00
Q ss_pred HhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHH
Q psy13944 149 IINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMY 223 (1217)
Q Consensus 149 ~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li 223 (1217)
...|+.+|+.-|.+.+..+ .++.+..+-|+.|=.+.. .++. ....
T Consensus 145 ---------------------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~-------~~~~--~~~~ 194 (241)
T d2a4ka1 145 ---------------------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT-------AGLP--PWAW 194 (241)
T ss_dssp ---------------------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG-------TTSC--HHHH
T ss_pred ---------------------ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH-------Hhhh--HhHH
Confidence 0259999999998887654 679999999998744322 1111 1222
Q ss_pred HHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 224 VAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 224 ~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
....+.. ...-+...|||+++++.++....
T Consensus 195 ~~~~~~~---------p~~r~~~p~dva~~v~fL~S~~s 224 (241)
T d2a4ka1 195 EQEVGAS---------PLGRAGRPEEVAQAALFLLSEES 224 (241)
T ss_dssp HHHHHTS---------TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhCC---------CCCCCcCHHHHHHHHHHHhcchh
Confidence 2222211 11125578999999988875433
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.0014 Score=69.38 Aligned_cols=156 Identities=12% Similarity=0.068 Sum_probs=102.7
Q ss_pred cCCC-cccCCCCCCcccHHHHHHHHhcC-----------hhHHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHh
Q psy13944 5 RGKL-GHNGAKTCKHNSILWVAKDFFAD-----------DAFDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVL 70 (1217)
Q Consensus 5 ~g~~-g~tg~r~kkg~~~~eRL~~~l~~-----------~vfd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L 70 (1217)
.||. =+||+..--|....++|.+...+ .-.+.+.++... ...++.++.+|++++ ++.+.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~------~~v~~l 78 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE------AGVQRL 78 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH------HHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCH------HHHHHH
Confidence 3442 37888888888888888653221 111222221111 134789999999998 777666
Q ss_pred cC-----------CccEEEEcCccCC------cc----cCHHHHHHHHHHHHHHHHHHhHhc-CC----CCeEEEEcCcc
Q psy13944 71 RE-----------DVNIVFHVAATVK------FD----EHFQTAFEINCKGTEKLLKMAEEM-KN----LDSFIYVSTAY 124 (1217)
Q Consensus 71 ~~-----------~VDiViH~AA~v~------f~----e~l~~a~~vNV~GT~~LLelAk~~-~~----lk~fV~vSTa~ 124 (1217)
++ .+|+++|.||... +. +.++..+++|+.|+..+.+.+... .. -.++|++||..
T Consensus 79 ~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~ 158 (259)
T d1oaaa_ 79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC 158 (259)
T ss_dssp HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred HHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccc
Confidence 42 3579999998642 11 235578999999999999988642 22 23789999975
Q ss_pred cccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEeccee
Q psy13944 125 SNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM---DKLPLGIVRPSIV 201 (1217)
Q Consensus 125 v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~---~gLPvvIvRPsiV 201 (1217)
.... .| ....|+.||+..+.+.+..+ +++.+..+.|+.|
T Consensus 159 ~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i 200 (259)
T d1oaaa_ 159 ALQP----------YK----------------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPL 200 (259)
T ss_dssp GTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSB
T ss_pred ccCC----------Cc----------------------------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCC
Confidence 4221 00 01369999999998887765 7888888888876
Q ss_pred ccC
Q psy13944 202 MPV 204 (1217)
Q Consensus 202 ~G~ 204 (1217)
-.+
T Consensus 201 ~T~ 203 (259)
T d1oaaa_ 201 DND 203 (259)
T ss_dssp SSH
T ss_pred CCH
Confidence 544
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.00031 Score=74.35 Aligned_cols=156 Identities=15% Similarity=0.122 Sum_probs=105.4
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcCh-----h---HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc----
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFADD-----A---FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR---- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~~-----v---fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~---- 71 (1217)
.|+ .=+||+.+.-|.....+|.+...+- - .+.+.++......++..+.+|++++ ++++.++
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~------~~v~~~~~~i~ 79 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR------EDIYSSAKKVK 79 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH------HHHHHHHHHHH
Confidence 455 3388999999999999998743321 1 1222233334456899999999998 6766544
Q ss_pred ---CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccC
Q psy13944 72 ---EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 72 ---~~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
..+|++||+|+..... +.++..+++|+.|+.++.+.+.. | .+--++|++||........
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~-------- 151 (244)
T d1yb1a_ 80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP-------- 151 (244)
T ss_dssp HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH--------
T ss_pred HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCC--------
Confidence 4689999999986332 23558899999999998876643 2 2335899999976532100
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc--------CCCCEEEEecceeccC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--------DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--------~gLPvvIvRPsiV~G~ 204 (1217)
. -..|+.||+.-+.+.+..+ .|+.+..+.|+.|--+
T Consensus 152 -----~-------------------------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 152 -----F-------------------------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp -----H-------------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred -----C-------------------------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 0 0259999998777665543 4688889999876443
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.14 E-value=0.00041 Score=74.98 Aligned_cols=151 Identities=15% Similarity=0.131 Sum_probs=100.6
Q ss_pred ccCCCCCCcccHHHHHHHHhcC--hh---------HHHhh---hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC---
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD--DA---------FDRLR---KENANFTERIVVLTADLQSDGLGLDEKEKKVLRE--- 72 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~--~v---------fd~Lr---~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~--- 72 (1217)
+||+.+.-|....++|.+...+ .+ -+.+. ++......++..+.+|++++ ++.+.+++
T Consensus 7 ITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~------~~~~~~~~~~~ 80 (285)
T d1jtva_ 7 ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS------KSVAAARERVT 80 (285)
T ss_dssp ESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH------HHHHHHHHTCT
T ss_pred EccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccch------Hhhhhhhhhcc
Confidence 5777777788888887653221 00 11111 11223346899999999998 77766543
Q ss_pred --CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 73 --DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 --~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
.+|+++|.|+.... . +.++..+++|+.|+.++.+++.. | .+--++|++||...... .|
T Consensus 81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~----------~~ 150 (285)
T d1jtva_ 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG----------LP 150 (285)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC----------CT
T ss_pred ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC----------CC
Confidence 47999999987532 1 23557899999999998887643 2 23358999999755221 11
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||+.-+.+.+..+ .|+.+..+.|+.|--+
T Consensus 151 ----------------------------~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~ 191 (285)
T d1jtva_ 151 ----------------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (285)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence 11369999998887765543 6899999999987543
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.14 E-value=0.00036 Score=74.37 Aligned_cols=155 Identities=15% Similarity=0.136 Sum_probs=106.7
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-----
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR----- 71 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~----- 71 (1217)
|| .=+||+.+.-|....++|.+...+ .-.+.+.++....-.++..+.+|++++ ++++.++
T Consensus 5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~------~~v~~~~~~~~~ 78 (260)
T d1zema1 5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE------EAVIGTVDSVVR 78 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCH------HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHH
Confidence 44 237888888889999998874332 112233333333445789999999998 7766655
Q ss_pred --CCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccC
Q psy13944 72 --EDVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 72 --~~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
..+|++||.||... +. +.++..+++|+.|+..+.+.+.. | .+--++|++||.......
T Consensus 79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~--------- 149 (260)
T d1zema1 79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--------- 149 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC---------
T ss_pred HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC---------
Confidence 35899999999642 22 23558899999999998887643 2 233489999997653210
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
| .-..|+.||+.-+.+.+..+ .++.+..+-|+.|-.+
T Consensus 150 -~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 150 -P----------------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp -T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -c----------------------------chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 0 00259999999888876654 6788999999877654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.12 E-value=0.00032 Score=74.79 Aligned_cols=155 Identities=17% Similarity=0.203 Sum_probs=105.5
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-----
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR----- 71 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~----- 71 (1217)
|| +=+||+.+--|....++|.+..-+ .-.+.+.++....-.++..+.+|++++ ++.+.++
T Consensus 8 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~------~~v~~~~~~~~~ 81 (259)
T d2ae2a_ 8 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR------SERQELMNTVAN 81 (259)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH------HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCH------HHHHHHHHHHHH
Confidence 55 348899888899999999884322 111222222233345788899999998 6665443
Q ss_pred --C-CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccC
Q psy13944 72 --E-DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 72 --~-~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
. .+|+++|+|+.... .+.++..+++|+.|+..+.+++... .+--++|++||......
T Consensus 82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~---------- 151 (259)
T d2ae2a_ 82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA---------- 151 (259)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC----------
T ss_pred HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc----------
Confidence 2 48999999997532 1235689999999999988876542 23358999999765221
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.| ....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+
T Consensus 152 ~~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 194 (259)
T d2ae2a_ 152 VP----------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 194 (259)
T ss_dssp CT----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred cc----------------------------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCH
Confidence 00 11369999998888776554 5788888999877543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.0011 Score=71.95 Aligned_cols=150 Identities=13% Similarity=0.193 Sum_probs=103.6
Q ss_pred ccCCCCCCcccHHHHHHHHhcC------------hhHHHhhhcCc-ccCCCeEEEEccCCCCCCCCCHHHHHHhc-----
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD------------DAFDRLRKENA-NFTERIVVLTADLQSDGLGLDEKEKKVLR----- 71 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~------------~vfd~Lr~~~p-~~~~kI~~V~GDl~d~~LGLs~edl~~L~----- 71 (1217)
+||+.+.-|....++|.+...+ ...+.++...+ ....++..+.+|++++ ++.+.++
T Consensus 17 ITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~------~~v~~~~~~~~~ 90 (297)
T d1yxma1 17 VTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE------EEVNNLVKSTLD 90 (297)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH------HHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCH------HHHHHHHHHHHH
Confidence 8999998999999999874322 11223333222 2345799999999998 7776654
Q ss_pred --CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCC
Q psy13944 72 --EDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 72 --~~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
..+|++||+|+.... . +.++..+++|+.|+..+.+.+... .+-.++|.+|++...+.
T Consensus 91 ~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~----------- 159 (297)
T d1yxma1 91 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF----------- 159 (297)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-----------
T ss_pred HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-----------
Confidence 368999999987532 1 345688999999999988877532 22346777776533111
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
+....|+.||+.-+.+.+..+ .++.+..+.|+.|..+
T Consensus 160 ----------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 201 (297)
T d1yxma1 160 ----------------------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 201 (297)
T ss_dssp ----------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred ----------------------------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCc
Confidence 011369999998888776654 6789999999988665
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.10 E-value=0.00011 Score=78.10 Aligned_cols=154 Identities=18% Similarity=0.150 Sum_probs=101.6
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhc-------CCcc
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFADDAFDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLR-------EDVN 75 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~VD 75 (1217)
|| +-+||+..--|....++|.+..-..+.-..+++..+ ...+...+.+|++++ ++.+.++ ..+|
T Consensus 5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iD 78 (248)
T d2d1ya1 5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDE------RERVRFVEEAAYALGRVD 78 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCH------HHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCH------HHHHHHHHHHHHhcCCCC
Confidence 44 337888888899999999874332111000000000 011346789999998 7766655 3579
Q ss_pred EEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 76 IVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 76 iViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
++||.||.... . +.++..+++|+.|+.++.+++.. | .+--++|++||....... |
T Consensus 79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~----------~----- 143 (248)
T d2d1ya1 79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------Q----- 143 (248)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------T-----
T ss_pred eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc----------c-----
Confidence 99999997532 1 23567899999999999888753 2 233589999997653211 0
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
....|+.||+..+.+.+..+ .++.+..+-|+.|-.
T Consensus 144 -----------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T 183 (248)
T d2d1ya1 144 -----------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIAT 183 (248)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred -----------------------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCC
Confidence 01369999999888876543 678888899986643
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.07 E-value=0.00042 Score=73.64 Aligned_cols=156 Identities=17% Similarity=0.128 Sum_probs=105.3
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
.|| +=+||+.+.-|....++|.+...+.+ -+.+.+...+...+..++.+|++++ ++.+.++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~ 78 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSE------ADWTLVMAAVQRRL 78 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCH------HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCH------HHHHHHHHHHHHHh
Confidence 355 33889888899999999988433211 1222222233456788999999997 7776655
Q ss_pred CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-cC-CCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 72 EDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-MK-NLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~~-~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
..+|++||+|+.... . +.++..+++|+.|+..+.+.+.. |+ +--++|++||...... .|
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~----------~~-- 146 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP----------IE-- 146 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC----------CT--
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC----------cc--
Confidence 357999999997532 1 23568999999999988877643 21 2258999999765221 00
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccC
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~ 204 (1217)
.-..|+.||+..+.+.+..+ .++.+..+-|+.|-.+
T Consensus 147 --------------------------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~ 189 (253)
T d1hxha_ 147 --------------------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp --------------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred --------------------------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence 01369999998888776443 2477788999877543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=97.04 E-value=0.00029 Score=74.35 Aligned_cols=90 Identities=7% Similarity=0.123 Sum_probs=58.9
Q ss_pred cccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccch
Q psy13944 511 RSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFD 590 (1217)
Q Consensus 511 ~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~ 590 (1217)
.|.+++++.|+........+. .....+. ...++++.+|+.+.. .......+++.|+|+++..
T Consensus 26 ~G~~V~~l~R~~~~~~~~~~~---~~~~~~~------~~~~~~~~~d~~~~~------~~~~~~~~~~~vi~~~~~~--- 87 (307)
T d1qyca_ 26 LGHPTFLLVRESTASSNSEKA---QLLESFK------ASGANIVHGSIDDHA------SLVEAVKNVDVVISTVGSL--- 87 (307)
T ss_dssp TTCCEEEECCCCCTTTTHHHH---HHHHHHH------TTTCEEECCCTTCHH------HHHHHHHTCSEEEECCCGG---
T ss_pred CCCeEEEEECCCccccchhHH---HHHHhhc------cCCcEEEEeecccch------hhhhhhhhceeeeeccccc---
Confidence 477888888765433222111 1111111 245889999998853 5666778899999999864
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcccee
Q psy13944 591 EHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYS 628 (1217)
Q Consensus 591 ~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~v 628 (1217)
++.++.+++++++.. +.+.+++.||...
T Consensus 88 ---------~~~~~~~~~~a~~~~-~~~~~~~~s~~~~ 115 (307)
T d1qyca_ 88 ---------QIESQVNIIKAIKEV-GTVKRFFPSEFGN 115 (307)
T ss_dssp ---------GSGGGHHHHHHHHHH-CCCSEEECSCCSS
T ss_pred ---------ccchhhHHHHHHHHh-ccccceeeecccc
Confidence 344666788888887 6777888887543
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.03 E-value=0.00094 Score=71.02 Aligned_cols=151 Identities=11% Similarity=0.096 Sum_probs=103.3
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCc--ccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENA--NFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p--~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
+||+..--|....++|.+..-+. -.+.+.++.. ....++..+.+|++++ ++.+.++ .
T Consensus 9 ITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~------~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 9 ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE------AQVEAYVTATTERFG 82 (258)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH------HHHHHHHHHHHHHHS
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCH------HHHHHHHHHHHHHhC
Confidence 78888888888898888743221 1111111111 1234788999999998 7777665 4
Q ss_pred CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||.||... +. +.++..+++|+.|+..+.+.+.. + .+--++|++||....... |
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------~- 151 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI----------G- 151 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------S-
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC----------C-
Confidence 6899999999642 32 23558999999999999887643 1 233589999997653210 0
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..+.+.+..+ .++.+..+-|+.|-.+
T Consensus 152 ---------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~ 192 (258)
T d1iy8a_ 152 ---------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 192 (258)
T ss_dssp ---------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCH
Confidence 01369999999888776553 6899999999877543
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.00047 Score=73.15 Aligned_cols=150 Identities=19% Similarity=0.209 Sum_probs=104.4
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC----
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE---- 72 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~---- 72 (1217)
|| +-+||+.+--|....++|.+...+ .-.+.+.++ ..++.++.+|++++ ++.+.+++
T Consensus 6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~----~~~~~~~~~Dvs~~------~~v~~~~~~~~~ 75 (250)
T d1ydea1 6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE----LPGAVFILCDVTQE------DDVKTLVSETIR 75 (250)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----CTTEEEEECCTTSH------HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----cCCCeEEEccCCCH------HHHHHHHHHHHH
Confidence 55 348899888999999999884322 112222222 34688999999998 77776653
Q ss_pred ---CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 ---DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ---~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
.+|++||.|+... +. +.++..+++|+.|+..+.+++... ++--++|.+||...... .
T Consensus 76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~----------~ 145 (250)
T d1ydea1 76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG----------Q 145 (250)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC----------C
T ss_pred hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc----------c
Confidence 5799999999642 22 225688999999999988877532 11148999999765321 0
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
| ....|+.||+.-+.+.+..+ .++.+..+.|+.|-.
T Consensus 146 ~----------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T 186 (250)
T d1ydea1 146 A----------------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWT 186 (250)
T ss_dssp T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCC
T ss_pred c----------------------------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCC
Confidence 0 11369999998888776543 689999999987743
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=96.94 E-value=0.00048 Score=73.32 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=106.1
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
|| +=+||+.+--|....++|.+..-+ ...+.+.++. ...-.++.++.+|++++ ++++.+++
T Consensus 4 gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~------~~v~~~~~~~ 77 (260)
T d1x1ta1 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG------EAVRGLVDNA 77 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSH------HHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCH------HHHHHHHHHH
Confidence 45 247899888899999999873221 1122222221 12345789999999998 77776653
Q ss_pred -----CccEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCccccccccccccccc
Q psy13944 73 -----DVNIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFY 137 (1217)
Q Consensus 73 -----~VDiViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y 137 (1217)
.+|++||.||... +. +.++..+++|+.|+..+.+.+... .+--++|++||......
T Consensus 78 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~--------- 148 (260)
T d1x1ta1 78 VRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA--------- 148 (260)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------
T ss_pred HHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec---------
Confidence 5799999999753 22 345689999999999887776432 23348999999765321
Q ss_pred CCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 138 EPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 138 ~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.| ....|+.||+.-+.+.+..+ .++.+..+.|+.|-.+
T Consensus 149 -~~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 191 (260)
T d1x1ta1 149 -SA----------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp -CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred -cC----------------------------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCCh
Confidence 00 01369999998888776653 6788999999987654
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.94 E-value=0.0022 Score=67.59 Aligned_cols=197 Identities=19% Similarity=0.145 Sum_probs=118.7
Q ss_pred cCC-CcccCCCCC--CcccHHHHHHHHhcCh--------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc--
Q psy13944 5 RGK-LGHNGAKTC--KHNSILWVAKDFFADD--------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~k--kg~~~~eRL~~~l~~~--------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-- 71 (1217)
.|| +-+||+.+. -|....++|.+...+. .-+... +......+..++.+|++++ ++.+.++
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~------~~v~~~~~~ 79 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEALGGALLFRADVTQD------EELDALFAG 79 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHTTCCEEEECCTTCH------HHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-HhhhccCcccccccccCCH------HHHHHHHHH
Confidence 355 347888764 4688999998743321 111111 1112234678899999998 7777665
Q ss_pred -----CCccEEEEcCccCC-------ccc----CHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccc
Q psy13944 72 -----EDVNIVFHVAATVK-------FDE----HFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEE 134 (1217)
Q Consensus 72 -----~~VDiViH~AA~v~-------f~e----~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E 134 (1217)
..+|+++|+|+... +.+ .+...+++|+.++..+.+.+..+ .+-.++|++||.......
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~----- 154 (256)
T d1ulua_ 80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV----- 154 (256)
T ss_dssp HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC-----
T ss_pred HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC-----
Confidence 35899999998632 212 24468899999999999887542 222478999987653210
Q ss_pred cccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCC
Q psy13944 135 KFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPC 209 (1217)
Q Consensus 135 ~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~ 209 (1217)
+....|+.||+.-+.+.+..+ .|+.+..+.|+.|..+.....
T Consensus 155 ---------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~ 201 (256)
T d1ulua_ 155 ---------------------------------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI 201 (256)
T ss_dssp ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred ---------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch
Confidence 011369999999998876654 689999999998766543221
Q ss_pred cccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 210 PMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 210 pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
+. .......+.... + ..-+...+|++++++.++....
T Consensus 202 ~~-------~~~~~~~~~~~~----p-----l~R~~~pedvA~~v~fL~S~~s 238 (256)
T d1ulua_ 202 PG-------FTKMYDRVAQTA----P-----LRRNITQEEVGNLGLFLLSPLA 238 (256)
T ss_dssp ---------CHHHHHHHHHHS----T-----TSSCCCHHHHHHHHHHHHSGGG
T ss_pred hh-------hHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCchh
Confidence 11 112222222110 1 0114567999999887775433
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.93 E-value=0.00084 Score=71.51 Aligned_cols=156 Identities=15% Similarity=0.165 Sum_probs=100.3
Q ss_pred CCC-cccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCc---ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-
Q psy13944 6 GKL-GHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENA---NFTERIVVLTADLQSDGLGLDEKEKKVLRE- 72 (1217)
Q Consensus 6 g~~-g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~- 72 (1217)
||. =+||+.+.-|....++|.+...+. -.+.+.++.. ....++.++.+|++++ ++.+.+++
T Consensus 5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~------~~v~~~~~~ 78 (264)
T d1spxa_ 5 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD------AGQDEILST 78 (264)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH------HHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCH------HHHHHHHHH
Confidence 452 378988889999999998743221 1122222111 1234689999999998 77776653
Q ss_pred ------CccEEEEcCccCC---c----c----cCHHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCccccccccccc
Q psy13944 73 ------DVNIVFHVAATVK---F----D----EHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYSNCNIKKIE 133 (1217)
Q Consensus 73 ------~VDiViH~AA~v~---f----~----e~l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v~g~~~~I~ 133 (1217)
.+|++||+||... + . +.++..+++|+.|+..+.+.+... ++-..+|.++|....-.
T Consensus 79 ~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~----- 153 (264)
T d1spxa_ 79 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH----- 153 (264)
T ss_dssp HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS-----
T ss_pred HHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc-----
Confidence 5899999998641 1 1 235578999999999888877542 12236666666432100
Q ss_pred ccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 134 EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 134 E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
+.| .-..|+.||+.-+.+.+..+ .|+.+..+-|+.|-.+
T Consensus 154 ----~~~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~ 197 (264)
T d1spxa_ 154 ----ATP----------------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG 197 (264)
T ss_dssp ----CCT----------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred ----cCC----------------------------CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 010 01259999999888776543 6899999999988654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.92 E-value=0.0027 Score=67.23 Aligned_cols=153 Identities=15% Similarity=0.058 Sum_probs=102.7
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcCh-hH----------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh---
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFADD-AF----------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL--- 70 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~~-vf----------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L--- 70 (1217)
|| .=+||+.+--|....+.|.+...+. +. ..++.. ....++.++..|++.+. ++++.+
T Consensus 5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~-----~~~~~~~~~ 77 (254)
T d1sbya1 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAI--NPKVNITFHTYDVTVPV-----AESKKLLKK 77 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHH--CTTSEEEEEECCTTSCH-----HHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhh--CCCCCEEEEEeecCCCH-----HHHHHHHHH
Confidence 44 3378888878888888887744321 11 111111 12347889999998541 334332
Q ss_pred ----cCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHh-cC-----CCCeEEEEcCcccccccccccccccCCC
Q psy13944 71 ----REDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEE-MK-----NLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 71 ----~~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~-~~-----~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
...+|++||+||... .+.++..+++|+.|+.++.+++.. |. .-.++|++||...... .|
T Consensus 78 ~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~----------~~ 146 (254)
T d1sbya1 78 IFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA----------IH 146 (254)
T ss_dssp HHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----------CT
T ss_pred HHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC----------CC
Confidence 246899999999765 677899999999999998887654 21 2346999999765321 00
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
. -..|+.||+.-..+.+..+ .++.+..+-|+.|..+
T Consensus 147 ---------------------------~-~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 147 ---------------------------Q-VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp ---------------------------T-SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred ---------------------------C-CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 0 1359999998887776554 5789999999988754
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.88 E-value=0.0011 Score=70.27 Aligned_cols=150 Identities=17% Similarity=0.138 Sum_probs=102.2
Q ss_pred ccCCCCCCcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC-------Cc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------DV 74 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------~V 74 (1217)
+||+.+.-|....++|.+...+ ...+.+.++. ....++.++.+|++++ ++.+.+++ .+
T Consensus 11 VTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 11 ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV-GTPDQIQFFQHDSSDE------DGWTKLFDATEKAFGPV 83 (251)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CCTTTEEEEECCTTCH------HHHHHHHHHHHHHHSSC
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCCcEEEEEccCCCH------HHHHHHHHHHHHHhCCc
Confidence 8898888899999999884332 1122222222 1245789999999998 77666553 57
Q ss_pred cEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHhHh-cC--CC-CeEEEEcCcccccccccccccccCCCCCh
Q psy13944 75 NIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAEE-MK--NL-DSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 75 DiViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLelAk~-~~--~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
|++||+|+... +. +.++..+++|+.|+..+.+.+.. |. +- .++|++||...... .|
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~----------~~--- 150 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG----------DP--- 150 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC----------CT---
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc----------CC---
Confidence 99999999853 21 23557899999999999887643 22 22 37899999754211 00
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHh------c-CCCCEEEEecceeccC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREK------M-DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~------~-~gLPvvIvRPsiV~G~ 204 (1217)
....|+.||+..+.+.+.. . .++.+..+-|+.|-.+
T Consensus 151 -------------------------~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~ 193 (251)
T d1zk4a1 151 -------------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP 193 (251)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred -------------------------CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCCh
Confidence 0136999999988776532 2 5788888999877544
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=0.00094 Score=70.74 Aligned_cols=153 Identities=14% Similarity=0.091 Sum_probs=103.6
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhc---
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLR--- 71 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~--- 71 (1217)
|| +=+||+.+.-|....++|.+...+. -.+.+.++..+ ...++.++.+|++++ ++++.++
T Consensus 3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~ 76 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ------QQLRDTFRKV 76 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH------HHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCH------HHHHHHHHHH
Confidence 55 3478888888999999998743221 11111111111 134788999999998 7776655
Q ss_pred ----CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHhHh-cC-----CCCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 ----EDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEE-MK-----NLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 ----~~VDiViH~AA~v~f~e~l~~a~~vNV~GT~~LLelAk~-~~-----~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
..+|++||.|+... .++++..+++|+.|+.++..++.. +. .--++|.+||....-. .|
T Consensus 77 ~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~----------~~- 144 (254)
T d2gdza1 77 VDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP----------VA- 144 (254)
T ss_dssp HHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----------CT-
T ss_pred HHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC----------CC-
Confidence 36899999999864 567888999999998888777643 21 1135999999765221 10
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHH------Hhc-CCCCEEEEecceecc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVR------EKM-DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~------~~~-~gLPvvIvRPsiV~G 203 (1217)
....|+.||+.-+.+.+ ++. .++.+..+.|+.|-.
T Consensus 145 ---------------------------~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T 186 (254)
T d2gdza1 145 ---------------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT 186 (254)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSS
T ss_pred ---------------------------CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCC
Confidence 01359999998887764 233 678999999987744
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.68 E-value=0.0022 Score=68.33 Aligned_cols=152 Identities=16% Similarity=0.179 Sum_probs=105.5
Q ss_pred ccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------ED 73 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~ 73 (1217)
+||+.+.-|....++|.+...+ ...+.+.++....-.++.++.+|++++ +++..++ ..
T Consensus 23 ITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 23 VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV------EDIVRMFEEAVKIFGK 96 (272)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH------HHHHHHHHHHHHHHSC
T ss_pred EeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCH------HHHHHHHHHHHHHhCC
Confidence 8899888899999999874221 222233333333446789999999998 7776654 35
Q ss_pred ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCCChHH
Q psy13944 74 VNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIE 145 (1217)
Q Consensus 74 VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~ 145 (1217)
+|+++|.|+..... +.++..+++|+.|+..+++++.. |..-.+.+.++|...... +.
T Consensus 97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~---------~~------ 161 (272)
T d1g0oa_ 97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK---------AV------ 161 (272)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS---------SC------
T ss_pred CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc---------cc------
Confidence 79999999975321 23557899999999999988864 333357888877643211 00
Q ss_pred HHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 146 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 146 ~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.....|+.||+.-+.+.+..+ .|+.+..+.|+.|-.+
T Consensus 162 ----------------------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~ 203 (272)
T d1g0oa_ 162 ----------------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 203 (272)
T ss_dssp ----------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred ----------------------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence 111359999999888876543 6899999999987543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.62 E-value=0.0018 Score=67.53 Aligned_cols=186 Identities=13% Similarity=0.026 Sum_probs=116.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcCCccEEEEcCcc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLREDVNIVFHVAAT 83 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~~VDiViH~AA~ 83 (1217)
-+||+.+.-|....++|.+...+.+ -+.+++ ...+++.+|+++. .+....-+.++|+++|.||.
T Consensus 8 lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~------~~~~~~~~Dv~~~-----~~~~~~~~g~iD~lVnnAG~ 76 (234)
T d1o5ia_ 8 LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR------SGHRYVVCDLRKD-----LDLLFEKVKEVDILVLNAGG 76 (234)
T ss_dssp EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH------TCSEEEECCTTTC-----HHHHHHHSCCCSEEEECCCC
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh------cCCcEEEcchHHH-----HHHHHHHhCCCcEEEecccc
Confidence 3789988899999999988543311 122222 2345778999875 24455556789999999996
Q ss_pred CCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcC
Q psy13944 84 VKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSC 153 (1217)
Q Consensus 84 v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l 153 (1217)
... . +.++..+++|+.|+..+.+.+... .+--++|.+||.......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~------------------------ 132 (234)
T d1o5ia_ 77 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI------------------------ 132 (234)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------------------
T ss_pred cCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc------------------------
Confidence 432 1 235678999999988887776421 233478999987543211
Q ss_pred CcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhc
Q psy13944 154 SHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGL 228 (1217)
Q Consensus 154 ~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~ 228 (1217)
.....|+.||+.-+.+.+..+ .++.+..+.|+.+-.+.... ... ......+..
T Consensus 133 --------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-------~~~-~~~~~~~~~ 190 (234)
T d1o5ia_ 133 --------------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-------LLS-EEKKKQVES 190 (234)
T ss_dssp --------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-------HSC-HHHHHHHHT
T ss_pred --------------cccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhh-------hcC-HHHHHHHHh
Confidence 011369999998887766543 67889999998775542111 000 111111111
Q ss_pred CceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 229 GIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 229 G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
. ....-+...+|++++++.++..
T Consensus 191 ~---------~pl~R~~~pediA~~v~fL~S~ 213 (234)
T d1o5ia_ 191 Q---------IPMRRMAKPEEIASVVAFLCSE 213 (234)
T ss_dssp T---------STTSSCBCHHHHHHHHHHHHSG
T ss_pred c---------CCCCCCcCHHHHHHHHHHHhCh
Confidence 1 1112256789999998877654
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.59 E-value=0.0047 Score=65.32 Aligned_cols=198 Identities=11% Similarity=0.087 Sum_probs=120.7
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCcc--cCCCeEEEEccCCCCCCCCCHHHHHHhc--
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENAN--FTERIVVLTADLQSDGLGLDEKEKKVLR-- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p~--~~~kI~~V~GDl~d~~LGLs~edl~~L~-- 71 (1217)
.|| .-+||+.+.-|....++|.+..-+- -.+.+.++... ...++.++.+|++++ ++.+.++
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~------~~v~~~v~~ 82 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE------EDILSMFSA 82 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH------HHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCH------HHHHHHHHH
Confidence 455 3488999999999999998743321 11222222111 235788999999998 7776654
Q ss_pred -----CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh----cC-CCCeEEEEcCcccccccccccc
Q psy13944 72 -----EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE----MK-NLDSFIYVSTAYSNCNIKKIEE 134 (1217)
Q Consensus 72 -----~~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~----~~-~lk~fV~vSTa~v~g~~~~I~E 134 (1217)
..+|++||+|+.... .+.++..+++|+.|...+.+.+.+ .+ .--++|++||.+.....
T Consensus 83 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----- 157 (257)
T d1xg5a_ 83 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL----- 157 (257)
T ss_dssp HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-----
T ss_pred HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC-----
Confidence 357999999998532 234568899999999887776532 22 23589999997653210
Q ss_pred cccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHh------c-CCCCEEEEecceeccCCCC
Q psy13944 135 KFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREK------M-DKLPLGIVRPSIVMPVVEE 207 (1217)
Q Consensus 135 ~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~------~-~gLPvvIvRPsiV~G~~~e 207 (1217)
|.+ ....|+.||+..+.+.+.. . .++.+..+-|+.+-.+...
T Consensus 158 ---p~~----------------------------~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~ 206 (257)
T d1xg5a_ 158 ---PLS----------------------------VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF 206 (257)
T ss_dssp ---SCG----------------------------GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred ---CCc----------------------------ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh
Confidence 000 0024999999988887533 2 5788888888766443210
Q ss_pred CCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 208 PCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 208 P~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
. +.+.. +........ ..-++-.+|||++++.++...+
T Consensus 207 ~---~~~~~--~~~~~~~~~-------------~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 207 K---LHDKD--PEKAAATYE-------------QMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp H---HTTTC--HHHHHHHHC----------------CBCHHHHHHHHHHHHHSCT
T ss_pred h---cChhh--HHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCChh
Confidence 0 00000 111111111 1124668999999988776544
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.58 E-value=0.002 Score=67.96 Aligned_cols=193 Identities=12% Similarity=0.015 Sum_probs=114.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------CC
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------ED 73 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~~ 73 (1217)
=+||+..--|....++|.+...+.+ .+.+.... ...+.+|++++ ++.+.++ ..
T Consensus 4 lVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~dv~~~------~~~~~~~~~~~~~~G~ 71 (252)
T d1zmta1 4 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA------ETYPQLKPMSE------QEPAELIEAVTSAYGQ 71 (252)
T ss_dssp EESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH------HHCTTSEECCC------CSHHHHHHHHHHHHSC
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh------CcEEEeccCCH------HHHHHHHHHHHHHcCC
Confidence 3688888889999999888433211 11121111 11235788776 3444333 46
Q ss_pred ccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCcccccccccccccccCCCCC
Q psy13944 74 VNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 142 (1217)
Q Consensus 74 VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~d 142 (1217)
+|++||.|+... +. +.++..+++|+.|+..+.+.+.. | .+--++|++||........
T Consensus 72 iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~------------ 139 (252)
T d1zmta1 72 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK------------ 139 (252)
T ss_dssp CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT------------
T ss_pred CCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc------------
Confidence 899999998632 22 23557889999999988877643 1 2335899999976532210
Q ss_pred hHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccc
Q psy13944 143 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMN 217 (1217)
Q Consensus 143 p~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~ 217 (1217)
....|+.||+.-+.+.+..+ .++.+..+.|+.|-.+....... .....
T Consensus 140 --------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~ 192 (252)
T d1zmta1 140 --------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYP-TEPWK 192 (252)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCB-HHHHT
T ss_pred --------------------------cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhh-ccccc
Confidence 01369999999888876653 68999999999887654321100 00000
Q ss_pred hhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 218 GLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 218 g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
........+.+. .+ ..-+...+|++++++.++...
T Consensus 193 ~~~e~~~~~~~~----~p-----l~R~g~pedvA~~v~fL~S~~ 227 (252)
T d1zmta1 193 TNPEHVAHVKKV----TA-----LQRLGTQKELGELVAFLASGS 227 (252)
T ss_dssp TCHHHHHHHHHH----SS-----SSSCBCHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCch
Confidence 001122222211 11 011567899999988877543
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.57 E-value=0.002 Score=68.33 Aligned_cols=197 Identities=13% Similarity=0.083 Sum_probs=118.0
Q ss_pred cccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
-+||+.+.-|....++|.+..-+ .+-+...+.....-.++..+.+|++++ ++++.++ .
T Consensus 13 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g 86 (260)
T d1h5qa_ 13 IVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT------DIVTKTIQQIDADLG 86 (260)
T ss_dssp EEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCH------HHHHHHHHHHHHHSC
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCH------HHHHHHHHHHHHHhC
Confidence 37888888899999999884321 111111111122345789999999998 7776665 3
Q ss_pred CccEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHhHh-c---CCCCeEEEEcCcccccccccccccccCCCC
Q psy13944 73 DVNIVFHVAATVK---FD----EHFQTAFEINCKGTEKLLKMAEE-M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 73 ~VDiViH~AA~v~---f~----e~l~~a~~vNV~GT~~LLelAk~-~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
.+|++||+|+... +. +.++..+++|+.|+..+.+.+.+ | ..-..++.+||......... ....
T Consensus 87 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~---~~~~--- 160 (260)
T d1h5qa_ 87 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS---SLNG--- 160 (260)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE---ETTE---
T ss_pred CCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc---cccc---
Confidence 6899999998742 21 23568899999999988776543 1 33345566666544221110 0000
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGM 216 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~ 216 (1217)
......|+.||+.-+.+.+..+ .|+.+..+-|+.|-.+... +.
T Consensus 161 -------------------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~----~~--- 208 (260)
T d1h5qa_ 161 -------------------------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA----HM--- 208 (260)
T ss_dssp -------------------------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG----GS---
T ss_pred -------------------------CccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh----cc---
Confidence 0111369999999988876643 6789999999987543221 11
Q ss_pred chhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 217 NGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 217 ~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
............ + ..-+.-.+|+|++++.++..
T Consensus 209 --~~~~~~~~~~~~----p-----l~R~g~pedvA~~v~fL~S~ 241 (260)
T d1h5qa_ 209 --DKKIRDHQASNI----P-----LNRFAQPEEMTGQAILLLSD 241 (260)
T ss_dssp --CHHHHHHHHHTC----T-----TSSCBCGGGGHHHHHHHHSG
T ss_pred --CHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhcc
Confidence 112222222211 1 01145578899998877654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.47 E-value=0.0019 Score=69.02 Aligned_cols=152 Identities=13% Similarity=0.158 Sum_probs=99.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh--------HHHhhhcCc---ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA--------FDRLRKENA---NFTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr~~~p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
=+||+.+.-|....++|.+...+.+ .+.+.++.. ....++..+.+|++++ ++++.+++
T Consensus 9 lVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~------~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 9 IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE------DGQDQIINSTLKQ 82 (272)
T ss_dssp EETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH------HHHHHHHHHHHHH
T ss_pred EEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCH------HHHHHHHHHHHHH
Confidence 3788888888899999987433211 112222111 1234689999999998 77766553
Q ss_pred --CccEEEEcCccCC---c-----ccC---HHHHHHHHHHHHHHHHHHhHhc--CCCCeEEEEcCccc-ccccccccccc
Q psy13944 73 --DVNIVFHVAATVK---F-----DEH---FQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYS-NCNIKKIEEKF 136 (1217)
Q Consensus 73 --~VDiViH~AA~v~---f-----~e~---l~~a~~vNV~GT~~LLelAk~~--~~lk~fV~vSTa~v-~g~~~~I~E~~ 136 (1217)
.+|++||+|+... + +.+ ++..+++|+.|+..+.+.+... ++--.+|.++|... ...
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~-------- 154 (272)
T d1xkqa_ 83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA-------- 154 (272)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC--------
T ss_pred hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC--------
Confidence 5799999998752 1 222 5678899999999988876542 12236666666422 110
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.| ....|+.||+.-+.+.+..+ .++.+..+-|+.|-.+
T Consensus 155 --~~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 197 (272)
T d1xkqa_ 155 --QP----------------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG 197 (272)
T ss_dssp --CC----------------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred --CC----------------------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence 00 01359999998888776543 6899999999977544
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.45 E-value=0.003 Score=66.75 Aligned_cols=117 Identities=15% Similarity=0.046 Sum_probs=79.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +.+.++ ..+|+++|+||... + .+.++..+++|+.|+.++.+.+..
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 123 (255)
T d1gega_ 50 GHAVAVKVDVSDRD------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 123 (255)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcch
Confidence 46899999999854 454443 36899999999543 1 244557899999999999887643
Q ss_pred ---cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 ---MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ---~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
.++-.++|++||...... .| ....|+.||+.-+.++++.
T Consensus 124 m~~~~~~g~Iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~ltk~l 165 (255)
T d1gega_ 124 FKKEGHGGKIINACSQAGHVG----------NP----------------------------ELAVYSSSKFAVRGLTQTA 165 (255)
T ss_dssp HHHHTSCEEEEEECCGGGTSC----------CT----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccccccchhhccc----------Cc----------------------------ccccchhCHHHHHhhHHHH
Confidence 223356899988754321 00 1125999999999998774
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+-.+.|-+|-
T Consensus 166 A------~el~~~gIrVN~I~PG~i~ 185 (255)
T d1gega_ 166 A------RDLAPLGITVNGYCPGIVK 185 (255)
T ss_dssp H------HHHGGGTEEEEEEEECSBS
T ss_pred H------HHhhhhCcEEEEEecCccc
Confidence 3 233 446777777787663
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.45 E-value=0.0023 Score=67.78 Aligned_cols=155 Identities=19% Similarity=0.168 Sum_probs=105.5
Q ss_pred cCCC-cccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--
Q psy13944 5 RGKL-GHNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-- 72 (1217)
Q Consensus 5 ~g~~-g~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-- 72 (1217)
.||. -+||+.+.-|....++|.+..-+ ...+.+.++....-.++..+.+|++++ ++.+.+++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~------~~v~~~~~~~ 78 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP------SEVVALFDKA 78 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH------HHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCH------HHHHHHHHHH
Confidence 4663 48899888899999999873221 223444444344456889999999997 77766543
Q ss_pred -----CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCccc-ccccccccccccC
Q psy13944 73 -----DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYS-NCNIKKIEEKFYE 138 (1217)
Q Consensus 73 -----~VDiViH~AA~v~f-------~e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v-~g~~~~I~E~~y~ 138 (1217)
.+|++||+|+.... .+.++..+++|+.|...+++.+.. |.+-.+.+.++|... ...
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~---------- 148 (259)
T d1ja9a_ 79 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG---------- 148 (259)
T ss_dssp HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS----------
T ss_pred HHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC----------
Confidence 57999999998532 123558899999999998888754 222246666666432 110
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
.| ....|+.||+.-+.+.+..+ .++.+..+.|+.+-.
T Consensus 149 ~~----------------------------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T 190 (259)
T d1ja9a_ 149 IP----------------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKT 190 (259)
T ss_dssp CC----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred CC----------------------------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccC
Confidence 00 01369999988887776543 689999999998753
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.41 E-value=0.0033 Score=66.08 Aligned_cols=114 Identities=18% Similarity=0.163 Sum_probs=80.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhc------CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLRE------DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEMK 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~------~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~~ 615 (1217)
.++.++.+|++|++ +.+.+.+ .+|.|||+|+.... .+.++..+++|+.|+.++.++.+..
T Consensus 62 ~~v~~~~~Dv~d~~------~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~- 134 (259)
T d2fr1a1 62 ARTTVAACDVTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL- 134 (259)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-
T ss_pred ccccccccccchHH------HHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-
Confidence 47999999999854 4555543 37999999996432 1334467889999999999888765
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
+..++|++||....-. .| ..-.|+.||+..|.++..+
T Consensus 135 ~~~~iv~~SS~a~~~g----------~~----------------------------~~~~YaAaka~l~~la~~~----- 171 (259)
T d2fr1a1 135 DLTAFVLFSSFASAFG----------AP----------------------------GLGGYAPGNAYLDGLAQQR----- 171 (259)
T ss_dssp CCSEEEEEEEHHHHTC----------CT----------------------------TCTTTHHHHHHHHHHHHHH-----
T ss_pred CCceEeeecchhhccC----------Cc----------------------------ccHHHHHHHHhHHHHHHHH-----
Confidence 5678999999754321 00 0124999999988887432
Q ss_pred ccccccCCCceeEeccCccch
Q psy13944 696 SREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 696 ~~~~~~~~l~~~i~rp~~v~e 716 (1217)
-.+++++..+.|-++.+
T Consensus 172 ----~~~Gi~v~~I~pg~~~~ 188 (259)
T d2fr1a1 172 ----RSDGLPATAVAWGTWAG 188 (259)
T ss_dssp ----HHTTCCCEEEEECCBC-
T ss_pred ----HhCCCCEEECCCCcccC
Confidence 25688888888877754
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.00087 Score=70.81 Aligned_cols=144 Identities=13% Similarity=0.038 Sum_probs=89.4
Q ss_pred hcccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEE
Q psy13944 510 HRSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFH 582 (1217)
Q Consensus 510 ~~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH 582 (1217)
-.|.++++.-|+.+..+...+. ++. ...++..+.+|+++++ +.+.++ ..+|++||
T Consensus 29 ~~G~~V~l~~r~~~~l~~~~~~--------~~~----~~~~~~~~~~Dvs~~~------~v~~~~~~i~~~~g~idilin 90 (244)
T d1yb1a_ 29 KLKSKLVLWDINKHGLEETAAK--------CKG----LGAKVHTFVVDCSNRE------DIYSSAKKVKAEIGDVSILVN 90 (244)
T ss_dssp HTTCEEEEEESCHHHHHHHHHH--------HHH----TTCCEEEEECCTTCHH------HHHHHHHHHHHHTCCCSEEEE
T ss_pred HCCCEEEEEECCHHHHHHHHHH--------HHh----cCCcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCceeEe
Confidence 4577887776655332222211 111 1246899999999964 344332 36899999
Q ss_pred cCccccc----h---hcHHHHHHHHHHHHHHHHHHHHh-c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHH
Q psy13944 583 VAATVKF----D---EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 652 (1217)
Q Consensus 583 ~AA~v~f----~---~~~~~~~~~NV~GT~nLLelA~~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l 652 (1217)
+|+.... + +.++..+++|+.|+.++.+.+.. + .+-.++|.+||....... | ..
T Consensus 91 nag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~----------~---~~---- 153 (244)
T d1yb1a_ 91 NAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV----------P---FL---- 153 (244)
T ss_dssp CCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH----------H---HH----
T ss_pred eccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC----------C---Cc----
Confidence 9996432 1 23447899999999999887653 2 234579999997653210 0 00
Q ss_pred HhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccccccc----CCCceeEeccCccc
Q psy13944 653 INSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCS----HDRGVRVCRNHPVG 715 (1217)
Q Consensus 653 ~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~----~~l~~~i~rp~~v~ 715 (1217)
-.|+.||+.-+.+.+++. .+++ +++.+-.+.|-+|.
T Consensus 154 ---------------------~~Y~asKaal~~~~~~La------~El~~~~~~gI~V~~i~PG~v~ 193 (244)
T d1yb1a_ 154 ---------------------LAYCSSKFAAVGFHKTLT------DELAALQITGVKTTCLCPNFVN 193 (244)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHH------HHHHHTTCTTEEEEEEEETHHH
T ss_pred ---------------------HHHHHHHHHHHHHHHHHH------HHHHhhcCCCEEEEEEEcCCCC
Confidence 149999999888886643 2221 35666666776653
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.0044 Score=65.56 Aligned_cols=123 Identities=11% Similarity=0.098 Sum_probs=79.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +.++++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+..
T Consensus 61 ~~~~~~~~Dls~~~------~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 134 (257)
T d1xg5a_ 61 GTLIPYRCDLSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 134 (257)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 57999999999853 455543 358999999996532 355567899999999988777632
Q ss_pred ---cC-CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 614 ---MK-NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 614 ---~~-~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.+ +-.++|++||.+..... |.+ ....|+.||+..+.++++
T Consensus 135 ~~~~~~~~g~Ii~isS~~~~~~~--------p~~----------------------------~~~~Y~~sKaal~~ltr~ 178 (257)
T d1xg5a_ 135 MKERNVDDGHIININSMSGHRVL--------PLS----------------------------VTHFYSATKYAVTALTEG 178 (257)
T ss_dssp HHHTTCCSCEEEEECCGGGTSCC--------SCG----------------------------GGHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCceEEEechHhcCCC--------CCc----------------------------ccHHHHHHHHHHHhCHHH
Confidence 21 23589999997643210 000 001499999999999976
Q ss_pred hcccccccccccCCCceeEeccCccch
Q psy13944 690 FWGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 690 y~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
+. .+....+.++.+-.+.|-++..
T Consensus 179 la---~el~~~~~~I~vn~i~PG~i~t 202 (257)
T d1xg5a_ 179 LR---QELREAQTHIRATCISPGVVET 202 (257)
T ss_dssp HH---HHHHHTTCCCEEEEEEESCBCS
T ss_pred HH---HHHHhCCCCEEEEEEeCCCCCC
Confidence 53 1101124556666667766643
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.35 E-value=0.0021 Score=68.07 Aligned_cols=117 Identities=15% Similarity=0.076 Sum_probs=80.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|++||+|+.... .+.++..+++|+.|+.++.+.+...
T Consensus 51 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~ 124 (257)
T d2rhca1 51 VEADGRTCDVRSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 124 (257)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHH
Confidence 46899999999864 455443 358999999996432 2345578999999999999988642
Q ss_pred -----CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 615 -----KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 615 -----~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.+-.++|.+||...... .| ....|+.||+.-+.+.++
T Consensus 125 ~~~~~~~~g~Ii~i~S~~~~~~----------~~----------------------------~~~~Y~asKaal~~ltk~ 166 (257)
T d2rhca1 125 GGMLERGTGRIVNIASTGGKQG----------VV----------------------------HAAPYSASKHGVVGFTKA 166 (257)
T ss_dssp TSHHHHTEEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcccccccccccccc----------cc----------------------------cchhHHHHHHHHHHHHHH
Confidence 12347899888654321 00 112599999999999877
Q ss_pred hccccccccccc-CCCceeEeccCccc
Q psy13944 690 FWGCARSREKCS-HDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~~-~~l~~~i~rp~~v~ 715 (1217)
.. ..++ .++.+-.+.|-+|-
T Consensus 167 lA------~el~~~gIrVN~I~PG~i~ 187 (257)
T d2rhca1 167 LG------LELARTGITVNAVCPGFVE 187 (257)
T ss_dssp HH------HHTTTSEEEEEEEEECSBC
T ss_pred HH------HHhhhhCcEEEEEeeCCCC
Confidence 43 3343 34666667786663
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.31 E-value=0.0025 Score=67.15 Aligned_cols=118 Identities=14% Similarity=0.070 Sum_probs=79.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH-h
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE-E 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~-~ 613 (1217)
+++.++.+|+++++ ++++++ ..+|+++|+|+.... .+.++..+++|+.|+..+.+.+. .
T Consensus 52 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 125 (244)
T d1nffa_ 52 DAARYVHLDVTQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKP 125 (244)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcceEEEeecCCHH------HHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhH
Confidence 56889999999854 444443 368999999996432 24456789999999999988664 2
Q ss_pred c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+ .+-.++|++||....... | ....|+.||+..+.+.++..
T Consensus 126 m~~~~~G~Ii~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~ltk~lA 167 (244)
T d1nffa_ 126 MKEAGRGSIINISSIEGLAGT----------V----------------------------ACHGYTATKFAVRGLTKSTA 167 (244)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCcceEEecccccccccc----------c----------------------------cccchhhHHHHHHHHHHHHH
Confidence 2 123579999997643220 0 01159999999999997743
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++--..++.+-.+.|-+|.
T Consensus 168 -----~el~~~gIrVN~I~PG~i~ 186 (244)
T d1nffa_ 168 -----LELGPSGIRVNSIHPGLVK 186 (244)
T ss_dssp -----HHHGGGTEEEEEEEECCBC
T ss_pred -----HHhcccCEEEEEEeeCCcc
Confidence 1222345666666676653
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.28 E-value=0.0022 Score=68.63 Aligned_cols=152 Identities=15% Similarity=0.109 Sum_probs=100.3
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh--------hHHHhhhcCc---ccCCCeEEEEccCCCCCCCCCHHHHHHhcC-----
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD--------AFDRLRKENA---NFTERIVVLTADLQSDGLGLDEKEKKVLRE----- 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~--------vfd~Lr~~~p---~~~~kI~~V~GDl~d~~LGLs~edl~~L~~----- 72 (1217)
=+||+.+--|....++|.+..-+. -.+.+.++.. ....++..+.+|++++ ++++.+++
T Consensus 8 lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 8 IITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA------SGQDDIINTTLAK 81 (274)
T ss_dssp EETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH------HHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCH------HHHHHHHHHHHHH
Confidence 378888888889999998743321 1122222111 1234789999999998 77766553
Q ss_pred --CccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccC
Q psy13944 73 --DVNIVFHVAATVK-----FD----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 73 --~VDiViH~AA~v~-----f~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
.+|+++|+||... +. +.++..+++|+.|+..+.+.+... .+-..++++||......
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~---------- 151 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA---------- 151 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC----------
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc----------
Confidence 5799999998631 11 235678999999999888877542 23346666666432111
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.| . ...|+.||+.-+.+.+..+ .|+.+..+-|+.|-.+
T Consensus 152 ~~---------------------------~-~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 194 (274)
T d1xhla_ 152 HS---------------------------G-YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 194 (274)
T ss_dssp CT---------------------------T-SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred CC---------------------------C-CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence 00 0 1259999999888876543 6899999999988554
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.0029 Score=66.97 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=78.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c---hhcHHHHHHHHHHHHHHHHHHHHh-c
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F---DEHFQTAFEINCKGTEKLLKMAEE-M 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f---~~~~~~~~~~NV~GT~nLLelA~~-~ 614 (1217)
.++.++.+|+++++ +.+.++ ..+|+++|+|+... + .+.++..+++|+.|+..+.+.+.. +
T Consensus 60 ~~~~~~~~Dvs~~~------~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m 133 (255)
T d1fmca_ 60 GQAFACRCDITSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhh
Confidence 46889999999854 444443 36899999999543 2 234557899999999999876653 2
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+-.++|.+||....... | ....|+.||+.-+.+.++..
T Consensus 134 ~~~~~g~Ii~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~lt~~lA- 174 (255)
T d1fmca_ 134 EKNGGGVILTITSMAAENKN----------I----------------------------NMTSYASSKAAASHLVRNMA- 174 (255)
T ss_dssp HHHTCEEEEEECCGGGTCCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred ccccccccccccccchhccc----------c----------------------------ccccchhHHHHHHHHHHHHH-
Confidence 123478999987543210 0 11259999999999987743
Q ss_pred cccccccc-cCCCceeEeccCcc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPV 714 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v 714 (1217)
.++ ..++.+-.+.|-+|
T Consensus 175 -----~el~~~gIrVN~I~PG~i 192 (255)
T d1fmca_ 175 -----FDLGEKNIRVNGIAPGAI 192 (255)
T ss_dssp -----HHHHTTTEEEEEEEECSB
T ss_pred -----HHhCccCeEEEEeeeCcC
Confidence 233 34566666677666
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.19 E-value=0.0048 Score=64.74 Aligned_cols=156 Identities=14% Similarity=0.123 Sum_probs=94.5
Q ss_pred CcccCCCCCCcccHHHHHHHHhcC-hhH------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhcC--------
Q psy13944 8 LGHNGAKTCKHNSILWVAKDFFAD-DAF------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLRE-------- 72 (1217)
Q Consensus 8 ~g~tg~r~kkg~~~~eRL~~~l~~-~vf------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~~-------- 72 (1217)
.-+||+.+.-|....++|.+.... .++ +++.+.......++.++.+|++++ ++++.+++
T Consensus 6 ilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~------~~v~~~~~~i~~~~~~ 79 (250)
T d1yo6a1 6 VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD------KSLDTFVSKVGEIVGS 79 (250)
T ss_dssp EEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCH------HHHHHHHHHHHHHHGG
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCH------HHHHHHHHHHHHHhCC
Confidence 347888888888999998764321 222 111111122346899999999997 66554432
Q ss_pred -CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHhc------C--------CCCeEEEEcCccccccc
Q psy13944 73 -DVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEEM------K--------NLDSFIYVSTAYSNCNI 129 (1217)
Q Consensus 73 -~VDiViH~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~~------~--------~lk~fV~vSTa~v~g~~ 129 (1217)
.+|++||+||... +. +.++..+++|+.|+..+.+.+... + ....++.+|+....-..
T Consensus 80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 159 (250)
T d1yo6a1 80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD 159 (250)
T ss_dssp GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence 3799999999742 11 125578999999999988776421 0 11245555554321110
Q ss_pred ccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCC-ChHHHHHHHHHHHHHHhc-----CCCCEEEEeccee
Q psy13944 130 KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMP-NTYTLSKNACEQMVREKM-----DKLPLGIVRPSIV 201 (1217)
Q Consensus 130 ~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~P-NtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV 201 (1217)
. ... ....| ..|+.||+....+.+..+ .++.+..+-||.|
T Consensus 160 ~-~~~-------------------------------~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v 205 (250)
T d1yo6a1 160 N-TSG-------------------------------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp C-CST-------------------------------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred C-ccc-------------------------------ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence 0 000 00111 259999998888776654 5678887877644
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=96.14 E-value=0.0058 Score=64.86 Aligned_cols=117 Identities=20% Similarity=0.238 Sum_probs=77.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc-----c-h---hcHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK-----F-D---EHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~-----f-~---~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.++.++.+|+++++ +++.++ ..+|++||+||... + + +.++..+++|+.|+..+.+.+.
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~ 127 (268)
T d2bgka1 54 DVISFVHCDVTKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA 127 (268)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhc
Confidence 45888999999853 555554 36899999998532 1 1 3455788999999999998775
Q ss_pred h-c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 613 E-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 613 ~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
. + .+-.++|.+||....... ......|+.||+.-+.++++
T Consensus 128 ~~m~~~~~g~ii~iss~~~~~~~-------------------------------------~~~~~~Y~asKaal~~lt~~ 170 (268)
T d2bgka1 128 RVMIPAKKGSIVFTASISSFTAG-------------------------------------EGVSHVYTATKHAVLGLTTS 170 (268)
T ss_dssp HHHGGGTCEEEEEECCGGGTCCC-------------------------------------TTSCHHHHHHHHHHHHHHHH
T ss_pred chHhhcCCCCccccccccccccc-------------------------------------cccccccchhHHHHHhCHHH
Confidence 3 3 133488888886543210 01112599999999999977
Q ss_pred hcccccccccc-cCCCceeEeccCcc
Q psy13944 690 FWGCARSREKC-SHDRGVRVCRNHPV 714 (1217)
Q Consensus 690 y~~~a~~~~~~-~~~l~~~i~rp~~v 714 (1217)
.. ..+ ..++.+-.+.|-+|
T Consensus 171 lA------~el~~~gIrVN~I~PG~i 190 (268)
T d2bgka1 171 LC------TELGEYGIRVNCVSPYIV 190 (268)
T ss_dssp HH------HHHGGGTEEEEEEEESCC
T ss_pred HH------HHhChhCeEEEecCCCCc
Confidence 43 223 33566656666555
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=96.12 E-value=0.0041 Score=65.85 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=79.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------c-CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------E-DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~-~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +.+.++ . .+|+++|+|+.... .+.++..+++|+.|+..+.+.+..
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~ 130 (259)
T d2ae2a_ 57 FKVEASVCDLSSRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 130 (259)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEeeCCCHH------HHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccc
Confidence 46788999999854 333332 2 48999999996431 234557899999999999887764
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+--++|++||...... .| ....|+.||+.-+.++++.
T Consensus 131 ~m~~~~~G~Ii~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~l 172 (259)
T d2ae2a_ 131 FLKASERGNVVFISSVSGALA----------VP----------------------------YEAVYGATKGAMDQLTRCL 172 (259)
T ss_dssp HHHHTSSEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccc----------cc----------------------------cccchHHHHHHHHHHHHHH
Confidence 2 23458999999754321 01 1125999999999999775
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+-.+.|-+|-
T Consensus 173 A------~el~~~gIrVN~I~PG~i~ 192 (259)
T d2ae2a_ 173 A------FEWAKDNIRVNGVGPGVIA 192 (259)
T ss_dssp H------HHTGGGTEEEEEEEECSBC
T ss_pred H------HHhCcCceEEEEeeeCccc
Confidence 3 233 345666667787764
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.11 E-value=0.0081 Score=62.81 Aligned_cols=150 Identities=15% Similarity=0.095 Sum_probs=89.0
Q ss_pred cccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHH---h--cCccEEEEcCc
Q psy13944 511 RSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVL---R--EDVNIVFHVAA 585 (1217)
Q Consensus 511 ~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L---~--~~vdvVfH~AA 585 (1217)
.|.++++.-|+.+..+.+++ +.+. ..++.++.+|+++++- + ++..+.+ . ..+|+++|+||
T Consensus 28 ~g~~V~~~~r~~~~~~~~~~---------~~~~----~~~~~~~~~Dvs~~~~-v-~~~~~~i~~~~~~~~iDiLvnNAg 92 (248)
T d1snya_ 28 PPQHLFTTCRNREQAKELED---------LAKN----HSNIHILEIDLRNFDA-Y-DKLVADIEGVTKDQGLNVLFNNAG 92 (248)
T ss_dssp CCSEEEEEESCTTSCHHHHH---------HHHH----CTTEEEEECCTTCGGG-H-HHHHHHHHHHHGGGCCSEEEECCC
T ss_pred CCCEEEEEECCHHHHHHHHH---------HHhc----CCcEEEEEEEeccHHH-H-HHHHhhhHHHhhcCCcceEEeecc
Confidence 57888888776644332221 1111 2479999999999751 1 1112221 1 35899999999
Q ss_pred ccc----c-h---hcHHHHHHHHHHHHHHHHHHHHhc--------------CCCcEEEEEccceeecCcccccccccCCC
Q psy13944 586 TVK----F-D---EHFQTAFEINCKGTEKLLKMAEEM--------------KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 643 (1217)
Q Consensus 586 ~v~----f-~---~~~~~~~~~NV~GT~nLLelA~~~--------------~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 643 (1217)
... + + +.++..+++|+.|+..+.+.+... .+..++|.+||....-. .. +.|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~-----~~--~~~ 165 (248)
T d1snya_ 93 IAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ-----GN--TDG 165 (248)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST-----TC--CSC
T ss_pred ccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC-----CC--CCC
Confidence 532 2 1 224468899999999988776421 12347888888642210 00 000
Q ss_pred CChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 644 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 644 ~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
..-.|+.||+.-..+.++.. ++-...++.+..+.|-+|.
T Consensus 166 ----------------------------~~~~Y~aSKaal~~lt~~la-----~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 166 ----------------------------GMYAYRTSKSALNAATKSLS-----VDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp ----------------------------CCHHHHHHHHHHHHHHHHHH-----HHHGGGTCEEEEECCCSBC
T ss_pred ----------------------------ChHHHHHHHHHHHHHHHHHH-----HHhCCCCeEEEEcCCCccc
Confidence 00159999999888886643 1222446777777787774
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.00 E-value=0.0076 Score=62.51 Aligned_cols=185 Identities=14% Similarity=0.058 Sum_probs=111.0
Q ss_pred CCCcccCCCCCCcccHHHHHHHHhcCh-hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHH-------Hh--cCCcc
Q psy13944 6 GKLGHNGAKTCKHNSILWVAKDFFADD-AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKK-------VL--REDVN 75 (1217)
Q Consensus 6 g~~g~tg~r~kkg~~~~eRL~~~l~~~-vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~-------~L--~~~VD 75 (1217)
|+.=+||+.+--|....++|.+-..+- +.+ +.+ .+.......+.+|+.+. ++.. .. ...+|
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~--~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~iD 73 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNID--LSA-NDQADSNILVDGNKNWT------EQEQSILEQTASSLQGSQVD 73 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEE--SSC-CTTSSEEEECCTTSCHH------HHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEE--CCc-hhcccccceeccccCch------hHHHHHHHHHHHHhcCCCee
Confidence 566689999999999999998854331 222 111 12233445556666554 2211 11 24589
Q ss_pred EEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCCCChHHH
Q psy13944 76 IVFHVAATVKF----D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEM 146 (1217)
Q Consensus 76 iViH~AA~v~f----~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~ 146 (1217)
++||+||.... . +.++..+++|+.|+..+.+++... +.--++|++||....... |
T Consensus 74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~----------~------ 137 (235)
T d1ooea_ 74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT----------P------ 137 (235)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------T------
T ss_pred EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc----------c------
Confidence 99999996321 2 224467899999999888887542 222489999997543211 0
Q ss_pred HHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcccccccchh
Q psy13944 147 EQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGL 219 (1217)
Q Consensus 147 ~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~ 219 (1217)
.-..|+.||+..+.+.+..+ .++.+..+.|+.+--+
T Consensus 138 ----------------------~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~--------------- 180 (235)
T d1ooea_ 138 ----------------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP--------------- 180 (235)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---------------
T ss_pred ----------------------cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---------------
Confidence 01369999999999988764 2334555666644221
Q ss_pred HHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhhh
Q psy13944 220 TAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVAR 263 (1217)
Q Consensus 220 ~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~~ 263 (1217)
+...... ......+++.++++++++..+.....
T Consensus 181 --~~~~~~~---------~~~~~~~~~~~~va~~~~~~l~~~~~ 213 (235)
T d1ooea_ 181 --MNRKWMP---------NADHSSWTPLSFISEHLLKWTTETSS 213 (235)
T ss_dssp --HHHHHST---------TCCGGGCBCHHHHHHHHHHHHHCGGG
T ss_pred --chhhhCc---------CCccccCCCHHHHHHHHHHHhcCccc
Confidence 1111111 12234578999999998765554443
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=95.97 E-value=0.0066 Score=63.60 Aligned_cols=114 Identities=16% Similarity=0.078 Sum_probs=75.7
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc-C
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-K 615 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~-~ 615 (1217)
++++.+|+++++ ++++++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 51 ~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~ 124 (242)
T d1ulsa_ 51 AHPVVMDVADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR 124 (242)
T ss_dssp CEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEecCCHH------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccc
Confidence 567899999854 455443 368999999996431 2345578999999999999877642 1
Q ss_pred --CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 616 --NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 616 --~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
+-..++.+||+...+. | ....|+.||+.-+.+.++..
T Consensus 125 ~~~~~~i~~~ss~~~~~~-----------~----------------------------~~~~Y~asKaal~~ltk~lA-- 163 (242)
T d1ulsa_ 125 EKNPGSIVLTASRVYLGN-----------L----------------------------GQANYAASMAGVVGLTRTLA-- 163 (242)
T ss_dssp TTCCEEEEEECCGGGGCC-----------T----------------------------TCHHHHHHHHHHHHHHHHHH--
T ss_pred ccccceeeeeccccccCC-----------C----------------------------CCcchHHHHHHHHHHHHHHH--
Confidence 3345666676532221 0 01259999999999987643
Q ss_pred ccccccc-cCCCceeEeccCccc
Q psy13944 694 ARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 694 a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+-.+.|-+|-
T Consensus 164 ----~ela~~gIrVN~I~PG~v~ 182 (242)
T d1ulsa_ 164 ----LELGRWGIRVNTLAPGFIE 182 (242)
T ss_dssp ----HHHGGGTEEEEEEEECSBC
T ss_pred ----HHHhhhCcEEEEEeeCccc
Confidence 233 345777677777663
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=95.93 E-value=0.0055 Score=64.86 Aligned_cols=117 Identities=11% Similarity=0.058 Sum_probs=80.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----ch----hcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f~----~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++..+.+|+++++ +.+.++ ..+|+++|+||... +. +.++..+++|+.|+.++.+.+..
T Consensus 55 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 128 (258)
T d1iy8a_ 55 AEVLTTVADVSDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLK 128 (258)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CeEEEEeccCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHh
Confidence 47899999999854 455443 36899999998431 32 34557899999999999987743
Q ss_pred -c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 -M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 -~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ .+-.++|.+||....-. .| ....|+.||+..+.++++.
T Consensus 129 ~m~~~~~G~Ii~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~l 170 (258)
T d1iy8a_ 129 IMREQGSGMVVNTASVGGIRG----------IG----------------------------NQSGYAAAKHGVVGLTRNS 170 (258)
T ss_dssp HHHHHTCCEEEEECCGGGTSB----------CS----------------------------SBHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCcccccHhhccC----------CC----------------------------CchHHHHHHHHHHHHHHHH
Confidence 2 13457999999754321 01 0125999999999998764
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+-.+.|-+|.
T Consensus 171 A------~el~~~gIrVN~i~PG~v~ 190 (258)
T d1iy8a_ 171 A------VEYGRYGIRINAIAPGAIW 190 (258)
T ss_dssp H------HHHGGGTCEEEEEEECSBC
T ss_pred H------HHhCccCceEEEEeeCccc
Confidence 3 223 345777777887764
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=95.93 E-value=0.0046 Score=65.20 Aligned_cols=120 Identities=18% Similarity=0.104 Sum_probs=78.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +.+.++ ..+|+++|+|+.... .+.++..+++|+.|+..+.+.+..
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~ 127 (251)
T d1zk4a1 54 DQIQFFQHDSSDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127 (251)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHH
Confidence 47899999999854 444443 368999999996421 244557899999999999988753
Q ss_pred cC--CC-cEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 MK--NL-DSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~~--~l-k~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+. +- .++|.+||...... .| ....|+.||+..+.+.++.
T Consensus 128 m~~~~~gg~Ii~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~l 169 (251)
T d1zk4a1 128 MKNKGLGASIINMSSIEGFVG----------DP----------------------------SLGAYNASKGAVRIMSKSA 169 (251)
T ss_dssp HTTSSSCEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCceEeeeccceecc----------CC----------------------------CchhHHHHHHHHhcchHHH
Confidence 32 22 37899998754211 01 0125999999988888654
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. .+..--..++.+-.+.|-.|-
T Consensus 170 A---~e~~l~~~gIrVN~I~PG~i~ 191 (251)
T d1zk4a1 170 A---LDCALKDYDVRVNTVHPGYIK 191 (251)
T ss_dssp H---HHHHHTTCSEEEEEEEECCBC
T ss_pred H---HHHhcCCCcEEEEEEeCCCCC
Confidence 3 100011345666666776664
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.92 E-value=0.021 Score=59.54 Aligned_cols=152 Identities=15% Similarity=0.132 Sum_probs=92.2
Q ss_pred ccCCCCCCcccHHHHHHHHhcC--hhH---------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD--DAF---------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~--~vf---------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
+||+..--|....++|.++-+. .++ +.+.+. .....++.++.+|++++ ++.+.++
T Consensus 7 ITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~------~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 7 ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL-AKNHSNIHILEIDLRNF------DAYDKLVADIEGVT 79 (248)
T ss_dssp ESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHH-HHHCTTEEEEECCTTCG------GGHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HhcCCcEEEEEEEeccH------HHHHHHHhhhHHHh
Confidence 5666666666776666532111 111 111111 11235899999999998 5554332
Q ss_pred --CCccEEEEcCccCC----ccc-C---HHHHHHHHHHHHHHHHHHhHhc--------------CCCCeEEEEcCccccc
Q psy13944 72 --EDVNIVFHVAATVK----FDE-H---FQTAFEINCKGTEKLLKMAEEM--------------KNLDSFIYVSTAYSNC 127 (1217)
Q Consensus 72 --~~VDiViH~AA~v~----f~e-~---l~~a~~vNV~GT~~LLelAk~~--------------~~lk~fV~vSTa~v~g 127 (1217)
..+|++||.||... +.+ + ++..+++|+.|+..+.+.+... .+-.++|.+||....-
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 34799999999742 211 2 4578999999999887766421 1235789998864311
Q ss_pred ccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceec
Q psy13944 128 NIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVM 202 (1217)
Q Consensus 128 ~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~ 202 (1217)
. . .+.+ . -..|+.||+.-..+.+..+ .++.+..+-|+.|-
T Consensus 160 ~-----~--~~~~---------------------------~-~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 160 Q-----G--NTDG---------------------------G-MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp T-----T--CCSC---------------------------C-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred C-----C--CCCC---------------------------C-hHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 0 0 0000 0 0269999998887765543 67888888887664
Q ss_pred c
Q psy13944 203 P 203 (1217)
Q Consensus 203 G 203 (1217)
-
T Consensus 205 T 205 (248)
T d1snya_ 205 T 205 (248)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=95.90 E-value=0.0069 Score=63.47 Aligned_cols=117 Identities=16% Similarity=0.131 Sum_probs=80.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.+...+.+|+++++ +.++++ ..+|+++|+|+... + .+.++..+++|+.|+..+.+.+...
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 123 (243)
T d1q7ba_ 50 ANGKGLMLNVTDPA------SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRA 123 (243)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCHH------HhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHH
Confidence 45788999999853 444443 36899999998543 1 2455578999999999999888532
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+-.++|++||....... | ....|+.||+..+.+.++..
T Consensus 124 m~~~~~G~II~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~lt~~lA 165 (243)
T d1q7ba_ 124 MMKKRHGRIITIGSVVGTMGN----------G----------------------------GQANYAAAKAGLIGFSKSLA 165 (243)
T ss_dssp HHHHTCEEEEEECCHHHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEeeeecchhhcCCC----------C----------------------------CCHHHHHHHHHHHHHHHHHH
Confidence 133589999997543210 0 01259999999999997753
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+-.+.|-+|-
T Consensus 166 ------~ela~~gIrVN~I~PG~i~ 184 (243)
T d1q7ba_ 166 ------REVASRGITVNVVAPGFIE 184 (243)
T ss_dssp ------HHHGGGTEEEEEEEECSBC
T ss_pred ------HHhCccCeEEEEEecceEe
Confidence 233 445777777787664
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=95.88 E-value=0.0059 Score=64.05 Aligned_cols=117 Identities=12% Similarity=0.161 Sum_probs=81.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+++|+|+.... .+.++..+++|+.|+.++.+.+...
T Consensus 51 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 124 (244)
T d1edoa_ 51 GQAITFGGDVSKEA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 46889999999853 455443 368999999996431 2445578999999999998877542
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+--++|++||...... .| ....|+.||+.-+.+.++..
T Consensus 125 m~~~~~G~IVnisS~~~~~~----------~~----------------------------~~~~Y~asKaal~~ltk~lA 166 (244)
T d1edoa_ 125 MMKKRKGRIINIASVVGLIG----------NI----------------------------GQANYAAAKAGVIGFSKTAA 166 (244)
T ss_dssp HHHHTCEEEEEECCTHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEEcChhhcCC----------CC----------------------------CCHHHHHHHHHHHHChHHHH
Confidence 13458999999754321 00 01259999999998887643
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+-.+.|-+|-
T Consensus 167 ------~el~~~gIrvN~I~PG~i~ 185 (244)
T d1edoa_ 167 ------REGASRNINVNVVCPGFIA 185 (244)
T ss_dssp ------HHHHTTTEEEEEEEECSBC
T ss_pred ------HHHhhhCcEEEEEecceec
Confidence 233 446777777887774
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.85 E-value=0.006 Score=64.24 Aligned_cols=117 Identities=11% Similarity=0.081 Sum_probs=80.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|+++|+|+.... .+.++..+++|+.|+..+.+.+...
T Consensus 59 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 132 (251)
T d2c07a1 59 YESSGYAGDVSKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR 132 (251)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcc
Confidence 46899999999853 455544 368999999996431 2456688999999999998876531
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+-.++|++||...... .| ..-.|+.||+.-+.+.++..
T Consensus 133 m~~~~~G~IVnisS~~~~~~----------~~----------------------------~~~~Y~asKaal~~ltr~lA 174 (251)
T d2c07a1 133 MINNRYGRIINISSIVGLTG----------NV----------------------------GQANYSSSKAGVIGFTKSLA 174 (251)
T ss_dssp HHHHTCEEEEEECCTHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCeEEEEECCHHhcCC----------CC----------------------------CCHHHHHHHHHHHHHHHHHH
Confidence 13458999999764321 00 01159999999999997743
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+-.+.|-+|-
T Consensus 175 ------~el~~~gIrVN~V~PG~v~ 193 (251)
T d2c07a1 175 ------KELASRNITVNAIAPGFIS 193 (251)
T ss_dssp ------HHHGGGTEEEEEEEECSBC
T ss_pred ------HHhhhhCeEEEEEccCCEe
Confidence 233 345667677776663
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.82 E-value=0.013 Score=62.01 Aligned_cols=118 Identities=14% Similarity=0.166 Sum_probs=75.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh--------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR--------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~--------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++..+.+|+++++ +.+.++ ..+|+++|+||.... .+.++..+++|+.|+..+.+.+..
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 130 (259)
T d1xq1a_ 57 FQVTGSVCDASLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP 130 (259)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeccCCCHH------HHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhh
Confidence 46899999999854 333332 248999999996432 244567899999999999887754
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+--++|++||....... .....|+.||+.-+.++++.
T Consensus 131 ~m~~~~~G~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~lt~~l 172 (259)
T d1xq1a_ 131 LLKASGCGNIIFMSSIAGVVSA--------------------------------------SVGSIYSATKGALNQLARNL 172 (259)
T ss_dssp HHHHHSSCEEEEEC------------------------------------------------CCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccc--------------------------------------cccccccccccchhhhhHHH
Confidence 2 133589999997543210 01125999999999988764
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++-...++.+-.+.|-+|.
T Consensus 173 A-----~e~~~~gIrVN~V~PG~i~ 192 (259)
T d1xq1a_ 173 A-----CEWASDGIRANAVAPAVIA 192 (259)
T ss_dssp H-----HHHGGGTCEEEEEECCSCC
T ss_pred H-----HHhcccCeEEEEeccCccc
Confidence 3 2223455777777787764
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=95.81 E-value=0.014 Score=61.61 Aligned_cols=117 Identities=15% Similarity=0.008 Sum_probs=80.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +.++++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+...
T Consensus 51 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~ 124 (254)
T d1hdca_ 51 DAARYQHLDVTIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124 (254)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcccCCHH------HHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHH
Confidence 56899999999853 455543 368999999996431 2345578999999999999877532
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+-.++|++||...... .| ....|+.||+..+.+.++..
T Consensus 125 m~~~~~G~II~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~lA 166 (254)
T d1hdca_ 125 MKDAGGGSIVNISSAAGLMG----------LA----------------------------LTSSYGASKWGVRGLSKLAA 166 (254)
T ss_dssp HHHHTCEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCeecccccchhccc----------cc----------------------------chhhHHHHHHHHHHHHHHHH
Confidence 13458999999764321 00 11259999999999997743
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+-.+.|-+|-
T Consensus 167 ------~e~a~~gIrVN~I~PG~v~ 185 (254)
T d1hdca_ 167 ------VELGTDRIRVNSVHPGMTY 185 (254)
T ss_dssp ------HHHGGGTEEEEEEEECSBC
T ss_pred ------HHhCCCceEEEEeeeCccc
Confidence 233 345666667776663
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.79 E-value=0.0033 Score=68.27 Aligned_cols=154 Identities=14% Similarity=0.112 Sum_probs=97.6
Q ss_pred CC-CcccCCCCCCcccHHHHHHHHhcChhH--------------HHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh
Q psy13944 6 GK-LGHNGAKTCKHNSILWVAKDFFADDAF--------------DRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL 70 (1217)
Q Consensus 6 g~-~g~tg~r~kkg~~~~eRL~~~l~~~vf--------------d~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L 70 (1217)
|| +=+||+...-|....++|.+..-+.+. +.+.+...+...+...+..|+.+. ++.+.+
T Consensus 7 gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~ 80 (302)
T d1gz6a_ 7 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSV------EAGEKL 80 (302)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCG------GGHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchH------HHHHHH
Confidence 44 337888888888888888874322111 111111111222344566788776 343332
Q ss_pred -------cCCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHh-c--CCCCeEEEEcCccccccccccc
Q psy13944 71 -------REDVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIE 133 (1217)
Q Consensus 71 -------~~~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~-~--~~lk~fV~vSTa~v~g~~~~I~ 133 (1217)
...+|++||.||.... . +.++..+++|+.|+..+.+.+.. | .+--++|++||......
T Consensus 81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~----- 155 (302)
T d1gz6a_ 81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG----- 155 (302)
T ss_dssp HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----
T ss_pred HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCC-----
Confidence 3468999999998532 1 23568999999999998887643 1 12348999999754211
Q ss_pred ccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceecc
Q psy13944 134 EKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 134 E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G 203 (1217)
.| ....|+.||+.-+.+.+..+ .|+.+..+-|+.+..
T Consensus 156 -----~~----------------------------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t 197 (302)
T d1gz6a_ 156 -----NF----------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSR 197 (302)
T ss_dssp -----CT----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCST
T ss_pred -----CC----------------------------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCc
Confidence 00 01369999998888776543 678888899986533
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=95.77 E-value=0.015 Score=60.62 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=78.3
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ ++++++ ..+|+++|+|+.... .+.++..+++|+.|+..+.+.+...
T Consensus 57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (240)
T d2bd0a1 57 ALTDTITADISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 130 (240)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHH
Confidence 46889999999954 444443 358999999996432 2455678999999999998887642
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+-.++|++||...... .| ....|+.||+.-+.+.++..
T Consensus 131 m~~~~~G~Ii~isS~~~~~~----------~~----------------------------~~~~Y~asK~al~~lt~~la 172 (240)
T d2bd0a1 131 MERQHSGHIFFITSVAATKA----------FR----------------------------HSSIYCMSKFGQRGLVETMR 172 (240)
T ss_dssp HHHHTCEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEechhhcCC----------CC----------------------------CChHHHHHHHHHHHHHHHHH
Confidence 13358999998754321 01 01259999999888887643
Q ss_pred ccccccccc-cCCCceeEeccCcc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPV 714 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v 714 (1217)
..+ ..++.+-.+.|-+|
T Consensus 173 ------~el~~~gIrvn~i~PG~v 190 (240)
T d2bd0a1 173 ------LYARKCNVRITDVQPGAV 190 (240)
T ss_dssp ------HHHTTTTEEEEEEEECCB
T ss_pred ------HHhCcCCeEEEEeeeCcc
Confidence 223 23456666667666
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=95.74 E-value=0.0058 Score=64.65 Aligned_cols=119 Identities=17% Similarity=0.164 Sum_probs=80.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----ch----hcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f~----~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ +.+.++ ..+|+++|+||... +. +.++..+++|+.|+..+.+.+..
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 127 (260)
T d1zema1 54 VEARSYVCDVTSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR 127 (260)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHh
Confidence 46899999999853 444443 36899999999542 22 33457889999999999887753
Q ss_pred -c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 -M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 -~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ .+--++|++||...... .| ....|+.||+.-+.++++.
T Consensus 128 ~m~~~~~G~II~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~ltk~l 169 (260)
T d1zema1 128 QMITQNYGRIVNTASMAGVKG----------PP----------------------------NMAAYGTSKGAIIALTETA 169 (260)
T ss_dssp HHHHHTCEEEEEECCHHHHSC----------CT----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCeeechhhccC----------Cc----------------------------chHHHHHHHHHHHHHHHHH
Confidence 2 23458999999754321 01 0015999999999998774
Q ss_pred cccccccccccCCCceeEeccCccch
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVGE 716 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~e 716 (1217)
. ++--..++.+-.+.|-.|--
T Consensus 170 A-----~el~~~gIrVN~I~PG~v~T 190 (260)
T d1zema1 170 A-----LDLAPYNIRVNAISPGYMGP 190 (260)
T ss_dssp H-----HHHGGGTEEEEEEEECSBCS
T ss_pred H-----HHhhhhCCEEEEeccCcccC
Confidence 3 12224457777777877643
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.74 E-value=0.019 Score=59.71 Aligned_cols=118 Identities=16% Similarity=0.180 Sum_probs=77.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
+++..+.+|+++++ +.++++ ..+|+++|+||.... .+.++..+++|+.|+..+.+.+..
T Consensus 45 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 118 (237)
T d1uzma1 45 KGLFGVEVDVTDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS 118 (237)
T ss_dssp TTSEEEECCTTCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCHH------HHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhc
Confidence 45677899999854 444443 358999999995431 245567899999999988776542
Q ss_pred c--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
+ .+-.++|++||....... | ..-.|+.||+.-+.++++..
T Consensus 119 m~~~~~g~Iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~lt~~lA 160 (237)
T d1uzma1 119 MQRNKFGRMIFIGSVSGLWGI----------G----------------------------NQANYAASKAGVIGMARSIA 160 (237)
T ss_dssp HHHTTCEEEEEECCCCC-------------------------------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEcchhhccCC----------c----------------------------ccHHHHHHHHHHHHHHHHHH
Confidence 1 244589999997653210 0 11259999999999987754
Q ss_pred ccccccccccCCCceeEeccCccc
Q psy13944 692 GCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++--..++.+-.+.|-.|-
T Consensus 161 -----~e~~~~gIrVN~I~PG~v~ 179 (237)
T d1uzma1 161 -----RELSKANVTANVVAPGYID 179 (237)
T ss_dssp -----HHHGGGTEEEEEEEECSBC
T ss_pred -----hhhhcCCceeeeeeeCcCC
Confidence 1222345666666776663
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.67 E-value=0.0037 Score=66.58 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=74.1
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh------HHHh---hhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA------FDRL---RKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v------fd~L---r~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
=+||+...-|....++|.+.....+ -+++ .++......++.++.+|+++. ++.+.++ .
T Consensus 7 lVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~------~sv~~~~~~~~~~~g 80 (275)
T d1wmaa1 7 LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL------QSIRALRDFLRKEYG 80 (275)
T ss_dssp EESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH------HHHHHHHHHHHHHHS
T ss_pred EECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCH------HHHHHHHHHHHHhcC
Confidence 3788888888888888876422211 1111 111112235688999999998 6665443 3
Q ss_pred CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCccc
Q psy13944 73 DVNIVFHVAATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYS 125 (1217)
Q Consensus 73 ~VDiViH~AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v 125 (1217)
.+|++||.||.... . +.++..+++|+.|+..+.+.+... +.--++|.+||...
T Consensus 81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~ 141 (275)
T d1wmaa1 81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS 141 (275)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence 68999999997521 1 234568999999999999887542 22248999999654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.67 E-value=0.0077 Score=63.41 Aligned_cols=118 Identities=12% Similarity=0.055 Sum_probs=79.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHh-cC-----
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEE-MK----- 615 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~-~~----- 615 (1217)
.++.++.+|+++++ +++.++ ..+|+++|+|+... ..++++.+++|+.|+.++..++.. +.
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~ 126 (254)
T d2gdza1 54 QKTLFIQCDVADQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG 126 (254)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcC
Confidence 46899999999853 455443 36899999999754 567888999999999988877753 21
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
.-.++|.+||....-. .| ....|+.||+.-+.+.+++. +|
T Consensus 127 ~~g~Iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~ltrs~a-la- 166 (254)
T d2gdza1 127 EGGIIINMSSLAGLMP----------VA----------------------------QQPVYCASKHGIVGFTRSAA-LA- 166 (254)
T ss_dssp CCEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH-HH-
T ss_pred CCcEEEeeccHhhccC----------CC----------------------------CccchHHHHHHHHHHHHHHH-HH-
Confidence 1236999999754221 11 01159999999888875431 22
Q ss_pred ccccc-cCCCceeEeccCccc
Q psy13944 696 SREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 696 ~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+-.+.|-+|-
T Consensus 167 --~e~~~~gIrVN~I~PG~i~ 185 (254)
T d2gdza1 167 --ANLMNSGVRLNAICPGFVN 185 (254)
T ss_dssp --HHHHTCCEEEEEEEESCBS
T ss_pred --HHhcCCCEEEEEEEcCCCC
Confidence 122 345666667787663
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.66 E-value=0.017 Score=60.69 Aligned_cols=118 Identities=15% Similarity=0.096 Sum_probs=79.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +++.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+..
T Consensus 55 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 128 (251)
T d1vl8a_ 55 VETMAFRCDVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 128 (251)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhc
Confidence 46889999999854 454443 368999999996431 234557899999999999988754
Q ss_pred cC--CCcEEEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 MK--NLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~~--~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+. +-.++|.+||... .+. .+ ....|+.||+.-+.++++.
T Consensus 129 m~~~~~G~Ii~i~S~~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~l 170 (251)
T d1vl8a_ 129 LRESDNPSIINIGSLTVEEVT----------MP----------------------------NISAYAASKGGVASLTKAL 170 (251)
T ss_dssp HTTCSSCEEEEECCGGGTCCC----------SS----------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhcccc----------Cc----------------------------cccchHHHHHhHHHHHHHH
Confidence 32 2348999988532 111 00 0125999999999999775
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++--..++.+-.+.|-+|-
T Consensus 171 A-----~e~~~~gIrVN~I~PG~i~ 190 (251)
T d1vl8a_ 171 A-----KEWGRYGIRVNVIAPGWYR 190 (251)
T ss_dssp H-----HHHGGGTCEEEEEEECCBC
T ss_pred H-----HHhcccCeEEEEEeeCccc
Confidence 3 1222446777777887664
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=95.63 E-value=0.0071 Score=63.81 Aligned_cols=150 Identities=15% Similarity=0.060 Sum_probs=91.7
Q ss_pred hcccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHH---hcCccEEEEcCcc
Q psy13944 510 HRSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVL---REDVNIVFHVAAT 586 (1217)
Q Consensus 510 ~~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L---~~~vdvVfH~AA~ 586 (1217)
-.|.+++++-|..+..+.+.+ +....+ ..++.++..|++.+.-.+ .+..+.+ ...+|+++|+|+.
T Consensus 27 ~~G~~vii~~r~~~~~~~~~~---------~~~~~~--~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~g~iDilvnnAG~ 94 (254)
T d1sbya1 27 KRNLKNFVILDRVENPTALAE---------LKAINP--KVNITFHTYDVTVPVAES-KKLLKKIFDQLKTVDILINGAGI 94 (254)
T ss_dssp HTCCSEEEEEESSCCHHHHHH---------HHHHCT--TSEEEEEECCTTSCHHHH-HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HCCCEEEEEECCcccHHHHHH---------HHhhCC--CCCEEEEEeecCCCHHHH-HHHHHHHHHHcCCCCEEEeCCCC
Confidence 457777777655433222211 222211 357899999998542000 1112222 2468999999997
Q ss_pred ccchhcHHHHHHHHHHHHHHHHHHHHh-cC-----CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcch
Q psy13944 587 VKFDEHFQTAFEINCKGTEKLLKMAEE-MK-----NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTE 660 (1217)
Q Consensus 587 v~f~~~~~~~~~~NV~GT~nLLelA~~-~~-----~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~ 660 (1217)
.. .+.++..+++|+.|+.++..++.. +. ...++|++||....-. .|
T Consensus 95 ~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~----------~~----------------- 146 (254)
T d1sbya1 95 LD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA----------IH----------------- 146 (254)
T ss_dssp CC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----------CT-----------------
T ss_pred CC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC----------CC-----------------
Confidence 65 678889999999999999887764 21 2346999988754321 01
Q ss_pred hhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 661 LTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 661 ~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
....|+.||+.-..++++.. ++-...++.+..+.|-+|-
T Consensus 147 -----------~~~~Y~asKaal~~~t~~la-----~el~~~gIrVn~I~PG~v~ 185 (254)
T d1sbya1 147 -----------QVPVYSASKAAVVSFTNSLA-----KLAPITGVTAYSINPGITR 185 (254)
T ss_dssp -----------TSHHHHHHHHHHHHHHHHHH-----HHHHHHSEEEEEEEECSEE
T ss_pred -----------CCHHHHHHHHHHHHHHHHHH-----hhccccCeEEEEEEeCCCc
Confidence 01159999999888886643 1222445666667776663
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.63 E-value=0.014 Score=61.25 Aligned_cols=144 Identities=13% Similarity=0.077 Sum_probs=92.7
Q ss_pred cccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHhc-----------CccE
Q psy13944 511 RSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLRE-----------DVNI 579 (1217)
Q Consensus 511 ~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~~-----------~vdv 579 (1217)
.|.++.+.-|+.+..+.+.+. +....+ ..++.++.+|+++++ +.+++.+ .+|+
T Consensus 32 ~G~~Vv~~~r~~~~l~~~~~~--------l~~~~~--~~~~~~~~~Dvs~~~------~v~~l~~~~~~~~~~~~~~~~~ 95 (259)
T d1oaaa_ 32 PGSVMLVSARSESMLRQLKEE--------LGAQQP--DLKVVLAAADLGTEA------GVQRLLSAVRELPRPEGLQRLL 95 (259)
T ss_dssp TTCEEEEEESCHHHHHHHHHH--------HHHHCT--TSEEEEEECCTTSHH------HHHHHHHHHHHSCCCTTCCEEE
T ss_pred CCCEEEEEECCHHHHHHHHHH--------HHhhcC--CceEEEEEccCCCHH------HHHHHHHHHHHhhhhccCceEE
Confidence 577888877655433332222 222211 247899999999853 4555431 3579
Q ss_pred EEEcCcccc------ch----hcHHHHHHHHHHHHHHHHHHHHhc-CC----CcEEEEEccceeecCcccccccccCCCC
Q psy13944 580 VFHVAATVK------FD----EHFQTAFEINCKGTEKLLKMAEEM-KN----LDSFIYVSTAYSNCNIKKIEEKFYEPLY 644 (1217)
Q Consensus 580 VfH~AA~v~------f~----~~~~~~~~~NV~GT~nLLelA~~~-~~----lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 644 (1217)
++|.||... +. +.++..+++|+.|+..+.+.+... .. -.++|++||...... .|
T Consensus 96 lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~----------~~- 164 (259)
T d1oaaa_ 96 LINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP----------YK- 164 (259)
T ss_dssp EEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC----------CT-
T ss_pred EEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC----------Cc-
Confidence 999998532 11 345578999999999999988653 21 237899998754221 01
Q ss_pred ChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 645 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 645 ~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
....|+.||+..+.++++.. ....++.+-.+.|-+|.
T Consensus 165 ---------------------------~~~~Y~asKaal~~lt~~la-------~e~~gIrVn~v~PG~i~ 201 (259)
T d1oaaa_ 165 ---------------------------GWGLYCAGKAARDMLYQVLA-------AEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHH-------HHCTTEEEEEEECCSBS
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHH-------hCCCCCEEEEEEcCCCC
Confidence 11259999999999997753 22567777777887775
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.0046 Score=65.25 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=79.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc----ch----hcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~----f~----~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ ++++++ ..+|++||+|+... +. +.++..+++|+.|+.++.+.+..
T Consensus 51 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p 124 (250)
T d1ydea1 51 PGAVFILCDVTQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP 124 (250)
T ss_dssp TTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCeEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhH
Confidence 35788999999854 555543 35899999999432 22 33557899999999999887763
Q ss_pred c-C-CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 614 M-K-NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 614 ~-~-~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
. + +--++|.+||...... .| ....|+.||+.-+.+.++..
T Consensus 125 ~m~~~~G~Ii~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~lA 166 (250)
T d1ydea1 125 YLRKSQGNVINISSLVGAIG----------QA----------------------------QAVPYVATKGAVTAMTKALA 166 (250)
T ss_dssp HHHHHTCEEEEECCHHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCccccccccccc----------cc----------------------------CcchhHHHHhhHHHHHHHHH
Confidence 2 1 1248999999754321 00 11259999999999987753
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
.++ ..++.+-.+.|-+|.
T Consensus 167 ------~e~a~~gIrVN~I~PG~i~ 185 (250)
T d1ydea1 167 ------LDESPYGVRVNCISPGNIW 185 (250)
T ss_dssp ------HHHGGGTCEEEEEEECSBC
T ss_pred ------HHhcccCeEEEEEeeCCCC
Confidence 233 446777777787764
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.58 E-value=0.0096 Score=62.99 Aligned_cols=148 Identities=13% Similarity=0.062 Sum_probs=87.3
Q ss_pred hcccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEE
Q psy13944 510 HRSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFH 582 (1217)
Q Consensus 510 ~~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH 582 (1217)
-.|.++++.-|+.+..+.+.+. ++... ....++.++.+|+++++ +.++++ ..+|+++|
T Consensus 27 ~~Ga~V~~~~r~~~~l~~~~~~--------l~~~~-~~~~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvn 91 (264)
T d1spxa_ 27 REGAKVTITGRHAERLEETRQQ--------ILAAG-VSEQNVNSVVADVTTDA------GQDEILSTTLGKFGKLDILVN 91 (264)
T ss_dssp HTTCEEEEEESCHHHHHHHHHH--------HHHTT-CCGGGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEE
T ss_pred HCCCEEEEEECCHHHHHHHHHH--------HHhcC-CCcCceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEeec
Confidence 3577777776655333322222 11111 11346999999999854 455443 36899999
Q ss_pred cCcccc-----------chhcHHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEcccee-ecCcccccccccCCCCChhH
Q psy13944 583 VAATVK-----------FDEHFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIE 648 (1217)
Q Consensus 583 ~AA~v~-----------f~~~~~~~~~~NV~GT~nLLelA~~~--~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~ 648 (1217)
+|+... -.+.++..+++|+.|+..+.+.+... ++-..+|.++|... ... .|
T Consensus 92 nAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~----------~~----- 156 (264)
T d1spxa_ 92 NAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA----------TP----- 156 (264)
T ss_dssp CCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC----------CT-----
T ss_pred ccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc----------CC-----
Confidence 998531 11345578999999999998887642 11235666655432 111 01
Q ss_pred HHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 649 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 649 ~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
....|+.||+.-+.++++.. ++--..++.+-.+.|-+|.
T Consensus 157 -----------------------~~~~Y~asKaal~~lt~~lA-----~el~~~gIrVN~V~PG~v~ 195 (264)
T d1spxa_ 157 -----------------------DFPYYSIAKAAIDQYTRNTA-----IDLIQHGIRVNSISPGLVA 195 (264)
T ss_dssp -----------------------TSHHHHHHHHHHHHHHHHHH-----HHHGGGTCEEEEEEECCBC
T ss_pred -----------------------CchhhhhhhhhHHHHHHHHH-----HHhcccCeEEEEEeeCCCC
Confidence 01149999999998887643 1222445777777776664
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=95.49 E-value=0.011 Score=62.36 Aligned_cols=74 Identities=20% Similarity=0.202 Sum_probs=54.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.+..++.+|+++++ +.+.++ ..+|+++|+|+.... .+.++..+++|+.|+..+.+.+..
T Consensus 52 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 125 (253)
T d1hxha_ 52 ERSMFVRHDVSSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125 (253)
T ss_dssp TTEEEECCCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCeEEEEeecCCHH------HHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46788999999853 444443 368999999996432 244567899999999998887764
Q ss_pred cC-CCcEEEEEcccee
Q psy13944 614 MK-NLDSFIYVSTAYS 628 (1217)
Q Consensus 614 ~~-~lk~fV~vSTa~v 628 (1217)
++ +--++|++||...
T Consensus 126 m~~~~G~Iv~isS~~~ 141 (253)
T d1hxha_ 126 MKETGGSIINMASVSS 141 (253)
T ss_dssp HTTTCEEEEEECCGGG
T ss_pred HHhcCCceecccchhh
Confidence 22 2358999999754
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=95.49 E-value=0.023 Score=59.56 Aligned_cols=115 Identities=13% Similarity=0.093 Sum_probs=78.4
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc--
Q psy13944 551 IVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM-- 614 (1217)
Q Consensus 551 V~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~-- 614 (1217)
..++++|+++++ +.++++ ..+|++||+||.... .+.++..+++|+.|+.++.+.+...
T Consensus 50 ~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 123 (248)
T d2d1ya1 50 GAFFQVDLEDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR 123 (248)
T ss_dssp CEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCHH------HHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccc
Confidence 456889999853 444443 368999999996432 2345578999999999999888642
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
.+-.++|++||....... | ....|+.||+..+.++++..
T Consensus 124 ~~~~G~Ii~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~ltk~lA-- 163 (248)
T d2d1ya1 124 KVGGGAIVNVASVQGLFAE----------Q----------------------------ENAAYNASKGGLVNLTRSLA-- 163 (248)
T ss_dssp TTTCEEEEEECCGGGTSBC----------T----------------------------TBHHHHHHHHHHHHHHHHHH--
T ss_pred ccccccccccccccccccc----------c----------------------------ccchhHHHHHHHHHHHHHHH--
Confidence 233589999997643210 0 01259999999999987753
Q ss_pred ccccccc-cCCCceeEeccCccc
Q psy13944 694 ARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 694 a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+++ ..++.+-.+.|-+|-
T Consensus 164 ----~el~~~gIrVN~I~PG~v~ 182 (248)
T d2d1ya1 164 ----LDLAPLRIRVNAVAPGAIA 182 (248)
T ss_dssp ----HHHGGGTEEEEEEEECSBC
T ss_pred ----HHhhhhCcEEEEEeeCCCC
Confidence 233 346777677787663
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.47 E-value=0.0032 Score=66.21 Aligned_cols=197 Identities=12% Similarity=0.038 Sum_probs=119.9
Q ss_pred cccCCCCCCcccHHHHHHHHhcChh-----HHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHH---HhcCCccEEEEc
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADDA-----FDRLRKENANFTERIVVLTADLQSDGLGLDEKEKK---VLREDVNIVFHV 80 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~---~L~~~VDiViH~ 80 (1217)
-+||+.+--|....++|.+...+.+ -+.+.+. .....+.....|+... +..+ .-+..+|+++|+
T Consensus 10 lITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~--~~~~~~~~~~~d~~~~------~~~~~~~~~~~~id~lVn~ 81 (245)
T d2ag5a1 10 ILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL--EKYPGIQTRVLDVTKK------KQIDQFANEVERLDVLFNV 81 (245)
T ss_dssp EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG--GGSTTEEEEECCTTCH------HHHHHHHHHCSCCSEEEEC
T ss_pred EEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH--HhccCCceeeeecccc------ccccccccccccceeEEec
Confidence 3789988899999999988543311 1223221 1234577777887765 3333 334678999999
Q ss_pred CccCCc---c----cCHHHHHHHHHHHHHHHHHHhHhc---CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHh
Q psy13944 81 AATVKF---D----EHFQTAFEINCKGTEKLLKMAEEM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQII 150 (1217)
Q Consensus 81 AA~v~f---~----e~l~~a~~vNV~GT~~LLelAk~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~ 150 (1217)
|+.... . +.++..+++|+.|+..+.+.+... .+--++|++||....- .+.
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---------~~~----------- 141 (245)
T d2ag5a1 82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---------KGV----------- 141 (245)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---------BCC-----------
T ss_pred ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---------CCc-----------
Confidence 998643 1 245688999999999998876531 2334899998854310 000
Q ss_pred hcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccccchhHHHHHH
Q psy13944 151 NSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVA 225 (1217)
Q Consensus 151 ~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~ 225 (1217)
.....|+.+|+.-+.+++..+ .|+.+..+.|+.|-.+.... +......+......
T Consensus 142 -----------------~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~ 201 (245)
T d2ag5a1 142 -----------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARND 201 (245)
T ss_dssp -----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHH
T ss_pred -----------------cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHh---hhhhhhhhHHHHHH
Confidence 011369999999998887654 68999999999776542110 00000111122222
Q ss_pred HhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 226 VGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 226 ~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
+.... ...-+.-.+|+++++..++....
T Consensus 202 ~~~~~---------pl~R~~~pedva~~v~fL~s~~s 229 (245)
T d2ag5a1 202 FLKRQ---------KTGRFATAEEIAMLCVYLASDES 229 (245)
T ss_dssp HHHTC---------TTSSCEEHHHHHHHHHHHHSGGG
T ss_pred HHhcC---------CCCCCcCHHHHHHHHHHHhChhh
Confidence 22210 11125567999999988776544
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=95.46 E-value=0.025 Score=59.19 Aligned_cols=117 Identities=16% Similarity=0.134 Sum_probs=79.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +.+.++ ..+|+++|+|+... + .+.++..+++|+.|+..+.+.+...
T Consensus 52 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 125 (247)
T d2ew8a1 52 RRVLTVKCDVSQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 125 (247)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhH
Confidence 57899999999854 455443 36899999999643 2 2455688999999999998877532
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+-.++|++||...... .| ....|+.||+.-+.+.++..
T Consensus 126 m~~~~~G~Iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~ltk~lA 167 (247)
T d2ew8a1 126 MKRNGWGRIINLTSTTYWLK----------IE----------------------------AYTHYISTKAANIGFTRALA 167 (247)
T ss_dssp HHHHTCEEEEEECCGGGGSC----------CS----------------------------SCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCccccccchhccc----------Cc----------------------------ccccchhhhccHHHHHHHHH
Confidence 13358999999754321 01 11259999999888887643
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+-.+.|-+|-
T Consensus 168 ------~ela~~gIrVN~I~PG~i~ 186 (247)
T d2ew8a1 168 ------SDLGKDGITVNAIAPSLVR 186 (247)
T ss_dssp ------HHHGGGTEEEEEEEECCC-
T ss_pred ------HHhcccCeEEEEEeeCCCC
Confidence 223 345666666776663
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=95.36 E-value=0.024 Score=59.64 Aligned_cols=117 Identities=16% Similarity=0.177 Sum_probs=78.7
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHH-h
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAE-E 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~-~ 613 (1217)
.++.++.+|+++++ ++++++ ..+|+++|+||.... .+.++..+++|+.|+..+.+.+. .
T Consensus 51 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 124 (256)
T d1k2wa_ 51 PAACAIALDVTDQA------SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARA 124 (256)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCHH------HHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccch
Confidence 46889999999854 455543 368999999996432 24455789999999999987643 2
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ .+-.++|++||...... .| ....|+.||+.-+.++++.
T Consensus 125 ~~~~~~~g~Iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~l 166 (256)
T d1k2wa_ 125 MIAGGRGGKIINMASQAGRRG----------EA----------------------------LVGVYCATKAAVISLTQSA 166 (256)
T ss_dssp HHHHTSCEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred hHHhccCCccccccchhhccc----------cc----------------------------cccchhhhhhHHHHHHHHH
Confidence 2 22358999999754321 00 1125999999999999775
Q ss_pred cccccccccccCCCceeEeccCcc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPV 714 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v 714 (1217)
. ++--..++.+-.+.|-+|
T Consensus 167 A-----~el~~~gIrVN~V~PG~i 185 (256)
T d1k2wa_ 167 G-----LNLIRHGINVNAIAPGVV 185 (256)
T ss_dssp H-----HHHGGGTEEEEEEEECCB
T ss_pred H-----HHhcccCeEEEEEecCCC
Confidence 4 122234566666677555
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=95.33 E-value=0.027 Score=59.25 Aligned_cols=117 Identities=13% Similarity=0.054 Sum_probs=80.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++.+|+++++ +++.++ ..+|++||+||... + .+.++..+++|+.|+.++.+.+...
T Consensus 55 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 128 (260)
T d1x1ta1 55 VKVLYDGADLSKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128 (260)
T ss_dssp SCEEEECCCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhh
Confidence 46899999999853 455544 36899999999642 2 2445578999999999988776532
Q ss_pred ---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhc
Q psy13944 615 ---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFW 691 (1217)
Q Consensus 615 ---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~ 691 (1217)
.+--++|.+||...... .| ....|+.||+.-+.++++..
T Consensus 129 m~~~~~G~Iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~lA 170 (260)
T d1x1ta1 129 MKKQGFGRIINIASAHGLVA----------SA----------------------------NKSAYVAAKHGVVGFTKVTA 170 (260)
T ss_dssp HHHHTCEEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCceEeecccccceec----------cC----------------------------CcchhhhhhhhHHHhHHHHH
Confidence 13358999999764321 01 11259999999999987753
Q ss_pred ccccccccc-cCCCceeEeccCccc
Q psy13944 692 GCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 692 ~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+-.+.|-+|.
T Consensus 171 ------~el~~~gIrVN~I~PG~i~ 189 (260)
T d1x1ta1 171 ------LETAGQGITANAICPGWVR 189 (260)
T ss_dssp ------HHHTTTTEEEEEEEECCBC
T ss_pred ------HHhchhCcEEEEEecCCCC
Confidence 233 445666666776663
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=95.14 E-value=0.015 Score=61.31 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=78.4
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh--------cCccEEEEcCcccc-------chhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR--------EDVNIVFHVAATVK-------FDEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~--------~~vdvVfH~AA~v~-------f~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
.++.++.+|+++++ ++++++ ..+|+++|+|+... -.+.++..+++|+.|+..+.+++..
T Consensus 55 ~~~~~~~~D~s~~~------~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~ 128 (258)
T d1ae1a_ 55 LNVEGSVCDLLSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 128 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEeecCCHH------HHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccc
Confidence 45788999999854 343332 24799999999643 2345668899999999999887753
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. ++-.++|++||..+.... | ....|+.||+.-+.+++..
T Consensus 129 ~m~~~~~g~ii~isS~~~~~~~----------~----------------------------~~~~Y~~sK~al~~lt~~l 170 (258)
T d1ae1a_ 129 LLKASQNGNVIFLSSIAGFSAL----------P----------------------------SVSLYSASKGAINQMTKSL 170 (258)
T ss_dssp HHHHHTSEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccc----------c----------------------------cchhHHHHHHHHHHHHHHH
Confidence 2 244589999997653210 1 1125999999999999765
Q ss_pred cccccccccc-cCCCceeEeccCcc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPV 714 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v 714 (1217)
. +.+ ..++.+-.+.|-++
T Consensus 171 A------~el~~~gIrvN~I~PG~i 189 (258)
T d1ae1a_ 171 A------CEWAKDNIRVNSVAPGVI 189 (258)
T ss_dssp H------HHHGGGTEEEEEEEECSB
T ss_pred H------HhcCcCcEEEEEEeeCcc
Confidence 3 233 33566666667555
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=95.13 E-value=0.046 Score=57.59 Aligned_cols=118 Identities=11% Similarity=0.058 Sum_probs=78.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +.++++ ..+|+++|+|+.... .+.++..+++|+.|+..+.+.+..
T Consensus 57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (261)
T d1geea_ 57 GEAIAVKGDVTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130 (261)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhh
Confidence 46889999999854 455443 368999999996432 234557899999999999877653
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ +.-..+|.+||...... .| ..-.|+.||+.-+.++++.
T Consensus 131 m~~~~~g~~Iv~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~l 172 (261)
T d1geea_ 131 FVENDIKGTVINMSSVHEKIP----------WP----------------------------LFVHYAASKGGMKLMTETL 172 (261)
T ss_dssp HHHTTCCCEEEEECCGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccchhccc----------Cc----------------------------cccccccCCccchhhHHHH
Confidence 2 22335888998754321 01 0125999999998888764
Q ss_pred cccccccccccCCCceeEeccCccc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
. ++--..++.+-.+.|-+|-
T Consensus 173 A-----~e~~~~gIrVN~I~PG~v~ 192 (261)
T d1geea_ 173 A-----LEYAPKGIRVNNIGPGAIN 192 (261)
T ss_dssp H-----HHHGGGTCEEEEEEECSBC
T ss_pred H-----HHhhhhCcEEEEEeeCcCc
Confidence 3 1222345777667776663
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=95.12 E-value=0.016 Score=61.58 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=77.0
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccch------------hcHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKFD------------EHFQTAFEINCKGTEKLLK 609 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f~------------~~~~~~~~~NV~GT~nLLe 609 (1217)
.++..+.+|+++++ +.+.++ ..+|+++|+|+...+. +.++..+++|+.|+..+.+
T Consensus 51 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~ 124 (276)
T d1bdba_ 51 DNVLGIVGDVRSLE------DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK 124 (276)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred CCeeEEecccccHH------HHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHH
Confidence 56899999999853 444443 3689999999853211 1356789999999999988
Q ss_pred HHHhc--CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHh
Q psy13944 610 MAEEM--KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIIC 687 (1217)
Q Consensus 610 lA~~~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv 687 (1217)
.+... ++-.++|++||....-. .| ..-.|+.||+.-+.+.
T Consensus 125 ~~~p~m~~~~g~iI~i~S~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt 166 (276)
T d1bdba_ 125 ACLPALVASRGNVIFTISNAGFYP----------NG----------------------------GGPLYTAAKHAIVGLV 166 (276)
T ss_dssp HHHHHHHHHTCEEEEECCGGGTST----------TS----------------------------SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCceeeeechhccC----------CC----------------------------CCchHHHHHHHHHHHH
Confidence 77531 11247888887643211 01 0115999999999988
Q ss_pred hhhcccccccccccCCCceeEeccCcc
Q psy13944 688 LSFWGCARSREKCSHDRGVRVCRNHPV 714 (1217)
Q Consensus 688 ~~y~~~a~~~~~~~~~l~~~i~rp~~v 714 (1217)
++.. ..++..+.+-.+.|-+|
T Consensus 167 r~lA------~ela~~IrVN~I~PG~i 187 (276)
T d1bdba_ 167 RELA------FELAPYVRVNGVGSGGI 187 (276)
T ss_dssp HHHH------HHHTTTCEEEEEEECCC
T ss_pred HHHH------HHhhcceEEcccCCCCE
Confidence 7643 44566666666677666
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.07 E-value=0.019 Score=60.98 Aligned_cols=147 Identities=11% Similarity=0.091 Sum_probs=88.2
Q ss_pred hcccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEE
Q psy13944 510 HRSLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFH 582 (1217)
Q Consensus 510 ~~GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH 582 (1217)
-.|.++++.-|+.+..+.+.+.+.. .. ....++..+.+|+++++ +++.++ ..+|++||
T Consensus 27 ~~Ga~V~l~~r~~~~l~~~~~~l~~--------~~-~~~~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilvn 91 (272)
T d1xkqa_ 27 QEGANVTITGRSSERLEETRQIILK--------SG-VSEKQVNSVVADVTTED------GQDQIINSTLKQFGKIDVLVN 91 (272)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHHHT--------TT-CCGGGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEE
T ss_pred HCCCEEEEEECCHHHHHHHHHHHHh--------cC-CCCCceEEEEccCCCHH------HHHHHHHHHHHHhCCceEEEe
Confidence 3567777776655433332222211 10 11246999999999854 455443 36899999
Q ss_pred cCcccc---c-----hh---cHHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEccc-eeecCcccccccccCCCCChhH
Q psy13944 583 VAATVK---F-----DE---HFQTAFEINCKGTEKLLKMAEEM--KNLDSFIYVSTA-YSNCNIKKIEEKFYEPLYTHIE 648 (1217)
Q Consensus 583 ~AA~v~---f-----~~---~~~~~~~~NV~GT~nLLelA~~~--~~lk~fV~vSTa-~v~g~~~~I~E~~y~~p~~p~~ 648 (1217)
+|+... + +. .++..+++|+.|+.++.+.+... ++-..+|.++|. ..... .|
T Consensus 92 nAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~----------~~----- 156 (272)
T d1xkqa_ 92 NAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA----------QP----- 156 (272)
T ss_dssp CCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC----------CC-----
T ss_pred CCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC----------CC-----
Confidence 998642 1 22 25578899999999998887642 112355555553 22111 00
Q ss_pred HHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccc-cCCCceeEeccCccc
Q psy13944 649 MEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 649 ~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
....|+.||+.-+.+.++.. .++ ..++.+-.+.|-+|.
T Consensus 157 -----------------------~~~~Y~asKaal~~ltk~lA------~el~~~gIrVN~I~PG~i~ 195 (272)
T d1xkqa_ 157 -----------------------DFLYYAIAKAALDQYTRSTA------IDLAKFGIRVNSVSPGMVE 195 (272)
T ss_dssp -----------------------SSHHHHHHHHHHHHHHHHHH------HHHHTTTCEEEEEEECCBC
T ss_pred -----------------------CcchhhhHHHHHHHHHHHHH------HHhcccCeEEEEEeeCCCc
Confidence 01259999999888887643 233 445777777787764
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.03 E-value=0.036 Score=59.12 Aligned_cols=118 Identities=16% Similarity=0.188 Sum_probs=81.4
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHhc-----CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-c
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLRE-----DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M 614 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~~-----~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~-~ 614 (1217)
..++..+.+|+++++ +.+.+.+ .+|+++|+|+.... .+.++..+++|+.|+.++.+.+.. +
T Consensus 56 ~~~~~~~~~Dv~~~~------~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m 129 (285)
T d1jtva_ 56 PGSLETLQLDVRDSK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM 129 (285)
T ss_dssp TTSEEEEECCTTCHH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEeccccchH------hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHH
Confidence 357999999999954 5555542 47999999986432 234557889999999999887753 2
Q ss_pred --CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 --KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 --~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
.+-.++|++||...... .| ....|+.||+.-+.++++..
T Consensus 130 ~~~~~G~Iv~isS~~g~~~----------~~----------------------------~~~~Y~asKaal~~l~~~la- 170 (285)
T d1jtva_ 130 KRRGSGRVLVTGSVGGLMG----------LP----------------------------FNDVYCASKFALEGLCESLA- 170 (285)
T ss_dssp HHHTCEEEEEEEEGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH-
T ss_pred HHcCCCceEEEechhhcCC----------CC----------------------------CchHHHHHHHHHHHHHHHHH-
Confidence 13458999999754321 11 11259999999888887753
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+..+.|-+|.
T Consensus 171 -----~El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 171 -----VLLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp -----HHHGGGTEEEEEEEECCBC
T ss_pred -----HHhhccCcEEEEEecCCCC
Confidence 233 446777777887774
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.01 E-value=0.031 Score=58.23 Aligned_cols=117 Identities=22% Similarity=0.201 Sum_probs=79.2
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-c---C
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M---K 615 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~-~---~ 615 (1217)
++..+.+|+++++ +++++++ .+|+++|+||.... .+.++..+++|+.|+..+.+.+.. + +
T Consensus 51 ~~~~~~~Dv~~~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~ 124 (242)
T d1cyda_ 51 GIEPVCVDLGDWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG 124 (242)
T ss_dssp TCEEEECCTTCHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCHH------HHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhc
Confidence 4778899999854 5666665 57999999996432 234557899999999999887643 1 2
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
.-.++|.+||....... | ....|+.||+.-+.++++..
T Consensus 125 ~~g~ii~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~lt~~lA---- 162 (242)
T d1cyda_ 125 VPGSIVNVSSMVAHVTF----------P----------------------------NLITYSSTKGAMTMLTKAMA---- 162 (242)
T ss_dssp CCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHH----
T ss_pred ccCcccccchhhccccC----------C----------------------------ccccccchHHHHHHHHHHHH----
Confidence 23479999987543220 0 01259999999999997753
Q ss_pred ccccccCCCceeEeccCccc
Q psy13944 696 SREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 696 ~~~~~~~~l~~~i~rp~~v~ 715 (1217)
++--..++.+-.+.|-+|-
T Consensus 163 -~e~~~~gIrvN~I~PG~i~ 181 (242)
T d1cyda_ 163 -MELGPHKIRVNSVNPTVVL 181 (242)
T ss_dssp -HHHGGGTEEEEEEEECCBT
T ss_pred -HHhCccCeecccCCCCCcc
Confidence 1222345666667776663
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.01 E-value=0.017 Score=62.35 Aligned_cols=117 Identities=9% Similarity=0.097 Sum_probs=77.6
Q ss_pred cCcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh
Q psy13944 548 TERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE 613 (1217)
Q Consensus 548 ~~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~ 613 (1217)
..++.++.+|+++++ +++.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+..
T Consensus 65 ~~~~~~~~~Dvs~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~ 138 (297)
T d1yxma1 65 QARVIPIQCNIRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS 138 (297)
T ss_dssp CCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEeccCCCHH------HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHH
Confidence 357999999999864 444443 368999999985431 245567899999999999888763
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
. .+-.++|.+|++...+. | ....|+.||+.-+.++++.
T Consensus 139 ~m~~~~~g~Ii~~ss~~~~~~-----------~----------------------------~~~~Y~asKaal~~ltk~l 179 (297)
T d1yxma1 139 SWMKEHGGSIVNIIVPTKAGF-----------P----------------------------LAVHSGAARAGVYNLTKSL 179 (297)
T ss_dssp HTHHHHCEEEEEECCCCTTCC-----------T----------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccccccccccccc-----------c----------------------------ccccchhHHHHHHHHHHHH
Confidence 2 12346777766432111 0 1125999999988888764
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+-.+.|-+|-
T Consensus 180 A------~el~~~gIrVN~I~PG~i~ 199 (297)
T d1yxma1 180 A------LEWACSGIRINCVAPGVIY 199 (297)
T ss_dssp H------HHTGGGTEEEEEEEECSBC
T ss_pred H------HHhcccCceEEEeeeCcCc
Confidence 3 233 345666666776653
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=94.73 E-value=0.13 Score=54.49 Aligned_cols=198 Identities=13% Similarity=0.066 Sum_probs=116.2
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcChh--------HHHhh-hcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc---
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFADDA--------FDRLR-KENANFTERIVVLTADLQSDGLGLDEKEKKVLR--- 71 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~~v--------fd~Lr-~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~--- 71 (1217)
.|| +=+||+.+.-|....++|.+...+.+ .+.+. +.....-.++..+.+|++++ ++.+.++
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~------~~v~~~~~~~ 97 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP------DMVQNTVSEL 97 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH------HHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccCh------HHHHHHhhhh
Confidence 355 33889988899999999988443211 11111 11122346788999999998 6655433
Q ss_pred ----CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHhH----hcCCCCeEEEEcCcccccccccccccc
Q psy13944 72 ----EDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAE----EMKNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 72 ----~~VDiViH~AA~v~f~-------e~l~~a~~vNV~GT~~LLelAk----~~~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
..+|+++|+|+..... +.....+.+|+.+...+...+. ....-..++.+||.+.....
T Consensus 98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~------- 170 (294)
T d1w6ua_ 98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS------- 170 (294)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-------
T ss_pred hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc-------
Confidence 5689999999975332 1244667788888776654432 22344456666665432110
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcc
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
+....|+.||+.-+.+.+..+ .|+.+..+-|+.|-.+......
T Consensus 171 -------------------------------~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~- 218 (294)
T d1w6ua_ 171 -------------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL- 218 (294)
T ss_dssp -------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C-
T ss_pred -------------------------------cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc-
Confidence 011359999999998887654 6799999999988665321111
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
+.. ........... + ..-+...+|+++++..++...
T Consensus 219 --~~~---~~~~~~~~~~~----p-----l~R~~~pediA~~v~fL~sd~ 254 (294)
T d1w6ua_ 219 --DPT---GTFEKEMIGRI----P-----CGRLGTVEELANLAAFLCSDY 254 (294)
T ss_dssp --CTT---SHHHHHHHTTC----T-----TSSCBCHHHHHHHHHHHTSGG
T ss_pred --CCc---HHHHHHHhhcC----C-----CCCCCCHHHHHHHHHHHhCch
Confidence 100 11122222211 1 112456799999998877543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.72 E-value=0.021 Score=60.66 Aligned_cols=118 Identities=15% Similarity=0.109 Sum_probs=76.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc-----ch----hcHHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK-----FD----EHFQTAFEINCKGTEKLLKMAE 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~-----f~----~~~~~~~~~NV~GT~nLLelA~ 612 (1217)
.++..+.+|+++++ ++++++ ..+|+++|+|+... +. +.++..+++|+.|+..+.+.+.
T Consensus 56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~ 129 (274)
T d1xhla_ 56 EKINAVVADVTEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTK 129 (274)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cceEEEEeeCCCHH------HHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccc
Confidence 57999999999964 444443 36899999998431 11 3355789999999999988776
Q ss_pred hc---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhh
Q psy13944 613 EM---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLS 689 (1217)
Q Consensus 613 ~~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~ 689 (1217)
.. .+-..++.+||...... .| ....|+.||+.-+.++++
T Consensus 130 ~~m~~~~~g~ii~~ss~~~~~~----------~~----------------------------~~~~Y~asKaal~~ltk~ 171 (274)
T d1xhla_ 130 EHLIKTKGEIVNVSSIVAGPQA----------HS----------------------------GYPYYACAKAALDQYTRC 171 (274)
T ss_dssp HHHHHTTCEEEEECCGGGSSSC----------CT----------------------------TSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhhhhcccc----------CC----------------------------CCceehhhhhHHHHHHHH
Confidence 42 23346777776542211 00 001499999998888876
Q ss_pred hcccccccccccCCCceeEeccCccc
Q psy13944 690 FWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 690 y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
.. ++--..++.+-.+.|-+|-
T Consensus 172 lA-----~ela~~gIrVN~I~PG~i~ 192 (274)
T d1xhla_ 172 TA-----IDLIQHGVRVNSVSPGAVA 192 (274)
T ss_dssp HH-----HHHGGGTCEEEEEEECCBC
T ss_pred HH-----HHHhHhCCceeeeccCCCc
Confidence 43 1222345777677777663
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.64 E-value=0.066 Score=55.68 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=81.3
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhc---CccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-c---C
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLRE---DVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-M---K 615 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~---~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~-~---~ 615 (1217)
.+..+.+|++++ ++.+++++ .+|+++|+|+.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 53 ~~~~~~~Dv~d~------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~ 126 (244)
T d1pr9a_ 53 GIEPVCVDLGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG 126 (244)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCH------HHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhC
Confidence 477889999985 35666654 57999999996432 245557899999999998887653 2 2
Q ss_pred CCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccc
Q psy13944 616 NLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCAR 695 (1217)
Q Consensus 616 ~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~ 695 (1217)
+-.++|++||....... | ....|+.||+.-+.++++..
T Consensus 127 ~~g~Ii~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~lt~~lA---- 164 (244)
T d1pr9a_ 127 VPGAIVNVSSQCSQRAV----------T----------------------------NHSVYCSTKGALDMLTKVMA---- 164 (244)
T ss_dssp CCEEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHH----
T ss_pred CcceEeecccccccccc----------c----------------------------chhhhhhhHHHHHHHHHHHH----
Confidence 34589999997643220 0 11259999999999997743
Q ss_pred ccccc-cCCCceeEeccCccchh
Q psy13944 696 SREKC-SHDRGVRVCRNHPVGET 717 (1217)
Q Consensus 696 ~~~~~-~~~l~~~i~rp~~v~e~ 717 (1217)
..+ ..++.+-.+.|-+|--.
T Consensus 165 --~el~~~gIrvN~I~PG~v~T~ 185 (244)
T d1pr9a_ 165 --LELGPHKIRVNAVNPTVVMTS 185 (244)
T ss_dssp --HHHGGGTEEEEEEEECCBCSH
T ss_pred --HHhCCCcEEEEEEeeCcCcCh
Confidence 233 34677777778776433
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.37 E-value=0.014 Score=61.86 Aligned_cols=99 Identities=15% Similarity=0.078 Sum_probs=64.7
Q ss_pred ccccccccccccccccccccccchhhhhhhhcCcCCcCcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcC
Q psy13944 512 SLSKYAIHVPDLTKSRLRDFFADDAFDLLRKENVNFTERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVA 584 (1217)
Q Consensus 512 GirvYlLkr~~stleRarkilk~~vfd~l~~~~~~~~~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~A 584 (1217)
|.++++..|+.+..+.+.+ .++... .++.++.+|+++.+ +.+++. ..+|++||.|
T Consensus 28 g~~Vi~~~r~~~~~~~~~~--------~l~~~~----~~~~~~~~Dvs~~~------sv~~~~~~~~~~~g~iDiLVnNA 89 (275)
T d1wmaa1 28 SGDVVLTARDVTRGQAAVQ--------QLQAEG----LSPRFHQLDIDDLQ------SIRALRDFLRKEYGGLDVLVNNA 89 (275)
T ss_dssp SSEEEEEESSHHHHHHHHH--------HHHHTT----CCCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECC
T ss_pred CCEEEEEECCHHHHHHHHH--------HHHhcC----CcEEEEEEecCCHH------HHHHHHHHHHHhcCCcEEEEEcC
Confidence 6777777776543332222 222222 35788999999854 344332 3689999999
Q ss_pred cccc-------chhcHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEcccee
Q psy13944 585 ATVK-------FDEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYS 628 (1217)
Q Consensus 585 A~v~-------f~~~~~~~~~~NV~GT~nLLelA~~~-~~lk~fV~vSTa~v 628 (1217)
|... ..+.++..+++|+.|+..+.+.+... +.-.++|.+||...
T Consensus 90 Gi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~ 141 (275)
T d1wmaa1 90 GIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS 141 (275)
T ss_dssp CCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred CcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence 9642 23345578899999999999888642 22247999999644
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=94.20 E-value=0.3 Score=50.21 Aligned_cols=190 Identities=16% Similarity=0.064 Sum_probs=112.7
Q ss_pred ccCCCCCCc--ccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 10 HNGAKTCKH--NSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 10 ~tg~r~kkg--~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
+||+.+..| ....++|.+...+ ..-+.+. +......+...+..|+.+. .+..... .
T Consensus 10 ITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 10 VTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE-EFAAQLGSDIVLQCDVAED------ASIDTMFAELGKVWP 82 (258)
T ss_dssp ECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHH-HHHHHTTCCCEEECCTTCH------HHHHHHHHHHHTTCS
T ss_pred EECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHhhcCCcceeecccchH------HHHHHHHHHhhhccc
Confidence 788877544 7788888763221 1112221 1122334567778888876 4433322 3
Q ss_pred CccEEEEcCccCCccc------------CHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCC
Q psy13944 73 DVNIVFHVAATVKFDE------------HFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEP 139 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~e------------~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~ 139 (1217)
..|+++|.|+...... .......+|+.+...+++.+... .+-..+|++||...... .
T Consensus 83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~----------~ 152 (258)
T d1qsga_ 83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------I 152 (258)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------C
T ss_pred ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC----------C
Confidence 5699999998753211 13356778888888888887653 22246788888654111 0
Q ss_pred CCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCccccc
Q psy13944 140 LYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVK 214 (1217)
Q Consensus 140 p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWid 214 (1217)
| ....|+.||+.-+.+.+..+ .++.+..+.|+.|-.+..+..
T Consensus 153 ~----------------------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~----- 199 (258)
T d1qsga_ 153 P----------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI----- 199 (258)
T ss_dssp T----------------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-----
T ss_pred C----------------------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-----
Confidence 0 11469999999998887654 679999999999876643221
Q ss_pred ccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 215 GMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 215 n~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
............. .+ ..-+...+|++++++.++..
T Consensus 200 --~~~~~~~~~~~~~----~p-----l~R~~~peeia~~v~fL~s~ 234 (258)
T d1qsga_ 200 --KDFRKMLAHCEAV----TP-----IRRTVTIEDVGNSAAFLCSD 234 (258)
T ss_dssp --TTHHHHHHHHHHH----ST-----TSSCCCHHHHHHHHHHHTSG
T ss_pred --chhhhHHHHHHhC----CC-----CCCCcCHHHHHHHHHHHhCc
Confidence 1111222221111 11 01256689999998877754
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=93.82 E-value=0.13 Score=53.24 Aligned_cols=116 Identities=16% Similarity=0.124 Sum_probs=74.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++.++++|+++++ +.++++ ..+|++||+|+.... .+.+...+++|+.++..+.+.+...
T Consensus 51 ~~~~~~~~Dls~~~------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~ 124 (241)
T d2a4ka1 51 AEAIAVVADVSDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV 124 (241)
T ss_dssp SSEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccc
Confidence 57889999999854 454443 368999999986431 1334478999999999999887653
Q ss_pred -CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 615 -KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
.+-..++.+||.+..+. | . ...|+.||+.-|.++++..
T Consensus 125 ~~~~~~i~~~ss~a~~~~-----------~----~------------------------~~~Y~~sK~al~~lt~~lA-- 163 (241)
T d2a4ka1 125 LEEGGSLVLTGSVAGLGA-----------F----G------------------------LAHYAAGKLGVVGLARTLA-- 163 (241)
T ss_dssp CCTTCEEEEECCCTTCCH-----------H----H------------------------HHHHHHCSSHHHHHHHHHH--
T ss_pred cccccceeeccccccccc-----------c----C------------------------ccccchhhHHHHHHHHHHH--
Confidence 33345555555432111 0 0 0149999999999987643
Q ss_pred ccccccccCCCceeEeccCcc
Q psy13944 694 ARSREKCSHDRGVRVCRNHPV 714 (1217)
Q Consensus 694 a~~~~~~~~~l~~~i~rp~~v 714 (1217)
++--..++.+-.+.|-+|
T Consensus 164 ---~el~~~gIrvN~I~PG~v 181 (241)
T d2a4ka1 164 ---LELARKGVRVNVLLPGLI 181 (241)
T ss_dssp ---HHHTTTTCEEEEEEECSB
T ss_pred ---HHHhHhCCEEeeeccCcC
Confidence 122234566666667655
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=93.76 E-value=0.089 Score=55.05 Aligned_cols=124 Identities=14% Similarity=0.058 Sum_probs=76.2
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc---c----hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK---F----DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~---f----~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ ++++++ ..+|+++|+|+... + .+.++..+++|+.|+.++.+.+..
T Consensus 59 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 132 (260)
T d1h5qa_ 59 VKTKAYQCDVSNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL 132 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccc
Confidence 46899999999864 455544 35899999998542 1 234557899999999998876643
Q ss_pred c---CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 614 M---KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 614 ~---~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
+ ..-..++.+||........ ...... .....|+.||+.-+.+.++.
T Consensus 133 m~~~~~~g~i~~~~s~~~~~~~~---~~~~~~----------------------------~~~~~Y~asKaal~~lt~~l 181 (260)
T d1h5qa_ 133 WLQKQQKGSIVVTSSMSSQIINQ---SSLNGS----------------------------LTQVFYNSSKAACSNLVKGL 181 (260)
T ss_dssp HHHHTCCEEEEEECCGGGTSCCE---EETTEE----------------------------CSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEEeeccccccccc---cccccC----------------------------ccccchhhhhhhHHHHHHHH
Confidence 1 2334556666654322110 000000 01125999999999888764
Q ss_pred cccccccccccCCCceeEeccCcc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPV 714 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v 714 (1217)
. ++--..++.+-.+.|-+|
T Consensus 182 A-----~el~~~gIrvN~I~PG~i 200 (260)
T d1h5qa_ 182 A-----AEWASAGIRVNALSPGYV 200 (260)
T ss_dssp H-----HHHGGGTEEEEEEEECSB
T ss_pred H-----HHhchhCeEEeecCCCcc
Confidence 3 112234566666677666
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=93.59 E-value=0.079 Score=54.97 Aligned_cols=58 Identities=12% Similarity=0.196 Sum_probs=41.8
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh---------cCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHH
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR---------EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~---------~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA 611 (1217)
.++.++.+|+++++ +++.+. ..+|++||+||... + .+.++..+++|+.|+.++.+.+
T Consensus 51 ~~~~~~~~Dvs~~~------~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 124 (250)
T d1yo6a1 51 SRVHVLPLTVTCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL 124 (250)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred CceEEEEEecCCHH------HHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHH
Confidence 57999999999853 333322 13899999999532 1 1335578999999999988776
Q ss_pred H
Q psy13944 612 E 612 (1217)
Q Consensus 612 ~ 612 (1217)
.
T Consensus 125 ~ 125 (250)
T d1yo6a1 125 L 125 (250)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.45 E-value=0.037 Score=57.36 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=101.9
Q ss_pred cCCCc-ccCCCCCCcccHHHHHHHHhcChhH-H----HhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHh-------c
Q psy13944 5 RGKLG-HNGAKTCKHNSILWVAKDFFADDAF-D----RLRKENANFTERIVVLTADLQSDGLGLDEKEKKVL-------R 71 (1217)
Q Consensus 5 ~g~~g-~tg~r~kkg~~~~eRL~~~l~~~vf-d----~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L-------~ 71 (1217)
+||.- +||+.+.-|....++|.+..-+.+. + .+.+...+...+......|+.+. ++.+.. .
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 77 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSE------KDVQTALALAKGKF 77 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccc------cccccccccccccc
Confidence 57754 8999999999999999985332111 1 11111122345677888888876 333322 2
Q ss_pred CCccEEEEcCccCCc-------------ccCHHHHHHHHHHHHHHHHHHhHhc-------C--CCCeEEEEcCccccccc
Q psy13944 72 EDVNIVFHVAATVKF-------------DEHFQTAFEINCKGTEKLLKMAEEM-------K--NLDSFIYVSTAYSNCNI 129 (1217)
Q Consensus 72 ~~VDiViH~AA~v~f-------------~e~l~~a~~vNV~GT~~LLelAk~~-------~--~lk~fV~vSTa~v~g~~ 129 (1217)
...|.+++.++.... .+.++..+++|+.|+..+.+++... . +--++|++||.+.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~ 157 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 157 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence 346888887665311 1235578999999999999887442 0 11279999998653210
Q ss_pred ccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 130 KKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 130 ~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
| ....|+.||+.-+.+.+..+ .++.+..+-|+.+-.+
T Consensus 158 ----------~----------------------------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~ 199 (248)
T d2o23a1 158 ----------V----------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 199 (248)
T ss_dssp ----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred ----------C----------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecc
Confidence 0 01369999999998887654 6788999999987654
Q ss_pred C
Q psy13944 205 V 205 (1217)
Q Consensus 205 ~ 205 (1217)
.
T Consensus 200 ~ 200 (248)
T d2o23a1 200 L 200 (248)
T ss_dssp -
T ss_pred h
Confidence 3
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=93.41 E-value=0.061 Score=56.05 Aligned_cols=116 Identities=16% Similarity=0.184 Sum_probs=75.8
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCcccc-------c-h---hcHHHHHHHHHHHHHHHHHHH
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVK-------F-D---EHFQTAFEINCKGTEKLLKMA 611 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~-------f-~---~~~~~~~~~NV~GT~nLLelA 611 (1217)
+..++.+|+++++ +.+.++ ..+|+++|+|+... + + +.+...+++|+.|+..+.+.+
T Consensus 59 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 132 (256)
T d1ulua_ 59 GALLFRADVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (256)
T ss_dssp CCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccccccccCCHH------HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHH
Confidence 4678999999853 455543 36899999998531 1 1 234467889999999988877
Q ss_pred Hhc-CCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 612 EEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 612 ~~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
... .+-.++|++||...... . +....|+.||+.-+.++++.
T Consensus 133 ~~~~~~~G~Iv~isS~~~~~~----------~----------------------------~~~~~Y~asKaal~~ltr~l 174 (256)
T d1ulua_ 133 EPLLREGGGIVTLTYYASEKV----------V----------------------------PKYNVMAIAKAALEASVRYL 174 (256)
T ss_dssp TTTEEEEEEEEEEECGGGTSB----------C----------------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEeehHhcCC----------C----------------------------CCchHHHHHHHHHHHHHHHH
Confidence 642 12246899988754321 0 01125999999999998774
Q ss_pred cccccccccc-cCCCceeEeccCccc
Q psy13944 691 WGCARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 691 ~~~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
. ..+ ..++.+-.+.|-+|-
T Consensus 175 A------~ela~~gIrVN~I~PG~i~ 194 (256)
T d1ulua_ 175 A------YELGPKGVRVNAISAGPVR 194 (256)
T ss_dssp H------HHHGGGTCEEEEEEECCC-
T ss_pred H------HHhcccCCEEeeeccceee
Confidence 3 233 345666666676663
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.40 E-value=0.075 Score=54.76 Aligned_cols=179 Identities=10% Similarity=0.001 Sum_probs=106.6
Q ss_pred cccCCCCCCcccHHHHHHHHhcCh-hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHH-------Hhc--CCccEEE
Q psy13944 9 GHNGAKTCKHNSILWVAKDFFADD-AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKK-------VLR--EDVNIVF 78 (1217)
Q Consensus 9 g~tg~r~kkg~~~~eRL~~~l~~~-vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~-------~L~--~~VDiVi 78 (1217)
-+||+.+.-|....++|.+..-+. +.++. + .+.......+..|..+. ++.+ ... .++|++|
T Consensus 6 lITGas~GIG~a~a~~l~~~G~~V~~~~~~--~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~iD~lI 76 (236)
T d1dhra_ 6 LVYGGRGALGSRCVQAFRARNWWVASIDVV--E-NEEASASVIVKMTDSFT------EQADQVTAEVGKLLGDQKVDAIL 76 (236)
T ss_dssp EEETTTSHHHHHHHHHHHTTTCEEEEEESS--C-CTTSSEEEECCCCSCHH------HHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEeCC--c-cccccccceeecccCcH------HHHHHHHHHHHHHhCCCCceEEE
Confidence 378888888888988887743221 12211 1 11122233344444332 2222 122 2489999
Q ss_pred EcCccCC----cc----cCHHHHHHHHHHHHHHHHHHhHh-cCCCCeEEEEcCcccccccccccccccCCCCChHHHHHH
Q psy13944 79 HVAATVK----FD----EHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQI 149 (1217)
Q Consensus 79 H~AA~v~----f~----e~l~~a~~vNV~GT~~LLelAk~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~ 149 (1217)
|+||... +. +.++..+++|+.|+..+.+++.. +++--++|++||....... |
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~----------~--------- 137 (236)
T d1dhra_ 77 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT----------P--------- 137 (236)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------T---------
T ss_pred ECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc----------c---------
Confidence 9998531 12 22446789999999998888754 2333589999997653211 0
Q ss_pred hhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcccccccchhHHH
Q psy13944 150 INSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAM 222 (1217)
Q Consensus 150 ~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~l 222 (1217)
....|+.||+.-+.+.+..+ .++.+..+.|+.|--+.
T Consensus 138 -------------------~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~----------------- 181 (236)
T d1dhra_ 138 -------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM----------------- 181 (236)
T ss_dssp -------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-----------------
T ss_pred -------------------CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc-----------------
Confidence 01369999999999998765 25777778887664431
Q ss_pred HHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHh
Q psy13944 223 YVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWD 260 (1217)
Q Consensus 223 i~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~ 260 (1217)
...... ......+++.+++++.+..++..
T Consensus 182 ~~~~~~---------~~~~~~~~~pe~va~~~~~l~s~ 210 (236)
T d1dhra_ 182 NRKSMP---------EADFSSWTPLEFLVETFHDWITG 210 (236)
T ss_dssp HHHHST---------TSCGGGSEEHHHHHHHHHHHHTT
T ss_pred chhhCc---------cchhhcCCCHHHHHHHHHHHhCC
Confidence 111111 11223478899999998876643
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.37 E-value=0.054 Score=57.05 Aligned_cols=185 Identities=12% Similarity=0.072 Sum_probs=112.8
Q ss_pred cCC-CcccCCCCCCcccHHHHHHHHhcChh-----HHHh---hhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHh----
Q psy13944 5 RGK-LGHNGAKTCKHNSILWVAKDFFADDA-----FDRL---RKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVL---- 70 (1217)
Q Consensus 5 ~g~-~g~tg~r~kkg~~~~eRL~~~l~~~v-----fd~L---r~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L---- 70 (1217)
.|| +-+||+.+.-|....++|.+...+-+ -+++ .++. .....++..+..|+.+. +....+
T Consensus 13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~ 86 (269)
T d1xu9a_ 13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM------TFAEQFVAQA 86 (269)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH------HHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhH------HHHHHHHHHH
Confidence 455 44899999999999999988433211 1222 2221 12345677888898876 443332
Q ss_pred ---cCCccEEEEcCccCCc----cc---CHHHHHHHHHHHHHHHHHHhHh-cC-CCCeEEEEcCcccccccccccccccC
Q psy13944 71 ---REDVNIVFHVAATVKF----DE---HFQTAFEINCKGTEKLLKMAEE-MK-NLDSFIYVSTAYSNCNIKKIEEKFYE 138 (1217)
Q Consensus 71 ---~~~VDiViH~AA~v~f----~e---~l~~a~~vNV~GT~~LLelAk~-~~-~lk~fV~vSTa~v~g~~~~I~E~~y~ 138 (1217)
....|++++.|+.... +. .++..+++|+.|+..+.+.+.. ++ +--++|.+||....-.
T Consensus 87 ~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~---------- 156 (269)
T d1xu9a_ 87 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA---------- 156 (269)
T ss_dssp HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC----------
T ss_pred HHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC----------
Confidence 3467999999987522 12 2447899999999888777643 11 1148899998764221
Q ss_pred CCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-------CCCCEEEEecceeccCCCCCCcc
Q psy13944 139 PLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-------DKLPLGIVRPSIVMPVVEEPCPM 211 (1217)
Q Consensus 139 ~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-------~gLPvvIvRPsiV~G~~~eP~pG 211 (1217)
.| .-..|+.||+..+.+.+..+ .++.+..+.||.|--+
T Consensus 157 ~p----------------------------~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~------- 201 (269)
T d1xu9a_ 157 YP----------------------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE------- 201 (269)
T ss_dssp CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH-------
T ss_pred CC----------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc-------
Confidence 11 01369999999887776543 2466677888755321
Q ss_pred cccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHH
Q psy13944 212 WVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAW 259 (1217)
Q Consensus 212 Widn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~ 259 (1217)
+......+ .......+.+++++.++.+..
T Consensus 202 ----------~~~~~~~~---------~~~~~~~~~e~~a~~i~~~~~ 230 (269)
T d1xu9a_ 202 ----------TAMKAVSG---------IVHMQAAPKEECALEIIKGGA 230 (269)
T ss_dssp ----------HHHHHSCG---------GGGGGCBCHHHHHHHHHHHHH
T ss_pred ----------HHHHhccC---------CccccCCCHHHHHHHHHHHhh
Confidence 11111111 122345678999998887654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=93.13 E-value=0.24 Score=51.89 Aligned_cols=118 Identities=17% Similarity=0.167 Sum_probs=79.9
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE- 613 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~- 613 (1217)
.++.++.+|+++++ +++.++ ..+|+++|.|+.... .+.++..+++|+.|+..+++.+..
T Consensus 68 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 141 (272)
T d1g0oa_ 68 SDAACVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 141 (272)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceeeEeCCCCCHH------HHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence 46899999999854 444443 367999999996432 234557889999999999988874
Q ss_pred cCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccc
Q psy13944 614 MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGC 693 (1217)
Q Consensus 614 ~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~ 693 (1217)
+..-.+.+.++|...... +. .....|+.||+.-+.++++..
T Consensus 142 m~~~g~~i~i~s~~~~~~---------~~----------------------------~~~~~Y~asKaal~~ltk~lA-- 182 (272)
T d1g0oa_ 142 LEIGGRLILMGSITGQAK---------AV----------------------------PKHAVYSGSKGAIETFARCMA-- 182 (272)
T ss_dssp SCTTCEEEEECCGGGTCS---------SC----------------------------SSCHHHHHHHHHHHHHHHHHH--
T ss_pred cccccccccccccccccc---------cc----------------------------cchhhHHHHHHHHHHHHHHHH--
Confidence 333457777776542211 00 111259999999999997753
Q ss_pred ccccccc-cCCCceeEeccCccc
Q psy13944 694 ARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 694 a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
..+ ..++.+-.+.|-+|-
T Consensus 183 ----~e~~~~gIrVN~I~PG~v~ 201 (272)
T d1g0oa_ 183 ----IDMADKKITVNVVAPGGIK 201 (272)
T ss_dssp ----HHHGGGTCEEEEEEECCBS
T ss_pred ----HHhchhCeEEEEEccCCcC
Confidence 233 456777777887764
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=92.49 E-value=0.79 Score=47.43 Aligned_cols=195 Identities=16% Similarity=0.061 Sum_probs=106.9
Q ss_pred ccCCCCCCcccHHHHHHHHhcCh---------hHHHhhhcC-cccCCCeEEEEccCCCCC----------CCCCH-HHHH
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADD---------AFDRLRKEN-ANFTERIVVLTADLQSDG----------LGLDE-KEKK 68 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~---------vfd~Lr~~~-p~~~~kI~~V~GDl~d~~----------LGLs~-edl~ 68 (1217)
+||+...-|....++|.+..-+. ..+.+.++. .........+.+|..... ..++. ++.+
T Consensus 7 ITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~ 86 (284)
T d1e7wa_ 7 VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCA 86 (284)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHH
Confidence 57777777888888887743221 112222221 112344555555533321 00111 4555
Q ss_pred Hhc-------CCccEEEEcCccCCc---cc----C--------------HHHHHHHHHHHHHHHHHHhHhc---------
Q psy13944 69 VLR-------EDVNIVFHVAATVKF---DE----H--------------FQTAFEINCKGTEKLLKMAEEM--------- 111 (1217)
Q Consensus 69 ~L~-------~~VDiViH~AA~v~f---~e----~--------------l~~a~~vNV~GT~~LLelAk~~--------- 111 (1217)
.++ ..+|++||+||.... .+ . +...+.+|+.++..+.+.+.+.
T Consensus 87 ~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 166 (284)
T d1e7wa_ 87 ELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHR 166 (284)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGS
T ss_pred HHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhc
Confidence 543 468999999997521 11 0 1236788999998888775431
Q ss_pred CCCCeEEEEcCcccccccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc---
Q psy13944 112 KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM--- 188 (1217)
Q Consensus 112 ~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~--- 188 (1217)
..--++|.+||....... + ....|+.||+.-+.+.+..+
T Consensus 167 ~~~~~ii~~~s~~~~~~~----------~----------------------------~~~~Y~asKaal~~lt~~lA~el 208 (284)
T d1e7wa_ 167 GTNYSIINMVDAMTNQPL----------L----------------------------GYTIYTMAKGALEGLTRSAALEL 208 (284)
T ss_dssp CSCEEEEEECCTTTTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccccccccCCc----------c----------------------------ceeeeccccccchhhhHHHHHHh
Confidence 122356777766432110 0 01369999999998887654
Q ss_pred --CCCCEEEEecceeccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 189 --DKLPLGIVRPSIVMPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 189 --~gLPvvIvRPsiV~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
.|+.+..+-|+.+-.... . +............ ...-+...+|++++++.++...
T Consensus 209 ~~~gIrvN~I~PG~t~~~~~---------~--~~~~~~~~~~~~p--------l~~R~~~peeiA~~v~fL~S~~ 264 (284)
T d1e7wa_ 209 APLQIRVNGVGPGLSVLVDD---------M--PPAVWEGHRSKVP--------LYQRDSSAAEVSDVVIFLCSSK 264 (284)
T ss_dssp GGGTEEEEEEEESSBCCGGG---------S--CHHHHHHHHTTCT--------TTTSCBCHHHHHHHHHHHHSGG
T ss_pred CCcccccccccccccccccc---------C--CHHHHHHHHhcCC--------CCCCCCCHHHHHHHHHHHhCch
Confidence 678888898885221111 1 1223333332211 0012567899999998777543
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=92.45 E-value=0.13 Score=53.45 Aligned_cols=148 Identities=18% Similarity=0.146 Sum_probs=90.9
Q ss_pred ccCCCCC--CcccHHHHHHHHhcCh---------hHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------
Q psy13944 10 HNGAKTC--KHNSILWVAKDFFADD---------AFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------- 71 (1217)
Q Consensus 10 ~tg~r~k--kg~~~~eRL~~~l~~~---------vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------- 71 (1217)
+||+.+. -|....++|.+...+- .-+.+.+ ....+...+.+|++++ ++...++
T Consensus 11 ItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~---~~~~~~~~~~~dv~~~------~~~~~~~~~v~~~~ 81 (268)
T d2h7ma1 11 VSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---RLPAKAPLLELDVQNE------EHLASLAGRVTEAI 81 (268)
T ss_dssp ECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---TSSSCCCEEECCTTCH------HHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH---HcCCceeeEeeecccc------cccccccchhhhcc
Confidence 7887654 4677788887733321 1222322 3345678899999987 5443332
Q ss_pred ---CCccEEEEcCccCC--------c-ccCHH---HHHHHHHHHHHHHHHHhHhcCCCCeEEEEcCcccccccccccccc
Q psy13944 72 ---EDVNIVFHVAATVK--------F-DEHFQ---TAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAYSNCNIKKIEEKF 136 (1217)
Q Consensus 72 ---~~VDiViH~AA~v~--------f-~e~l~---~a~~vNV~GT~~LLelAk~~~~lk~fV~vSTa~v~g~~~~I~E~~ 136 (1217)
..+|+++|+|+... + +.++. ..+.+|+.+.......+....+-...+.++|......
T Consensus 82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-------- 153 (268)
T d2h7ma1 82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-------- 153 (268)
T ss_dssp CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC--------
T ss_pred ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc--------
Confidence 34699999999642 1 22222 4566777777777777665433234444444322111
Q ss_pred cCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 137 YEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 137 y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.+....|+.+|+..+.+.+..+ .++.+..+.|+.|-.+
T Consensus 154 ------------------------------~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~ 196 (268)
T d2h7ma1 154 ------------------------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 196 (268)
T ss_dssp ------------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred ------------------------------CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence 0122479999999999887654 5799999999977654
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.40 E-value=0.15 Score=52.79 Aligned_cols=120 Identities=14% Similarity=0.098 Sum_probs=75.5
Q ss_pred cEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---CCCcE
Q psy13944 550 RIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDS 619 (1217)
Q Consensus 550 kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~~lk~ 619 (1217)
.+.....|+...+. .+....-...+|+++|+|+.... .+.++..+++|+.|+..+.+.+... .+-.+
T Consensus 51 ~~~~~~~d~~~~~~---~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~ 127 (245)
T d2ag5a1 51 GIQTRVLDVTKKKQ---IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGN 127 (245)
T ss_dssp TEEEEECCTTCHHH---HHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCceeeeecccccc---ccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCce
Confidence 36666777765431 12222233578999999996542 2345578999999999998877641 13348
Q ss_pred EEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccccc
Q psy13944 620 FIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREK 699 (1217)
Q Consensus 620 fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~ 699 (1217)
+|++||....- .+. .....|+.||+.-|.++++.. ++-
T Consensus 128 Ii~isS~~~~~---------~~~----------------------------~~~~~Y~~sKaal~~l~r~lA-----~e~ 165 (245)
T d2ag5a1 128 IINMSSVASSV---------KGV----------------------------VNRCVYSTTKAAVIGLTKSVA-----ADF 165 (245)
T ss_dssp EEEECCSBTTT---------BCC----------------------------TTBHHHHHHHHHHHHHHHHHH-----HHH
T ss_pred eeeeechhhcc---------CCc----------------------------cchhHHHHHHHHHHHHHHHHH-----HHh
Confidence 99998864310 000 011259999999999997754 122
Q ss_pred ccCCCceeEeccCcc
Q psy13944 700 CSHDRGVRVCRNHPV 714 (1217)
Q Consensus 700 ~~~~l~~~i~rp~~v 714 (1217)
-..++.+-.+.|-+|
T Consensus 166 ~~~gIrvN~I~PG~i 180 (245)
T d2ag5a1 166 IQQGIRCNCVCPGTV 180 (245)
T ss_dssp GGGTEEEEEEEESCE
T ss_pred hhhCcEEEEEeecee
Confidence 244577766777666
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=92.03 E-value=0.26 Score=52.95 Aligned_cols=64 Identities=11% Similarity=0.054 Sum_probs=49.1
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEccce
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKFDEHFQTAFEINCKGTEKLLKMAEEMKNLDSFIYVSTAY 627 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f~~~~~~~~~~NV~GT~nLLelA~~~~~lk~fV~vSTa~ 627 (1217)
.+++++.||++++. +.++.+..+++.+|+...... ..|+.++.+++++|++. +++++++.||..
T Consensus 49 ~~v~~~~gD~~d~~-----~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~ 112 (350)
T d1xgka_ 49 PNVTLFQGPLLNNV-----PLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMP 112 (350)
T ss_dssp TTEEEEESCCTTCH-----HHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECC
T ss_pred CCCEEEEeeCCCcH-----HHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeecc
Confidence 46899999999853 446778889999988765322 23677889999999998 677888888764
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=91.94 E-value=0.24 Score=50.80 Aligned_cols=115 Identities=14% Similarity=0.012 Sum_probs=74.5
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhcCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---CCCcEEE
Q psy13944 552 VVLTADLQSDGLGLDEKAKEVLREDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLDSFI 621 (1217)
Q Consensus 552 ~~V~GDltd~~LGLs~~~~~~L~~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~~lk~fV 621 (1217)
+++.+|+++. .+...+-..++|+++|+|+.... .+.++..+++|+.|+..+.+.+... .+-.++|
T Consensus 47 ~~~~~Dv~~~-----~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii 121 (234)
T d1o5ia_ 47 RYVVCDLRKD-----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIV 121 (234)
T ss_dssp EEEECCTTTC-----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cEEEcchHHH-----HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccc
Confidence 4567899874 23333334689999999985321 2345578899999998888776431 1335789
Q ss_pred EEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccc-
Q psy13944 622 YVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKC- 700 (1217)
Q Consensus 622 ~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~- 700 (1217)
.+||....... .....|+.||+.-+.+.++.. +++
T Consensus 122 ~i~S~~~~~~~--------------------------------------~~~~~Y~asKaal~~ltk~lA------~ela 157 (234)
T d1o5ia_ 122 AITSFSVISPI--------------------------------------ENLYTSNSARMALTGFLKTLS------FEVA 157 (234)
T ss_dssp EECCGGGTSCC--------------------------------------TTBHHHHHHHHHHHHHHHHHH------HHHG
T ss_pred ccccccccccc--------------------------------------cccccchhHHHHHHHHHHHHH------HHhc
Confidence 99886543210 011259999999888887754 233
Q ss_pred cCCCceeEeccCccc
Q psy13944 701 SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 701 ~~~l~~~i~rp~~v~ 715 (1217)
..++.+-.+.|-++-
T Consensus 158 ~~gIrVN~I~PG~v~ 172 (234)
T d1o5ia_ 158 PYGITVNCVAPGWTE 172 (234)
T ss_dssp GGTEEEEEEEECSBC
T ss_pred ccCeEEeecccCccc
Confidence 345666667777664
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=91.85 E-value=0.15 Score=52.30 Aligned_cols=100 Identities=14% Similarity=0.001 Sum_probs=63.6
Q ss_pred cCccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEccceeecCcccccccccCCCCC
Q psy13944 575 EDVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYT 645 (1217)
Q Consensus 575 ~~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~ 645 (1217)
..+|++||+||... + .+.++..+++|+.|+..+.+++... ++-.++|++||...... .|
T Consensus 70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~----------~~-- 137 (235)
T d1ooea_ 70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP----------TP-- 137 (235)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC----------CT--
T ss_pred CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC----------cc--
Confidence 35899999998422 1 1334467899999999998888753 22247999998754321 11
Q ss_pred hhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 646 HIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 646 p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
....|+.||+..+.+++++. .+....+.+..+..+.|-.+-
T Consensus 138 --------------------------~~~~Y~asKaal~~l~~~la---~e~~~~~~~i~v~~i~Pg~~~ 178 (235)
T d1ooea_ 138 --------------------------SMIGYGMAKAAVHHLTSSLA---AKDSGLPDNSAVLTIMPVTLD 178 (235)
T ss_dssp --------------------------TBHHHHHHHHHHHHHHHHHH---STTSSCCTTCEEEEEEESCBC
T ss_pred --------------------------cccchHHHHHHHHHHHHHHH---HHhccCCCceEEEEEecCcCc
Confidence 01259999999999998753 211222345555555665553
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=91.52 E-value=0.16 Score=54.79 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=66.7
Q ss_pred cCCccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHhHhc-CCCCeEEEEcCcccccccccccccccCCC
Q psy13944 71 REDVNIVFHVAATVK-----FD----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 71 ~~~VDiViH~AA~v~-----f~----e~l~~a~~vNV~GT~~LLelAk~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 140 (1217)
..++|+++|.||... +. +.+...+++|+.|+..+.+.+... +.-.++|.+||...... .
T Consensus 111 ~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~--------~--- 179 (329)
T d1uh5a_ 111 YGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKV--------V--- 179 (329)
T ss_dssp HCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC--------C---
T ss_pred hCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhccc--------c---
Confidence 357899999998642 22 235578899999999988887653 33347888887543211 0
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc------CCCCEEEEecceecc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM------DKLPLGIVRPSIVMP 203 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~------~gLPvvIvRPsiV~G 203 (1217)
..+...|+.||+.-|.+.+..+ +++.+-.+.|+.|--
T Consensus 180 --------------------------p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 180 --------------------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp --------------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred --------------------------cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 0122469999999998886643 389999999997743
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.42 E-value=0.19 Score=51.64 Aligned_cols=99 Identities=10% Similarity=0.014 Sum_probs=65.9
Q ss_pred CccEEEEcCcccc----c----hhcHHHHHHHHHHHHHHHHHHHHh-cCCCcEEEEEccceeecCcccccccccCCCCCh
Q psy13944 576 DVNIVFHVAATVK----F----DEHFQTAFEINCKGTEKLLKMAEE-MKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 646 (1217)
Q Consensus 576 ~vdvVfH~AA~v~----f----~~~~~~~~~~NV~GT~nLLelA~~-~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p 646 (1217)
.+|++||+||... + .+.++..+++|+.|+.++..++.. +++-.++|++||...... .|
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~----------~~--- 137 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG----------TP--- 137 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC----------CT---
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC----------cc---
Confidence 4899999998421 1 233446789999999999888875 233357999999754321 00
Q ss_pred hHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 647 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 647 ~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
....|+.||+.-+.++++.. .+......++.+..+.|-+|-
T Consensus 138 -------------------------~~~~Y~asKaal~~lt~~la---~El~~~~~gI~vn~v~PG~v~ 178 (236)
T d1dhra_ 138 -------------------------GMIGYGMAKGAVHQLCQSLA---GKNSGMPSGAAAIAVLPVTLD 178 (236)
T ss_dssp -------------------------TBHHHHHHHHHHHHHHHHHT---STTSSCCTTCEEEEEEESCEE
T ss_pred -------------------------CCcccHHHHHHHHHHHHHHH---HHhccCCCcEEEEEEEeccCc
Confidence 01259999999999998753 111112356777777887774
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=91.01 E-value=0.23 Score=51.60 Aligned_cols=117 Identities=18% Similarity=0.181 Sum_probs=77.6
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHHh-------cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVLR-------EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM 614 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L~-------~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~ 614 (1217)
.++..+.+|+++++ +.+.++ ..+|+++|+|+.... .+.++..+++|+.|..++++.+...
T Consensus 56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (259)
T d1ja9a_ 56 AQGVAIQADISKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 129 (259)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEecCCCCCHH------HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence 46899999999853 444433 368999999996431 2344578999999999999888753
Q ss_pred -CCCcEEEEEcccee-ecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcc
Q psy13944 615 -KNLDSFIYVSTAYS-NCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWG 692 (1217)
Q Consensus 615 -~~lk~fV~vSTa~v-~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~ 692 (1217)
++-.+.+.++|... ... .| ....|+.||+.-+.++++..
T Consensus 130 m~~~g~~iii~s~~~~~~~----------~~----------------------------~~~~Y~asK~al~~l~r~lA- 170 (259)
T d1ja9a_ 130 CRRGGRIILTSSIAAVMTG----------IP----------------------------NHALYAGSKAAVEGFCRAFA- 170 (259)
T ss_dssp EEEEEEEEEECCGGGTCCS----------CC----------------------------SCHHHHHHHHHHHHHHHHHH-
T ss_pred hhcCCcccccccccccccC----------CC----------------------------CchhHHHHHHHHHHHHHHHH-
Confidence 22235666655432 211 00 11259999999999998754
Q ss_pred cccccccc-cCCCceeEeccCccc
Q psy13944 693 CARSREKC-SHDRGVRVCRNHPVG 715 (1217)
Q Consensus 693 ~a~~~~~~-~~~l~~~i~rp~~v~ 715 (1217)
+.+ ..++.+-.+.|-++-
T Consensus 171 -----~e~~~~gIrvN~I~PG~i~ 189 (259)
T d1ja9a_ 171 -----VDCGAKGVTVNCIAPGGVK 189 (259)
T ss_dssp -----HHHGGGTCEEEEEEECCBS
T ss_pred -----HHHhhcCeEEeccCcCCcc
Confidence 233 346777777887764
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=89.16 E-value=1.7 Score=44.62 Aligned_cols=192 Identities=13% Similarity=0.025 Sum_probs=102.9
Q ss_pred ccCCCCC--CcccHHHHHHHHhcC--------hhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc-------C
Q psy13944 10 HNGAKTC--KHNSILWVAKDFFAD--------DAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR-------E 72 (1217)
Q Consensus 10 ~tg~r~k--kg~~~~eRL~~~l~~--------~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~-------~ 72 (1217)
+||+.+. -|....++|.+..-+ ...+.+++.. .......++..|++++ ++.+.++ .
T Consensus 10 ITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~-~~~~~~~~~~~d~~~~------~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 10 IVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIA-QELNSPYVYELDVSKE------EHFKSLYNSVKKDLG 82 (274)
T ss_dssp EECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHH-HHTTCCCEEECCTTCH------HHHHHHHHHHHHHTS
T ss_pred EECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hhCCceeEeeecccch------hhHHHHHHHHHHHcC
Confidence 6776553 567777777763221 1222222221 1234456788999887 5555444 5
Q ss_pred CccEEEEcCccCCc--------ccCHHHHHH---HHHHHHHHHHHHhHhcCCCCeEEEEcC-cccccccccccccccCCC
Q psy13944 73 DVNIVFHVAATVKF--------DEHFQTAFE---INCKGTEKLLKMAEEMKNLDSFIYVST-AYSNCNIKKIEEKFYEPL 140 (1217)
Q Consensus 73 ~VDiViH~AA~v~f--------~e~l~~a~~---vNV~GT~~LLelAk~~~~lk~fV~vST-a~v~g~~~~I~E~~y~~p 140 (1217)
.+|+++|+|+.... ......... ++..+...++....+..+-...|.++| ......
T Consensus 83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~------------ 150 (274)
T d2pd4a1 83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY------------ 150 (274)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB------------
T ss_pred CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc------------
Confidence 68999999997422 112222222 233344444444433222234344433 332111
Q ss_pred CChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 141 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 141 ~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
......|+.+|..-+.+.+..+ .|+.+..+.|+.+.-+.....
T Consensus 151 --------------------------~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~------ 198 (274)
T d2pd4a1 151 --------------------------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI------ 198 (274)
T ss_dssp --------------------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS------
T ss_pred --------------------------cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc------
Confidence 1123569999999998876543 679999999997766533211
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
............. ....-+...+|++++++.++....
T Consensus 199 -~~~~~~~~~~~~~---------~p~~r~~~pedIA~~v~fL~S~~s 235 (274)
T d2pd4a1 199 -ADFRMILKWNEIN---------APLRKNVSLEEVGNAGMYLLSSLS 235 (274)
T ss_dssp -TTHHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGGG
T ss_pred -CchHHHHHHHhhh---------hhccCCcCHHHHHHHHHHHhChhh
Confidence 1111111111110 111235789999999888776533
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=89.14 E-value=2 Score=44.60 Aligned_cols=137 Identities=15% Similarity=0.031 Sum_probs=82.5
Q ss_pred CCccEEEEcCccCC-----ccc----CHHHHHHHHHHHHHHHHHHhHhcCC-CCeEEEEcCcccccccccccccccCCCC
Q psy13944 72 EDVNIVFHVAATVK-----FDE----HFQTAFEINCKGTEKLLKMAEEMKN-LDSFIYVSTAYSNCNIKKIEEKFYEPLY 141 (1217)
Q Consensus 72 ~~VDiViH~AA~v~-----f~e----~l~~a~~vNV~GT~~LLelAk~~~~-lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 141 (1217)
..+|+++|.||... +.+ .+...+++|+.++..+.+.+..... -...+.+|+......
T Consensus 118 G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------- 184 (297)
T d1d7oa_ 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI------------- 184 (297)
T ss_dssp SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC-------------
T ss_pred CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccc-------------
Confidence 57899999998632 221 2457899999999999988765311 123445555432111
Q ss_pred ChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHh----c--CCCCEEEEecceeccCCCCCCcccccc
Q psy13944 142 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREK----M--DKLPLGIVRPSIVMPVVEEPCPMWVKG 215 (1217)
Q Consensus 142 dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~----~--~gLPvvIvRPsiV~G~~~eP~pGWidn 215 (1217)
....+..|+.+|+..+.+.+.. + .++.+..+.|+.+-.+....
T Consensus 185 ------------------------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~------- 233 (297)
T d1d7oa_ 185 ------------------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA------- 233 (297)
T ss_dssp ------------------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC-------
T ss_pred ------------------------ccccccceecccccccccccccchhccccceEEecccccccccchhhhh-------
Confidence 0112246999999888776543 2 47999999999887654322
Q ss_pred cchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhh
Q psy13944 216 MNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDV 261 (1217)
Q Consensus 216 ~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~ 261 (1217)
......+........ + ..-+...+|++++++.++...
T Consensus 234 ~~~~~~~~~~~~~~~----P-----lgR~~~peevA~~v~fL~S~~ 270 (297)
T d1d7oa_ 234 IGFIDTMIEYSYNNA----P-----IQKTLTADEVGNAAAFLVSPL 270 (297)
T ss_dssp CSHHHHHHHHHHHHS----S-----SCCCBCHHHHHHHHHHHTSGG
T ss_pred ccCCHHHHHHHHhCC----C-----CCCCCCHHHHHHHHHHHhCch
Confidence 112222332222211 1 112567899999988777543
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=88.18 E-value=0.41 Score=51.52 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=65.1
Q ss_pred cCccEEEEcCcccc-----ch----hcHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEccceeecCcccccccccCCCC
Q psy13944 575 EDVNIVFHVAATVK-----FD----EHFQTAFEINCKGTEKLLKMAEEM-KNLDSFIYVSTAYSNCNIKKIEEKFYEPLY 644 (1217)
Q Consensus 575 ~~vdvVfH~AA~v~-----f~----~~~~~~~~~NV~GT~nLLelA~~~-~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~ 644 (1217)
..+|+++|+||... |. +.+...+++|+.|+..+.+.+... +.-.++|.+||......
T Consensus 112 G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~------------- 178 (329)
T d1uh5a_ 112 GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKV------------- 178 (329)
T ss_dssp CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC-------------
T ss_pred CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhccc-------------
Confidence 57899999998532 22 345578899999999988877653 22347888877543211
Q ss_pred ChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhccccccccccc--CCCceeEeccCcc
Q psy13944 645 THIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCS--HDRGVRVCRNHPV 714 (1217)
Q Consensus 645 ~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~--~~l~~~i~rp~~v 714 (1217)
...+...|+.||+.-|.++++.. ..++ .++.+--+.|-+|
T Consensus 179 ------------------------~p~y~~~y~asKaal~~ltr~lA------~Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 179 ------------------------VPGYGGGMSSAKAALESDTRVLA------YHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp ------------------------CTTCTTTHHHHHHHHHHHHHHHH------HHHHHHHCCEEEEEEECCC
T ss_pred ------------------------ccccchhhhhhhccccccchhhH------HHHhcccCcEEEEEecCcc
Confidence 11122359999999999997754 3444 2677766778776
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.89 E-value=0.17 Score=53.00 Aligned_cols=123 Identities=15% Similarity=0.090 Sum_probs=74.7
Q ss_pred CcEEEEEcccCCCCCC-CCHHHHHHHhcCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHh-cC-CCc
Q psy13944 549 ERIVVLTADLQSDGLG-LDEKAKEVLREDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEE-MK-NLD 618 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LG-Ls~~~~~~L~~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~-~~-~lk 618 (1217)
.++..+..|+++...- .-.+........+|++++.|+.... .+.++..+++|+.|+..+.+.+.. ++ +-.
T Consensus 64 ~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G 143 (269)
T d1xu9a_ 64 ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNG 143 (269)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCC
Confidence 4678888898874310 0001111223468999999985421 234447889999999998887753 11 123
Q ss_pred EEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccc
Q psy13944 619 SFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSRE 698 (1217)
Q Consensus 619 ~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~ 698 (1217)
++|.+||....-. .| .-..|+.||+..+.++++.. .
T Consensus 144 ~ii~isS~~~~~~----------~p----------------------------~~~~Y~asKaal~~~~~~La------~ 179 (269)
T d1xu9a_ 144 SIVVVSSLAGKVA----------YP----------------------------MVAAYSASKFALDGFFSSIR------K 179 (269)
T ss_dssp EEEEEEEGGGTSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH------H
T ss_pred cceEeccchhcCC----------CC----------------------------CchHHHHHHHHHHHHHHHHH------H
Confidence 7899988754221 11 11269999999998887643 2
Q ss_pred ccc---CCCceeEeccCccc
Q psy13944 699 KCS---HDRGVRVCRNHPVG 715 (1217)
Q Consensus 699 ~~~---~~l~~~i~rp~~v~ 715 (1217)
+++ .++.+..+.|-+|.
T Consensus 180 El~~~~~~I~V~~v~PG~v~ 199 (269)
T d1xu9a_ 180 EYSVSRVNVSITLCVLGLID 199 (269)
T ss_dssp HHHHHTCCCEEEEEEECCBC
T ss_pred HhhhcCCCEEEEEEecCcCC
Confidence 232 23445557787775
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.56 E-value=0.6 Score=48.20 Aligned_cols=98 Identities=14% Similarity=0.118 Sum_probs=64.7
Q ss_pred cCccEEEEcCccc-c---ch----hcHHHHHHHHHHHHHHHHHHHHh-c--CCCcEEEEEccceeecCcccccccccCCC
Q psy13944 575 EDVNIVFHVAATV-K---FD----EHFQTAFEINCKGTEKLLKMAEE-M--KNLDSFIYVSTAYSNCNIKKIEEKFYEPL 643 (1217)
Q Consensus 575 ~~vdvVfH~AA~v-~---f~----~~~~~~~~~NV~GT~nLLelA~~-~--~~lk~fV~vSTa~v~g~~~~I~E~~y~~p 643 (1217)
..+|++||+|+.. . +. +.++..+++|+.|+.++.+.+.. + .+--++|++||....... |
T Consensus 70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~----------~ 139 (252)
T d1zmta1 70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----------K 139 (252)
T ss_dssp SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC----------T
T ss_pred CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc----------c
Confidence 4689999999843 1 22 34557889999999999887653 1 133589999997543220 0
Q ss_pred CChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccccccCCCceeEeccCccc
Q psy13944 644 YTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSREKCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 644 ~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~~~~~~l~~~i~rp~~v~ 715 (1217)
....|+.||+.-+.++++.. ++--..++.+-.+.|-+|-
T Consensus 140 ----------------------------~~~~Y~asKaal~~lt~~lA-----~ela~~gIrVN~I~PG~i~ 178 (252)
T d1zmta1 140 ----------------------------ELSTYTSARAGACTLANALS-----KELGEYNIPVFAIGPNYLH 178 (252)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHH-----HHHGGGTCCEEEEEESSBC
T ss_pred ----------------------------cccccccccccHHHHHHHHH-----HHhcccCcEEEEEecCCCc
Confidence 11259999999999987753 1222445677667776663
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.33 E-value=0.55 Score=50.04 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=74.2
Q ss_pred EEEEcccCCCCCCCCHHHHHHHh---cCccEEEEcCccccc-------hhcHHHHHHHHHHHHHHHHHHHHhc---CCCc
Q psy13944 552 VVLTADLQSDGLGLDEKAKEVLR---EDVNIVFHVAATVKF-------DEHFQTAFEINCKGTEKLLKMAEEM---KNLD 618 (1217)
Q Consensus 552 ~~V~GDltd~~LGLs~~~~~~L~---~~vdvVfH~AA~v~f-------~~~~~~~~~~NV~GT~nLLelA~~~---~~lk 618 (1217)
..+..|+++.+- .++.++.+. ..+|++||+||.... .+.++..+++|+.|+.++.+.+... .+--
T Consensus 65 ~~~~~d~~~~~~--~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 142 (302)
T d1gz6a_ 65 GKAVANYDSVEA--GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG 142 (302)
T ss_dssp CEEEEECCCGGG--HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred cccccccchHHH--HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCc
Confidence 345567776531 012233332 368999999996432 2345578999999999998887532 1335
Q ss_pred EEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhhcccccccc
Q psy13944 619 SFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSFWGCARSRE 698 (1217)
Q Consensus 619 ~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y~~~a~~~~ 698 (1217)
++|++||...... .| ..-.|+.||+.-+.++++.. ++
T Consensus 143 ~IV~isS~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~la-----~E 179 (302)
T d1gz6a_ 143 RIIMTASASGIYG----------NF----------------------------GQANYSAAKLGLLGLANTLV-----IE 179 (302)
T ss_dssp EEEEECCHHHHHC----------CT----------------------------TCHHHHHHHHHHHHHHHHHH-----HH
T ss_pred EEEEeCChhhcCC----------CC----------------------------CcHHHHHHHHHHHHHHHHHH-----HH
Confidence 8999999754211 00 01259999999888887643 12
Q ss_pred cccCCCceeEeccCccc
Q psy13944 699 KCSHDRGVRVCRNHPVG 715 (1217)
Q Consensus 699 ~~~~~l~~~i~rp~~v~ 715 (1217)
--..++.+-.+.|..+.
T Consensus 180 ~~~~gIrVN~I~PG~~~ 196 (302)
T d1gz6a_ 180 GRKNNIHCNTIAPNAGS 196 (302)
T ss_dssp TGGGTEEEEEEEEECCS
T ss_pred HhccCCceeeeCCCCCC
Confidence 22445666666676553
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=87.14 E-value=8.7 Score=38.53 Aligned_cols=194 Identities=14% Similarity=0.043 Sum_probs=105.5
Q ss_pred ccCCCCCCcccHHHHHHHHhcC---------hhHHHhhhcC-cccCCCeEEEEccCCCCCCCCCHHHHHHh-------cC
Q psy13944 10 HNGAKTCKHNSILWVAKDFFAD---------DAFDRLRKEN-ANFTERIVVLTADLQSDGLGLDEKEKKVL-------RE 72 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~---------~vfd~Lr~~~-p~~~~kI~~V~GDl~d~~LGLs~edl~~L-------~~ 72 (1217)
+||+.+.-|....++|.+..-+ ...+.+.++. .....+...+..|+.+.. -..+....+ +.
T Consensus 6 VTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g 83 (266)
T d1mxha_ 6 ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSS--SLLDCCEDIIDCSFRAFG 83 (266)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSST--THHHHHHHHHHHHHHHHS
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccch--hHHHHHHHHHHHHHHHhC
Confidence 6788888888888888774321 2222232222 223456777777776541 111222222 24
Q ss_pred CccEEEEcCccCCcc--------------c----CHHHHHHHHHHHHHHHHHHhHhcC--------CCCeEEEEcCcccc
Q psy13944 73 DVNIVFHVAATVKFD--------------E----HFQTAFEINCKGTEKLLKMAEEMK--------NLDSFIYVSTAYSN 126 (1217)
Q Consensus 73 ~VDiViH~AA~v~f~--------------e----~l~~a~~vNV~GT~~LLelAk~~~--------~lk~fV~vSTa~v~ 126 (1217)
.+|+++|+|+..... + ........|+.+.......+.... ....++.+|+....
T Consensus 84 ~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (266)
T d1mxha_ 84 RCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTD 163 (266)
T ss_dssp CCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGG
T ss_pred CCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcccc
Confidence 689999999974211 0 112445567666666555544321 11233344443221
Q ss_pred cccccccccccCCCCChHHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEeccee
Q psy13944 127 CNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIV 201 (1217)
Q Consensus 127 g~~~~I~E~~y~~p~dp~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV 201 (1217)
.. .+....|+.||+.-+.+.+..+ .|+.+..+.|+.+
T Consensus 164 ~~--------------------------------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i 205 (266)
T d1mxha_ 164 LP--------------------------------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLS 205 (266)
T ss_dssp SC--------------------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred cc--------------------------------------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcE
Confidence 10 0112469999999888876654 6789999999987
Q ss_pred ccCCCCCCcccccccchhHHHHHHHhcCceeEEeeCCCceeccccHHHHHHHHHHHHHhhh
Q psy13944 202 MPVVEEPCPMWVKGMNGLTAMYVAVGLGIMRTVYQNTSNIVDMVPGDLVVNILLAAAWDVA 262 (1217)
Q Consensus 202 ~G~~~eP~pGWidn~~g~~~li~~~~~G~l~~i~g~~~~~~D~VpVDdVvnAii~aa~~~~ 262 (1217)
.-+...+ ......+.... + ..+-+...+||+++++.++....
T Consensus 206 ~t~~~~~-----------~~~~~~~~~~~----p----l~r~~~~peeva~~v~fL~s~~s 247 (266)
T d1mxha_ 206 LLPPAMP-----------QETQEEYRRKV----P----LGQSEASAAQIADAIAFLVSKDA 247 (266)
T ss_dssp SCCSSSC-----------HHHHHHHHTTC----T----TTSCCBCHHHHHHHHHHHHSGGG
T ss_pred eccccCC-----------HHHHHHHHhcC----C----CCCCCCCHHHHHHHHHHHhCchh
Confidence 5442211 12222222221 0 00223568999999988876543
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=85.56 E-value=0.26 Score=49.91 Aligned_cols=147 Identities=14% Similarity=0.073 Sum_probs=92.9
Q ss_pred ccCCCCCCcccHHHHHHHHhcChhHHHhhhcCcccCCCeEEEEccCCCCCCCCCHHHHHHhc------CCccEEEEcCcc
Q psy13944 10 HNGAKTCKHNSILWVAKDFFADDAFDRLRKENANFTERIVVLTADLQSDGLGLDEKEKKVLR------EDVNIVFHVAAT 83 (1217)
Q Consensus 10 ~tg~r~kkg~~~~eRL~~~l~~~vfd~Lr~~~p~~~~kI~~V~GDl~d~~LGLs~edl~~L~------~~VDiViH~AA~ 83 (1217)
+||+.+.-|....++|.+...+.+.--.+ ....+...+.+|+++. .....+. ...+.+++.++.
T Consensus 6 ITGas~GIG~aiA~~la~~Ga~V~i~~~~----~~~~~~~~~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (241)
T d1uaya_ 6 VTGGASGLGRAAALALKARGYRVVVLDLR----REGEDLIYVEGDVTRE------EDVRRAVARAQEEAPLFAVVSAAGV 75 (241)
T ss_dssp EETTTSHHHHHHHHHHHHHTCEEEEEESS----CCSSSSEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECC----cccccceEeeccccch------hhhHHHHHhhhccccccchhhhhhc
Confidence 68888888999999998865443221111 1234567788999876 3333222 234555555543
Q ss_pred CC--------c---ccCHHHHHHHHHHHHHHHHHHhHhc---------CCCCeEEEEcCcccccccccccccccCCCCCh
Q psy13944 84 VK--------F---DEHFQTAFEINCKGTEKLLKMAEEM---------KNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTH 143 (1217)
Q Consensus 84 v~--------f---~e~l~~a~~vNV~GT~~LLelAk~~---------~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~dp 143 (1217)
.. . .+.++..+++|+.+...++..+... .+--++|++||.......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~-------------- 141 (241)
T d1uaya_ 76 GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ-------------- 141 (241)
T ss_dssp CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--------------
T ss_pred cccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC--------------
Confidence 21 0 1234577899999988877765432 112379999997653210
Q ss_pred HHHHHHhhcCCcccccccccccCCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEecceeccC
Q psy13944 144 IEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNACEQMVREKM-----DKLPLGIVRPSIVMPV 204 (1217)
Q Consensus 144 ~~~~~~~~~l~d~~~~~~tp~~~~~~PNtYa~SK~~AE~lv~~~~-----~gLPvvIvRPsiV~G~ 204 (1217)
.....|+.||+.-+.+.+..+ .|+.+..+-|+.|-.+
T Consensus 142 ------------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~ 183 (241)
T d1uaya_ 142 ------------------------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 183 (241)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred ------------------------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence 011369999999988876654 6789999999887543
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=81.76 E-value=1.5 Score=45.79 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=71.5
Q ss_pred CcEEEEEcccCCCCCCCCHHHHHHH-------hcCccEEEEcCccccch-------hcHHHHHHHHHHHHHHHHHHHH--
Q psy13944 549 ERIVVLTADLQSDGLGLDEKAKEVL-------REDVNIVFHVAATVKFD-------EHFQTAFEINCKGTEKLLKMAE-- 612 (1217)
Q Consensus 549 ~kV~~V~GDltd~~LGLs~~~~~~L-------~~~vdvVfH~AA~v~f~-------~~~~~~~~~NV~GT~nLLelA~-- 612 (1217)
.++.++.+|+++++ +++.+ ...+|+++|+|+..... +.....+.+|+.+...+...+.
T Consensus 75 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 148 (294)
T d1w6ua_ 75 NKVHAIQCDVRDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ 148 (294)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecccChH------HHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcc
Confidence 56889999999854 33333 24689999999964321 2334567788888777755433
Q ss_pred --hcCCCcEEEEEccceeecCcccccccccCCCCChhHHHHHHhhCCcchhhhhhhhccCCCCChhHHHHHHHHHHhhhh
Q psy13944 613 --EMKNLDSFIYVSTAYSNCNIKKIEEKFYEPLYTHIEMEQIINSCSHTELTVLNDILIKPMPNTYTLSKNAWYIICLSF 690 (1217)
Q Consensus 613 --~~~~lk~fV~vSTa~v~g~~~~I~E~~y~~p~~p~~~~~l~~~~~~~~~~~~~~~l~~~~pNtYt~SK~lAE~lv~~y 690 (1217)
....-..++.+|+.+.... .+....|+.||+.-+.++++.
T Consensus 149 ~~~~~~~~~i~~~ss~~~~~~--------------------------------------~~~~~~YsasKaal~~ltk~l 190 (294)
T d1w6ua_ 149 LIKAQKGAAFLSITTIYAETG--------------------------------------SGFVVPSASAKAGVEAMSKSL 190 (294)
T ss_dssp HHHTTCCEEEEEECCTHHHHC--------------------------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccchhhhc--------------------------------------ccccchHHHHHHHHHHHHHHH
Confidence 2223445666666543211 011125999999999999775
Q ss_pred cccccccccccCCCceeEeccCcc
Q psy13944 691 WGCARSREKCSHDRGVRVCRNHPV 714 (1217)
Q Consensus 691 ~~~a~~~~~~~~~l~~~i~rp~~v 714 (1217)
. ++--..++.+-.+.|-+|
T Consensus 191 A-----~ela~~gIrVN~I~PG~i 209 (294)
T d1w6ua_ 191 A-----AEWGKYGMRFNVIQPGPI 209 (294)
T ss_dssp H-----HHHGGGTEEEEEEEECCB
T ss_pred H-----HHHhHhCeEEEEEccCcc
Confidence 3 222244566666667655
|