Psyllid ID: psy13950


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
MWRDRKGAQETSSIFDLFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDPEMSICLRNKRLSDITAVDIESPRFKTAFGPIIDGNVIPNDPEQCMTVYRDIFNF
ccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHccccccccccccccccccccccccHHHHHHHccccccc
ccccccccccccHHHHHHHHHHHHccccccHHHHcccHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHcccccccccccccccEccccccccHHHHHHHHHHHccc
mwrdrkgaqetSSIFDLFKRAILLSGSALSLWSLVTHPLQYTLQVAqhfncpetdpemsiclrnkrlsditavdiesprfktafgpiidgnvipndpeqcMTVYRDIFNF
mwrdrkgaqetssIFDLFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDPEMSICLRNKRLSDItavdiesprfktafgpiidgnvipndpEQCMTVYRDIFNF
MWRDRKGAQETSSIFDLFKRAIllsgsalslwslVTHPLQYTLQVAQHFNCPETDPEMSICLRNKRLSDITAVDIESPRFKTAFGPIIDGNVIPNDPEQCMTVYRDIFNF
*************IFDLFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDPEMSICLRNKRLSDITAVDIESPRFKTAFGPIIDGNVIPNDPEQCMTVYRDIF**
****************LFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDPEMSICLRNKRLSDITAVDIESPRFKTAFGPIIDGNVIPNDPEQCMTVYR*****
***********SSIFDLFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDPEMSICLRNKRLSDITAVDIESPRFKTAFGPIIDGNVIPNDPEQCMTVYRDIFNF
**********TSSIFDLFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDPEMSICLRNKRLSDITAVDIESPRFKTAFGPIIDGNVIPNDPEQCMTVYRDIFNF
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MWRDRKGAQETSSIFDLFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDPEMSICLRNKRLSDITAVDIESPRFKTAFGPIIDGNVIPNDPEQCMTVYRDIFNF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query110 2.2.26 [Sep-21-2011]
Q8BYM5 825 Neuroligin-3 OS=Mus muscu yes N/A 0.772 0.103 0.465 4e-15
Q62889 848 Neuroligin-3 OS=Rattus no yes N/A 0.772 0.100 0.465 4e-15
Q9NZ94 848 Neuroligin-3 OS=Homo sapi yes N/A 0.772 0.100 0.465 4e-15
Q8N2Q7 840 Neuroligin-1 OS=Homo sapi no N/A 0.872 0.114 0.391 1e-13
Q99K10 843 Neuroligin-1 OS=Mus muscu no N/A 0.872 0.113 0.381 3e-13
Q62765 843 Neuroligin-1 OS=Rattus no no N/A 0.872 0.113 0.381 3e-13
Q8N0W4 816 Neuroligin-4, X-linked OS no N/A 0.772 0.104 0.418 1e-12
Q8NFZ3 816 Neuroligin-4, Y-linked OS no N/A 0.772 0.104 0.406 3e-12
Q9XTG1 798 Neuroligin-1 OS=Caenorhab yes N/A 0.827 0.114 0.355 3e-11
B0F2B4 945 Neuroligin 4-like OS=Mus no N/A 0.772 0.089 0.295 5e-09
>sp|Q8BYM5|NLGN3_MOUSE Neuroligin-3 OS=Mus musculus GN=Nlgn3 PE=1 SV=2 Back     alignment and function desciption
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 17  LFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDP-EMSICLRNKRLSDITAVDI 75
           LF+RAI+ SGSALS W++   P++YT  +A    C   D  +M  CLR K   ++   DI
Sbjct: 283 LFQRAIIQSGSALSSWAVNYQPVKYTSLLADKVGCNVLDTVDMVDCLRQKSAKELVEQDI 342

Query: 76  ESPRFKTAFGPIIDGNVIPNDPEQCM 101
           +  R+  AFGP+IDG+VIP+DPE  M
Sbjct: 343 QPARYHVAFGPVIDGDVIPDDPEILM 368




Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. May play a role in formation or maintenance of synaptic junctions. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system.
Mus musculus (taxid: 10090)
>sp|Q62889|NLGN3_RAT Neuroligin-3 OS=Rattus norvegicus GN=Nlgn3 PE=1 SV=1 Back     alignment and function description
>sp|Q9NZ94|NLGN3_HUMAN Neuroligin-3 OS=Homo sapiens GN=NLGN3 PE=1 SV=2 Back     alignment and function description
>sp|Q8N2Q7|NLGN1_HUMAN Neuroligin-1 OS=Homo sapiens GN=NLGN1 PE=1 SV=2 Back     alignment and function description
>sp|Q99K10|NLGN1_MOUSE Neuroligin-1 OS=Mus musculus GN=Nlgn1 PE=1 SV=2 Back     alignment and function description
>sp|Q62765|NLGN1_RAT Neuroligin-1 OS=Rattus norvegicus GN=Nlgn1 PE=1 SV=1 Back     alignment and function description
>sp|Q8N0W4|NLGNX_HUMAN Neuroligin-4, X-linked OS=Homo sapiens GN=NLGN4X PE=1 SV=1 Back     alignment and function description
>sp|Q8NFZ3|NLGNY_HUMAN Neuroligin-4, Y-linked OS=Homo sapiens GN=NLGN4Y PE=2 SV=1 Back     alignment and function description
>sp|Q9XTG1|NLGN1_CAEEL Neuroligin-1 OS=Caenorhabditis elegans GN=nlg-1 PE=1 SV=1 Back     alignment and function description
>sp|B0F2B4|NLGN4_MOUSE Neuroligin 4-like OS=Mus musculus GN=Nlgn4l PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
242010064 1372 conserved hypothetical protein [Pediculu 0.836 0.067 0.563 4e-25
170041857 1052 neuroligin [Culex quinquefasciatus] gi|1 0.845 0.088 0.589 4e-23
157134466 1252 neuroligin, putative [Aedes aegypti] gi| 0.845 0.074 0.589 4e-23
312384538158 hypothetical protein AND_01984 [Anophele 0.836 0.582 0.583 9e-23
347970144 1381 AGAP003570-PA [Anopheles gambiae str. PE 0.845 0.067 0.546 6e-21
321457858 612 hypothetical protein DAPPUDRAFT_62811 [D 0.845 0.151 0.437 2e-18
91082045 1208 PREDICTED: similar to neuroligin, putati 0.845 0.076 0.5 2e-18
195108293 1416 GI24125 [Drosophila mojavensis] gi|19391 0.845 0.065 0.443 9e-16
195395634 1438 GJ10948 [Drosophila virilis] gi|19414315 0.845 0.064 0.432 4e-15
195445546 1386 GK12017 [Drosophila willistoni] gi|19416 0.845 0.067 0.422 4e-15
>gi|242010064|ref|XP_002425796.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509729|gb|EEB13058.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/94 (56%), Positives = 73/94 (77%), Gaps = 2/94 (2%)

Query: 17  LFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDP--EMSICLRNKRLSDITAVD 74
           LF +AIL+SG+ALS W+L  +PLQ+T+QVA+  NCP  D   E+S CLR KRLSDI +V 
Sbjct: 331 LFHKAILMSGTALSDWALTQNPLQFTIQVAESLNCPLVDENDELSNCLRRKRLSDIMSVK 390

Query: 75  IESPRFKTAFGPIIDGNVIPNDPEQCMTVYRDIF 108
           ++ P F+T FGPI+DG+V+PN P+Q M VY+++F
Sbjct: 391 VDVPEFQTPFGPIVDGSVVPNTPQQVMGVYQNLF 424




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170041857|ref|XP_001848665.1| neuroligin [Culex quinquefasciatus] gi|167865424|gb|EDS28807.1| neuroligin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157134466|ref|XP_001656324.1| neuroligin, putative [Aedes aegypti] gi|108881362|gb|EAT45587.1| AAEL003129-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|312384538|gb|EFR29243.1| hypothetical protein AND_01984 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|347970144|ref|XP_313317.5| AGAP003570-PA [Anopheles gambiae str. PEST] gi|333468798|gb|EAA08899.5| AGAP003570-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|321457858|gb|EFX68936.1| hypothetical protein DAPPUDRAFT_62811 [Daphnia pulex] Back     alignment and taxonomy information
>gi|91082045|ref|XP_971146.1| PREDICTED: similar to neuroligin, putative [Tribolium castaneum] Back     alignment and taxonomy information
>gi|195108293|ref|XP_001998727.1| GI24125 [Drosophila mojavensis] gi|193915321|gb|EDW14188.1| GI24125 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195395634|ref|XP_002056441.1| GJ10948 [Drosophila virilis] gi|194143150|gb|EDW59553.1| GJ10948 [Drosophila virilis] Back     alignment and taxonomy information
>gi|195445546|ref|XP_002070374.1| GK12017 [Drosophila willistoni] gi|194166459|gb|EDW81360.1| GK12017 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
UNIPROTKB|E7EVK0 513 NLGN3 "Neuroligin-3" [Homo sap 0.772 0.165 0.383 6.8e-10
UNIPROTKB|I3LVN7 546 NLGN3 "Uncharacterized protein 0.772 0.155 0.383 7.5e-10
UNIPROTKB|Q08DF0 808 NLGN3 "Uncharacterized protein 0.772 0.105 0.383 1.3e-09
UNIPROTKB|D3DVV1 808 NLGN3 "Neuroligin-3" [Homo sap 0.772 0.105 0.383 1.3e-09
MGI|MGI:2444609 825 Nlgn3 "neuroligin 3" [Mus musc 0.772 0.103 0.383 1.4e-09
UNIPROTKB|D4A2G5 828 Nlgn3 "Neuroligin-3" [Rattus n 0.772 0.102 0.383 1.4e-09
UNIPROTKB|Q9NZ94 848 NLGN3 "Neuroligin-3" [Homo sap 0.772 0.100 0.383 1.4e-09
RGD|621119 848 Nlgn3 "neuroligin 3" [Rattus n 0.772 0.100 0.383 1.4e-09
UNIPROTKB|G3MXP5 879 NLGN3 "Uncharacterized protein 0.772 0.096 0.383 1.5e-09
UNIPROTKB|F1Q3I9 879 NLGN3 "Uncharacterized protein 0.772 0.096 0.383 1.5e-09
UNIPROTKB|E7EVK0 NLGN3 "Neuroligin-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 151 (58.2 bits), Expect = 6.8e-10, P = 6.8e-10
 Identities = 33/86 (38%), Positives = 45/86 (52%)

Query:    17 LFKRAIXXXXXXXXXXXXVTHPLQYTLQVAQHFNCPETDP-EMSICLRNKRLSDITAVDI 75
             LF+RAI               P++YT  +A    C   D  +M  CLR K   ++   DI
Sbjct:   266 LFQRAIIQSGSALSSWAVNYQPVKYTSLLADKVGCNVLDTVDMVDCLRQKSAKELVEQDI 325

Query:    76 ESPRFKTAFGPIIDGNVIPNDPEQCM 101
             +  R+  AFGP+IDG+VIP+DPE  M
Sbjct:   326 QPARYHVAFGPVIDGDVIPDDPEILM 351




GO:0005737 "cytoplasm" evidence=IDA
UNIPROTKB|I3LVN7 NLGN3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q08DF0 NLGN3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|D3DVV1 NLGN3 "Neuroligin-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2444609 Nlgn3 "neuroligin 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|D4A2G5 Nlgn3 "Neuroligin-3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NZ94 NLGN3 "Neuroligin-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|621119 Nlgn3 "neuroligin 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3MXP5 NLGN3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q3I9 NLGN3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
pfam00135 510 pfam00135, COesterase, Carboxylesterase family 4e-19
cd00312 493 cd00312, Esterase_lipase, Esterases and lipases (i 4e-15
COG2272 491 COG2272, PnbA, Carboxylesterase type B [Lipid meta 0.002
>gnl|CDD|215741 pfam00135, COesterase, Carboxylesterase family Back     alignment and domain information
 Score = 80.5 bits (199), Expect = 4e-19
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 16  DLFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDPEMSI--CLRNKRLSDITAV 73
            LF RAIL+SGSALS W++ ++P Q   ++A+   CP  D    +  CLR K   ++   
Sbjct: 207 GLFHRAILMSGSALSPWAITSNPRQRAKRLAKLLGCPGEDSSAELLECLRKKSAEELLDA 266

Query: 74  DIESPRFK--TAFGPIIDGNVIPNDPEQ 99
            +          FGP++DG+ +P DPE+
Sbjct: 267 QLLLLEEVGFFPFGPVVDGDFLPKDPEE 294


Length = 510

>gnl|CDD|238191 cd00312, Esterase_lipase, Esterases and lipases (includes fungal lipases, cholinesterases, etc Back     alignment and domain information
>gnl|CDD|225181 COG2272, PnbA, Carboxylesterase type B [Lipid metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 110
KOG4389|consensus 601 99.9
PF00135 535 COesterase: Carboxylesterase family The prints ent 99.86
cd00312 493 Esterase_lipase Esterases and lipases (includes fu 99.8
COG2272 491 PnbA Carboxylesterase type B [Lipid metabolism] 99.66
KOG1516|consensus 545 99.36
>KOG4389|consensus Back     alignment and domain information
Probab=99.90  E-value=1.4e-23  Score=152.51  Aligned_cols=105  Identities=27%  Similarity=0.463  Sum_probs=92.1

Q ss_pred             CCCCCCCcc------ccCcchhhHHHHHHhcCCCCCcccccc--CHHHHHHHHHHHcCCCCC-hHHHHHHHhcCChHHHH
Q psy13950          1 MWRDRKGAQ------ETSSIFDLFKRAILLSGSALSLWSLVT--HPLQYTLQVAQHFNCPET-DPEMSICLRNKRLSDIT   71 (110)
Q Consensus         1 ~~~~~~ga~------~sp~s~gLF~raI~~SG~~~~~~~~~~--~~~~~~~~~a~~~gc~~~-~~~~l~cLr~~~~~~l~   71 (110)
                      |+|+|+||.      +||.++|||||+|+|||+...+|+...  .+.+++.++++.+||... ..++++|||++|++.|.
T Consensus       222 LFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~pWA~~s~~~A~~~s~~La~lvgC~~~~~~~i~~ClR~~~a~~l~  301 (601)
T KOG4389|consen  222 LFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNPWAIVSPGEARQRSTALANLVGCNKTNDTEIVACLRSVPAQLLS  301 (601)
T ss_pred             EeccccchhhhhheecCCCchhhHHHHHhhcCCCCCCccccChHHHHHHHHHHHHHhCCCCCChHHHHHHHhcCCHHHHh
Confidence            689999987      589999999999999999999999753  468899999999999876 77899999999999999


Q ss_pred             hhhhcCC--CCCCcceecccCCCCCcCHHHHHHhhc
Q psy13950         72 AVDIESP--RFKTAFGPIIDGNVIPNDPEQCMTVYR  105 (110)
Q Consensus        72 ~a~~~~~--~~~~~f~PvvDg~~lp~~P~~~~~~g~  105 (110)
                      ...-.+.  ...++|+||+|++||+++|..++++|+
T Consensus       302 ~~~wnv~~~~l~FpfvpvvDg~Fl~~~~~~~L~~g~  337 (601)
T KOG4389|consen  302 LNEWNVSPTPLSFPFVPVVDGDFLSDDPFALLKEGD  337 (601)
T ss_pred             hhhccccCCccccceeeeeccccccCChHHHHhcCC
Confidence            7665542  345789999999999999999998875



>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases Back     alignment and domain information
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc Back     alignment and domain information
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism] Back     alignment and domain information
>KOG1516|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
3b3q_A 577 Crystal Structure Of A Synaptic Adhesion Complex Le 4e-09
3biw_A 574 Crystal Structure Of The Neuroligin-1NEUREXIN-1beta 5e-09
3vkf_A 585 Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COM 5e-09
3be8_A 588 Crystal Structure Of The Synaptic Protein Neuroligi 1e-08
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex Length = 577 Back     alignment and structure

Iteration: 1

Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Query: 17 LFKRAIXXXXXXXXXXXXVTHPLQYTLQVAQHFNCPETDP-EMSICLRNKRLSDITAVDI 75 LF+RAI P +Y +A C +D E+ CL+ K ++ D+ Sbjct: 250 LFQRAIAQSGTALSSWAVSFQPAKYARILATKVGCQVSDTVELVECLQKKPYKELVDQDV 309 Query: 76 ESPRFKTAFGPIIDGNVIPNDPEQCM 101 + R+ AFGP+IDG+VIP+DP+ M Sbjct: 310 QPARYHIAFGPVIDGDVIPDDPQILM 335
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta Synaptic Adhesion Complex Length = 574 Back     alignment and structure
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX Length = 585 Back     alignment and structure
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4 Length = 588 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
3bix_A 574 Neuroligin-1, neuroligin I; esterase domain, alpha 2e-25
2bce_A 579 Cholesterol esterase; hydrolase, serine esterase, 3e-21
1ea5_A 537 ACHE, acetylcholinesterase; hydrolase, serine hydr 4e-21
1p0i_A 529 Cholinesterase; serine hydrolase, butyrate, hydrol 2e-20
2ha2_A 543 ACHE, acetylcholinesterase; hydrolase fold, serine 2e-19
1dx4_A 585 ACHE, acetylcholinesterase; hydrolase, serine este 2e-19
2h7c_A 542 Liver carboxylesterase 1; enzyme, cholesteryl este 1e-17
2fj0_A 551 JuvenIle hormone esterase; manduca sexta, alpha-be 2e-15
2ogt_A 498 Thermostable carboxylesterase EST50; alpha/beta hy 1e-14
1ukc_A 522 ESTA, esterase; fungi, A/B hydrolase fold, acetylc 3e-13
1thg_A 544 Lipase; hydrolase(carboxylic esterase); HET: NAG N 5e-13
1llf_A 534 Lipase 3; candida cylindracea cholesterol esterase 5e-13
1qe3_A 489 PNB esterase, para-nitrobenzyl esterase; alpha-bet 7e-13
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* Length = 574 Back     alignment and structure
 Score = 97.9 bits (244), Expect = 2e-25
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 13  SIFDLFKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDP-EMSICLRNKRLSDIT 71
           S   LF+RAI  SG+ALS W++   P +Y   +A    C  +D  E+  CL+ K   ++ 
Sbjct: 234 SEKGLFQRAIAQSGTALSSWAVSFQPAKYARILATKVGCNVSDTVELVECLQKKPYKELV 293

Query: 72  AVDIESPRFKTAFGPIIDGNVIPNDPEQ 99
             D++  R+  AFGP+IDG+VIP+DP+ 
Sbjct: 294 DQDVQPARYHIAFGPVIDGDVIPDDPQI 321


>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A Length = 579 Back     alignment and structure
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... Length = 537 Back     alignment and structure
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... Length = 529 Back     alignment and structure
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... Length = 543 Back     alignment and structure
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* Length = 585 Back     alignment and structure
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* Length = 542 Back     alignment and structure
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} Length = 551 Back     alignment and structure
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A Length = 498 Back     alignment and structure
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 Length = 522 Back     alignment and structure
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 Length = 544 Back     alignment and structure
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* Length = 534 Back     alignment and structure
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A Length = 489 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query110
1ea5_A 537 ACHE, acetylcholinesterase; hydrolase, serine hydr 99.77
2bce_A 579 Cholesterol esterase; hydrolase, serine esterase, 99.77
1p0i_A 529 Cholinesterase; serine hydrolase, butyrate, hydrol 99.77
2ha2_A 543 ACHE, acetylcholinesterase; hydrolase fold, serine 99.75
2h7c_A 542 Liver carboxylesterase 1; enzyme, cholesteryl este 99.74
2fj0_A 551 JuvenIle hormone esterase; manduca sexta, alpha-be 99.71
3bix_A 574 Neuroligin-1, neuroligin I; esterase domain, alpha 99.7
1dx4_A 585 ACHE, acetylcholinesterase; hydrolase, serine este 99.7
2ogt_A 498 Thermostable carboxylesterase EST50; alpha/beta hy 99.68
1llf_A 534 Lipase 3; candida cylindracea cholesterol esterase 99.62
1thg_A 544 Lipase; hydrolase(carboxylic esterase); HET: NAG N 99.55
1ukc_A 522 ESTA, esterase; fungi, A/B hydrolase fold, acetylc 99.51
1qe3_A 489 PNB esterase, para-nitrobenzyl esterase; alpha-bet 99.45
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... Back     alignment and structure
Probab=99.77  E-value=8e-20  Score=135.78  Aligned_cols=105  Identities=29%  Similarity=0.540  Sum_probs=88.4

Q ss_pred             CCCCCCCccc------cCcchhhHHHHHHhcCCCCCccccc--cCHHHHHHHHHHHcCCCCC-hHHHHHHHhcCChHHHH
Q psy13950          1 MWRDRKGAQE------TSSIFDLFKRAILLSGSALSLWSLV--THPLQYTLQVAQHFNCPET-DPEMSICLRNKRLSDIT   71 (110)
Q Consensus         1 ~~~~~~ga~~------sp~s~gLF~raI~~SG~~~~~~~~~--~~~~~~~~~~a~~~gc~~~-~~~~l~cLr~~~~~~l~   71 (110)
                      +||+|+|+.+      +|.+++||+++|+|||+...+|...  .+++..++++++.+||+.. ..+.++|||++++++|+
T Consensus       196 l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~~~~~~~~~~~~~~a~~lgc~~~~~~~~~~cLr~~~~~~l~  275 (537)
T 1ea5_A          196 IFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIHCLREKKPQELI  275 (537)
T ss_dssp             EEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTTCTTSCBCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHSCHHHHH
T ss_pred             EEecccHHHHHHHHHhCccchhhhhhheeccCCccCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhhCCHHHHH
Confidence            5799999874      6888999999999999988887652  3467888999999999865 67789999999999999


Q ss_pred             hhhhcCC----CCCCcceecccCCCCCcCHHHHHHhhc
Q psy13950         72 AVDIESP----RFKTAFGPIIDGNVIPNDPEQCMTVYR  105 (110)
Q Consensus        72 ~a~~~~~----~~~~~f~PvvDg~~lp~~P~~~~~~g~  105 (110)
                      ++.....    ...+.|.||+||.+||++|.+++++|.
T Consensus       276 ~a~~~~~~~~~~~~~~f~PvvDg~~lp~~p~~~~~~g~  313 (537)
T 1ea5_A          276 DVEWNVLPFDSIFRFSFVPVIDGEFFPTSLESMLNSGN  313 (537)
T ss_dssp             HHGGGGCSSSCSSCCSSCCBCCSSSSSSCHHHHHHHTC
T ss_pred             HHHhhhccccccccccceeeECcccCCcCHHHHHhcCC
Confidence            9876532    123579999999999999999999875



>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A Back     alignment and structure
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... Back     alignment and structure
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... Back     alignment and structure
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* Back     alignment and structure
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} Back     alignment and structure
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* Back     alignment and structure
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* Back     alignment and structure
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A Back     alignment and structure
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* Back     alignment and structure
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 Back     alignment and structure
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 Back     alignment and structure
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 110
d2bcea_ 579 c.69.1.1 (A:) Bile-salt activated lipase (choleste 5e-05
d1p0ia_ 526 c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo 0.002
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} Length = 579 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetylcholinesterase-like
domain: Bile-salt activated lipase (cholesterol esterase)
species: Cow (Bos taurus) [TaxId: 9913]
 Score = 38.5 bits (88), Expect = 5e-05
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 8/101 (7%)

Query: 18  FKRAILLSGSALSLWSLVTHPLQYTLQVAQHFNCPETDP-EMSICLRNKRLSDITAV--- 73
            KRAI  SG  L  W++   PL +  ++A+   CP  D  +M+ CL+      +T     
Sbjct: 213 IKRAISQSGVGLCPWAIQQDPLFWAKRIAEKVGCPVDDTSKMAGCLKITDPRALTLAYKL 272

Query: 74  ----DIESPRFKTAFGPIIDGNVIPNDPEQCMTVYRDIFNF 110
                        +F P+IDG+ IP+DP        D+   
Sbjct: 273 PLGSTEYPKLHYLSFVPVIDGDFIPDDPVNLYANAADVDYI 313


>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} Length = 526 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query110
d1llfa_ 534 Type-B carboxylesterase/lipase {Candida cylindrace 99.84
d1p0ia_ 526 Butyryl cholinesterase {Human (Homo sapiens) [TaxI 99.83
d2bcea_ 579 Bile-salt activated lipase (cholesterol esterase) 99.82
d1thga_ 544 Type-B carboxylesterase/lipase {Fungus (Geotrichum 99.82
d1ea5a_ 532 Acetylcholinesterase {Pacific electric ray (Torped 99.82
d2ha2a1 542 Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 99.81
d2h7ca1 532 Mammalian carboxylesterase (liver carboxylesterase 99.81
d1dx4a_ 571 Acetylcholinesterase {Fruit fly (Drosophila melano 99.77
d1ukca_ 517 Esterase EstA {Aspergillus niger [TaxId: 5061]} 99.77
d1qe3a_ 483 Thermophilic para-nitrobenzyl esterase (PNB estera 99.71
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Type-B carboxylesterase/lipase
species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=99.84  E-value=1.4e-22  Score=147.93  Aligned_cols=104  Identities=16%  Similarity=0.216  Sum_probs=87.1

Q ss_pred             CCCCCCCcc-----c-------cCcchhhHHHHHHhcCCCCCcccccc-CHHHHHHHHHHHcCCCCChHHHHHHHhcCCh
Q psy13950          1 MWRDRKGAQ-----E-------TSSIFDLFKRAILLSGSALSLWSLVT-HPLQYTLQVAQHFNCPETDPEMSICLRNKRL   67 (110)
Q Consensus         1 ~~~~~~ga~-----~-------sp~s~gLF~raI~~SG~~~~~~~~~~-~~~~~~~~~a~~~gc~~~~~~~l~cLr~~~~   67 (110)
                      |||||+||.     +       ||.++|||||||+|||+.+..+.... ..++.++++++.+||++. .+.++|||++++
T Consensus       205 l~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~~~~~~~~~~~~~~~~~~la~~lGc~~~-~~~l~cLR~~~a  283 (534)
T d1llfa_         205 IFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGTYGNEIYDLFVSSAGCGSA-SDKLACLRSASS  283 (534)
T ss_dssp             EEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCSCCCCCTTSHHHHHHHHHHHHHTTCTTC-SSHHHHHHHSCH
T ss_pred             eeeecchHHHHHHHHhccccccccchhhhhhhhhhccCccccCcccchhhhhhhhhHHHhhhcccCc-ccccccccCCCH
Confidence            589999976     2       79999999999999999877776543 357788999999999763 456999999999


Q ss_pred             HHHHhhhhcCC------CCCCcceecccCCCCCcCHHHHHHhhc
Q psy13950         68 SDITAVDIESP------RFKTAFGPIIDGNVIPNDPEQCMTVYR  105 (110)
Q Consensus        68 ~~l~~a~~~~~------~~~~~f~PvvDg~~lp~~P~~~~~~g~  105 (110)
                      ++|+++.....      .....|.||+||.+||++|.+++++|.
T Consensus       284 ~~L~~a~~~~~~~~~~~~~~~~f~PviDG~~lp~~p~~~l~~g~  327 (534)
T d1llfa_         284 DTLLDATNNTPGFLAYSSLRLSYLPRPDGKNITDDMYKLVRDGK  327 (534)
T ss_dssp             HHHHHHHHTSCCTTSTTTTSCSSCCCCCSSSSCSCHHHHHHTTC
T ss_pred             HHHHHHHHhcccccccccccceeecccccccCCCChhhHhhcCC
Confidence            99999887642      234579999999999999999999875



>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} Back     information, alignment and structure
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} Back     information, alignment and structure
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure