Psyllid ID: psy13989

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIRAG
Secondary Structure (PSIPRED)
cccccEEEEcccccHHHcccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEHccHHHHccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELllkapflpgesdlDQLTRIFQtlgtpsedtwptagvKGLFSLIRAG
Flexible Loop (DISEMBL)
MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTlgtpsedtwptagvkGLFSLIRAG
Low Complexity Region (SEG)
MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIRAG
Disordered region (IsUnstruct)
******VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI***
Disordered Region (DISOPRED)
MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI***
Disordered Region (DISEMBL)
MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIRAG
Disordered Region (DISPRO)
MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIRAG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
Q03147	346	Cyclin-dependent kinase 7	yes	N/A	0.764	0.187	0.769	1e-25
P50613	346	Cyclin-dependent kinase 7	yes	N/A	0.764	0.187	0.769	1e-25
P51952	329	Cyclin-dependent kinase 7	yes	N/A	0.811	0.209	0.712	1e-25
P20911	352	Cyclin-dependent kinase 7	N/A	N/A	0.764	0.184	0.753	2e-25
P51953	344	Cyclin-dependent kinase 7	N/A	N/A	0.764	0.188	0.723	8e-23
Q9LMT0	391	Cyclin-dependent kinase D	yes	N/A	0.717	0.156	0.606	8e-19
P24788	784	Cyclin-dependent kinase 1	no	N/A	0.717	0.077	0.573	4e-18
Q9C9U2	398	Cyclin-dependent kinase D	no	N/A	0.717	0.153	0.590	8e-18
P54685	360	Cyclin-dependent kinase 7	yes	N/A	0.835	0.197	0.506	1e-17
Q12126	335	Serine/threonine-protein	yes	N/A	0.870	0.220	0.439	1e-17

>sp|Q03147|CDK7_MOUSE Cyclin-dependent kinase 7 OS=Mus musculus GN=Cdk7 PE=1 SV=2

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233

Query: 67  EDTWP 71
           E+ WP
Sbjct: 234 EEQWP 238

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 3

>sp|P50613|CDK7_HUMAN Cyclin-dependent kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233

Query: 67  EDTWP 71
           E+ WP
Sbjct: 234 EEQWP 238

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P51952|CDK7_RAT Cyclin-dependent kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7 PE=2 SV=2

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 4/73 (5%)

Query: 3   NW----KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
           NW    + V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRI
Sbjct: 158 NWAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI 217

Query: 59  FQTLGTPSEDTWP 71
           F+TLGTP+E+ WP
Sbjct: 218 FETLGTPTEEQWP 230

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P20911|CDK7_XENLA Cyclin-dependent kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/65 (75%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + +PELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 180 VTRWYRSPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 239

Query: 67  EDTWP 71
           E+ WP
Sbjct: 240 EEQWP 244

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of cdk1/cyclin-B during G2-M transition, and for activation of cdk2/cyclins during G1-S transition (but not complex formation). cdk7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. CAK activates the cyclin-associated kinases cdk1, cdk2, cdk4 and cdk6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (polr2a), allowing its escape from the promoter and elongation of the transcripts (By similarity). Involved in negative regulation of the meiotic maturation of Xenopus oocytes.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P51953|CDK7_CARAU Cyclin-dependent kinase 7 OS=Carassius auratus GN=cdk7 PE=2 SV=1

 Score =  105 bits (262), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/65 (72%), Positives = 56/65 (86%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVG I+ ELLL+ PFL G+SDLDQLT IF+ LGTP+
Sbjct: 173 VTRWYRAPELLFGARMYGVGVDMWAVGSILAELLLRVPFLAGDSDLDQLTGIFEALGTPT 232

Query: 67  EDTWP 71
           E+TWP
Sbjct: 233 EETWP 237

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of cdk1/cyclin-B during G2-M transition, and for activation of cdk2/cyclins during G1-S transition (but not complex formation). cdk7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. CAK activates the cyclin-associated kinases cdk1, cdk2, cdk4 and cdk6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (polr2a), allowing its escape from the promoter and elongation of the transcripts.

Carassius auratus (taxid: 7957)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9LMT0|CDKD3_ARATH Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3 PE=1 SV=1

 Score = 92.4 bits (228), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/61 (60%), Positives = 45/61 (73%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APELLFGA+ YG  +D+WAV CI  ELLL+ PFL G SD+DQL++IF   GTP  D W
Sbjct: 175 YRAPELLFGAKQYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQW 234

Query: 71  P 71
           P
Sbjct: 235 P 235

May form a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P24788|CD11B_MOUSE Cyclin-dependent kinase 11B OS=Mus musculus GN=Cdk11b PE=1 SV=2

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 45/61 (73%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APELL GA+ Y   +DMW+VGCI  ELL + P  PG+SD+DQ+ +IF+ LGTPSE  W
Sbjct: 592 YRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDLGTPSEKIW 651

Query: 71  P 71
           P
Sbjct: 652 P 652

Acts as a negative regulator of the normal cell cycle progression. In vitro, this protein kinase has been shown to phosphorylate a number of substrates, including histone h1, casein, and galactosyltransferase. May function in regulating proliferation by the phosphorylation and subsequent plasma membrane targeting of galactosyltransferase.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q9C9U2|CDKD1_ARATH Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/61 (59%), Positives = 44/61 (72%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APELLFGA+ Y   +D+WA GCI  ELLL+ PFL G SD+DQL++IF   GTP  D W
Sbjct: 174 YRAPELLFGAKQYDGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQW 233

Query: 71  P 71
           P
Sbjct: 234 P 234

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P54685|CDK7_DICDI Cyclin-dependent kinase 7 OS=Dictyostelium discoideum GN=cdk7 PE=2 SV=2

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 2/73 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APELLFGA+ YG  +D+W++GCI  EL+L+ P+LPG  ++DQL +I   LGTP+E  W
Sbjct: 171 YRAPELLFGAKSYGPSVDIWSIGCIFAELMLRTPYLPGTGEIDQLRKICSALGTPNESNW 230

Query: 71  PTAGVKGLFSLIR 83
           P  GV  L + I+
Sbjct: 231 P--GVTCLPNYIK 241

Catalytic part of CAK which activates cyclin-associated CDK1/CDK2/CDK4 by threonine phosphorylation, thereby allowing MPF activation.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q12126|CRK1_SCHPO Serine/threonine-protein kinase crk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=crk1 PE=1 SV=1

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 17/91 (18%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           + + +  PEL  G R YG G+DMW+VGCI  EL+L+ P+LPGESDLDQL  IF+ LGTP 
Sbjct: 169 ITRWYRPPELFMGCRSYGTGVDMWSVGCIFAELMLRTPYLPGESDLDQLNVIFRALGTPE 228

Query: 67  EDTW-----------------PTAGVKGLFS 80
            +                   P  G++ LFS
Sbjct: 229 PEVIKSMQQLPNYVEMKHIPPPNGGMEALFS 259

Protein kinase essential for cell proliferation, where it is required for completion of cytokinesis. Phosphorylates the C-terminal repeat domain (CTD) of RNA polymerase II.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
395510426	328	PREDICTED: cyclin-dependent kinase 7 [Sa	0.764	0.198	0.769	7e-26
110757430	321	PREDICTED: cyclin-dependent kinase 7 [Ap	0.764	0.202	0.784	1e-25
327263175	343	PREDICTED: cyclin-dependent kinase 7-lik	0.764	0.189	0.769	1e-25
444513346	276	Cyclin-dependent kinase 7 [Tupaia chinen	0.764	0.235	0.769	2e-25
449278692	304	Cell division protein kinase 7, partial	0.823	0.230	0.736	2e-25
395048	346	protein kinase [Mus musculus]	0.764	0.187	0.769	2e-25
619509	312	CdK-activating kinase Cdk7 [Rattus norve	0.811	0.221	0.712	3e-25
149584761	324	PREDICTED: cyclin-dependent kinase 7-lik	0.764	0.200	0.769	3e-25
62857669	352	cyclin-dependent kinase 7 [Xenopus (Silu	0.764	0.184	0.753	4e-25
307189191	278	Cell division protein kinase 7 [Camponot	0.764	0.233	0.769	6e-25

>gi|395510426|ref|XP_003759476.1| PREDICTED: cyclin-dependent kinase 7 [Sarcophilus harrisii]

 Score =  121 bits (303), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233

Query: 67  EDTWP 71
           E+ WP
Sbjct: 234 EEQWP 238

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|110757430|ref|XP_395800.3| PREDICTED: cyclin-dependent kinase 7 [Apis mellifera]

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/65 (78%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELL+GAR+YG GIDMWAVGCI+ ELLL+ PFLPGESDLDQLTRIFQTLGTP+
Sbjct: 153 VTRWYRAPELLYGARLYGTGIDMWAVGCILAELLLRVPFLPGESDLDQLTRIFQTLGTPT 212

Query: 67  EDTWP 71
           E+TWP
Sbjct: 213 EETWP 217

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|327263175|ref|XP_003216396.1| PREDICTED: cyclin-dependent kinase 7-like [Anolis carolinensis]

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/65 (76%), Positives = 60/65 (92%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+APFLPG+SDLDQLT+IF+TLGTP+
Sbjct: 172 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRAPFLPGDSDLDQLTKIFETLGTPT 231

Query: 67  EDTWP 71
           E+ WP
Sbjct: 232 EEQWP 236

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|444513346|gb|ELV10311.1| Cyclin-dependent kinase 7 [Tupaia chinensis]

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 140 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 199

Query: 67  EDTWP 71
           E+ WP
Sbjct: 200 EEQWP 204

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449278692|gb|EMC86483.1| Cell division protein kinase 7, partial [Columba livia]

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/72 (73%), Positives = 63/72 (87%), Gaps = 2/72 (2%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 133 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 192

Query: 67  EDTWPTAGVKGL 78
           E+ WP  G+K L
Sbjct: 193 EEQWP--GMKSL 202

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395048|emb|CAA52242.1| protein kinase [Mus musculus]

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233

Query: 67  EDTWP 71
           E+ WP
Sbjct: 234 EEQWP 238

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|619509|emb|CAA58562.1| CdK-activating kinase Cdk7 [Rattus norvegicus]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 4/73 (5%)

Query: 3   NW----KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
           NW    + V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRI
Sbjct: 158 NWAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI 217

Query: 59  FQTLGTPSEDTWP 71
           F+TLGTP+E+ WP
Sbjct: 218 FETLGTPTEEQWP 230

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|149584761|ref|XP_001506541.1| PREDICTED: cyclin-dependent kinase 7-like, partial [Ornithorhynchus anatinus]

 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 152 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 211

Query: 67  EDTWP 71
           E+ WP
Sbjct: 212 EEQWP 216

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|62857669|ref|NP_001017219.1| cyclin-dependent kinase 7 [Xenopus (Silurana) tropicalis] gi|89268978|emb|CAJ83339.1| cyclin-dependent kinase 7 [Xenopus (Silurana) tropicalis]

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/65 (75%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + +PELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 180 VTRWYRSPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 239

Query: 67  EDTWP 71
           E+ WP
Sbjct: 240 EEQWP 244

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|307189191|gb|EFN73639.1| Cell division protein kinase 7 [Camponotus floridanus]

 Score =  118 bits (295), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELL+GAR+YG GIDMWAVGCI+ ELLL+ PFLPGESDLDQLTRIFQTLGTP+
Sbjct: 110 VTRWYRAPELLYGARLYGTGIDMWAVGCILAELLLRVPFLPGESDLDQLTRIFQTLGTPT 169

Query: 67  EDTWP 71
           ++TWP
Sbjct: 170 DETWP 174

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
RGD|621124	329	Cdk7 "cyclin-dependent kinase	0.811	0.209	0.712	3.6e-25
UNIPROTKB|P51952	329	Cdk7 "Cyclin-dependent kinase	0.811	0.209	0.712	3.6e-25
UNIPROTKB|Q08DX5	346	CDK7 "Cyclin-dependent kinase	0.764	0.187	0.769	4.6e-25
UNIPROTKB|E2R8R2	347	CDK7 "Uncharacterized protein"	0.764	0.187	0.769	4.6e-25
UNIPROTKB|E2R8R3	346	CDK7 "Uncharacterized protein"	0.764	0.187	0.769	4.6e-25
UNIPROTKB|D6R9G1	253	CDK7 "Cyclin-dependent kinase	0.764	0.256	0.769	4.6e-25
UNIPROTKB|D6RAD4	309	CDK7 "Cyclin-dependent kinase	0.764	0.210	0.769	4.6e-25
UNIPROTKB|D6REC6	149	CDK7 "Cyclin-dependent kinase	0.764	0.436	0.769	4.6e-25
UNIPROTKB|P50613	346	CDK7 "Cyclin-dependent kinase	0.764	0.187	0.769	4.6e-25
UNIPROTKB|C9K505	346	CDK7 "Uncharacterized protein"	0.764	0.187	0.769	4.6e-25

RGD|621124 Cdk7 "cyclin-dependent kinase 7" [Rattus norvegicus (taxid:10116)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 52/73 (71%), Positives = 62/73 (84%)

Query:     3 NW----KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
             NW    + V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRI
Sbjct:   158 NWAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI 217

Query:    59 FQTLGTPSEDTWP 71
             F+TLGTP+E+ WP
Sbjct:   218 FETLGTPTEEQWP 230

GO:0000307 "cyclin-dependent protein kinase holoenzyme complex" evidence=TAS

GO:0004672 "protein kinase activity" evidence=ISO;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005675 "holo TFIIH complex" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0006281 "DNA repair" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO;ISS

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0007049 "cell cycle" evidence=TAS

GO:0007126 "meiosis" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=ISO

GO:0008094 "DNA-dependent ATPase activity" evidence=ISO;ISS

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=ISO;ISS

GO:0016020 "membrane" evidence=IDA

GO:0016301 "kinase activity" evidence=ISO

GO:0016310 "phosphorylation" evidence=ISO

GO:0032403 "protein complex binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0051301 "cell division" evidence=IEA

UNIPROTKB|P51952 Cdk7 "Cyclin-dependent kinase 7" [Rattus norvegicus (taxid:10116)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 52/73 (71%), Positives = 62/73 (84%)

Query:     3 NW----KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
             NW    + V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRI
Sbjct:   158 NWAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI 217

Query:    59 FQTLGTPSEDTWP 71
             F+TLGTP+E+ WP
Sbjct:   218 FETLGTPTEEQWP 230

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q08DX5 CDK7 "Cyclin-dependent kinase 7" [Bos taurus (taxid:9913)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query:     7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
             V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct:   174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233

Query:    67 EDTWP 71
             E+ WP
Sbjct:   234 EEQWP 238

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0008094 "DNA-dependent ATPase activity" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005675 "holo TFIIH complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R8R2 CDK7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query:     7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
             V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct:   175 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 234

Query:    67 EDTWP 71
             E+ WP
Sbjct:   235 EEQWP 239

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0008094 "DNA-dependent ATPase activity" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005675 "holo TFIIH complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R8R3 CDK7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query:     7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
             V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct:   174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233

Query:    67 EDTWP 71
             E+ WP
Sbjct:   234 EEQWP 238

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|D6R9G1 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query:     7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
             V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct:    81 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 140

Query:    67 EDTWP 71
             E+ WP
Sbjct:   141 EEQWP 145

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|D6RAD4 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query:     7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
             V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct:   137 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 196

Query:    67 EDTWP 71
             E+ WP
Sbjct:   197 EEQWP 201

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|D6REC6 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query:     7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
             V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct:    81 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 140

Query:    67 EDTWP 71
             E+ WP
Sbjct:   141 EEQWP 145

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|P50613 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query:     7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
             V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct:   174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233

Query:    67 EDTWP 71
             E+ WP
Sbjct:   234 EEQWP 238

GO:0005524 "ATP binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IDA

GO:0003713 "transcription coactivator activity" evidence=NAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=NAS

GO:0050681 "androgen receptor binding" evidence=NAS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA;TAS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0008022 "protein C-terminus binding" evidence=IPI

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0030521 "androgen receptor signaling pathway" evidence=NAS

GO:0005675 "holo TFIIH complex" evidence=IDA

GO:0008094 "DNA-dependent ATPase activity" evidence=IDA

GO:0007050 "cell cycle arrest" evidence=TAS

GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=TAS

GO:0008283 "cell proliferation" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006281 "DNA repair" evidence=TAS

GO:0006283 "transcription-coupled nucleotide-excision repair" evidence=TAS

GO:0006289 "nucleotide-excision repair" evidence=TAS

GO:0006360 "transcription from RNA polymerase I promoter" evidence=TAS

GO:0006361 "transcription initiation from RNA polymerase I promoter" evidence=TAS

GO:0006362 "transcription elongation from RNA polymerase I promoter" evidence=TAS

GO:0006363 "termination of RNA polymerase I transcription" evidence=TAS

GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=TAS

GO:0006370 "7-methylguanosine mRNA capping" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0050434 "positive regulation of viral transcription" evidence=TAS

GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0000084 "S phase of mitotic cell cycle" evidence=TAS

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0000718 "nucleotide-excision repair, DNA damage removal" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|C9K505 CDK7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query:     7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
             V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct:   174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233

Query:    67 EDTWP 71
             E+ WP
Sbjct:   234 EEQWP 238

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P50613	CDK7_HUMAN	2, ., 7, ., 1, 1, ., 2, 3	0.7692	0.7647	0.1878	yes	N/A
P29620	CDKD1_ORYSJ	2, ., 7, ., 1, 1, ., 2, 3	0.5737	0.7176	0.1438	yes	N/A
Q9LMT0	CDKD3_ARATH	2, ., 7, ., 1, 1, ., 2, 3	0.6065	0.7176	0.1560	yes	N/A
P51952	CDK7_RAT	2, ., 7, ., 1, 1, ., 2, 3	0.7123	0.8117	0.2097	yes	N/A
Q03147	CDK7_MOUSE	2, ., 7, ., 1, 1, ., 2, 3	0.7692	0.7647	0.1878	yes	N/A
P54685	CDK7_DICDI	2, ., 7, ., 1, 1, ., 2, 3	0.5068	0.8352	0.1972	yes	N/A
P06242	KIN28_YEAST	2, ., 7, ., 1, 1, ., 2, 3	0.5076	0.7647	0.2124	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	85
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	6e-38
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-32
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-29
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-28
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-28
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-27
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-26
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	5e-26
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-23
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-23
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-23
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-22
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-22
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-22
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-21
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-21
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-20
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-20
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-20
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	8e-20
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-19
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-19
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-19
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-19
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	9e-18
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-16
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-16
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-16
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-16
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-16
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	4e-16
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	8e-16
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-15
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-15
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	9e-15
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-14
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-14
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-14
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-14
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	8e-14
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-13
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	4e-13
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-13
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	5e-13
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	9e-13
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-12
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-12
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	3e-12
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	9e-12
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	6e-11
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-11
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	8e-11
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-10
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-09
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-09
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-09
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	6e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-06
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-06
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-05
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-05
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-04
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-04
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-04
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	5e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	7e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	9e-04
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.001
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	0.001
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.001
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	0.001
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.001
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	0.002
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	0.002
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.002
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.002
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	0.003
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	0.003
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.004
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.004

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  127 bits (322), Expect = 6e-38
 Identities = 43/59 (72%), Positives = 52/59 (88%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           APELLFGAR YGVG+DMW+VGCI  ELLL+ PFLPG+SD+DQL +IF+ LGTP+E+ WP
Sbjct: 170 APELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  112 bits (284), Expect = 2e-32
 Identities = 30/59 (50%), Positives = 45/59 (76%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           APE+L G++ Y   +D+W+VGCI  E++   P  PG+S++DQL +IFQ LGTP+E++WP
Sbjct: 166 APEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP 224

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  105 bits (263), Expect = 3e-29
 Identities = 37/62 (59%), Positives = 49/62 (79%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APELL+GAR Y  G+D+WAVGCI  ELL  +P  PGE+D++QL  +F+TLGTP+E+TW
Sbjct: 166 YRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETW 225

Query: 71  PT 72
           P 
Sbjct: 226 PG 227

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  102 bits (256), Expect = 2e-28
 Identities = 32/59 (54%), Positives = 43/59 (72%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           APELL G + Y   +D+W+VGCI  ELL + P  PG+S++DQL +IF+TLGTP  + WP
Sbjct: 166 APELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWP 224

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  102 bits (257), Expect = 2e-28
 Identities = 36/59 (61%), Positives = 44/59 (74%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           APELL GA+ Y   IDMW+VGCI  ELL K P  PG+S++DQL +IF+ LGTP+E  WP
Sbjct: 174 APELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 98.8 bits (247), Expect = 5e-27
 Identities = 29/59 (49%), Positives = 41/59 (69%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
            PELL GA  YG  +DMW+VGCI+ EL L  P   G ++L+QL +IF+  G+P+++ WP
Sbjct: 169 PPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 97.8 bits (244), Expect = 1e-26
 Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APE+L G+R Y   +D+W++GCI  E++ + P  PG+S++DQL RIF+TLGTP ED WP 
Sbjct: 167 APEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWP- 225

Query: 73  AGVKGL 78
            GV  L
Sbjct: 226 -GVTSL 230

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 97.1 bits (242), Expect = 5e-26
 Identities = 37/61 (60%), Positives = 44/61 (72%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APELL GA  Y   +DMW+VGCI  ELL   P  PGE+++DQL RIF+ LGTP+ED WP 
Sbjct: 201 APELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQ 260

Query: 73  A 73
           A
Sbjct: 261 A 261

Length = 335

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 90.1 bits (224), Expect = 2e-23
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
            PELL G R Y   +D+W +GC+  E+  + P L G+SD+DQL  IF+  GTP+E+TWP 
Sbjct: 194 PPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPG 253

Query: 73  A----GVKGLFS 80
                G +G+ S
Sbjct: 254 WRSLPGCEGVHS 265

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 89.5 bits (222), Expect = 2e-23
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G+  Y   +D+W+VGCI  E+  K P  PG+S+L QL  IF+ LGTP+E  W
Sbjct: 177 YRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236

Query: 71  PTAGVKGL 78
           P  GV  L
Sbjct: 237 P--GVSKL 242

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 88.7 bits (220), Expect = 5e-23
 Identities = 33/68 (48%), Positives = 50/68 (73%), Gaps = 2/68 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G+R Y   +D+W+VGCI  E++ + P  PG+S++D+L +IF+ LGTP+E+TW
Sbjct: 169 YRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228

Query: 71  PTAGVKGL 78
           P  GV  L
Sbjct: 229 P--GVTSL 234

Length = 294

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 87.4 bits (217), Expect = 2e-22
 Identities = 35/59 (59%), Positives = 41/59 (69%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           APELL G   Y   IDMWAVGCI+ ELL   P LPG+S+++QL  I Q LGTP+E  WP
Sbjct: 176 APELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP 234

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 86.3 bits (214), Expect = 3e-22
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G+  Y   +D+W++G I  E+  K P   G+S++DQL RIF+ LGTP+ED W
Sbjct: 167 YRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVW 226

Query: 71  PTAGVKGL 78
           P  GV  L
Sbjct: 227 P--GVTSL 232

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 86.4 bits (214), Expect = 3e-22
 Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 166 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 225

Query: 71  PTAGVKGL 78
           P  GV  L
Sbjct: 226 P--GVTSL 231

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 84.9 bits (211), Expect = 2e-21
 Identities = 29/56 (51%), Positives = 36/56 (64%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APELL  +  Y   ID+W+VGCI  ELL + P  PG   +DQL  I + LGTPSE+
Sbjct: 174 APELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE 229

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 83.0 bits (206), Expect = 5e-21
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           APE+L  +  Y   +D+WA+GCI+ EL    P  PG S++DQL +I   LGTP++  WP
Sbjct: 166 APEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWP 224

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 82.0 bits (203), Expect = 1e-20
 Identities = 28/52 (53%), Positives = 35/52 (67%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT 64
           APELL G   YG  +D+WA+GCI+ ELL   P  PG+SD+DQL  I + LG 
Sbjct: 169 APELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGP 220

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 81.7 bits (202), Expect = 2e-20
 Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PFLPGESDLDQLTRIFQTLGTPSEDT 69
           +  P++LFGA++Y   IDMW+ GCI  EL     P  PG    DQL RIF+ LGTP+E++
Sbjct: 165 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEES 224

Query: 70  WP 71
           WP
Sbjct: 225 WP 226

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 81.9 bits (203), Expect = 2e-20
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           APE+L  +  Y   +DMW+VGCI  EL  + P   G S+ DQL +IF  +G PSE+ WP
Sbjct: 174 APEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 80.4 bits (199), Expect = 8e-20
 Identities = 34/69 (49%), Positives = 38/69 (55%), Gaps = 9/69 (13%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLG 63
           APELL GAR Y   ID+WA+GCI  ELL   P   G             DQL RIF+ LG
Sbjct: 183 APELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLG 242

Query: 64  TPSEDTWPT 72
           TP+E  WP 
Sbjct: 243 TPTEKDWPD 251

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 79.9 bits (198), Expect = 1e-19
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APE+L G+  Y  G+DMW+VGCI+ E+LL  P  PG S L+QL +I + +G PS +
Sbjct: 180 APEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 79.3 bits (196), Expect = 1e-19
 Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 14  PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQTLGTPSEDTWPT 72
           P++L G+  Y   +DMW VGCI  E+    P  PG +D  DQL +IF+ LGTP+E+TWP 
Sbjct: 172 PDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPG 231

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 80.1 bits (197), Expect = 2e-19
 Identities = 31/58 (53%), Positives = 41/58 (70%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APEL+ GA  Y   ID+W++GCII E++L  P   G+S +DQL RI Q LGTP+ED
Sbjct: 236 YRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293

Length = 440

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 77.9 bits (192), Expect = 4e-19
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + AP++L G+R Y   ID+W+VGCI+ E++   P  PG ++ DQL +IF+ +GTP+E TW
Sbjct: 166 YRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTW 225

Query: 71  P 71
           P
Sbjct: 226 P 226

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 74.7 bits (184), Expect = 9e-18
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APE++   + Y   ID+W+VGCI+ ELL + P   G+  +DQL +I Q LGTP E+T   
Sbjct: 177 APEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236

Query: 73  AGVKGLFSLIR 83
            G     + IR
Sbjct: 237 IGSPKAQNYIR 247

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 71.6 bits (176), Expect = 2e-16
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  L QL  I   LGTPS++
Sbjct: 177 APEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 71.2 bits (175), Expect = 2e-16
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 63
           APELL G   YG  +D+WA+GC+  ELL   P  PG+SD+DQL  I +TLG
Sbjct: 168 APELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLG 218

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 70.9 bits (174), Expect = 2e-16
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT 64
           + APELL G   YG  +D+WAVGC++ E+L   P  PG+SD+DQL  I + LG 
Sbjct: 166 YRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGN 219

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 70.8 bits (173), Expect = 2e-16
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  P++L G+  Y   IDMW VGCI  E+    P  PG +  D+L  IF+ LGTP+E+TW
Sbjct: 170 YRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW 229

Query: 71  P 71
           P
Sbjct: 230 P 230

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 70.5 bits (172), Expect = 3e-16
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL-DQLTRIFQTLGTPSEDT 69
           +  P++L G+  Y   +DMW VGCI  E++      PG  D+ DQL RIF  LGTP+EDT
Sbjct: 169 YRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDT 228

Query: 70  WPTAGVKGL 78
           WP  GV  L
Sbjct: 229 WP--GVHSL 235

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 69.6 bits (171), Expect = 4e-16
 Identities = 28/62 (45%), Positives = 37/62 (59%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +MAPE+L G   YG  +D+W++G I+ ELL   P   GE+ LDQL  I + LG P E   
Sbjct: 164 YMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDE 223

Query: 71  PT 72
           P 
Sbjct: 224 PK 225

Length = 260

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 70.0 bits (171), Expect = 4e-16
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  P++L G+  Y   IDMW VGCI  E+    P  PG +  +QL  IF+ LGTP+E+TW
Sbjct: 170 YRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETW 229

Query: 71  P 71
           P
Sbjct: 230 P 230

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 69.3 bits (169), Expect = 8e-16
 Identities = 27/61 (44%), Positives = 39/61 (63%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  P++L G+  Y   IDMW VGCI+ E+    P  PG +  ++L  IF+ LGTP+E+TW
Sbjct: 169 YRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228

Query: 71  P 71
           P
Sbjct: 229 P 229

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 69.3 bits (170), Expect = 1e-15
 Identities = 26/56 (46%), Positives = 34/56 (60%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APELL     Y   IDMW+VGCI  E+L +    PG++ + QL  I   LG+PSE+
Sbjct: 179 APELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 68.2 bits (167), Expect = 3e-15
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELL     Y   ID+W+VGCI  ELL + P  PG+  + QL  I + LG+PS
Sbjct: 170 VTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPS 229

Query: 67  ED 68
           E+
Sbjct: 230 EE 231

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 66.6 bits (162), Expect = 9e-15
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ W
Sbjct: 175 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233

Query: 71  P 71
           P
Sbjct: 234 P 234

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 66.1 bits (161), Expect = 1e-14
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED W
Sbjct: 173 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231

Query: 71  PT 72
           P 
Sbjct: 232 PR 233

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 66.5 bits (163), Expect = 1e-14
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI   +GTP E+
Sbjct: 183 APEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 65.9 bits (161), Expect = 2e-14
 Identities = 26/59 (44%), Positives = 36/59 (61%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
            PELL G R YG  IDMW  GCI+ E+  ++P + G ++  QLT I Q  G+ + + WP
Sbjct: 191 PPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP 249

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 64.6 bits (158), Expect = 4e-14
 Identities = 25/56 (44%), Positives = 34/56 (60%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APE L     YG  +D+WAVGC+  E+L   P  PG ++LDQ+ +I   LGTP  +
Sbjct: 166 APECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAE 221

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 63.8 bits (155), Expect = 8e-14
 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQTLGTPSEDT 69
           +  P++L GA  Y   +D+W  GCI  E+L   P  PG SD  +QL +I+  LG P+EDT
Sbjct: 169 YRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDT 228

Query: 70  WP 71
           WP
Sbjct: 229 WP 230

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 62.4 bits (151), Expect = 3e-13
 Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 9/69 (13%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAP-FLPGESDL--------DQLTRIFQT 61
           + APELL GAR Y   ID+WA+GCI  ELL   P F   + D+        DQL RIF  
Sbjct: 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 240

Query: 62  LGTPSEDTW 70
           +G P++  W
Sbjct: 241 MGFPADKDW 249

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 61.9 bits (150), Expect = 4e-13
 Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT-PSE 67
           + +PELL GA  YG  +DMW+VGCI+ EL    P  PGES++DQL  I + LG  P+E
Sbjct: 167 YRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAE 223

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 61.7 bits (150), Expect = 5e-13
 Identities = 25/58 (43%), Positives = 31/58 (53%)

Query: 14  PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           PELL G   YG  ID+W+ GCI+ EL  K P      +L QL  I +  G+P    WP
Sbjct: 186 PELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP 243

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 61.6 bits (149), Expect = 5e-13
 Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 9/69 (13%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAP-FLPGESDL--------DQLTRIFQT 61
           + APELL GAR Y   ID+WA+GCI  ELL   P F   + D+        DQL RIF  
Sbjct: 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSV 240

Query: 62  LGTPSEDTW 70
           +G P++  W
Sbjct: 241 MGFPADKDW 249

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 61.3 bits (149), Expect = 9e-13
 Identities = 26/60 (43%), Positives = 36/60 (60%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE+L G+R Y   +D+W+VGCI  ELL +      +S + QL  I   LGTPS
Sbjct: 166 VTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPS 225

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 6/62 (9%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           +MAPE+L G + YG  +D+W++G I+ ELL  K PF       DQL  +F+ +G P    
Sbjct: 162 YMAPEVLLG-KGYGKAVDIWSLGVILYELLTGKPPF----PGDDQLLELFKKIGKPKPPF 216

Query: 70  WP 71
            P
Sbjct: 217 PP 218

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 60.2 bits (146), Expect = 2e-12
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++   + Y V +D+W+ GCI  E+L   P  PG+  ++Q + I   LGTP +D
Sbjct: 171 YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDD 228

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 60.1 bits (145), Expect = 3e-12
 Identities = 24/58 (41%), Positives = 35/58 (60%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI + +GTPS +
Sbjct: 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPE 238

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 58.4 bits (141), Expect = 9e-12
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++     Y   +D+W+VGCI+ E+L   P   G   LDQL  I +  GTPS
Sbjct: 177 VTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPS 236

Query: 67  ED 68
           ++
Sbjct: 237 KE 238

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 56.3 bits (136), Expect = 6e-11
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 3/63 (4%)

Query: 7   VRKAFMAPELLFGARM-YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G  M Y   +D+W+VGCI+ E++      PG   +DQ  +I + LGTP
Sbjct: 179 VTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTP 236

Query: 66  SED 68
           S++
Sbjct: 237 SDE 239

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 55.8 bits (134), Expect = 8e-11
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 183 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 55.6 bits (134), Expect = 8e-11
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 11  FMAPELL--FGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APEL   F ++ Y   ID+W++GCI  E+L   P  PG++ + QL  I   LGTPS +
Sbjct: 172 YRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230

Query: 69  T 69
           T
Sbjct: 231 T 231

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 53.6 bits (129), Expect = 4e-10
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 62
           V K + +P LL     Y   IDMWA GCI  E+L   P   G  +L+Q+  I +++
Sbjct: 180 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV 235

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 51.2 bits (122), Expect = 3e-09
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 51.2 bits (122), Expect = 4e-09
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VGCI+ EL+  +    G   +DQ  ++ + LGTPS
Sbjct: 184 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 242

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 50.7 bits (121), Expect = 4e-09
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++     Y   +D+W+VGCI+ E+L       G+  LDQLT+I +  G P 
Sbjct: 176 VTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235

Query: 67  ED 68
            +
Sbjct: 236 PE 237

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 50.5 bits (120), Expect = 6e-09
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 180 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 46.3 bits (108), Expect = 2e-07
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 10  AFMAPELLFG--ARMYGVGIDMWAVGCIICELLL-KAPF--LPGESDLDQLTRIFQTLGT 64
            +MAPE+L G          D+W++G  + ELL    PF      S   Q  +I   L T
Sbjct: 173 GYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT 232

Query: 65  PS-----EDTWPTAGVKGLFSLIR 83
           PS       + P    K    L++
Sbjct: 233 PSLASPLSPSNPELISKAASDLLK 256

Length = 384

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDL--DQLTRIFQTLGTP 65
             +MAPE+L   + Y V +D W++G    E L  K P+  G S    DQ+    +T    
Sbjct: 163 PGYMAPEVLC-RQGYSVAVDWWSLGVTAYECLRGKRPY-RGHSRTIRDQIRAKQETADVL 220

Query: 66  SEDTWPTAGVKGLFSLI 82
              TW T  +  +  L+
Sbjct: 221 YPATWSTEAIDAINKLL 237

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICEL 39
           A+MAPE+L G   Y    D+W++G I+ EL
Sbjct: 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 42.2 bits (99), Expect = 5e-06
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ---TLGTPS 66
           AFMAPE+L G + YG   D+W+VGC+I E+    P    E   + L  IF+       PS
Sbjct: 173 AFMAPEVLRGEQ-YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPS 231

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
           +++PEL      Y    D+W++GC++ EL  LK PF
Sbjct: 169 YLSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPF 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 39.3 bits (92), Expect = 5e-05
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           +M+PEL  G + Y    D+WA+GC++ ELL LK  F    + L+ + +I Q   TP    
Sbjct: 167 YMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTF-DATNPLNLVVKIVQGNYTPVVSV 224

Query: 70  WPTAGVKGLFSLIRA 84
           +       L SL+ +
Sbjct: 225 YS----SELISLVHS 235

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 12  MAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
           +APE+L G   YG  +D W++G ++ E+L  K PF
Sbjct: 160 LAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPF 193

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQL 55
           ++APE++   + Y   +D W++G ++ ELL  + PF  GE D D +
Sbjct: 158 YVAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPF--GEDDEDPM 200

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 8/66 (12%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLT--RIF---QTLGTP 65
           ++APE+L G   YG+  D W++G I+ E+L   P  P  SD  Q T  +I    ++L  P
Sbjct: 196 YIAPEVLRGTP-YGLECDWWSLGVILYEMLYGFP--PFYSDTLQETYNKIINWKESLRFP 252

Query: 66  SEDTWP 71
            +    
Sbjct: 253 PDPPVS 258

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
           +++PELL      G   D+WA+GCII ++L  K PF
Sbjct: 188 YVSPELLNEKPA-GKSSDLWALGCIIYQMLTGKPPF 222

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 37.5 bits (87), Expect = 2e-04
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
           +MAPE++   R Y    D W +GC+I E++  K+PF
Sbjct: 167 YMAPEVVKNER-YTFSPDWWGLGCLIYEMIEGKSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
           +M+PE L     Y    D+W++GC+I EL  L  PF
Sbjct: 176 YMSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPF 210

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
            +MAPE++ G   YG   D+W++GC + E+   K P+
Sbjct: 168 YWMAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPW 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGE 49
           F+APE+L     Y   +D W +G +I E+L+ ++PF PG+
Sbjct: 167 FLAPEVLTETS-YTRAVDWWGLGVLIYEMLVGESPF-PGD 204

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAP 44
           ++APE++ G + +   +D W++GCI+ E L+  P
Sbjct: 167 YIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIP 199

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 36.7 bits (85), Expect = 3e-04
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 6/51 (11%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
           +MAPE++     Y    D+W++GC++ E+L  K PF     D  QL  IF+
Sbjct: 178 WMAPEVV-KQTSYTRKADIWSLGCLVVEMLTGKHPF----PDCTQLQAIFK 223

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 36.3 bits (84), Expect = 5e-04
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 11  FMAPELL-FGARMYGVGIDMWAVGCIICELLL-KAPF 45
           +MAPE++  G R YG   D+W++GC I E+   K PF
Sbjct: 175 YMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF 211

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES 50
           +MAPE+L G + Y   +D W++GC++ E L   P   G +
Sbjct: 164 YMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGST 202

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 36.2 bits (84), Expect = 7e-04
 Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 2/32 (6%)

Query: 10  AFMAPELLFGARMYGVG--IDMWAVGCIICEL 39
           A+MAPE++ G +  G G   D+W++GC++ E+
Sbjct: 168 AYMAPEVITGGKGKGHGRAADIWSLGCVVLEM 199

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 35.9 bits (83), Expect = 7e-04
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 6/62 (9%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           +M+PE++ G   YG   D+W+VGC + E+L  K P+    ++ + +  IF+    P+   
Sbjct: 173 WMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPW----AEFEAMAAIFKIATQPTNPQ 227

Query: 70  WP 71
            P
Sbjct: 228 LP 229

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 35.8 bits (82), Expect = 9e-04
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +M+PE++ G   YG   D+W+VGC + E+L +    P  ++ + +  IF+    P+    
Sbjct: 175 WMSPEVISG-EGYGRKADIWSVGCTVVEMLTEK---PPWAEFEAMAAIFKIATQPTNPVL 230

Query: 71  P 71
           P
Sbjct: 231 P 231

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 35.9 bits (82), Expect = 0.001
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 11  FMAPELLFG-ARMYGVGIDMWAVGCIICELLL-KAPF 45
           + +PELL    + Y    DMWA+GCII EL   K PF
Sbjct: 207 YWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243

Length = 1021

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 35.5 bits (82), Expect = 0.001
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 5/50 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF 59
           +MAPE++     YG+  D+W++GC + E+   K P+    S L+ +  +F
Sbjct: 167 WMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPW----SQLEGVAAVF 212

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 18/81 (22%)

Query: 2   QNWKKVRKA----------FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD 51
           + WK+ R+A          ++APE+ F    Y    D W++G I+ E+L+  P  P  SD
Sbjct: 186 ETWKRNRRALAYSTVGTPDYIAPEV-FLQTGYNKECDWWSLGVIMYEMLVGYP--PFCSD 242

Query: 52  LDQLT--RIF---QTLGTPSE 67
             Q T  +I    +TL  P E
Sbjct: 243 NPQETYRKIINWKETLQFPDE 263

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 35.3 bits (81), Expect = 0.001
 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PF-LPGESD 51
           +MAPE++ G   +G  +D W++G +I ELL  A PF L GE +
Sbjct: 172 YMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN 214

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICEL-LLKAPF----LPGESDLDQLTRIFQ 60
            ++MAPE + G   Y V  D+W++G  + EL   + P+     P +   + L  I  
Sbjct: 163 SSYMAPERIQGND-YSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN 218

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 34.9 bits (81), Expect = 0.002
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGES 50
            +M+PE + G   Y    D+W++G  + E  L K PFLP   
Sbjct: 165 TYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQ 205

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 11  FMAPELLFG-ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT-PSE 67
           + +PE++ G   MY    DMW++GCII EL           +L+ L  + +TLG  PSE
Sbjct: 311 YRSPEVVLGLGWMYST--DMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSE 367

Length = 467

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 4/62 (6%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +M+PE++ G   YG   D+W++GC + E+L +    P  ++ + +  IF+    P+    
Sbjct: 175 WMSPEVISG-EGYGRKADVWSLGCTVVEMLTEK---PPWAEYEAMAAIFKIATQPTNPQL 230

Query: 71  PT 72
           P+
Sbjct: 231 PS 232

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
           +MAPE+L G   Y   +D +A+GC + E++  ++PF
Sbjct: 160 YMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 34.4 bits (79), Expect = 0.003
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)

Query: 11  FMAPELL-----FGARMYGVGIDMWAVGCIICELLL-KAPFLPGES 50
           ++APE+L      G   YGV  D W++G I  E++  ++PF  G S
Sbjct: 169 YIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS 214

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 34.3 bits (78), Expect = 0.003
 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 6/57 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF-LPGESD-LDQLTR--IFQTL 62
           ++APE+L G   YG  +D WA+G ++ E++  ++PF + G SD  DQ T   +FQ +
Sbjct: 162 YIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 217

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
            +MAPE+L   R Y +  D W +GC+I E++  ++PF
Sbjct: 166 GYMAPEVLNNQR-YTLSPDYWGLGCLIYEMIEGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 33.8 bits (77), Expect = 0.004
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +M+PE++ G   YG   D+W+V C + E+L +    P  ++ + +  IF+    P++   
Sbjct: 175 WMSPEVISG-EGYGRKADVWSVACTVVEMLTEK---PPWAEYEAMAAIFKIATQPTKPML 230

Query: 71  P 71
           P
Sbjct: 231 P 231

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
KOG0598|consensus	357		99.84
KOG0616|consensus	355		99.83
KOG0578|consensus	550		99.83
KOG0694|consensus	694		99.82
KOG0605|consensus	550		99.82
KOG0591|consensus	375		99.79
KOG0033|consensus	355		99.78
KOG0614|consensus	732		99.78
KOG0610|consensus	459		99.77
KOG0575|consensus	592		99.76
KOG0696|consensus	683		99.75
KOG0201|consensus	467		99.74
KOG0588|consensus	786		99.73
KOG0659|consensus	318		99.72
KOG0592|consensus	604		99.71
KOG0581|consensus	364		99.71
KOG0595|consensus	429		99.7
KOG0660|consensus	359		99.69
KOG0597|consensus	808		99.69
KOG0583|consensus	370		99.68
KOG0574|consensus	502		99.68
KOG0667|consensus	586		99.67
KOG0594|consensus	323		99.67
KOG0690|consensus	516		99.67
KOG0661|consensus	538		99.66
KOG0579|consensus	1187		99.63
KOG0663|consensus	419		99.62
KOG0577|consensus	948		99.62
KOG0615|consensus	475		99.62
KOG0580|consensus	281		99.61
KOG0658|consensus	364		99.61
KOG0032|consensus	382		99.61
KOG0600|consensus	560		99.6
KOG0589|consensus	426		99.59
KOG0593|consensus	396		99.58
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.57
KOG0695|consensus	593		99.55
PTZ00284	467	protein kinase; Provisional	99.55
KOG4721|consensus	904		99.55
KOG0197|consensus	468		99.55
PTZ00036	440	glycogen synthase kinase; Provisional	99.55
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.54
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.53
KOG4717|consensus	864		99.52
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.52
KOG0986|consensus	591		99.52
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.52
KOG0198|consensus	313		99.51
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.51
KOG0599|consensus	411		99.5
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.5
KOG0587|consensus	953		99.5
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.5
KOG0604|consensus	400		99.49
KOG0671|consensus	415		99.49
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.49
KOG0192|consensus	362		99.49
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.49
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.49
PTZ00283	496	serine/threonine protein kinase; Provisional	99.48
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.48
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.48
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.48
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.48
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.48
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.48
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.47
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.47
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.47
KOG0196|consensus	996		99.47
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.47
KOG4279|consensus	1226		99.46
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.46
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.46
KOG0608|consensus	1034		99.46
PTZ00267	478	NIMA-related protein kinase; Provisional	99.46
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.46
KOG0585|consensus	576		99.45
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.45
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.45
KOG0611|consensus	668		99.44
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.44
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.44
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.44
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.43
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.43
KOG0582|consensus	516		99.43
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.42
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.42
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.42
KOG0983|consensus	391		99.42
PHA02988	283	hypothetical protein; Provisional	99.41
KOG0612|consensus	1317		99.41
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.41
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.4
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.4
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.39
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.39
KOG0666|consensus	438		99.39
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.39
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.39
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.38
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.37
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.37
KOG1095|consensus	1025		99.37
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.37
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.37
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.37
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.36
KOG0665|consensus	369		99.36
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.36
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.36
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.35
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.35
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.33
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.33
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.33
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.33
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.33
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.32
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.32
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.32
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.31
KOG4645|consensus	1509		99.31
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.31
KOG0607|consensus	463		99.31
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.3
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.3
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.3
KOG1026|consensus	774		99.29
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.29
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.29
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.29
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.29
KOG4236|consensus	888		99.28
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.28
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.28
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.28
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.28
KOG0669|consensus	376		99.28
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.28
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.27
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.27
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.27
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.27
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.26
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.26
KOG0662|consensus	292		99.26
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.26
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.26
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.26
KOG0596|consensus	677		99.26
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.26
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.26
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.25
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.25
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.25
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.25
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.24
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.24
KOG0603|consensus	612		99.24
PHA02882	294	putative serine/threonine kinase; Provisional	99.24
KOG0606|consensus	1205		99.24
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.24
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.23
KOG1006|consensus	361		99.23
PLN00009	294	cyclin-dependent kinase A; Provisional	99.23
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.23
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.23
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.23
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.23
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.23
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.22
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.22
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.22
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.22
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.22
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.22
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.22
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.21
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.21
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.21
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.21
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.21
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.2
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.2
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.2
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.2
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.2
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.19
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.19
KOG1290|consensus	590		99.19
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.19
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.19
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.19
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.19
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.19
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.19
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.19
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.18
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.18
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.18
KOG0670|consensus	752		99.18
KOG0664|consensus	449		99.18
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.18
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.18
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.17
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.17
KOG1024|consensus	563		99.17
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.17
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.17
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.17
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.17
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.16
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.16
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.16
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.16
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.16
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.16
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.16
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.16
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.16
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.16
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.16
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.16
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.16
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.15
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.15
PHA03212	391	serine/threonine kinase US3; Provisional	99.15
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.15
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.15
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.15
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.15
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.15
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.15
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.15
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.14
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.14
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.14
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.14
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.14
KOG0199|consensus	1039		99.14
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.14
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.14
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.14
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.14
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.13
KOG0586|consensus	596		99.13
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.13
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.13
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.13
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.13
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.13
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.13
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.13
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.13
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.13
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.13
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.13
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.13
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.13
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.12
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.12
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.12
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.12
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.12
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.12
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.11
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.11
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.11
KOG0193|consensus	678		99.11
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.11
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.11
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.11
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.11
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.11
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.11
PHA03207	392	serine/threonine kinase US3; Provisional	99.11
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.1
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.1
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.09
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.09
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.09
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.09
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.09
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.09
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.09
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.09
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.09
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.08
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.08
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.08
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.08
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.08
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.07
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.07
KOG4250|consensus	732		99.06
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.06
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.06
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.06
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.06
KOG0584|consensus	632		99.06
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.05
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.05
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.05
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.04
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.04
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.04
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.04
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.04
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.04
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.04
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.04
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.04
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.04
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.03
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.03
KOG0576|consensus	829		99.03
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.03
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.03
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.03
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.02
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.02
KOG1151|consensus	775		99.02
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.02
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.02
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.02
KOG1989|consensus	738		99.01
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.01
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.01
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.01
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.01
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.0
KOG4278|consensus	1157		99.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.99
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.99
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.99
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.99
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.99
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.99
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.99
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.98
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.98
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.98
KOG0984|consensus	282		98.97
PLN00181	793	protein SPA1-RELATED; Provisional	98.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.96
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.96
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.96
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.95
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.94
KOG0200|consensus	609		98.94
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.93
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.92
KOG0194|consensus	474		98.91
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.91
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.9
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.9
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.9
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.9
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.9
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.88
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.88
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.88
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.87
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.86
KOG0603|consensus	612		98.86
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.86
PHA03209	357	serine/threonine kinase US3; Provisional	98.85
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.84
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.84
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.84
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.83
KOG4257|consensus	974		98.82
PHA03210	501	serine/threonine kinase US3; Provisional	98.82
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.81
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.8
PHA03211	461	serine/threonine kinase US3; Provisional	98.79
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.79
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.76
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.76
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.75
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.71
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.66
KOG1025|consensus	1177		98.66
KOG2345|consensus	302		98.56
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.55
KOG0668|consensus	338		98.52
KOG0195|consensus	448		98.52
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.48
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.47
KOG1035|consensus	1351		98.47
KOG1033|consensus	516		98.23
KOG1167|consensus	418		98.21
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.2
KOG2052|consensus	513		98.15
KOG0606|consensus	1205		98.13
KOG1094|consensus	807		98.07
KOG1187|consensus	361		98.07
KOG1152|consensus	772		98.04
KOG3653|consensus	534		98.02
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.68
KOG1027|consensus	903		97.66
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.66
KOG0590|consensus	601		97.61
KOG4158|consensus	598		97.2
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.2
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	96.29
KOG0590|consensus	601		95.92
KOG1345|consensus	378		95.85
KOG1164|consensus	322		95.45
KOG1023|consensus	484		94.61
KOG1240|consensus	1431		93.61
KOG1165|consensus	449		93.49
COG4248	637	Uncharacterized protein with protein kinase and he	88.6
KOG0576|consensus	829		85.08
KOG2137|consensus	700		82.29

>KOG0598|consensus

Probab=99.84  E-value=6.3e-21  Score=105.29  Aligned_cols=81  Identities=21%  Similarity=0.319  Sum_probs=64.7

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      .+++|||+.|||||++...+ |+..+|+|++|+++|+|++|.+||.+.+......+|.+.-...++..++....+.+..+
T Consensus       182 t~tfcGT~eYmAPEil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~L  260 (357)
T KOG0598|consen  182 TRTFCGTPEYMAPEILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKL  260 (357)
T ss_pred             cccccCCccccChHHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHH
Confidence            35789999999999999988 99999999999999999999999999999999999987643333333444444444444


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      +.
T Consensus       261 L~  262 (357)
T KOG0598|consen  261 LK  262 (357)
T ss_pred             hc
Confidence            43

>KOG0616|consensus

Probab=99.83  E-value=1.4e-20  Score=102.21  Aligned_cols=74  Identities=20%  Similarity=0.379  Sum_probs=64.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      +.||||.|+|||++...+ |+..+|+|++|++.|||+.|.+||.+.++..++++|.++.     ..+|...+.+++++++
T Consensus       200 TlCGTPeYLAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~-----v~fP~~fs~~~kdLl~  273 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK-----VKFPSYFSSDAKDLLK  273 (355)
T ss_pred             EecCCccccChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc-----ccCCcccCHHHHHHHH
Confidence            579999999999999988 9999999999999999999999999999999999998763     4456666667766665

>KOG0578|consensus

Probab=99.83  E-value=1e-20  Score=108.90  Aligned_cols=80  Identities=23%  Similarity=0.322  Sum_probs=70.9

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      +++.+|||+|||||++.... |+.++|+||+|++.+||+.|.+||..+++..++.+|... + .|....++..+.++++|
T Consensus       426 R~TmVGTPYWMAPEVvtrk~-YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g-~P~lk~~~klS~~~kdF  502 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVTRKP-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-G-TPKLKNPEKLSPELKDF  502 (550)
T ss_pred             cccccCCCCccchhhhhhcc-cCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-C-CCCcCCccccCHHHHHH
Confidence            67889999999999999888 999999999999999999999999999999999888554 3 44555689999999999


Q ss_pred             hhc
Q psy13989         82 IRA   84 (85)
Q Consensus        82 ~~~   84 (85)
                      |.+
T Consensus       503 L~~  505 (550)
T KOG0578|consen  503 LDR  505 (550)
T ss_pred             HHH
Confidence            874

>KOG0694|consensus

Probab=99.82  E-value=2.5e-20  Score=109.30  Aligned_cols=77  Identities=23%  Similarity=0.456  Sum_probs=66.7

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      .++|||||.|+|||++.... |+..+|+|++|+++|+|+.|..||.|++..+....|...     ....|-..+.++.++
T Consensus       525 TsTfCGTpey~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d-----~~~yP~~ls~ea~~i  598 (694)
T KOG0694|consen  525 TSTFCGTPEFLAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND-----EVRYPRFLSKEAIAI  598 (694)
T ss_pred             cccccCChhhcChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC-----CCCCCCcccHHHHHH
Confidence            57899999999999999887 999999999999999999999999999999999888754     455666677777766


Q ss_pred             hhc
Q psy13989         82 IRA   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus       599 l~~  601 (694)
T KOG0694|consen  599 MRR  601 (694)
T ss_pred             HHH
Confidence            653

>KOG0605|consensus

Probab=99.82  E-value=5.1e-20  Score=105.70  Aligned_cols=78  Identities=28%  Similarity=0.458  Sum_probs=65.4

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh---cCCCCCCCcchhchhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT---LGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~p~~~~~~~   78 (85)
                      ..+++|||-|+|||++.+.+ |+..+|+||+||++||++.|.+||.++++.+++.+|...   +..|....    .+.++
T Consensus       345 a~StVGTPDYiAPEVll~kg-Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~----~s~eA  419 (550)
T KOG0605|consen  345 AYSTVGTPDYIAPEVLLGKG-YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVD----LSDEA  419 (550)
T ss_pred             hhcccCCccccchHHHhcCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCc----ccHHH
Confidence            45789999999999999998 999999999999999999999999999999999999763   44444444    33667


Q ss_pred             hhhhhc
Q psy13989         79 FSLIRA   84 (85)
Q Consensus        79 ~~~~~~   84 (85)
                      .|||.|
T Consensus       420 ~DLI~r  425 (550)
T KOG0605|consen  420 KDLITR  425 (550)
T ss_pred             HHHHHH
Confidence            776653

>KOG0591|consensus

Probab=99.79  E-value=2e-19  Score=97.64  Aligned_cols=77  Identities=22%  Similarity=0.307  Sum_probs=62.0

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ..+++|||+||+||++...+ |+.++|+|++||++|||..-++||.|++-.+...+|.++...|.+   .+..+..+..+
T Consensus       185 A~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p---~~~YS~~l~~l  260 (375)
T KOG0591|consen  185 AHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLP---DEHYSTDLREL  260 (375)
T ss_pred             HHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCc---HHHhhhHHHHH
Confidence            35789999999999999998 999999999999999999999999999888888888887443332   24444444443


Q ss_pred             h
Q psy13989         82 I   82 (85)
Q Consensus        82 ~   82 (85)
                      +
T Consensus       261 i  261 (375)
T KOG0591|consen  261 I  261 (375)
T ss_pred             H
Confidence            3

>KOG0033|consensus

Probab=99.78  E-value=7.1e-19  Score=94.19  Aligned_cols=80  Identities=25%  Similarity=0.321  Sum_probs=70.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ..++|||.|++||+++..+ |+..+|+|++|+++|-++.|.+||++++..+.+++|.++....+.+.|+... +++++++
T Consensus       170 ~G~~GtP~fmaPEvvrkdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is-~~Ak~Lv  247 (355)
T KOG0033|consen  170 HGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVT-PEAKSLI  247 (355)
T ss_pred             ccccCCCcccCHHHhhcCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCC-HHHHHHH
Confidence            4578999999999999888 9999999999999999999999999999999999999988888888887644 6667776


Q ss_pred             hc
Q psy13989         83 RA   84 (85)
Q Consensus        83 ~~   84 (85)
                      +|
T Consensus       248 rr  249 (355)
T KOG0033|consen  248 RR  249 (355)
T ss_pred             HH
Confidence            64

>KOG0614|consensus

Probab=99.78  E-value=5.7e-19  Score=101.93  Aligned_cols=77  Identities=23%  Similarity=0.381  Sum_probs=65.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      -+|||||.|.|||++++.+ ++..+|.|++|++++|+++|.+||.+-+++.+++.|.+++..   ..+|....+.+.+++
T Consensus       577 wTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~---i~~Pr~I~k~a~~Li  652 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK---IEFPRRITKTATDLI  652 (732)
T ss_pred             eeecCCcccccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh---hhcccccchhHHHHH
Confidence            4799999999999999998 889999999999999999999999999999999999887542   445555555555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       653 k  653 (732)
T KOG0614|consen  653 K  653 (732)
T ss_pred             H
Confidence            4

>KOG0610|consensus

Probab=99.77  E-value=1e-18  Score=98.25  Aligned_cols=80  Identities=24%  Similarity=0.399  Sum_probs=62.9

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh-hcCCCCCCCcchhchhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ-TLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~p~~~~~~~~~   80 (85)
                      +++|+||-.|.|||++.+.+ ++..+|+|.+|+++|||+.|..||.|.+...++..|.. .+..|..+.++....+.+..
T Consensus       292 SnSFVGThEYlAPEvI~G~G-HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~  370 (459)
T KOG0610|consen  292 SNSFVGTHEYLAPEVIRGEG-HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRK  370 (459)
T ss_pred             ccccccccccccceeeecCC-CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHH
Confidence            57899999999999999998 88999999999999999999999999999999888864 33333333333334444444


Q ss_pred             hh
Q psy13989         81 LI   82 (85)
Q Consensus        81 ~~   82 (85)
                      +|
T Consensus       371 LL  372 (459)
T KOG0610|consen  371 LL  372 (459)
T ss_pred             Hh
Confidence            33

>KOG0575|consensus

Probab=99.76  E-value=1.6e-18  Score=100.72  Aligned_cols=75  Identities=21%  Similarity=0.350  Sum_probs=62.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.||||.|.|||++...+ ++..+|+||+||++|.++.|++||...+-.+++.+|......     .|+..+.++.++|
T Consensus       176 ~TlCGTPNYIAPEVl~k~g-HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~-----~P~~ls~~A~dLI  249 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKSG-HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS-----MPSHLSAEAKDLI  249 (592)
T ss_pred             ceecCCCcccChhHhccCC-CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc-----cccccCHHHHHHH
Confidence            4789999999999998777 999999999999999999999999999999999999765333     3445566666665


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       250 ~  250 (592)
T KOG0575|consen  250 R  250 (592)
T ss_pred             H
Confidence            4

>KOG0696|consensus

Probab=99.75  E-value=4e-18  Score=96.90  Aligned_cols=75  Identities=23%  Similarity=0.446  Sum_probs=65.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+|||||-|+|||++...+ |+..+|+|++|+++||++.|++||.|++..+..+.|..-     ....|...++++.++|
T Consensus       508 kTFCGTPdYiAPEIi~YqP-YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh-----nvsyPKslSkEAv~ic  581 (683)
T KOG0696|consen  508 KTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH-----NVSYPKSLSKEAVAIC  581 (683)
T ss_pred             eeecCCCcccccceEEecc-cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc-----cCcCcccccHHHHHHH
Confidence            4799999999999999888 999999999999999999999999999999998888643     3457778888887776


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       582 k  582 (683)
T KOG0696|consen  582 K  582 (683)
T ss_pred             H
Confidence            4

>KOG0201|consensus

Probab=99.74  E-value=5.7e-19  Score=99.68  Aligned_cols=77  Identities=18%  Similarity=0.213  Sum_probs=62.4

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      +.+|+||++|||||++.... |+.++|+|++|+..+++.+|.+|+....+++.+..|.+.  .||  .....+++.+++|
T Consensus       168 r~tfvGTPfwMAPEVI~~~~-Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~--~PP--~L~~~~S~~~kEF  242 (467)
T KOG0201|consen  168 RKTFVGTPFWMAPEVIKQSG-YDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKS--APP--RLDGDFSPPFKEF  242 (467)
T ss_pred             cccccccccccchhhhcccc-ccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCC--CCC--ccccccCHHHHHH
Confidence            47899999999999999766 999999999999999999999999999998887777653  232  2333666666666


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      +.
T Consensus       243 V~  244 (467)
T KOG0201|consen  243 VE  244 (467)
T ss_pred             HH
Confidence            53

>KOG0588|consensus

Probab=99.73  E-value=5.9e-18  Score=99.73  Aligned_cols=77  Identities=19%  Similarity=0.233  Sum_probs=67.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.||+|.|.|||++.+.++.+.++|+|++|+++|.+++|..||.+++-...+.++.++.     ...|.+.+.+++++|
T Consensus       169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~-----f~MPs~Is~eaQdLL  243 (786)
T KOG0588|consen  169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV-----FEMPSNISSEAQDLL  243 (786)
T ss_pred             cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc-----ccCCCcCCHHHHHHH
Confidence            468999999999999999877889999999999999999999999888888888887763     445678888888888


Q ss_pred             hc
Q psy13989         83 RA   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus       244 r~  245 (786)
T KOG0588|consen  244 RR  245 (786)
T ss_pred             HH
Confidence            75

>KOG0659|consensus

Probab=99.72  E-value=2.2e-17  Score=88.94  Aligned_cols=73  Identities=58%  Similarity=1.174  Sum_probs=67.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhch
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGV   75 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~   75 (85)
                      ++.+.|.||.|||.+.+...|+..+|+|+.||++-|++.+.+.|.|.++.+++..|.+.++.|.+..||+..+
T Consensus       159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~  231 (318)
T KOG0659|consen  159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTS  231 (318)
T ss_pred             ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccc
Confidence            4457899999999999988899999999999999999999999999999999999999999999999997543

>KOG0592|consensus

Probab=99.71  E-value=2e-17  Score=95.60  Aligned_cols=79  Identities=20%  Similarity=0.345  Sum_probs=62.6

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      +.+|+||..|.+||++.... .+..+|+|++||++|+|+.|.+||.+.++..++++|.......+ +.+|....+.+..+
T Consensus       244 ~~SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp-~~fp~~a~dLv~KL  321 (604)
T KOG0592|consen  244 RSSFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP-EGFPEDARDLIKKL  321 (604)
T ss_pred             ccceeeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC-CCCCHHHHHHHHHH
Confidence            36799999999999998876 77889999999999999999999999999999999987644332 23444444444333


Q ss_pred             h
Q psy13989         82 I   82 (85)
Q Consensus        82 ~   82 (85)
                      |
T Consensus       322 L  322 (604)
T KOG0592|consen  322 L  322 (604)
T ss_pred             H
Confidence            3

>KOG0581|consensus

Probab=99.71  E-value=7.6e-18  Score=93.41  Aligned_cols=79  Identities=24%  Similarity=0.356  Sum_probs=62.5

Q ss_pred             CCCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC-----ChHHHHHHHHhhcCCCCCCCcch-hc
Q psy13989          1 MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE-----SDLDQLTRIFQTLGTPSEDTWPT-AG   74 (85)
Q Consensus         1 ~~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~~p~-~~   74 (85)
                      ++++|+||..||+||.+.+.. |+.+.|+||+|+.++|+..|..||...     +..+.+..|.   ..| ++..|+ .+
T Consensus       233 ~a~tfvGT~~YMsPERi~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv---~~p-pP~lP~~~f  307 (364)
T KOG0581|consen  233 IANTFVGTSAYMSPERISGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV---DEP-PPRLPEGEF  307 (364)
T ss_pred             hcccccccccccChhhhcCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh---cCC-CCCCCcccC
Confidence            468999999999999999887 999999999999999999999999774     3444444443   334 344565 49


Q ss_pred             hhhhhhhhhc
Q psy13989         75 VKGLFSLIRA   84 (85)
Q Consensus        75 ~~~~~~~~~~   84 (85)
                      ++++.+|+.+
T Consensus       308 S~ef~~FV~~  317 (364)
T KOG0581|consen  308 SPEFRSFVSC  317 (364)
T ss_pred             CHHHHHHHHH
Confidence            9999998753

>KOG0595|consensus

Probab=99.70  E-value=2.7e-17  Score=92.38  Aligned_cols=60  Identities=23%  Similarity=0.400  Sum_probs=54.1

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ..+.||++.|||||++.... |+.++|+|++|+++|++++|..||...++.+.+..+.++.
T Consensus       171 a~tlcGSplYMAPEV~~~~~-YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~  230 (429)
T KOG0595|consen  171 AETLCGSPLYMAPEVIMSQQ-YDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGN  230 (429)
T ss_pred             HHHhhCCccccCHHHHHhcc-ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccc
Confidence            45789999999999998776 9999999999999999999999999999998888776643

>KOG0660|consensus

Probab=99.69  E-value=3.7e-17  Score=90.52  Aligned_cols=80  Identities=35%  Similarity=0.624  Sum_probs=69.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      |..+.|.||.|||++.....|+...|+||+||++.|+++|++.|.|.+..+++..|...++.|++..+....++.+.+.+
T Consensus       185 TeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi  264 (359)
T KOG0660|consen  185 TEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYI  264 (359)
T ss_pred             hcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHH
Confidence            45678999999999988777999999999999999999999999999999999999999999887776666555555444

>KOG0597|consensus

Probab=99.69  E-value=3.1e-17  Score=95.90  Aligned_cols=75  Identities=24%  Similarity=0.428  Sum_probs=59.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++..|||.|||||++.+.. |+..+|+|++||++||+..|++||....-......|...     +..||...+..+.+|+
T Consensus       158 tsikGtPlYmAPElv~e~p-yd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d-----~v~~p~~~S~~f~nfl  231 (808)
T KOG0597|consen  158 TSIKGTPLYMAPELVEEQP-YDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD-----PVKPPSTASSSFVNFL  231 (808)
T ss_pred             eeccCcccccCHHHHcCCC-ccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC-----CCCCcccccHHHHHHH
Confidence            4567999999999999777 999999999999999999999999876655554445433     4445667777777766


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      .
T Consensus       232 ~  232 (808)
T KOG0597|consen  232 Q  232 (808)
T ss_pred             H
Confidence            3

>KOG0583|consensus

Probab=99.68  E-value=1.3e-16  Score=90.40  Aligned_cols=78  Identities=24%  Similarity=0.235  Sum_probs=62.6

Q ss_pred             CCCccccccccCchhhhccc-cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc-hhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG-VKGLF   79 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~-~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~-~~~~~   79 (85)
                      ..++|||+.|+|||++.+.. +.+..+|+||+|+++|.++.|..||...+....+.+|.++     ...+|... +.++.
T Consensus       178 l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~-----~~~~p~~~~S~~~~  252 (370)
T KOG0583|consen  178 LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG-----EFKIPSYLLSPEAR  252 (370)
T ss_pred             ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC-----CccCCCCcCCHHHH
Confidence            46789999999999998876 5668999999999999999999999998888888776554     23345545 67777


Q ss_pred             hhhhc
Q psy13989         80 SLIRA   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus       253 ~Li~~  257 (370)
T KOG0583|consen  253 SLIEK  257 (370)
T ss_pred             HHHHH
Confidence            66653

>KOG0574|consensus

Probab=99.68  E-value=8.4e-18  Score=92.56  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=70.2

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      +++.+|||.|||||++..-+ |+..+|+||+|+...++..|++||.+..+++++..|...  +||....|+.+++++-||
T Consensus       186 RNTVIGTPFWMAPEVI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~--PPPTF~KPE~WS~~F~DF  262 (502)
T KOG0574|consen  186 RNTVIGTPFWMAPEVIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTK--PPPTFKKPEEWSSEFNDF  262 (502)
T ss_pred             hCccccCcccccHHHHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCC--CCCCCCChHhhhhHHHHH
Confidence            68899999999999998887 999999999999999999999999998888887666543  566677899999999999


Q ss_pred             hhc
Q psy13989         82 IRA   84 (85)
Q Consensus        82 ~~~   84 (85)
                      ++.
T Consensus       263 i~~  265 (502)
T KOG0574|consen  263 IRS  265 (502)
T ss_pred             HHH
Confidence            863

>KOG0667|consensus

Probab=99.67  E-value=4.1e-17  Score=95.36  Aligned_cols=66  Identities=38%  Similarity=0.816  Sum_probs=61.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      +.+.+++|.|||++++.+ |+...|+||+||++.|+.+|.+.|.|++..+++.+|.+.+|.|++..+
T Consensus       347 tYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL  412 (586)
T KOG0667|consen  347 TYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKML  412 (586)
T ss_pred             eeeeccccccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            457789999999999998 999999999999999999999999999999999999999998877544

>KOG0594|consensus

Probab=99.67  E-value=2.2e-16  Score=87.12  Aligned_cols=73  Identities=41%  Similarity=0.910  Sum_probs=68.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhch
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGV   75 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~   75 (85)
                      ++.++|.+|.|||++.+...|+..+|+|++||++.|++++.+.|.|.+..+++.+|...++.|.+..||...+
T Consensus       178 t~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~  250 (323)
T KOG0594|consen  178 TPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSS  250 (323)
T ss_pred             cccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccc
Confidence            5778999999999999987799999999999999999999999999999999999999999999999997553

>KOG0690|consensus

Probab=99.67  E-value=1.3e-16  Score=88.61  Aligned_cols=74  Identities=19%  Similarity=0.312  Sum_probs=63.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+|||||.|.|||++-..- |+..+|+|.+|+++|+|..|+.||...++...+..|...     ...+|...++++++++
T Consensus       326 kTFCGTPEYLAPEVleDnD-YgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e-----d~kFPr~ls~eAktLL  399 (516)
T KOG0690|consen  326 KTFCGTPEYLAPEVLEDND-YGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME-----DLKFPRTLSPEAKTLL  399 (516)
T ss_pred             ccccCChhhcCchhhcccc-ccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-----hccCCccCCHHHHHHH
Confidence            5799999999999998887 999999999999999999999999999998888888654     3445666667766665

>KOG0661|consensus

Probab=99.66  E-value=2.9e-16  Score=89.86  Aligned_cols=72  Identities=40%  Similarity=0.824  Sum_probs=67.5

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      .|.++.|+||+|||+++....|+.++|+|++||+++|+.+-++.|+|.+..+++.+|...+|.|....|++.
T Consensus       166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg  237 (538)
T KOG0661|consen  166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG  237 (538)
T ss_pred             cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH
Confidence            467889999999999988877999999999999999999999999999999999999999999999999874

>KOG0579|consensus

Probab=99.63  E-value=6.7e-16  Score=91.88  Aligned_cols=81  Identities=17%  Similarity=0.293  Sum_probs=68.9

Q ss_pred             CCCccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhh
Q psy13989          2 QNWKKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~   77 (85)
                      +.+|+|||+|||||++.+    ..+|+.++|+||+|+.+.+|..+.+|....++++++-+|.+.  .||...-|..++..
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS--ePPTLlqPS~Ws~~  264 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPTLLQPSHWSRS  264 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc--CCCcccCcchhhhH
Confidence            578999999999999753    234999999999999999999999999999999999888664  56666678888888


Q ss_pred             hhhhhhc
Q psy13989         78 LFSLIRA   84 (85)
Q Consensus        78 ~~~~~~~   84 (85)
                      +.|||.+
T Consensus       265 F~DfLk~  271 (1187)
T KOG0579|consen  265 FSDFLKR  271 (1187)
T ss_pred             HHHHHHH
Confidence            8888864

>KOG0663|consensus

Probab=99.62  E-value=1.4e-15  Score=84.36  Aligned_cols=74  Identities=49%  Similarity=0.912  Sum_probs=68.3

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhch
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGV   75 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~   75 (85)
                      .|..+.|.||.|||.+++...|+..+|+||+||++-+++.+.+.|.|....+++.+|.+.++.|....||....
T Consensus       234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~  307 (419)
T KOG0663|consen  234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE  307 (419)
T ss_pred             CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence            35678899999999999988899999999999999999999999999999999999999999999999986543

>KOG0577|consensus

Probab=99.62  E-value=4.1e-16  Score=91.93  Aligned_cols=60  Identities=27%  Similarity=0.378  Sum_probs=55.1

Q ss_pred             CCCccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          2 QNWKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      .++|+|||+||||||++.  .+.|+.++|+||+|+...++....+|+.+++.+.++..|.++
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN  240 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  240 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc
Confidence            579999999999999874  445999999999999999999999999999999999999876

>KOG0615|consensus

Probab=99.62  E-value=2.2e-17  Score=93.09  Aligned_cols=80  Identities=20%  Similarity=0.304  Sum_probs=60.7

Q ss_pred             CCccccccccCchhhhccc--cCCchhHHHhHHHHHHHHHHcCCCCCCCChHH-HHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGAR--MYGVGIDMWAVGCIICELLLKAPFLPGESDLD-QLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~--~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      .++|||+.|.|||++.+.+  .++.++|+||+||++|.+++|.+||.+..... ..++|.++....-++.|.+ .+.+.+
T Consensus       336 ~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~-Iseea~  414 (475)
T KOG0615|consen  336 KTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDR-ISEEAL  414 (475)
T ss_pred             hhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhh-hhHHHH
Confidence            4799999999999997654  25568899999999999999999998875443 6677777665555555543 446666


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      +||+
T Consensus       415 dlI~  418 (475)
T KOG0615|consen  415 DLIN  418 (475)
T ss_pred             HHHH
Confidence            6664

>KOG0580|consensus

Probab=99.61  E-value=1.8e-15  Score=80.58  Aligned_cols=77  Identities=21%  Similarity=0.325  Sum_probs=64.1

Q ss_pred             CCCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          1 MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         1 ~~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      .+++.|||.-|.+||++.+.. ++..+|+|++|++.++++.|.+||.+.+..+++++|.+...     .+|...+..+.|
T Consensus       178 kR~tlcgt~dyl~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~-----~~p~~is~~a~d  251 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL-----KFPSTISGGAAD  251 (281)
T ss_pred             CceeeecccccCCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc-----cCCcccChhHHH
Confidence            367899999999999999988 89999999999999999999999999999999999977532     234555555555


Q ss_pred             hhh
Q psy13989         81 LIR   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +|.
T Consensus       252 lI~  254 (281)
T KOG0580|consen  252 LIS  254 (281)
T ss_pred             HHH
Confidence            554

>KOG0658|consensus

Probab=99.61  E-value=4.4e-16  Score=86.45  Aligned_cols=70  Identities=40%  Similarity=0.803  Sum_probs=63.7

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      +.+...|++|.|||.+.+...|+.+.|+||.||++.|++.|++.|.|++..+++..|++.+|.|..+++.
T Consensus       182 niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~  251 (364)
T KOG0658|consen  182 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK  251 (364)
T ss_pred             ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence            3466778999999999998889999999999999999999999999999999999999999988876654

>KOG0032|consensus

Probab=99.61  E-value=2.6e-15  Score=85.36  Aligned_cols=80  Identities=25%  Similarity=0.439  Sum_probs=68.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...|||+.|+|||++.... |+..+|+|++|+++|.++.|.+||.+++.......|..+....+.+.|+.. +..+.+|+
T Consensus       196 ~~~~Gtp~y~APEvl~~~~-y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~i-s~~akd~i  273 (382)
T KOG0032|consen  196 HTIVGTPEYVAPEVLGGRP-YGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDI-SESAKDFI  273 (382)
T ss_pred             eeecCCccccCchhhcCCC-CCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcccc-CHHHHHHH
Confidence            4578999999999998777 999999999999999999999999999998888888887666777777766 67777777


Q ss_pred             hc
Q psy13989         83 RA   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus       274 ~~  275 (382)
T KOG0032|consen  274 RK  275 (382)
T ss_pred             HH
Confidence            64

>KOG0600|consensus

Probab=99.60  E-value=1.4e-15  Score=87.60  Aligned_cols=70  Identities=44%  Similarity=0.953  Sum_probs=66.0

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      .|+.+.|.||.+||.+++...|+..+|+||+||++.|++.|.+.|+|.+..+++++|.+.-+.|.+..|+
T Consensus       276 ~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~  345 (560)
T KOG0600|consen  276 YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP  345 (560)
T ss_pred             cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence            4677889999999999998889999999999999999999999999999999999999999999998888

>KOG0589|consensus

Probab=99.59  E-value=3.1e-15  Score=85.37  Aligned_cols=82  Identities=20%  Similarity=0.331  Sum_probs=69.8

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      +.+.+||++|++||++.+.+ |+.+.|+|++||.+|+++.-+..|.+.+-.....+|......|.+..+.......+.++
T Consensus       163 a~tvvGTp~YmcPEil~d~p-Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~  241 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSDIP-YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSM  241 (426)
T ss_pred             hheecCCCcccCHHHhCCCC-CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHH
Confidence            56789999999999999988 99999999999999999999999999998888888988887777776666665556555


Q ss_pred             hhc
Q psy13989         82 IRA   84 (85)
Q Consensus        82 ~~~   84 (85)
                      +++
T Consensus       242 l~~  244 (426)
T KOG0589|consen  242 LRK  244 (426)
T ss_pred             hhc
Confidence            543

>KOG0593|consensus

Probab=99.58  E-value=1.9e-15  Score=83.03  Aligned_cols=66  Identities=42%  Similarity=0.726  Sum_probs=59.0

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      .|-++.|+||.|||.+.+...|+..+|+|++||++.|+++|.+.|+|.++.+++..|...++...+
T Consensus       158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~p  223 (396)
T KOG0593|consen  158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIP  223 (396)
T ss_pred             hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCH
Confidence            356778999999999998666999999999999999999999999999999999999888776544

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.57  E-value=1.2e-14  Score=82.05  Aligned_cols=56  Identities=21%  Similarity=0.459  Sum_probs=50.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +.+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+.++..
T Consensus       195 ~~~Gt~~Y~aPE~~~~~~-~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~  250 (363)
T cd05628         195 STVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMN  250 (363)
T ss_pred             cccCCccccCHHHHcCCC-CCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            468999999999998776 88899999999999999999999999888888777764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0695|consensus

Probab=99.55  E-value=2.1e-14  Score=80.46  Aligned_cols=83  Identities=18%  Similarity=0.304  Sum_probs=57.4

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC-------CCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP-------GESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      .++|||||.|.|||++.+.. |+..+|+|++|+++++|..|+.||.       .++..+.+.+++-...--.+...+-..
T Consensus       408 tstfcgtpnyiapeilrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvka  486 (593)
T KOG0695|consen  408 TSTFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKA  486 (593)
T ss_pred             cccccCCCcccchhhhcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhh
Confidence            57899999999999999887 9999999999999999999999993       222333344433221111122233445


Q ss_pred             hhhhhhhhhcC
Q psy13989         75 VKGLFSLIRAG   85 (85)
Q Consensus        75 ~~~~~~~~~~~   85 (85)
                      +..++.|++++
T Consensus       487 s~vlkgflnkd  497 (593)
T KOG0695|consen  487 SHVLKGFLNKD  497 (593)
T ss_pred             HHHHHHhhcCC
Confidence            55666676653

>PTZ00284 protein kinase; Provisional

Probab=99.55  E-value=2e-14  Score=83.49  Aligned_cols=63  Identities=27%  Similarity=0.512  Sum_probs=54.4

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++||++|++++|..||.+.+..+.+..+...++.++
T Consensus       303 ~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p  365 (467)
T PTZ00284        303 TAIVSTRHYRSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLP  365 (467)
T ss_pred             ccccCCccccCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCC
Confidence            3568999999999998877 88999999999999999999999999888888877777665443

>KOG4721|consensus

Probab=99.55  E-value=1.2e-15  Score=89.68  Aligned_cols=74  Identities=19%  Similarity=0.193  Sum_probs=55.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh-hcCCCCCCCcchhchhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ-TLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~p~~~~~~   77 (85)
                      .+|+||..|||||++.+.+ .+.++|+|++|+++|+|++|..||.+-+..-++.-+.. .+-.|-+.++|+-+.-.
T Consensus       269 MSFaGTVaWMAPEvIrneP-csEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL  343 (904)
T KOG4721|consen  269 MSFAGTVAWMAPEVIRNEP-CSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLL  343 (904)
T ss_pred             hhhhhhHhhhCHHHhhcCC-cccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHH
Confidence            3799999999999999988 99999999999999999999999987655444333322 23345556666655333

>KOG0197|consensus

Probab=99.55  E-value=9e-15  Score=84.07  Aligned_cols=71  Identities=23%  Similarity=0.337  Sum_probs=63.6

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ..|+|||.+.... |+.++|+||+|+++||+.+ |+.|+.+.+..+.++++.++.+.|.|..+|...-..+..
T Consensus       368 IkWtAPEa~~~~~-FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~  439 (468)
T KOG0197|consen  368 IKWTAPEALNYGK-FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKS  439 (468)
T ss_pred             ceecCHHHHhhCC-cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHH
Confidence            3599999998888 9999999999999999998 999999999999999999999999999988776654443

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.55  E-value=3e-14  Score=82.38  Aligned_cols=62  Identities=47%  Similarity=0.880  Sum_probs=52.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      +.+||+.|+|||++.+...++.++|+||+|++++++++|.+||.+.+....+.++.+..+.|
T Consensus       229 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p  290 (440)
T PTZ00036        229 SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTP  290 (440)
T ss_pred             cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            45789999999998765448899999999999999999999999998888887777655544

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.54  E-value=2e-14  Score=80.11  Aligned_cols=57  Identities=25%  Similarity=0.462  Sum_probs=49.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+...
T Consensus       160 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~  216 (323)
T cd05616         160 TFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH  216 (323)
T ss_pred             cCCCChhhcCHHHhcCCC-CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            467899999999998776 888999999999999999999999998887777776543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.53  E-value=1.4e-14  Score=82.31  Aligned_cols=56  Identities=25%  Similarity=0.480  Sum_probs=48.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +.+||+.|+|||++.+.. ++..+|+|++||+++++++|..||.+.++......+..
T Consensus       207 ~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  262 (382)
T cd05625         207 SLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVIN  262 (382)
T ss_pred             ccccCcccCCHHHhcCCC-CCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            467999999999998776 88899999999999999999999999887776666554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG4717|consensus

Probab=99.52  E-value=2.4e-14  Score=83.67  Aligned_cols=76  Identities=28%  Similarity=0.407  Sum_probs=64.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      +++||+..|-|||++++..+....+|+|++|+++|-++.|++||...++.+++.+|.-.     .-.+|...++++.|+|
T Consensus       176 ~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC-----KYtvPshvS~eCrdLI  250 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC-----KYTVPSHVSKECRDLI  250 (864)
T ss_pred             hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc-----cccCchhhhHHHHHHH
Confidence            67899999999999999875667889999999999999999999999999999998654     3346677777777776


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      .
T Consensus       251 ~  251 (864)
T KOG4717|consen  251 Q  251 (864)
T ss_pred             H
Confidence            4

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.52  E-value=2.6e-14  Score=81.21  Aligned_cols=56  Identities=23%  Similarity=0.424  Sum_probs=48.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +++||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+.++......+..
T Consensus       207 ~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~  262 (381)
T cd05626         207 SLVGTPNYIAPEVLLRKG-YTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVIN  262 (381)
T ss_pred             cccCCccccCHHHHcCCC-CCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHc
Confidence            568999999999998776 88899999999999999999999988877666555543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0986|consensus

Probab=99.52  E-value=1.9e-14  Score=82.63  Aligned_cols=78  Identities=15%  Similarity=0.238  Sum_probs=58.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||..|||||++.+.. |+..+|+|++||++|+|+.|..||.......-..-+.+-. ...+...|+.+++++.++|+
T Consensus       345 ~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~-~~~~~ey~~kFS~eakslc~  422 (591)
T KOG0986|consen  345 GRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRT-LEDPEEYSDKFSEEAKSLCE  422 (591)
T ss_pred             cccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHH-hcchhhcccccCHHHHHHHH
Confidence            348999999999999888 9999999999999999999999997654332221121110 12356678888888888875

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.52  E-value=9.1e-14  Score=76.35  Aligned_cols=68  Identities=41%  Similarity=0.879  Sum_probs=56.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ..+++.|+|||++.+...++.++|+|++|++++++++|..||.+.+..+.+..+.+..+.++...|+.
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd07871         163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG  230 (288)
T ss_pred             ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc
Confidence            45788999999987644488899999999999999999999999988888888877777666665554

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0198|consensus

Probab=99.51  E-value=2.1e-15  Score=83.60  Aligned_cols=78  Identities=21%  Similarity=0.309  Sum_probs=59.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC-CChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG-ESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++.||+.|||||++.........+|+|++||++.+|++|.+||.. ......+.++...   ...+.+|...+.++.+||
T Consensus       180 ~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~---~~~P~ip~~ls~~a~~Fl  256 (313)
T KOG0198|consen  180 SVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE---DSLPEIPDSLSDEAKDFL  256 (313)
T ss_pred             cccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc---CCCCCCCcccCHHHHHHH
Confidence            578999999999998632133489999999999999999999987 4444444444332   233478888999999998


Q ss_pred             hc
Q psy13989         83 RA   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus       257 ~~  258 (313)
T KOG0198|consen  257 RK  258 (313)
T ss_pred             HH
Confidence            75

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=8.2e-14  Score=76.66  Aligned_cols=74  Identities=20%  Similarity=0.284  Sum_probs=56.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+....     ..+|...+..+.++++
T Consensus       157 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~li~  230 (291)
T cd05612         157 TLCGTPEYLAPEVIQSKG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK-----LEFPRHLDLYAKDLIK  230 (291)
T ss_pred             cccCChhhcCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----cCCCccCCHHHHHHHH
Confidence            356899999999987776 8889999999999999999999999988877777765542     2233334455555544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0599|consensus

Probab=99.50  E-value=2.9e-14  Score=77.86  Aligned_cols=79  Identities=22%  Similarity=0.272  Sum_probs=64.0

Q ss_pred             CccccccccCchhhhcc-----ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          4 WKKVRKAFMAPELLFGA-----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      ..||||.|.|||.+...     +.|+..+|.|++|+++|.++.|.+||+-....-++..|.++......+.|.+.. ...
T Consensus       181 elCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis-~~~  259 (411)
T KOG0599|consen  181 ELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADIS-ATV  259 (411)
T ss_pred             HhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhcc-ccH
Confidence            47999999999998642     338889999999999999999999999888888888888887777777776533 455


Q ss_pred             hhhhh
Q psy13989         79 FSLIR   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      +|+|+
T Consensus       260 KdLIs  264 (411)
T KOG0599|consen  260 KDLIS  264 (411)
T ss_pred             HHHHH
Confidence            55554

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.50  E-value=1e-13  Score=76.02  Aligned_cols=67  Identities=39%  Similarity=0.865  Sum_probs=55.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ...|++.|+|||++.+.. ++.++|+|++|++++++++|.+||.+.+..+.+..+....+.+.+..|+
T Consensus       168 ~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~  234 (290)
T cd07862         168 SVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  234 (290)
T ss_pred             cccccccccChHHHhCCC-CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence            456899999999987766 8888999999999999999999999998888888887766655554444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0587|consensus

Probab=99.50  E-value=4.7e-15  Score=89.67  Aligned_cols=81  Identities=23%  Similarity=0.272  Sum_probs=67.9

Q ss_pred             CCCccccccccCchhhhcc----ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhh
Q psy13989          2 QNWKKVRKAFMAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~   77 (85)
                      +++++||++|||||++...    ..|+..+|+|++|+...++..|.+|+.++.++.++.+|...  +||...-|+.++++
T Consensus       180 RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRN--PPPkLkrp~kWs~~  257 (953)
T KOG0587|consen  180 RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--PPPKLKRPKKWSKK  257 (953)
T ss_pred             ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCC--CCccccchhhHHHH
Confidence            5789999999999999753    23788999999999999999999999999999988776554  44445569999999


Q ss_pred             hhhhhhc
Q psy13989         78 LFSLIRA   84 (85)
Q Consensus        78 ~~~~~~~   84 (85)
                      +.+||..
T Consensus       258 FndFIs~  264 (953)
T KOG0587|consen  258 FNDFIST  264 (953)
T ss_pred             HHHHHHH
Confidence            9999863

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.50  E-value=8.6e-14  Score=77.44  Aligned_cols=57  Identities=25%  Similarity=0.525  Sum_probs=48.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  210 (316)
T cd05592         154 STFCGTPDYIAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN  210 (316)
T ss_pred             ccccCCccccCHHHHcCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            3467999999999998776 88889999999999999999999999887777666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0604|consensus

Probab=99.49  E-value=2.3e-14  Score=78.83  Aligned_cols=78  Identities=26%  Similarity=0.330  Sum_probs=62.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh----HHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD----LDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      +-|-||+|.|||++-..+ |+..+|+||+|+++|.++.|.+||++...    ..+-.+|..+...+|.++|++. ++.++
T Consensus       222 TPc~TPyYvaPevlg~eK-ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~V-Se~aK  299 (400)
T KOG0604|consen  222 TPCFTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCV-SEAAK  299 (400)
T ss_pred             CCcccccccCHHHhCchh-cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHH-HHHHH
Confidence            457899999999987777 99999999999999999999999987653    3556677777778888888764 35555


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      |+|+
T Consensus       300 dlIR  303 (400)
T KOG0604|consen  300 DLIR  303 (400)
T ss_pred             HHHH
Confidence            5554

>KOG0671|consensus

Probab=99.49  E-value=1.8e-15  Score=84.71  Aligned_cols=64  Identities=23%  Similarity=0.532  Sum_probs=57.4

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      ++.+.|..|.|||++.+.+ ++..+|+||+||+++|+.+|...|++.++.+.++++...+++.|.
T Consensus       267 s~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~  330 (415)
T KOG0671|consen  267 STIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPS  330 (415)
T ss_pred             ceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcH
Confidence            4567899999999999998 999999999999999999999999999988988888888885444

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.49  E-value=1.1e-13  Score=77.23  Aligned_cols=74  Identities=24%  Similarity=0.438  Sum_probs=56.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+.+....+..+....     ..+|...+.++.++++
T Consensus       160 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~li~  233 (324)
T cd05587         160 TFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN-----VSYPKSLSKEAVSICK  233 (324)
T ss_pred             eecCCccccChhhhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCHHHHHHHH
Confidence            356899999999998776 8888999999999999999999999888777776665432     2233344455555543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0192|consensus

Probab=99.49  E-value=1.7e-13  Score=77.57  Aligned_cols=57  Identities=21%  Similarity=0.275  Sum_probs=49.0

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...||..|||||++.+  .. |+.++|+||+|+++|+++++..||.+..+......+...
T Consensus       203 ~~~GT~~wMAPEv~~~~~~~-~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~  261 (362)
T KOG0192|consen  203 SVAGTYRWMAPEVLRGEKSP-YTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG  261 (362)
T ss_pred             CCCCCccccChhhhcCCCCc-CCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            3679999999999984  45 999999999999999999999999999886666666543

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.49  E-value=9.6e-14  Score=77.35  Aligned_cols=57  Identities=26%  Similarity=0.452  Sum_probs=49.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+.+.......+...
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~  211 (320)
T cd05590         155 TFCGTPDYIAPEILQEML-YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND  211 (320)
T ss_pred             ccccCccccCHHHHcCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence            457899999999987766 888899999999999999999999998887777776543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=3.1e-14  Score=80.72  Aligned_cols=56  Identities=25%  Similarity=0.491  Sum_probs=48.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +.+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+..
T Consensus       207 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  262 (377)
T cd05629         207 STVGTPDYIAPEIFLQQG-YGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIIN  262 (377)
T ss_pred             ccCCCccccCHHHHccCC-CCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            468999999999987766 88899999999999999999999998887777666654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.48  E-value=2.9e-13  Score=79.36  Aligned_cols=68  Identities=19%  Similarity=0.234  Sum_probs=54.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      +.+||+.|+|||++.+.. ++.+.|+|++|+++|++++|..||.+.+....+..+......+.+...+.
T Consensus       204 ~~~Gt~~Y~aPE~~~~~~-~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (496)
T PTZ00283        204 TFCGTPYYVAPEIWRRKP-YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISP  271 (496)
T ss_pred             cccCCcceeCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCH
Confidence            467999999999998776 88999999999999999999999998887777777665443333333333

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.48  E-value=5.3e-14  Score=79.05  Aligned_cols=57  Identities=25%  Similarity=0.424  Sum_probs=49.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +.+||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+.++......+...
T Consensus       187 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~  243 (340)
T PTZ00426        187 TLCGTPEYIAPEILLNVG-HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG  243 (340)
T ss_pred             eecCChhhcCHHHHhCCC-CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC
Confidence            457899999999998766 788899999999999999999999998887777777654

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=6.6e-14  Score=77.72  Aligned_cols=74  Identities=24%  Similarity=0.390  Sum_probs=56.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+...     +..+|...+..+.++++
T Consensus       152 ~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~  225 (312)
T cd05585         152 TFCGTPEYLAPELLLGHG-YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE-----PLRFPDGFDRDAKDLLI  225 (312)
T ss_pred             cccCCcccCCHHHHcCCC-CCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC-----CCCCCCcCCHHHHHHHH
Confidence            457999999999998776 888899999999999999999999988877766665543     22234444455555553

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.48  E-value=1.8e-13  Score=76.40  Aligned_cols=56  Identities=27%  Similarity=0.507  Sum_probs=48.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+.+.......+..
T Consensus       160 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~  215 (323)
T cd05615         160 TFCGTPDYIAPEIIAYQP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME  215 (323)
T ss_pred             CccCCccccCHHHHcCCC-CCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            456899999999987766 88899999999999999999999998887777766654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=6.4e-14  Score=79.07  Aligned_cols=56  Identities=21%  Similarity=0.468  Sum_probs=48.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +.+||+.|+|||++.... ++.++|+|++|++++++++|..||.+.+.......+..
T Consensus       198 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~  253 (364)
T cd05599         198 STVGTPDYIAPEVFLQTG-YNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIIN  253 (364)
T ss_pred             ccccCccccCHHHHcCCC-CCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHc
Confidence            457999999999987776 88899999999999999999999999888777766654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.48  E-value=1.6e-13  Score=76.49  Aligned_cols=57  Identities=26%  Similarity=0.522  Sum_probs=49.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+|++.|+|||++.+.. ++.++|+|++|+++|++++|..||.+.+.......+...
T Consensus       160 ~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~  216 (324)
T cd05589         160 TFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND  216 (324)
T ss_pred             ccccCccccCHhHhcCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            467899999999987766 888899999999999999999999988877777666543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.48  E-value=2e-13  Score=76.04  Aligned_cols=56  Identities=23%  Similarity=0.519  Sum_probs=47.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+.+.......+..
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~  210 (316)
T cd05619         155 TFCGTPDYIAPEILLGQK-YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM  210 (316)
T ss_pred             eecCCccccCHHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            456899999999987776 88899999999999999999999998887776666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.47  E-value=1.7e-13  Score=76.31  Aligned_cols=74  Identities=20%  Similarity=0.390  Sum_probs=55.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+...     .+..|...+.++.++++
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~  228 (316)
T cd05620         155 TFCGTPDYIAPEILQGLK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD-----TPHYPRWITKESKDILE  228 (316)
T ss_pred             ccCCCcCccCHHHHcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----CCCCCCCCCHHHHHHHH
Confidence            467899999999998776 888999999999999999999999988876666555432     12223334455555543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.47  E-value=2e-13  Score=70.29  Aligned_cols=46  Identities=28%  Similarity=0.429  Sum_probs=40.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ..||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.....
T Consensus        64 ~~g~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~p~~~~~~  109 (176)
T smart00750       64 SRVDPYFMAPEVIQGQS-YTEKADIYSLGITLYEALDYELPYNEERE  109 (176)
T ss_pred             CCCcccccChHHhcCCC-CcchhhHHHHHHHHHHHHhCCCCccccch
Confidence            36889999999998876 88999999999999999999999976544

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.47  E-value=5.8e-14  Score=78.49  Aligned_cols=57  Identities=18%  Similarity=0.380  Sum_probs=49.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+.++...+..+...
T Consensus       174 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~  230 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG  230 (329)
T ss_pred             eecCChhhcCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC
Confidence            457899999999998776 788999999999999999999999988887777776543

>KOG0196|consensus

Probab=99.47  E-value=9.5e-15  Score=87.95  Aligned_cols=75  Identities=19%  Similarity=0.239  Sum_probs=69.0

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhhc
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIRA   84 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~   84 (85)
                      .-|+|||.+...+ +....|+||+|+++||..+ |..||+.+++.+.+..|.++++.|+|.++|.-..+.+.|..++
T Consensus       798 iRWTAPEAIa~RK-FTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqk  873 (996)
T KOG0196|consen  798 IRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQK  873 (996)
T ss_pred             eeecChhHhhhcc-cCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHH
Confidence            3599999999888 9999999999999999876 9999999999999999999999999999999888888887665

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.47  E-value=5.2e-14  Score=78.47  Aligned_cols=74  Identities=19%  Similarity=0.279  Sum_probs=55.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+....     ..+|...+.++.++|+
T Consensus       154 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~~li~  227 (323)
T cd05571         154 TFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE-----IRFPRTLSPEAKSLLA  227 (323)
T ss_pred             ceecCccccChhhhcCCC-CCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCHHHHHHHH
Confidence            457999999999987776 8889999999999999999999998887766666554331     2233444555555553

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4279|consensus

Probab=99.46  E-value=1.3e-14  Score=87.21  Aligned_cols=80  Identities=20%  Similarity=0.259  Sum_probs=60.9

Q ss_pred             CCCccccccccCchhhhc-cccCCchhHHHhHHHHHHHHHHcCCCCCCC-ChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFG-ARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~-~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      .-+|.||..|||||++-. ...|+..+|+||+||.+.||.+|++||... ++.-++.++.   ..-..+.+|+..+.+++
T Consensus       733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG---myKvHP~iPeelsaeak  809 (1226)
T KOG4279|consen  733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG---MYKVHPPIPEELSAEAK  809 (1226)
T ss_pred             ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc---ceecCCCCcHHHHHHHH
Confidence            357889999999999853 334999999999999999999999999654 3444444432   22334567889999999


Q ss_pred             hhhhc
Q psy13989         80 SLIRA   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +||.+
T Consensus       810 ~Filr  814 (1226)
T KOG4279|consen  810 NFILR  814 (1226)
T ss_pred             HHHHH
Confidence            99864

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.46  E-value=1.2e-13  Score=76.94  Aligned_cols=57  Identities=25%  Similarity=0.505  Sum_probs=49.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+.+....+..+...
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~  211 (321)
T cd05591         155 TFCGTPDYIAPEILQELE-YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD  211 (321)
T ss_pred             ccccCccccCHHHHcCCC-CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            457899999999987766 888899999999999999999999998888777776543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.46  E-value=1.5e-13  Score=76.70  Aligned_cols=74  Identities=22%  Similarity=0.378  Sum_probs=55.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+....     ..+|...+..+.++++
T Consensus       159 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~  232 (323)
T cd05584         159 TFCGTIEYMAPEILMRSG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK-----LNLPPYLTPEARDLLK  232 (323)
T ss_pred             ccCCCccccChhhccCCC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCHHHHHHHH
Confidence            457899999999987766 7888999999999999999999999888777776665432     1233334445555543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0608|consensus

Probab=99.46  E-value=2.7e-14  Score=85.04  Aligned_cols=81  Identities=20%  Similarity=0.270  Sum_probs=63.2

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ..+.+||+.|+|||++...+ |+..+|+|+.|+++++|+-|++||....+.++..+|+.. +.......-...++++.++
T Consensus       828 ahslvgt~nyiapevl~r~g-~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw-~~~l~~~~~~~ls~e~~~l  905 (1034)
T KOG0608|consen  828 AHSLVGTPNYIAPEVLARTG-YTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINW-RNFLHIPYQGNLSKEALDL  905 (1034)
T ss_pred             hhhhcCCCcccChHHhcccC-ccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeeh-hhccccccccccCHHHHHH
Confidence            45789999999999998887 999999999999999999999999999888887776543 2222222234566777777


Q ss_pred             hhc
Q psy13989         82 IRA   84 (85)
Q Consensus        82 ~~~   84 (85)
                      |++
T Consensus       906 i~k  908 (1034)
T KOG0608|consen  906 IQK  908 (1034)
T ss_pred             HHH
Confidence            653

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.46  E-value=7.1e-13  Score=77.43  Aligned_cols=59  Identities=27%  Similarity=0.393  Sum_probs=50.4

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      .+.+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....
T Consensus       229 ~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~  287 (478)
T PTZ00267        229 SSFCGTPYYLAPELWERKR-YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGK  287 (478)
T ss_pred             cccCCCccccCHhHhCCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            3567999999999987766 8889999999999999999999999888877777765543

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.46  E-value=3e-13  Score=75.32  Aligned_cols=74  Identities=23%  Similarity=0.390  Sum_probs=55.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+|++.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+....     ...|...+..+.++++
T Consensus       155 ~~~g~~~y~aPE~~~~~~-~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~li~  228 (318)
T cd05570         155 TFCGTPDYIAPEILSYQP-YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE-----VRYPRWLSKEAKSILK  228 (318)
T ss_pred             ceecCccccCHHHhcCCC-CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-----CCCCCcCCHHHHHHHH
Confidence            356899999999998776 8889999999999999999999999888777666654432     1223334445555543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0585|consensus

Probab=99.45  E-value=2.9e-13  Score=78.07  Aligned_cols=80  Identities=24%  Similarity=0.353  Sum_probs=60.9

Q ss_pred             ccccccccCchhhhcc---ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh-cCCCCCCCcchhchhhhhh
Q psy13989          5 KKVRKAFMAPELLFGA---RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT-LGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~---~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~p~~~~~~~~~   80 (85)
                      .+|||.|+|||.+...   ...+...|+|++|+.+|+++.|+.||.++...+.+.+|... +..|..++..+...+.+..
T Consensus       275 tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~  354 (576)
T KOG0585|consen  275 TVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKR  354 (576)
T ss_pred             cCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHH
Confidence            6899999999998762   23557889999999999999999999999999999998753 3344444444555555555


Q ss_pred             hhhc
Q psy13989         81 LIRA   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      +|.|
T Consensus       355 lL~K  358 (576)
T KOG0585|consen  355 LLEK  358 (576)
T ss_pred             Hhhc
Confidence            5544

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.45  E-value=1.2e-13  Score=77.30  Aligned_cols=79  Identities=22%  Similarity=0.280  Sum_probs=56.2

Q ss_pred             ccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          5 KKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         5 ~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      .+||+.|+|||++..    ...++..+|+|++|+++|++++|..||.+.+....+..+.......+.+......++++.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~  242 (332)
T cd05623         163 AVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKD  242 (332)
T ss_pred             cccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHH
Confidence            579999999999863    2237788999999999999999999999988888877775432222111112234555666


Q ss_pred             hhh
Q psy13989         81 LIR   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus       243 li~  245 (332)
T cd05623         243 LIR  245 (332)
T ss_pred             HHH
Confidence            554

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.45  E-value=4.2e-13  Score=74.90  Aligned_cols=56  Identities=20%  Similarity=0.352  Sum_probs=47.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+..
T Consensus       154 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~  209 (323)
T cd05595         154 TFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  209 (323)
T ss_pred             cccCCcCcCCcccccCCC-CCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            356899999999987766 88899999999999999999999988877766666543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0611|consensus

Probab=99.44  E-value=2.7e-13  Score=77.59  Aligned_cols=61  Identities=16%  Similarity=0.280  Sum_probs=54.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ++|||+|.|.+||++.+.++-+..+|.|++|+++|.++.|..||.|.++.....+|..+-+
T Consensus       210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY  270 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY  270 (668)
T ss_pred             HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc
Confidence            5799999999999999988667889999999999999999999999999998888876543

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.44  E-value=4.7e-14  Score=79.61  Aligned_cols=56  Identities=21%  Similarity=0.457  Sum_probs=49.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +.+||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+.++...+..+..
T Consensus       195 ~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~  250 (360)
T cd05627         195 STVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMN  250 (360)
T ss_pred             ccCCCccccCHHHHcCCC-CCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHc
Confidence            467999999999998776 88899999999999999999999999888777766654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.44  E-value=7e-13  Score=80.07  Aligned_cols=56  Identities=29%  Similarity=0.507  Sum_probs=49.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++..+|+|++||++|++++|..||.+......+..+..
T Consensus       539 ~~vGT~~Y~APE~l~~~~-~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~  594 (669)
T cd05610         539 RILGTPDYLAPELLLGKP-HGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILN  594 (669)
T ss_pred             ceeeCccccCHHHcCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            467999999999998877 88999999999999999999999999888887777654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.44  E-value=1.9e-13  Score=76.44  Aligned_cols=74  Identities=19%  Similarity=0.281  Sum_probs=54.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+....     ..+|...+.++.++++
T Consensus       154 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~~li~  227 (328)
T cd05593         154 TFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED-----IKFPRTLSADAKSLLS  227 (328)
T ss_pred             cccCCcCccChhhhcCCC-CCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC-----ccCCCCCCHHHHHHHH
Confidence            457999999999987766 8889999999999999999999998877766665554321     1233344455555543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.43  E-value=7.2e-14  Score=79.22  Aligned_cols=56  Identities=23%  Similarity=0.451  Sum_probs=48.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +++||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+.++......+..
T Consensus       203 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~  258 (376)
T cd05598         203 SLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVIN  258 (376)
T ss_pred             ccCCCccccCHHHHcCCC-CCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhc
Confidence            468999999999998776 88899999999999999999999998887766655543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=3.1e-13  Score=75.60  Aligned_cols=57  Identities=28%  Similarity=0.547  Sum_probs=49.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+..+....+..
T Consensus       156 ~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  212 (333)
T cd05600         156 NSVVGSPDYMAPEVLRGKG-YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY  212 (333)
T ss_pred             CCcccCccccChhHhcCCC-CCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh
Confidence            4567999999999998776 88999999999999999999999998887777666543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0582|consensus

Probab=99.43  E-value=4.2e-13  Score=76.84  Aligned_cols=59  Identities=25%  Similarity=0.340  Sum_probs=50.1

Q ss_pred             CCccccccccCchhh-hccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELL-FGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~-~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++++||+.|||||++ .....|+.++|+|++|+...|+.+|..||....+..++-+-.++
T Consensus       188 ~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn  247 (516)
T KOG0582|consen  188 NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQN  247 (516)
T ss_pred             ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence            678999999999995 44445999999999999999999999999998888887544443

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.42  E-value=2.8e-13  Score=75.61  Aligned_cols=56  Identities=21%  Similarity=0.429  Sum_probs=48.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+..
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (325)
T cd05602         155 TFCGTPEYLAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN  210 (325)
T ss_pred             cccCCccccCHHHHcCCC-CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            467999999999988766 88899999999999999999999998887777766654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.42  E-value=5.1e-13  Score=73.34  Aligned_cols=78  Identities=17%  Similarity=0.336  Sum_probs=53.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||..|+|||++.+.. ++..+|+|++|++++++++|..||.+.+.......+...... ....++...+.++.++++
T Consensus       160 ~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~  237 (285)
T cd05631         160 GRVGTVGYMAPEVINNEK-YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-DQEEYSEKFSEDAKSICR  237 (285)
T ss_pred             CCCCCCCccCHhhhcCCC-CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-ccccCCccCCHHHHHHHH
Confidence            356899999999998766 888899999999999999999999876543332223222211 122234444555555554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.42  E-value=1e-12  Score=72.02  Aligned_cols=65  Identities=40%  Similarity=0.775  Sum_probs=52.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT   69 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   69 (85)
                      ...|+..|+|||++.+.. ++.++|+|++|++++++++|.++|.+......+.++....+.+....
T Consensus       166 ~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd07863         166 PVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD  230 (288)
T ss_pred             CccccccccCchHhhCCC-CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhh
Confidence            346788999999998776 88899999999999999999999998888777777766554443333

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0983|consensus

Probab=99.42  E-value=5e-13  Score=73.09  Aligned_cols=79  Identities=22%  Similarity=0.310  Sum_probs=59.3

Q ss_pred             CCccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCC-ChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          3 NWKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      +...|++.|||||.+-.  ...|+..+|+||+|+.++++.+|+.||.+. .+.+++.+|...  .||...--..++..+.
T Consensus       249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--ePP~L~~~~gFSp~F~  326 (391)
T KOG0983|consen  249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--EPPLLPGHMGFSPDFQ  326 (391)
T ss_pred             ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc--CCCCCCcccCcCHHHH
Confidence            34579999999999853  334999999999999999999999999985 467888887763  3433332334677777


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      +|+.
T Consensus       327 ~fv~  330 (391)
T KOG0983|consen  327 SFVK  330 (391)
T ss_pred             HHHH
Confidence            7653

>PHA02988 hypothetical protein; Provisional

Probab=99.41  E-value=1.7e-12  Score=71.34  Aligned_cols=58  Identities=10%  Similarity=0.165  Sum_probs=47.6

Q ss_pred             CccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...|+..|+|||++.+. ..++.++|+||+|+++|++++|..||.+.+..+....+...
T Consensus       179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~  237 (283)
T PHA02988        179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINK  237 (283)
T ss_pred             cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            34678899999998652 23889999999999999999999999988877777666543

>KOG0612|consensus

Probab=99.41  E-value=4.2e-13  Score=83.40  Aligned_cols=81  Identities=20%  Similarity=0.359  Sum_probs=62.7

Q ss_pred             CCCccccccccCchhhhc---c-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh---hcCCCCCCCcchhc
Q psy13989          2 QNWKKVRKAFMAPELLFG---A-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ---TLGTPSEDTWPTAG   74 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~---~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~p~~~   74 (85)
                      ++.-+|||-|.+||++..   . +.|+..+|+||+|+.+|+|+.|..||+.++-.+++-+|..   .+..|....+++..
T Consensus       233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeea  312 (1317)
T KOG0612|consen  233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEA  312 (1317)
T ss_pred             eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHH
Confidence            356789999999999863   2 4589999999999999999999999999999999999864   34455455555555


Q ss_pred             hhhhhhhh
Q psy13989         75 VKGLFSLI   82 (85)
Q Consensus        75 ~~~~~~~~   82 (85)
                      ...+..||
T Consensus       313 kdLI~~ll  320 (1317)
T KOG0612|consen  313 KDLIEALL  320 (1317)
T ss_pred             HHHHHHHh
Confidence            44444443

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.41  E-value=3e-13  Score=75.30  Aligned_cols=56  Identities=21%  Similarity=0.379  Sum_probs=47.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+..
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (321)
T cd05603         155 TFCGTPEYLAPEVLRKEP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH  210 (321)
T ss_pred             cccCCcccCCHHHhcCCC-CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc
Confidence            467899999999987766 88889999999999999999999998877666665544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.40  E-value=1.8e-12  Score=71.88  Aligned_cols=66  Identities=42%  Similarity=0.870  Sum_probs=52.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      ..+++.|++||++.+...++...|+|++|++++++++|..||.+.+..+.+..+....+.+....|
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  229 (309)
T cd07872         164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW  229 (309)
T ss_pred             ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            457889999999876544788999999999999999999999988877777777665555544433

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.40  E-value=1.4e-12  Score=71.41  Aligned_cols=55  Identities=47%  Similarity=0.879  Sum_probs=46.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      .+|++.|+|||++.+.. ++...|+|++|++++++++|..||.+.+.......+..
T Consensus       161 ~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~  215 (287)
T cd07848         161 YVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQK  215 (287)
T ss_pred             cccccccCCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            46889999999998776 88899999999999999999999998877665555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.39  E-value=4.2e-13  Score=74.85  Aligned_cols=56  Identities=21%  Similarity=0.408  Sum_probs=48.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+..
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  210 (323)
T cd05575         155 TFCGTPEYLAPEVLRKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN  210 (323)
T ss_pred             cccCChhhcChhhhcCCC-CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            457899999999987766 88899999999999999999999998887777666654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=1.2e-13  Score=77.18  Aligned_cols=58  Identities=19%  Similarity=0.304  Sum_probs=48.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+||+.|+|||++.+...++..+|+|++|+++|++++|..||.+.+....+..+...
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~  212 (330)
T cd05586         155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG  212 (330)
T ss_pred             CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC
Confidence            4679999999999876544778899999999999999999999988877776666543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0666|consensus

Probab=99.39  E-value=1e-12  Score=72.92  Aligned_cols=70  Identities=49%  Similarity=0.894  Sum_probs=62.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC---------hHHHHHHHHhhcCCCCCCCcchh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES---------DLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      ..+.|.+|.|||.+.+..+|....|+|++||++-|+++-.+.|.++.         +.+++.+|...++.|....||..
T Consensus       198 ~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~l  276 (438)
T KOG0666|consen  198 PVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDL  276 (438)
T ss_pred             ceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhh
Confidence            45689999999999999999999999999999999999999997763         36788999999999999999963

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.39  E-value=1.7e-12  Score=72.53  Aligned_cols=62  Identities=37%  Similarity=0.644  Sum_probs=48.3

Q ss_pred             CccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          4 WKKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ..+||+.|+|||++.+. ..++.++|+|++|++++++++|..||.+.+....+..+....+.+
T Consensus       165 ~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~  227 (338)
T cd07859         165 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTP  227 (338)
T ss_pred             CCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCC
Confidence            45789999999998652 237889999999999999999999998887766655554444433

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.39  E-value=9.4e-13  Score=74.80  Aligned_cols=57  Identities=23%  Similarity=0.434  Sum_probs=48.0

Q ss_pred             CccccccccCchhhhccc---cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGAR---MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~---~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++....   .++.++|+|++|+++|++++|..||.+.+.......+..
T Consensus       202 ~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~  261 (371)
T cd05622         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN  261 (371)
T ss_pred             CcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            567999999999986532   267889999999999999999999999888777777654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.38  E-value=4.1e-12  Score=70.27  Aligned_cols=63  Identities=41%  Similarity=0.788  Sum_probs=47.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh-HHHHHHHHhhcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQTLGTPS   66 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~   66 (85)
                      ..+|++.|+|||++.+...++..+|+|++|++++++++|..||.+..+ ...+..+...++.+.
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  225 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPN  225 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCC
Confidence            356788999999987655478889999999999999999999987543 344555544444443

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.37  E-value=4e-13  Score=75.21  Aligned_cols=56  Identities=23%  Similarity=0.437  Sum_probs=46.7

Q ss_pred             ccccccccCchhhhcc----ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      .+||+.|+|||++...    ..++..+|+|++|+++|++++|..||.+.+....+..+..
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~  222 (331)
T cd05624         163 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN  222 (331)
T ss_pred             ccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc
Confidence            5689999999998652    2267789999999999999999999998888777766654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.37  E-value=3.2e-12  Score=72.30  Aligned_cols=62  Identities=34%  Similarity=0.770  Sum_probs=52.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ...||..|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....+.|.
T Consensus       184 ~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  245 (364)
T cd07875         184 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC  245 (364)
T ss_pred             CCcccCCcCCHHHHhCCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            457899999999998776 88899999999999999999999999988888777766555443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG1095|consensus

Probab=99.37  E-value=1.9e-12  Score=80.25  Aligned_cols=71  Identities=18%  Similarity=0.325  Sum_probs=61.2

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ..||+||.+.... |+.+.|+|++|+++||+++ |..||.+.++.+++.....+.+.++|..+|+..-+.+..
T Consensus       868 vkWm~PEsl~d~i-FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~  939 (1025)
T KOG1095|consen  868 VKWMPPESLKDGI-FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQ  939 (1025)
T ss_pred             eecCCHHHHhhcc-cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHH
Confidence            3599999999877 9999999999999999998 999999999999998777777889999988766554444

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.37  E-value=4.8e-12  Score=69.19  Aligned_cols=56  Identities=18%  Similarity=0.357  Sum_probs=46.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+++.|+|||.+.... ++.+.|+|++|++++++++ |..||.+.+..+....+...
T Consensus       186 ~~~~~~y~aPE~~~~~~-~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~  242 (283)
T cd05048         186 SLLPVRWMPPEAILYGK-FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR  242 (283)
T ss_pred             CcccccccCHHHhccCc-CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            34567799999987766 8889999999999999997 99999988887777666544

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=6.1e-13  Score=74.69  Aligned_cols=56  Identities=27%  Similarity=0.531  Sum_probs=48.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++...|+|++|++++++++|..||.+.+......++..
T Consensus       189 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~  244 (350)
T cd05573         189 STVGTPDYIAPEVLRGTP-YGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIIN  244 (350)
T ss_pred             ccccCccccCHHHHcCCC-CCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhc
Confidence            456899999999998876 88899999999999999999999998887777766654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.37  E-value=1.4e-12  Score=74.04  Aligned_cols=57  Identities=23%  Similarity=0.435  Sum_probs=47.7

Q ss_pred             CccccccccCchhhhccc---cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGAR---MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~---~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++....   .++.++|+|++|++++++++|..||.+.+....+..+..
T Consensus       202 ~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~  261 (370)
T cd05596         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMD  261 (370)
T ss_pred             CCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHc
Confidence            467999999999986532   267789999999999999999999999888777777654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=1.9e-12  Score=72.49  Aligned_cols=56  Identities=23%  Similarity=0.437  Sum_probs=46.2

Q ss_pred             ccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      .+||+.|+|||++..    ...++.++|+|++|+++|++++|..||.+.+..+.+..+..
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~  222 (331)
T cd05597         163 AVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN  222 (331)
T ss_pred             eeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence            468999999999863    22367789999999999999999999998887777666654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0665|consensus

Probab=99.36  E-value=8e-13  Score=73.12  Aligned_cols=67  Identities=36%  Similarity=0.749  Sum_probs=61.1

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT   69 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   69 (85)
                      -+..+.|.+|.|||++.+.+ +...+|+||.||.+-+++.|...|.|.+..+++.++...++.|.+..
T Consensus       174 mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F  240 (369)
T KOG0665|consen  174 MTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSF  240 (369)
T ss_pred             cCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHH
Confidence            35678899999999999988 99999999999999999999999999999999999999988887654

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.36  E-value=3.6e-12  Score=72.31  Aligned_cols=61  Identities=41%  Similarity=0.775  Sum_probs=50.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ..+++.|+|||++.+...++.+.|+|++|++++++++|..||.+.++...+..+...++.+
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~  224 (372)
T cd07853         164 EVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP  224 (372)
T ss_pred             CCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCC
Confidence            4578899999998875557888999999999999999999999988887777776554443

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.36  E-value=2e-13  Score=76.18  Aligned_cols=56  Identities=20%  Similarity=0.357  Sum_probs=47.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+..
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~  210 (325)
T cd05594         155 TFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  210 (325)
T ss_pred             cccCCcccCCHHHHccCC-CCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc
Confidence            356899999999997776 88899999999999999999999988877666655543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.35  E-value=5.8e-13  Score=74.33  Aligned_cols=56  Identities=20%  Similarity=0.371  Sum_probs=48.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+..
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~  210 (325)
T cd05604         155 TFCGTPEYLAPEVIRKQP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH  210 (325)
T ss_pred             cccCChhhCCHHHHcCCC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc
Confidence            457899999999998776 88899999999999999999999998887777666654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.35  E-value=4e-12  Score=71.36  Aligned_cols=61  Identities=36%  Similarity=0.719  Sum_probs=49.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT   64 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   64 (85)
                      ..+||+.|+|||++.+...++.++|+|++|++++++++|..||.+.+....+..+....+.
T Consensus       174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  234 (343)
T cd07878         174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT  234 (343)
T ss_pred             CccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence            4578999999999877444888999999999999999999999888777766666554433

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.33  E-value=5e-12  Score=70.73  Aligned_cols=44  Identities=27%  Similarity=0.521  Sum_probs=39.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||..
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         155 TFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             cccCCcccCCHHHHCCCC-CCchheeehhHHHHHHHHhCCCCCCc
Confidence            467999999999997766 88899999999999999999999954

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.33  E-value=1e-11  Score=68.63  Aligned_cols=63  Identities=43%  Similarity=0.902  Sum_probs=50.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      ..+++.|++||.+.+...++.+.|+|++|++++++++|.+||.+.+.......+....+.+.+
T Consensus       186 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~  248 (311)
T cd07866         186 LVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTE  248 (311)
T ss_pred             ceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            456788999999876544778899999999999999999999988887777777665444433

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.33  E-value=6.2e-12  Score=69.85  Aligned_cols=65  Identities=45%  Similarity=0.787  Sum_probs=48.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh---------HHHHHHHHhhcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLGTPSED   68 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~~~~~~   68 (85)
                      ..+||+.|+|||++.+...++..+|+|++|++++++++|.+||.+...         ...+..+....+.+...
T Consensus       174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (317)
T cd07868         174 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK  247 (317)
T ss_pred             CccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChH
Confidence            457889999999988755588899999999999999999999965432         34455555555544443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.33  E-value=2.3e-12  Score=73.25  Aligned_cols=57  Identities=23%  Similarity=0.433  Sum_probs=48.0

Q ss_pred             CccccccccCchhhhccc---cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGAR---MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~---~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +.+||+.|+|||++....   .++..+|+|++|+++|++++|..||.+.+....+..+..
T Consensus       202 ~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~  261 (370)
T cd05621         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD  261 (370)
T ss_pred             cCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            567999999999986532   267789999999999999999999999888777777654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=8.3e-12  Score=67.76  Aligned_cols=76  Identities=21%  Similarity=0.452  Sum_probs=56.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIRA   84 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~   84 (85)
                      ..++..|++||.+.+.. .+...|+|++|++++++++|..||.+.........+   ...+..+..|...++.+.+++++
T Consensus       169 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~i~~  244 (264)
T cd06653         169 VTGTPYWMSPEVISGEG-YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKI---ATQPTKPMLPDGVSDACRDFLKQ  244 (264)
T ss_pred             cCCcccccCHhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHH---HcCCCCCCCCcccCHHHHHHHHH
Confidence            45788899999987765 778899999999999999999999876555444333   23344455677777777777653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.32  E-value=1.2e-11  Score=67.25  Aligned_cols=74  Identities=15%  Similarity=0.221  Sum_probs=54.8

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ++..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+......+.+..+|....+.+...
T Consensus       170 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  244 (266)
T cd05064         170 SPVLWAAPEAIQYHH-FSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDC  244 (266)
T ss_pred             CceeecCHHHHhhCC-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Confidence            456799999987766 8889999999999999765 9999998888777777765544455555555544444433

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=7.2e-12  Score=68.81  Aligned_cols=54  Identities=22%  Similarity=0.448  Sum_probs=44.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI   58 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i   58 (85)
                      ..+|+..|++||++.+.. ++...|+|++|+++|++++|..||.+.+.......+
T Consensus       160 ~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~  213 (285)
T cd05605         160 GRVGTVGYMAPEVVKNER-YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEV  213 (285)
T ss_pred             cccCCCCccCcHHhcCCC-CCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHH
Confidence            357889999999987766 788899999999999999999999887654443333

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.32  E-value=1.7e-11  Score=66.88  Aligned_cols=56  Identities=20%  Similarity=0.342  Sum_probs=45.8

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhc
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      .++..|+|||++.+.. ++.++|+|++|++++++++ |..||.+.+..+....+....
T Consensus       185 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05049         185 MLPIRWMPPESIMYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR  241 (280)
T ss_pred             cccceecChhhhccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            3456799999987766 8888999999999999998 999998887777666665443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.31  E-value=1e-11  Score=67.91  Aligned_cols=64  Identities=53%  Similarity=1.044  Sum_probs=51.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      ...|+..|++||++.+...++.+.|+|++|++++++++|.++|.+......+.++....+.+..
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~  222 (286)
T cd07832         159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNE  222 (286)
T ss_pred             cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCCh
Confidence            4567889999999876554688999999999999999999999888887777777766555444

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG4645|consensus

Probab=99.31  E-value=2.2e-13  Score=85.42  Aligned_cols=77  Identities=16%  Similarity=0.263  Sum_probs=58.5

Q ss_pred             CccccccccCchhhhcc--ccCCchhHHHhHHHHHHHHHHcCCCCCCCC-hHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGES-DLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~--~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      +..||+.|||||++.+.  .......|+||+||++.||.+|+.||...+ ...++.++..+    ..+.+|+..+.+-.|
T Consensus      1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~g----h~Pq~P~~ls~~g~d 1472 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAG----HKPQIPERLSSEGRD 1472 (1509)
T ss_pred             hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhcc----CCCCCchhhhHhHHH
Confidence            56799999999999652  236678899999999999999999997654 45556555443    234467778888888


Q ss_pred             hhhc
Q psy13989         81 LIRA   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ||.+
T Consensus      1473 Fle~ 1476 (1509)
T KOG4645|consen 1473 FLEH 1476 (1509)
T ss_pred             HHHH
Confidence            8754

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.31  E-value=1.4e-12  Score=72.96  Aligned_cols=46  Identities=33%  Similarity=0.437  Sum_probs=39.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..+||+.|+|||++.+...++...|+|++|++++++++|..||.+.
T Consensus       165 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~  210 (332)
T cd05614         165 SFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE  210 (332)
T ss_pred             cccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence            4578999999999876544677899999999999999999999654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0607|consensus

Probab=99.31  E-value=6e-12  Score=70.22  Aligned_cols=79  Identities=23%  Similarity=0.336  Sum_probs=57.8

Q ss_pred             CccccccccCchhhh---c-cccCCchhHHHhHHHHHHHHHHcCCCCCCCC---------------hHHHHHHHHhhcCC
Q psy13989          4 WKKVRKAFMAPELLF---G-ARMYGVGIDMWAVGCIICELLLKAPFLPGES---------------DLDQLTRIFQTLGT   64 (85)
Q Consensus         4 ~~~gt~~~~ape~~~---~-~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~~~~   64 (85)
                      +-||+..|||||++-   + ...|+..+|.||+|+++|.|+.|.+||.|.=               ....++.|..+...
T Consensus       245 tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYe  324 (463)
T KOG0607|consen  245 TPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYE  324 (463)
T ss_pred             CcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCc
Confidence            568999999999863   1 2348999999999999999999999997752               23445566667777


Q ss_pred             CCCCCcchhchhhhhhhhh
Q psy13989         65 PSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus        65 ~~~~~~p~~~~~~~~~~~~   83 (85)
                      +|..+|-.. +.+++|+++
T Consensus       325 FPdkdWahI-S~eakdlis  342 (463)
T KOG0607|consen  325 FPDKDWAHI-SSEAKDLIS  342 (463)
T ss_pred             CChhhhHHh-hHHHHHHHH
Confidence            777777643 344444443

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.30  E-value=1.4e-11  Score=69.60  Aligned_cols=58  Identities=31%  Similarity=0.681  Sum_probs=48.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ...||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....
T Consensus       181 ~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~  238 (359)
T cd07876         181 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL  238 (359)
T ss_pred             CCcccCCCCCchhccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            456889999999998776 8888999999999999999999999887766665554443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.30  E-value=1.2e-11  Score=67.86  Aligned_cols=46  Identities=28%  Similarity=0.460  Sum_probs=40.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+..
T Consensus       156 ~~~g~~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~pf~~~~  201 (280)
T cd05608         156 GYAGTPGFMAPELLQGEE-YDFSVDYFALGVTLYEMIAARGPFRARG  201 (280)
T ss_pred             ccCCCcCccCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            346889999999998776 8888999999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.30  E-value=9.4e-12  Score=70.19  Aligned_cols=60  Identities=33%  Similarity=0.732  Sum_probs=49.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT   64 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   64 (85)
                      ...||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....+.
T Consensus       177 ~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (355)
T cd07874         177 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT  236 (355)
T ss_pred             CccccCCccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            457899999999998776 888999999999999999999999988876666665554443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG1026|consensus

Probab=99.29  E-value=5.9e-12  Score=76.13  Aligned_cols=65  Identities=18%  Similarity=0.311  Sum_probs=55.3

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      .-||+||.+...+ |+..+|+|++|+++||+.+ |..|+.|..+.++++.|.++--.+.++.+|...
T Consensus       669 IRWMppEsIly~k-FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~v  734 (774)
T KOG1026|consen  669 IRWMPPESILYGK-FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEV  734 (774)
T ss_pred             eecCCHHHhhcCc-ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHH
Confidence            4689999999988 9999999999999999987 999999999999999998765556555555443

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.29  E-value=5.6e-13  Score=74.17  Aligned_cols=57  Identities=21%  Similarity=0.331  Sum_probs=48.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+|++.|++||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+...
T Consensus       157 ~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~  213 (318)
T cd05582         157 SFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA  213 (318)
T ss_pred             cccCChhhcCHHHHcCCC-CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC
Confidence            457899999999987766 788899999999999999999999988887777666543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.29  E-value=3.3e-11  Score=65.22  Aligned_cols=71  Identities=15%  Similarity=0.249  Sum_probs=51.8

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      +..|++||.+.... ++...|+|++|++++++++ |..||.+.+.......+.+....+.    |...+.++.++++
T Consensus       161 ~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~  232 (257)
T cd05116         161 PVKWYAPECMNYYK-FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMEC----PQRCPPEMYDLMK  232 (257)
T ss_pred             CccccCHhHhccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCC----CCCCCHHHHHHHH
Confidence            46799999886655 7788999999999999997 9999988887777777665433332    3334444555543

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.29  E-value=3e-11  Score=67.65  Aligned_cols=65  Identities=55%  Similarity=1.062  Sum_probs=52.3

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      .++..|++||++.+...++...|+|++|++++++++|..||.+.+..+.+..+....+.+....|
T Consensus       194 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~  258 (335)
T PTZ00024        194 VVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNW  258 (335)
T ss_pred             ccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhC
Confidence            45778999999876544688899999999999999999999999888887777766555554433

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.29  E-value=1.1e-11  Score=69.38  Aligned_cols=43  Identities=28%  Similarity=0.563  Sum_probs=38.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP   47 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~   47 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~Pf~  197 (329)
T cd05588         155 TFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             cccCCccccCHHHHcCCC-CCCccceechHHHHHHHHHCCCCcc
Confidence            457899999999998766 8888999999999999999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG4236|consensus

Probab=99.28  E-value=1.5e-13  Score=80.62  Aligned_cols=78  Identities=24%  Similarity=0.329  Sum_probs=57.2

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      +.+.+|||.|.|||++.+.+ |+...|+||+|++.|..++|..||..+.  ++-.+|.......|+..|.+. +.+++||
T Consensus       723 RrsVVGTPAYLaPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW~ei-s~~Aidl  798 (888)
T KOG4236|consen  723 RRSVVGTPAYLAPEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPWSEI-SPEAIDL  798 (888)
T ss_pred             hhhhcCCccccCHHHHhhcc-ccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCchhhc-CHHHHHH
Confidence            56789999999999999988 9999999999999999999999995432  222334333334444445554 4667777


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      |+
T Consensus       799 In  800 (888)
T KOG4236|consen  799 IN  800 (888)
T ss_pred             HH
Confidence            65

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.28  E-value=4.3e-11  Score=64.60  Aligned_cols=57  Identities=23%  Similarity=0.369  Sum_probs=46.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...+++.|++||+..+.. ++.+.|+|++|++++++++|..||.+.+.......+...
T Consensus       161 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~  217 (257)
T cd08223         161 TLIGTPYYMSPELFSNKP-YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG  217 (257)
T ss_pred             cccCCcCccChhHhcCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc
Confidence            346788999999987766 778899999999999999999999877766655555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.28  E-value=3.1e-11  Score=66.36  Aligned_cols=61  Identities=46%  Similarity=0.920  Sum_probs=48.7

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      .+++.|+|||++.+...++.+.|+|++|++++++++|..||.+.+....+..+...+..+.
T Consensus       172 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~  232 (295)
T cd07837         172 IVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPT  232 (295)
T ss_pred             ccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            4677899999987654478899999999999999999999998887777666655544443

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.28  E-value=2.1e-11  Score=66.76  Aligned_cols=45  Identities=27%  Similarity=0.506  Sum_probs=39.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..|+..|+|||++.+.. ++...|+|++|+++|++++|..||.+..
T Consensus       154 ~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~  198 (277)
T cd05607         154 RAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHK  198 (277)
T ss_pred             cCCCCCccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCc
Confidence            46788999999987776 8889999999999999999999997653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.28  E-value=2.5e-11  Score=65.39  Aligned_cols=56  Identities=18%  Similarity=0.289  Sum_probs=47.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..|++.|++||+..... ++.+.|+|++|++++++++|..||...+.......+...
T Consensus       161 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  216 (256)
T cd08529         161 IVGTPYYLSPELCEDKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG  216 (256)
T ss_pred             cccCccccCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            46788899999987766 788899999999999999999999888876666666544

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0669|consensus

Probab=99.28  E-value=1.9e-11  Score=66.53  Aligned_cols=77  Identities=34%  Similarity=0.709  Sum_probs=67.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      +..+.|.+|..||.+.+...|+.+.|+|..||++-++.++.+.+.|.....+++.|.+..+...+..||+...-.++
T Consensus       186 tnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~  262 (376)
T KOG0669|consen  186 TNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLY  262 (376)
T ss_pred             ccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHH
Confidence            44567999999999999877999999999999999999999999999999999999988888888889875544443

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.28  E-value=3.8e-11  Score=66.58  Aligned_cols=60  Identities=55%  Similarity=0.993  Sum_probs=49.6

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ++..|++||++.+...++...|+|++|++++++++|..||.+.+....+..+....+.+.
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~  229 (309)
T cd07845         170 VTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPN  229 (309)
T ss_pred             ccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            467799999987644478889999999999999999999999988888877776555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.27  E-value=3.8e-11  Score=65.67  Aligned_cols=59  Identities=41%  Similarity=0.816  Sum_probs=46.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ..+++.|+|||++.+...++...|+|++|++++++++|..||.+.........+.+..+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~  219 (285)
T cd07861         161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILG  219 (285)
T ss_pred             CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhC
Confidence            35678899999987654477889999999999999999999988776655555544433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=2.6e-11  Score=65.63  Aligned_cols=76  Identities=24%  Similarity=0.468  Sum_probs=54.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ...++..|+|||++.+.. ++.+.|+|++|+++|++++|..||.+.+.......+...   ......+...+..+.++++
T Consensus       166 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~  241 (263)
T cd06625         166 SVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ---PTNPQLPSHVSPDARNFLR  241 (263)
T ss_pred             CCCcCccccCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc---CCCCCCCccCCHHHHHHHH
Confidence            345778899999998776 888999999999999999999999877665555444332   1223344455555555554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.27  E-value=4e-11  Score=66.26  Aligned_cols=76  Identities=22%  Similarity=0.302  Sum_probs=53.3

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..++..|++||.+.+.. ++...|+|++|++++++++|..||.+.+.......+...  ..+....+...+..+.++++
T Consensus       175 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~  250 (296)
T cd06655         175 MVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--GTPELQNPEKLSPIFRDFLN  250 (296)
T ss_pred             cCCCccccCcchhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--CCcccCCcccCCHHHHHHHH
Confidence            46788899999987766 788899999999999999999999888776655444332  12222223344445555543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.27  E-value=5e-11  Score=65.52  Aligned_cols=54  Identities=19%  Similarity=0.340  Sum_probs=44.7

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+..+
T Consensus       184 ~~~~y~aPE~~~~~~-~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~  238 (288)
T cd05093         184 LPIRWMPPESIMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG  238 (288)
T ss_pred             ccccccCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            456799999987765 8889999999999999998 89999888777766666554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.26  E-value=3.5e-11  Score=66.47  Aligned_cols=66  Identities=42%  Similarity=0.865  Sum_probs=51.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      ..+++.|++||++.+...++...|+|++|++++++++|..||.+.+..+....+......+....|
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~  229 (301)
T cd07873         164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETW  229 (301)
T ss_pred             cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhc
Confidence            356788999999876544778899999999999999999999988877776666665554444433

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.26  E-value=1.6e-11  Score=66.32  Aligned_cols=57  Identities=21%  Similarity=0.338  Sum_probs=47.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...|+..|+|||++.+.. ++...|+|++|++++++++|..||.+.+.......+...
T Consensus       159 ~~~~~~~~~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~  215 (255)
T cd08219         159 TYVGTPYYVPPEIWENMP-YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG  215 (255)
T ss_pred             cccCCccccCHHHHccCC-cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC
Confidence            356788899999987766 788899999999999999999999888776666555544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0662|consensus

Probab=99.26  E-value=1.3e-11  Score=64.28  Aligned_cols=71  Identities=46%  Similarity=0.923  Sum_probs=63.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      ..+.|.+|.+|.++.+.+-|+...|+||.||++.|+.. |.+.|+|.+-.+++.+|...++.|.+..||...
T Consensus       160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t  231 (292)
T KOG0662|consen  160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMT  231 (292)
T ss_pred             ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccc
Confidence            34578899999999987779999999999999999886 889999999999999999999999999998643

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.26  E-value=4.5e-11  Score=74.61  Aligned_cols=54  Identities=31%  Similarity=0.479  Sum_probs=43.3

Q ss_pred             CccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR   57 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~   57 (85)
                      ..+||+.|+|||++... ..++.++|+|++|+++|++++|..||...+....+..
T Consensus       200 s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~  254 (1021)
T PTZ00266        200 SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLIS  254 (1021)
T ss_pred             ccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHH
Confidence            45789999999998643 3377889999999999999999999987665544433

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.26  E-value=4.6e-11  Score=65.42  Aligned_cols=72  Identities=19%  Similarity=0.325  Sum_probs=52.0

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      .+++.|+|||.+.... ++...|+|++|++++++++ |..||.+....+....+......+.+...|......+
T Consensus       187 ~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li  259 (283)
T cd05091         187 LLPIRWMSPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLM  259 (283)
T ss_pred             cCCccccCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence            3456899999987766 7888999999999999997 8889988887777766655433333334444333333

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=5.4e-11  Score=66.11  Aligned_cols=56  Identities=21%  Similarity=0.481  Sum_probs=47.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      .+.|+..|++||++.+.. ++...|+|++|+++|++++|..||.+.+....+..+..
T Consensus       191 ~~~g~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~  246 (316)
T cd05574         191 SFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILK  246 (316)
T ss_pred             CCcCccCCcCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhc
Confidence            457888999999998776 78889999999999999999999988887766655543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0596|consensus

Probab=99.26  E-value=1.1e-11  Score=72.92  Aligned_cols=46  Identities=20%  Similarity=0.428  Sum_probs=38.0

Q ss_pred             CCCccccccccCchhhhccc----------cCCchhHHHhHHHHHHHHHHcCCCCC
Q psy13989          2 QNWKKVRKAFMAPELLFGAR----------MYGVGIDMWAVGCIICELLLKAPFLP   47 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~----------~~~~~~~~ws~g~~~~~~~~~~~~~~   47 (85)
                      +.+-+||+.||+||.+....          ..+.+.|+||+||++|+|+.|++||.
T Consensus       518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~  573 (677)
T KOG0596|consen  518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFG  573 (677)
T ss_pred             eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchH
Confidence            34678999999999885321          15678999999999999999999994

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.26  E-value=3.4e-11  Score=65.39  Aligned_cols=75  Identities=23%  Similarity=0.468  Sum_probs=53.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..|+..|++||++.+.. ++...|+|++|++++++++|..||.+.........+.   ..+..+..|...+..+.++++
T Consensus       169 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~  243 (265)
T cd06652         169 VTGTPYWMSPEVISGEG-YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA---TQPTNPVLPPHVSDHCRDFLK  243 (265)
T ss_pred             CCCCccccChhhhcCCC-CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh---cCCCCCCCchhhCHHHHHHHH
Confidence            45778899999987765 7888999999999999999999998765554443332   223334445555556666654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=5.5e-11  Score=64.29  Aligned_cols=78  Identities=21%  Similarity=0.149  Sum_probs=52.5

Q ss_pred             ccccccccCchhhhcc---ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGA---RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~---~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ..++..|++||.+...   . ++..+|+|++|++++++++|..||.+.+.......+......++....+...+.++.++
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~-~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (262)
T cd06613         161 FIGTPYWMAPEVAAVERKGG-YDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDF  239 (262)
T ss_pred             ccCCccccCchhhcccccCC-cCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHH
Confidence            4677889999998665   4 77889999999999999999999988776665544433211222222223334455555


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      ++
T Consensus       240 i~  241 (262)
T cd06613         240 IK  241 (262)
T ss_pred             HH
Confidence            54

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.25  E-value=4.3e-11  Score=67.11  Aligned_cols=60  Identities=38%  Similarity=0.789  Sum_probs=47.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT   64 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   64 (85)
                      .+|+..|+|||++.+...++...|+|++|++++++++|..||.+.+.......+...++.
T Consensus       169 ~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~  228 (336)
T cd07849         169 YVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT  228 (336)
T ss_pred             cCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence            467889999998765444788899999999999999999999887766655555444443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.25  E-value=6.7e-11  Score=66.31  Aligned_cols=50  Identities=28%  Similarity=0.489  Sum_probs=42.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLD   53 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~   53 (85)
                      +...|++.|+|||++.+.. ++.+.|+|++|++++++++|..||...+..+
T Consensus       160 ~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~  209 (331)
T cd06649         160 NSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVELAIGRYPIPPPDAKE  209 (331)
T ss_pred             ccCCCCcCcCCHhHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            3457899999999998776 8889999999999999999999997665443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.25  E-value=3.9e-11  Score=65.93  Aligned_cols=54  Identities=26%  Similarity=0.525  Sum_probs=44.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI   58 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i   58 (85)
                      ...|+..|++||++.+.. ++.+.|+|++|++++++++|..||.+.........+
T Consensus       160 ~~~g~~~~~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~  213 (285)
T cd05632         160 GRVGTVGYMAPEVLNNQR-YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV  213 (285)
T ss_pred             CCCCCcCccChHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            346889999999987766 888899999999999999999999887665444444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.25  E-value=9.8e-12  Score=69.64  Aligned_cols=43  Identities=28%  Similarity=0.563  Sum_probs=38.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP   47 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~   47 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.
T Consensus       155 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         155 TFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             cccCCccccCHHHHcCCC-CCCccceecccHHHHHHhhCCCCCc
Confidence            457899999999998776 8888999999999999999999994

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.24  E-value=6.9e-11  Score=64.15  Aligned_cols=55  Identities=25%  Similarity=0.513  Sum_probs=44.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      +.|+..|++||.+.+.. ++...|+|++|++++++++|..||.+.+.......+..
T Consensus       172 ~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  226 (267)
T cd06628         172 LQGSVFWMAPEVVKQTS-YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE  226 (267)
T ss_pred             cCCCcCccChhHhccCC-CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc
Confidence            45778899999987766 77889999999999999999999987766555544433

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.24  E-value=7.5e-11  Score=64.92  Aligned_cols=56  Identities=20%  Similarity=0.321  Sum_probs=45.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..++..|++||++.+.. ++.+.|+|++|++++++++ |..||...+.......+...
T Consensus       185 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  241 (291)
T cd05094         185 TMLPIRWMPPESIMYRK-FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG  241 (291)
T ss_pred             CCcceeecChHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC
Confidence            34567899999987766 7888999999999999998 99999887776666555443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0603|consensus

Probab=99.24  E-value=2.3e-11  Score=71.96  Aligned_cols=71  Identities=21%  Similarity=0.384  Sum_probs=54.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChH-HHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL-DQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      -|-|..|.|||++.... |+..+|+||+|+++|+|++|..||...... +++.+|.    .+   .+.+..+..++++++
T Consensus       473 p~~t~~y~APEvl~~~~-yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~----~~---~~s~~vS~~AKdLl~  544 (612)
T KOG0603|consen  473 PALTLQYVAPEVLAIQE-YTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ----MP---KFSECVSDEAKDLLQ  544 (612)
T ss_pred             cchhhcccChhhhccCC-CCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc----CC---ccccccCHHHHHHHH
Confidence            46678899999998665 999999999999999999999999876654 4444442    22   223777788888775

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.24  E-value=2.7e-11  Score=66.89  Aligned_cols=45  Identities=11%  Similarity=-0.057  Sum_probs=40.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..||+.|++||+..+.. ++.+.|+||+|++++++++|..||.+..
T Consensus       193 ~~gt~~y~ape~~~~~~-~~~~~DiwSlG~~l~el~~g~~P~~~~~  237 (294)
T PHA02882        193 HRGTLYYAGLDAHNGAC-VTRRGDLESLGYCMLKWAGIKLPWKGFG  237 (294)
T ss_pred             cCCCccccCHHHhCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence            56999999999987776 8899999999999999999999998774

>KOG0606|consensus

Probab=99.24  E-value=1.6e-11  Score=76.24  Aligned_cols=64  Identities=22%  Similarity=0.386  Sum_probs=56.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED   68 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   68 (85)
                      ..|||+.|.|||++...+ |+..+|+|++|+++|+.+-|..||.|+.+.+.+..++.....-++.
T Consensus       217 qvcgTPeyiaPeVilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~  280 (1205)
T KOG0606|consen  217 QVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE  280 (1205)
T ss_pred             cccCCccccChhhhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence            469999999999999888 9999999999999999999999999999999988888765544443

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.24  E-value=8e-11  Score=64.50  Aligned_cols=55  Identities=16%  Similarity=0.369  Sum_probs=44.9

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      .++..|++||++.+.. ++...|+|++|++++++++ |..||.+.........+...
T Consensus       187 ~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  242 (283)
T cd05090         187 LLPIRWMPPEAIMYGK-FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR  242 (283)
T ss_pred             CccceecChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            3456799999987766 7889999999999999998 88999888776666666543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.23  E-value=7.6e-11  Score=63.85  Aligned_cols=66  Identities=20%  Similarity=0.395  Sum_probs=49.0

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      ++..|++||.+.... ++.+.|+|++|++++++++ |..||.+.........+......+.....|..
T Consensus       166 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (261)
T cd05072         166 FPIKWTAPEAINFGS-FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDE  232 (261)
T ss_pred             cceecCCHHHhccCC-CChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHH
Confidence            445799999987665 7888999999999999998 99999888777777666554433333333333

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG1006|consensus

Probab=99.23  E-value=3.5e-12  Score=69.54  Aligned_cols=78  Identities=18%  Similarity=0.266  Sum_probs=55.0

Q ss_pred             CCccccccccCchhhhccc-cCCchhHHHhHHHHHHHHHHcCCCCCCCCh-HHHHHHHHhhcCCCCCCCcchh---chhh
Q psy13989          3 NWKKVRKAFMAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQTLGTPSEDTWPTA---GVKG   77 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~-~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~p~~---~~~~   77 (85)
                      +.-.|+..|||||.+.... .|+.++|+||+|+.++|+.+|..|+.+.+. .+++..+..  +.||....+..   .+..
T Consensus       225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~l~~~~~~~~~s~~  302 (361)
T KOG1006|consen  225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GDPPILLFDKECVHYSFS  302 (361)
T ss_pred             hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CCCCeecCcccccccCHH
Confidence            3456899999999986533 389999999999999999999999988764 344444433  35555555543   4444


Q ss_pred             hhhhh
Q psy13989         78 LFSLI   82 (85)
Q Consensus        78 ~~~~~   82 (85)
                      +..|+
T Consensus       303 ~~~fi  307 (361)
T KOG1006|consen  303 MVRFI  307 (361)
T ss_pred             HHHHH
Confidence            44444

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.23  E-value=8.7e-11  Score=64.67  Aligned_cols=62  Identities=44%  Similarity=0.967  Sum_probs=48.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ..+++.|++||++.+...++.+.|+|++|++++++++|..||.+.........+....+.+.
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~  224 (294)
T PLN00009        163 EVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPN  224 (294)
T ss_pred             CceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            34677899999986644477889999999999999999999988877777666655444443

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=9e-11  Score=64.00  Aligned_cols=56  Identities=25%  Similarity=0.290  Sum_probs=46.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ...++..|++||++.+.. ++.+.|+|++|++++++++|..||.+.++......+..
T Consensus       157 ~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~  212 (274)
T cd06609         157 TFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK  212 (274)
T ss_pred             cccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhh
Confidence            356778899999988776 88899999999999999999999987776665555444

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.23  E-value=9.9e-11  Score=63.93  Aligned_cols=59  Identities=39%  Similarity=0.798  Sum_probs=47.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ..++..|++||++.....++...|+|++|++++++++|..||.+.+..+....+...++
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~  216 (282)
T cd07831         158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLG  216 (282)
T ss_pred             CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcC
Confidence            45788899999876544467889999999999999999999998887776666655443

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.23  E-value=6.3e-11  Score=65.46  Aligned_cols=53  Identities=26%  Similarity=0.425  Sum_probs=43.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR   57 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~   57 (85)
                      ...|++.|++||.+.+.. ++.+.|+|++|++++++++|..||.+..+......
T Consensus       175 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~  227 (296)
T cd06654         175 TMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL  227 (296)
T ss_pred             cccCCccccCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHH
Confidence            346888999999987765 77889999999999999999999988776554433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.23  E-value=8.2e-11  Score=63.85  Aligned_cols=77  Identities=22%  Similarity=0.361  Sum_probs=52.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ...|+..|++||++.+.. ++...|+|++|++++++++|..||...+.......+.....  ..+..+...+.++.++++
T Consensus       167 ~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~  243 (265)
T cd06631         167 SMHGTPYWMAPEVINESG-YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG--LMPRLPDSFSAAAIDFVT  243 (265)
T ss_pred             ccCCCccccChhhhcCCC-CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC--CCCCCCCCCCHHHHHHHH
Confidence            345788899999987766 78889999999999999999999987665544433332211  112233445555555554

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.23  E-value=1e-10  Score=64.10  Aligned_cols=54  Identities=19%  Similarity=0.356  Sum_probs=44.4

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +++.|++||++.+.. ++.++|+|++|++++++++ |..||......+....+...
T Consensus       186 ~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  240 (280)
T cd05092         186 LPIRWMPPESILYRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG  240 (280)
T ss_pred             ccccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC
Confidence            356799999987766 8888999999999999998 89999887777766666544

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.22  E-value=1.1e-10  Score=64.42  Aligned_cols=54  Identities=20%  Similarity=0.269  Sum_probs=44.5

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcC
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ..|++||+..+.. ++.++|+|++|++++++++ |..||.+.........+.....
T Consensus       182 ~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~  236 (297)
T cd05089         182 VRWMAIESLNYSV-YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  236 (297)
T ss_pred             ccccCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence            4599999987766 8889999999999999997 9999988887777766655443

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.22  E-value=4.9e-11  Score=65.31  Aligned_cols=78  Identities=19%  Similarity=0.280  Sum_probs=52.3

Q ss_pred             CccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          4 WKKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ...++..|++||++..    ...++...|+|++|++++++++|..||.+.++......+....  ++....+...+..+.
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  239 (282)
T cd06643         162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--PPTLAQPSRWSSEFK  239 (282)
T ss_pred             cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC--CCCCCCccccCHHHH
Confidence            3567889999999742    2226678999999999999999999998877766655554332  222222333444555


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus       240 ~li~  243 (282)
T cd06643         240 DFLK  243 (282)
T ss_pred             HHHH
Confidence            5554

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.22  E-value=6.7e-11  Score=65.03  Aligned_cols=55  Identities=27%  Similarity=0.497  Sum_probs=46.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..|+..|++||+..+.. ++.+.|+|++|++++++++|..||.+.++......+..
T Consensus       175 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~  229 (285)
T cd06648         175 LVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRD  229 (285)
T ss_pred             ccCCccccCHHHhcCCC-CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHh
Confidence            45788999999987765 78889999999999999999999988877666655543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.22  E-value=7.8e-11  Score=65.16  Aligned_cols=55  Identities=24%  Similarity=0.468  Sum_probs=45.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      ..+|+..|++||++.+.. ++.+.|+|++|++++++++|..||........+..+.
T Consensus       176 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~  230 (297)
T cd06659         176 SLVGTPYWMAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR  230 (297)
T ss_pred             ceecCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            356888999999987766 7888999999999999999999998877766665543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.22  E-value=8.1e-11  Score=64.39  Aligned_cols=57  Identities=46%  Similarity=0.983  Sum_probs=45.4

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      .++..|++||++.+...++...|+|++|++++++++|..||.+.+....+..+....
T Consensus       160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  216 (283)
T cd07835         160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTL  216 (283)
T ss_pred             ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            457789999988665447788999999999999999999998887766655554443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.22  E-value=9.5e-11  Score=64.15  Aligned_cols=58  Identities=43%  Similarity=0.803  Sum_probs=43.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCC-CCCCChHHHHHHHHhhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPF-LPGESDLDQLTRIFQTL   62 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~   62 (85)
                      ..++..|++||++.+...++.+.|+|++|++++++++|..| |.+.+....+..+....
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~  217 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL  217 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHh
Confidence            35678899999987654478889999999999999997766 45555555555554443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.22  E-value=6.1e-11  Score=66.50  Aligned_cols=46  Identities=28%  Similarity=0.542  Sum_probs=38.7

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHH
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLD   53 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~   53 (85)
                      ++..|+|||++.+.. ++.++|+|++|+++|++++ |..||.+.....
T Consensus       238 ~~~~y~aPE~~~~~~-~~~~sDiwslG~il~el~~~g~~pf~~~~~~~  284 (338)
T cd05102         238 LPLKWMAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQINE  284 (338)
T ss_pred             CCccccCcHHhhcCC-CCcccCHHHHHHHHHHHHhCCCCCCCCCCccH
Confidence            456799999997776 8889999999999999997 999998765433

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.21  E-value=6.6e-11  Score=64.86  Aligned_cols=47  Identities=23%  Similarity=0.405  Sum_probs=39.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..+|+..|++||++.+...++...|+|++|++++++++|..||.+..
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~  200 (278)
T cd05606         154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  200 (278)
T ss_pred             CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCC
Confidence            35688999999998754337788999999999999999999997763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.21  E-value=1.2e-10  Score=63.52  Aligned_cols=64  Identities=48%  Similarity=0.972  Sum_probs=50.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED   68 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   68 (85)
                      ..++..|++||.+.+...++.+.|+|++|++++++++|+.+|.+.+..+.+..+...++.+.+.
T Consensus       158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (283)
T cd05118         158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPE  221 (283)
T ss_pred             ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchH
Confidence            4467789999998776347889999999999999999999998888777776666655554443

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.21  E-value=8.2e-11  Score=65.32  Aligned_cols=46  Identities=46%  Similarity=0.765  Sum_probs=39.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ...||+.|+|||++.+...++.+.|+|++|++++++++|.+||...
T Consensus       174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         174 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            3467889999999876544788899999999999999999999654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.21  E-value=8.4e-11  Score=65.87  Aligned_cols=61  Identities=41%  Similarity=0.801  Sum_probs=49.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ..|+..|++||+..+...++..+|+|++|++++++++|.+||.+.+....+..+....+.+
T Consensus       169 ~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  229 (332)
T cd07857         169 YVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTP  229 (332)
T ss_pred             cccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCC
Confidence            4688899999998764347889999999999999999999998888777777666655544

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.21  E-value=1.2e-10  Score=63.68  Aligned_cols=52  Identities=17%  Similarity=0.420  Sum_probs=42.7

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      +..|++||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+..
T Consensus       184 ~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~  236 (277)
T cd05036         184 PIKWMPPEAFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG  236 (277)
T ss_pred             cHhhCCHHHHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            34699999987766 8899999999999999986 9999988877666655544

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.20  E-value=1.2e-10  Score=63.71  Aligned_cols=54  Identities=20%  Similarity=0.361  Sum_probs=44.1

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|+|||++.+.. ++...|+|++|++++++++ |..||.+.+.......+...
T Consensus       183 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~  237 (277)
T cd05062         183 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG  237 (277)
T ss_pred             cCHhhcChhHhhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            456799999987766 8888999999999999998 78899888777666655443

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.20  E-value=1.1e-10  Score=63.44  Aligned_cols=74  Identities=19%  Similarity=0.310  Sum_probs=52.1

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ++..|++||+..... ++...|+|++|++++++++ |..||.+.........+......+.....+....+.+..+
T Consensus       165 ~~~~y~~PE~~~~~~-~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  239 (262)
T cd05071         165 FPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC  239 (262)
T ss_pred             ccceecCHhHhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHH
Confidence            445699999887666 8889999999999999998 8889988877777666654433333334444444444333

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.20  E-value=9.7e-11  Score=63.91  Aligned_cols=46  Identities=30%  Similarity=0.521  Sum_probs=39.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ..++..|+|||++.+.. ++.+.|+|++|++++++++|..||.+...
T Consensus       166 ~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~  211 (267)
T PHA03390        166 YDGTLDYFSPEKIKGHN-YDVSFDWWAVGVLTYELLTGKHPFKEDED  211 (267)
T ss_pred             CCCCCcccChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCc
Confidence            45788999999987766 78889999999999999999999976543

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.20  E-value=9.2e-11  Score=64.54  Aligned_cols=56  Identities=25%  Similarity=0.529  Sum_probs=46.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+|++.|++||.+.+.. .+...|+|++|++++++++|..||.+.+.......+..
T Consensus       157 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  212 (290)
T cd05580         157 TLCGTPEYLAPEIILSKG-YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE  212 (290)
T ss_pred             CCCCCccccChhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            346888999999987665 77889999999999999999999988776666655543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.20  E-value=1.4e-10  Score=64.04  Aligned_cols=55  Identities=27%  Similarity=0.501  Sum_probs=45.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..|+..|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+....+..+..
T Consensus       178 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~  232 (292)
T cd06658         178 LVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD  232 (292)
T ss_pred             eecCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            45788999999987766 78889999999999999999999988877666555443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.19  E-value=1.8e-10  Score=62.37  Aligned_cols=54  Identities=22%  Similarity=0.437  Sum_probs=44.1

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|+|||...... ++...|+|++|++++++++ |..||.+.+..+....+...
T Consensus       165 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~  219 (260)
T cd05070         165 FPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG  219 (260)
T ss_pred             CCccccChHHHhcCC-CcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            345699999987665 7788999999999999998 88999888877777666543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.19  E-value=1.3e-10  Score=63.60  Aligned_cols=60  Identities=45%  Similarity=0.990  Sum_probs=47.0

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      .++..|++||++.+...++...|+|++|++++++++|..||.+.+......++....+.+
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~  220 (284)
T cd07860         161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP  220 (284)
T ss_pred             cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            457789999988665436778999999999999999999998887766666655544443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG1290|consensus

Probab=99.19  E-value=1.9e-11  Score=70.96  Aligned_cols=64  Identities=27%  Similarity=0.517  Sum_probs=51.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC------hHHHHHHHHhhcCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------DLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~   67 (85)
                      +.-+.|..|.||||+.+.+ |+..+|+||++|+.+|+++|...|...+      +.+.+++|+..++..|.
T Consensus       409 T~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr  478 (590)
T KOG1290|consen  409 TEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPR  478 (590)
T ss_pred             chhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccH
Confidence            3456899999999999998 9999999999999999999987774332      45677778777766444

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.19  E-value=1.1e-10  Score=63.47  Aligned_cols=75  Identities=21%  Similarity=0.456  Sum_probs=53.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..++..|+|||.+.+.. ++...|+|++|++++++++|..||...........+..   .+..+.+|....+.+.++++
T Consensus       169 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~  243 (266)
T cd06651         169 VTGTPYWMSPEVISGEG-YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTNPQLPSHISEHARDFLG  243 (266)
T ss_pred             CCccccccCHHHhCCCC-CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc---CCCCCCCchhcCHHHHHHHH
Confidence            34677899999987765 78889999999999999999999987665444433322   23334455555566666553

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.19  E-value=1.2e-10  Score=63.34  Aligned_cols=55  Identities=25%  Similarity=0.300  Sum_probs=42.8

Q ss_pred             CccccccccCchhhhcc----ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI   58 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i   58 (85)
                      ...|+..|++||++...    ..++...|+|++|++++++++|..||...........+
T Consensus       170 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~  228 (272)
T cd06637         170 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI  228 (272)
T ss_pred             cccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence            35688899999998631    23777899999999999999999999776655554443

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.19  E-value=1.8e-10  Score=63.88  Aligned_cols=55  Identities=24%  Similarity=0.506  Sum_probs=46.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..++..|++||.+.... ++.+.|+|++|++++++++|..||.+.........+..
T Consensus       176 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~  230 (305)
T cd05609         176 VCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS  230 (305)
T ss_pred             CccCccccCchhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            35677899999987766 78889999999999999999999998887776666544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.19  E-value=9.6e-11  Score=63.64  Aligned_cols=55  Identities=25%  Similarity=0.215  Sum_probs=41.8

Q ss_pred             CccccccccCchhhh--ccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLF--GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI   58 (85)
Q Consensus         4 ~~~gt~~~~ape~~~--~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i   58 (85)
                      ...|+..|+|||++.  ....++.++|+|++|++++++++|..||....+......+
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~  221 (267)
T cd06645         165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM  221 (267)
T ss_pred             cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh
Confidence            346889999999974  2223778899999999999999999998766654444333

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.19  E-value=2.1e-10  Score=62.23  Aligned_cols=54  Identities=22%  Similarity=0.426  Sum_probs=44.3

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|++||...+.. .+...|+|++|++++++++ |..||.+....+....+...
T Consensus       165 ~~~~y~~Pe~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~  219 (260)
T cd05069         165 FPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG  219 (260)
T ss_pred             cchhhCCHHHhccCC-cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            445699999887665 7888999999999999998 89999888877776666544

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.19  E-value=7.7e-11  Score=66.07  Aligned_cols=62  Identities=40%  Similarity=0.760  Sum_probs=49.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ..|+..|++||++.+...++.+.|+|++|++++++++|..||.+.+....+..+....+.++
T Consensus       171 ~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~  232 (334)
T cd07855         171 YVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS  232 (334)
T ss_pred             ccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence            46788999999986644478889999999999999999999998887766666655544443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.19  E-value=1.7e-10  Score=62.62  Aligned_cols=54  Identities=20%  Similarity=0.323  Sum_probs=43.7

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhc
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      +..|++||.+.+.. ++...|+|++|++++++++ |..||.+.+..+....+....
T Consensus       168 ~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  222 (263)
T cd05052         168 PIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY  222 (263)
T ss_pred             ccccCCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC
Confidence            45699999987766 7788999999999999998 899998877766666665443

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.18  E-value=2e-10  Score=62.15  Aligned_cols=72  Identities=18%  Similarity=0.335  Sum_probs=53.2

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      +..|++||.+.+.. .+.+.|+|++|++++++++ |..||.+......+..+......+.+...|....+.+..
T Consensus       167 ~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  239 (261)
T cd05034         167 PIKWTAPEAANYGR-FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQ  239 (261)
T ss_pred             CccccCHHHhccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            45699999987665 7888999999999999998 999998888777777776654444444444444333333

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=1.1e-10  Score=63.81  Aligned_cols=77  Identities=19%  Similarity=0.310  Sum_probs=52.2

Q ss_pred             ccccccccCchhhhcc----ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          5 KKVRKAFMAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ..+++.|++||++...    ..++.++|+|++|+++|++++|..||.+.+....+..+...  .++....+...+.++.+
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  240 (280)
T cd06611         163 FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EPPTLDQPSKWSSSFND  240 (280)
T ss_pred             eecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC--CCCCcCCcccCCHHHHH
Confidence            4678889999997521    22667899999999999999999999887776665555432  22222233344455555


Q ss_pred             hhh
Q psy13989         81 LIR   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus       241 li~  243 (280)
T cd06611         241 FLK  243 (280)
T ss_pred             HHH
Confidence            554

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.18  E-value=1.9e-10  Score=62.29  Aligned_cols=56  Identities=16%  Similarity=0.356  Sum_probs=45.1

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcC
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ++..|++||++.... ++.+.|+|++|++++++++ |..||.+.+..+....+.....
T Consensus       165 ~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~  221 (260)
T cd05067         165 FPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR  221 (260)
T ss_pred             ccccccCHHHhccCC-cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC
Confidence            445799999987665 7788999999999999998 9999988887776666654433

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0670|consensus

Probab=99.18  E-value=1.3e-12  Score=76.52  Aligned_cols=64  Identities=28%  Similarity=0.542  Sum_probs=54.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED   68 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   68 (85)
                      .+..+.+|.|||++++.. |+...|+||+||.+|++.+|+..|+|....+++......-+..|..
T Consensus       594 PYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~K  657 (752)
T KOG0670|consen  594 PYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNK  657 (752)
T ss_pred             HHHHHHhccCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHH
Confidence            345677899999999998 9999999999999999999999999999999988777665555443

>KOG0664|consensus

Probab=99.18  E-value=7.5e-12  Score=68.79  Aligned_cols=65  Identities=42%  Similarity=0.781  Sum_probs=58.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED   68 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   68 (85)
                      ..+.|.+|.|||++.+..+|+..+|+||+||++-|++..+..|...++..+++.|...++.|..+
T Consensus       216 qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~E  280 (449)
T KOG0664|consen  216 HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQE  280 (449)
T ss_pred             HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHH
Confidence            34568899999999998889999999999999999999999999999999999998888877544

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.18  E-value=2.1e-10  Score=62.16  Aligned_cols=73  Identities=19%  Similarity=0.347  Sum_probs=52.7

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ..|++||++.+.. ++.+.|+|++|++++++++ |..||.+.........+......+.+...+....+.+...+
T Consensus       168 ~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  241 (261)
T cd05068         168 IKWTAPEAALYNR-FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCW  241 (261)
T ss_pred             eeccCccccccCC-CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHh
Confidence            3699999887765 7888999999999999998 99999988877777776555443434444444444443333

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.18  E-value=7.1e-12  Score=70.06  Aligned_cols=56  Identities=23%  Similarity=0.434  Sum_probs=46.0

Q ss_pred             ccccccccCchhhhc-----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFG-----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~-----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      .+||+.|+|||++..     ...++.++|+|++|++++++++|..||.+.+....+..+..
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~  223 (330)
T cd05601         163 PVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMN  223 (330)
T ss_pred             ccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHc
Confidence            468999999999863     22367889999999999999999999988887777766654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.17  E-value=2.1e-10  Score=61.91  Aligned_cols=57  Identities=30%  Similarity=0.549  Sum_probs=47.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...+++.|.+||++.+.. ++...|+|++|++++++++|..||.+.+..+....+...
T Consensus       160 ~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  216 (256)
T cd08221         160 TVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG  216 (256)
T ss_pred             ccCCCccccCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence            356888999999987765 777899999999999999999999887777776666544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.17  E-value=1.9e-10  Score=62.90  Aligned_cols=58  Identities=40%  Similarity=0.896  Sum_probs=46.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ..++..|++||++.+...++...|+|++|++++++++|..||.+.+..+....+....
T Consensus       160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~  217 (284)
T cd07836         160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM  217 (284)
T ss_pred             ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence            4567889999998765447788999999999999999999998887766666655443

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG1024|consensus

Probab=99.17  E-value=8.4e-11  Score=67.24  Aligned_cols=66  Identities=15%  Similarity=0.211  Sum_probs=58.5

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhch
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGV   75 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~   75 (85)
                      ..||++|.+.... |+..+|+|++|+++||+.+ |+.|+..-++.++.+.+..+++...|.++|+...
T Consensus       462 vkWMslEal~n~~-yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf  528 (563)
T KOG1024|consen  462 VKWMSLEALQNSH-YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELF  528 (563)
T ss_pred             ccccCHHHHhhhh-hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCCCCcHHHH
Confidence            3589999998887 9999999999999999987 9999999999999999988988888888886543

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.17  E-value=2.2e-10  Score=61.99  Aligned_cols=75  Identities=17%  Similarity=0.306  Sum_probs=53.5

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++..|++||++.... ++.+.|+|++|++++++++ |..||.+.+....+..+......+.+...+....+.+..++
T Consensus       166 ~~~~~~~PE~~~~~~-~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  241 (261)
T cd05148         166 IPYKWTAPEAASHGT-FSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECW  241 (261)
T ss_pred             CceEecCHHHHccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHc
Confidence            345699999987665 7888999999999999998 89999888877777766655444444444444444443333

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.17  E-value=1.6e-10  Score=63.56  Aligned_cols=61  Identities=56%  Similarity=1.030  Sum_probs=48.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ..++..|++||.+.+....+...|+|++|++++++++|..||.+......+.++....+.+
T Consensus       166 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~  226 (293)
T cd07843         166 LVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTP  226 (293)
T ss_pred             ccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            3467789999998765446788999999999999999999999888877777766554433

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=1.2e-10  Score=63.19  Aligned_cols=78  Identities=23%  Similarity=0.250  Sum_probs=52.3

Q ss_pred             CccccccccCchhhhcc----ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          4 WKKVRKAFMAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ...|+..|+|||++...    ..++.+.|+|++|++++++++|..||.+.........+...  .++....+...++++.
T Consensus       172 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  249 (275)
T cd06608         172 TFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN--PPPTLKSPENWSKKFN  249 (275)
T ss_pred             CccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc--CCCCCCchhhcCHHHH
Confidence            34578889999987532    23667899999999999999999999877666655555433  1222222333455555


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus       250 ~li~  253 (275)
T cd06608         250 DFIS  253 (275)
T ss_pred             HHHH
Confidence            5554

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.17  E-value=1.7e-10  Score=63.08  Aligned_cols=53  Identities=25%  Similarity=0.317  Sum_probs=43.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI   58 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i   58 (85)
                      ..++..|++||++.+.. .+.+.|+|++|++++++++|..||.+.++......+
T Consensus       161 ~~~~~~y~apE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~  213 (277)
T cd06640         161 FVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI  213 (277)
T ss_pred             ccCcccccCHhHhccCC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh
Confidence            45778899999987766 788899999999999999999999877766555443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.16  E-value=3.3e-10  Score=62.12  Aligned_cols=53  Identities=23%  Similarity=0.293  Sum_probs=43.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHH
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~   59 (85)
                      .++..|++||.+.+.. ++.+.|+|++|+++|++++ |..||.+.........+.
T Consensus       172 ~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~  225 (279)
T cd05111         172 KTPIKWMALESILFGR-YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE  225 (279)
T ss_pred             CCcccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            3566799999987766 8889999999999999997 999998877665544443

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.16  E-value=7.8e-11  Score=64.80  Aligned_cols=45  Identities=27%  Similarity=0.587  Sum_probs=39.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..|+..|+|||++.... ++.+.|+|++|++++++++|..||.+..
T Consensus       161 ~~g~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~  205 (285)
T cd05630         161 RVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRK  205 (285)
T ss_pred             CCCCccccChHHHcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence            46888999999987766 8888999999999999999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.16  E-value=3.1e-10  Score=61.58  Aligned_cols=71  Identities=15%  Similarity=0.223  Sum_probs=51.1

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      +..|++||.+.... ++.+.|+|++|++++++++ |..||.+....+....+.++...+    .|...+.++.++++
T Consensus       161 ~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~  232 (257)
T cd05115         161 PLKWYAPECINFRK-FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLD----CPAECPPEMYALMK  232 (257)
T ss_pred             CcccCCHHHHccCC-CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC----CCCCCCHHHHHHHH
Confidence            45799999987665 7888999999999999986 999998888777766665543332    23333444444443

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.16  E-value=6.1e-11  Score=64.41  Aligned_cols=51  Identities=27%  Similarity=0.251  Sum_probs=39.7

Q ss_pred             ccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHH
Q psy13989          5 KKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL   55 (85)
Q Consensus         5 ~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~   55 (85)
                      ..|+..|++||.+..  ...++...|+|++|++++++++|..||....+....
T Consensus       166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~  218 (267)
T cd06646         166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL  218 (267)
T ss_pred             cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh
Confidence            457888999998742  222667899999999999999999998766554443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.16  E-value=1.4e-10  Score=63.78  Aligned_cols=55  Identities=22%  Similarity=0.322  Sum_probs=42.4

Q ss_pred             ccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         5 ~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      ..++..|++||++..    ...++.++|+|++|+++|++++|..||...+.......+.
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~  228 (292)
T cd06644         170 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA  228 (292)
T ss_pred             ecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHh
Confidence            457788999998752    2226778999999999999999999998777655554443

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.16  E-value=3.5e-10  Score=61.27  Aligned_cols=56  Identities=25%  Similarity=0.441  Sum_probs=46.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ...++..|++||.+.+.. ++.+.|+|++|++++++++|..||.+.+.......+..
T Consensus       152 ~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  207 (260)
T cd05611         152 KFVGTPDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS  207 (260)
T ss_pred             cCCCCcCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            346788899999987766 78899999999999999999999988877766665544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.16  E-value=3.1e-10  Score=61.37  Aligned_cols=53  Identities=17%  Similarity=0.342  Sum_probs=44.6

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+..+....+...
T Consensus       164 ~~~y~aPE~~~~~~-~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~  217 (256)
T cd05114         164 PVKWSPPEVFNFSK-YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG  217 (256)
T ss_pred             chhhCChhhcccCc-cchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC
Confidence            45699999987665 8889999999999999998 89999888877777776554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.16  E-value=3.4e-10  Score=63.59  Aligned_cols=47  Identities=26%  Similarity=0.480  Sum_probs=40.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ...|+..|+|||++.+.. ++.+.|+|++|++++++++|..||.....
T Consensus       161 ~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~  207 (333)
T cd06650         161 SFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAIGRYPIPPPDA  207 (333)
T ss_pred             cCCCCccccCHHHhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcch
Confidence            456889999999987765 88889999999999999999999976544

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.16  E-value=1.3e-10  Score=63.02  Aligned_cols=78  Identities=32%  Similarity=0.524  Sum_probs=50.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..|+..|++||.+.+.. ++...|+|++|++++++++|..||...........+............+...+..+.+++.
T Consensus       168 ~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  245 (268)
T cd06630         168 LLGTIAFMAPEVLRGEQ-YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTL  245 (268)
T ss_pred             cccccceeCHhHhccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHH
Confidence            45777899999987665 7888999999999999999999996554333333332221112223344445555555543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.16  E-value=3.7e-10  Score=61.02  Aligned_cols=75  Identities=24%  Similarity=0.347  Sum_probs=52.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ...++..|++||++.... ++...|+|++|++++++++|..||.+.+.......+....    ....+...+..+.++++
T Consensus       169 ~~~~~~~~~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~  243 (265)
T cd08217         169 TYVGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK----FRRIPYRYSSELNEVIK  243 (265)
T ss_pred             ccccCCCccChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC----CCCCccccCHHHHHHHH
Confidence            346788999999987766 7888999999999999999999998877555444443322    12234344445555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.16  E-value=2.3e-10  Score=62.38  Aligned_cols=55  Identities=22%  Similarity=0.366  Sum_probs=44.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..++..|++||.+.... ++.++|+|++|++++++++ |..||.+.+.......+..
T Consensus       181 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  236 (277)
T cd05032         181 GLLPVRWMAPESLKDGV-FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID  236 (277)
T ss_pred             CCccccccCHHHHhcCC-CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc
Confidence            34567799999987665 7888999999999999997 8999988887776666553

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.16  E-value=2.2e-10  Score=61.84  Aligned_cols=56  Identities=18%  Similarity=0.367  Sum_probs=45.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..|++.|++||+..+.. .+.+.|+|++|++++++++|..||...........+...
T Consensus       161 ~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  216 (256)
T cd08218         161 CIGTPYYLSPEICENRP-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG  216 (256)
T ss_pred             ccCCccccCHHHhCCCC-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC
Confidence            35778899999987765 777899999999999999999999877776666565544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.16  E-value=1.9e-10  Score=64.73  Aligned_cols=62  Identities=37%  Similarity=0.753  Sum_probs=49.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ...++..|++||++.....++.+.|+|++|++++++++|..||.+.+....+..+....+.+
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~  235 (343)
T cd07851         174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTP  235 (343)
T ss_pred             CCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Confidence            34578889999998654347788999999999999999999999888777777766554433

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.15  E-value=1.6e-10  Score=64.51  Aligned_cols=64  Identities=47%  Similarity=0.839  Sum_probs=52.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      ...++..|++||++.+...++...|+|++|++++++++|..||.+.+....+..+....+.+++
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  228 (330)
T cd07834         165 EYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSE  228 (330)
T ss_pred             ccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCCh
Confidence            3457888999999877633888899999999999999999999998887777777666555443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.15  E-value=1.4e-10  Score=63.45  Aligned_cols=53  Identities=25%  Similarity=0.292  Sum_probs=41.4

Q ss_pred             CccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHH
Q psy13989          4 WKKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLT   56 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~   56 (85)
                      ..+|++.|+|||++..    ...++.+.|+|++|++++++++|..||....+.....
T Consensus       180 ~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~  236 (282)
T cd06636         180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF  236 (282)
T ss_pred             cccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh
Confidence            3567889999998752    2236778999999999999999999997766554443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.15  E-value=1.9e-10  Score=65.95  Aligned_cols=44  Identities=30%  Similarity=0.359  Sum_probs=38.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+
T Consensus       242 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~p~~~  285 (391)
T PHA03212        242 GWAGTIATNAPELLARDP-YGPAVDIWSAGIVLFEMATCHDSLFE  285 (391)
T ss_pred             cccCccCCCChhhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            357999999999988776 88999999999999999999877654

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.15  E-value=2.9e-10  Score=62.81  Aligned_cols=61  Identities=41%  Similarity=0.760  Sum_probs=47.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ..++..|+|||.+.+...++.+.|+|++|++++++++|..+|.+.+.......+.+..+..
T Consensus       183 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~  243 (310)
T cd07865         183 RVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI  243 (310)
T ss_pred             cccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            3467789999988665446778999999999999999999998888766666555544433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.15  E-value=1.6e-10  Score=62.60  Aligned_cols=57  Identities=23%  Similarity=0.261  Sum_probs=45.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+|+..|++||++.....++.+.|+|++|++++++++|..||...+....+..+.+
T Consensus       165 ~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~  221 (267)
T cd06610         165 TFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ  221 (267)
T ss_pred             cccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc
Confidence            346888899999987663378889999999999999999999988776655555443

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.15  E-value=2.2e-10  Score=64.67  Aligned_cols=61  Identities=36%  Similarity=0.787  Sum_probs=50.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ...++..|++||.+.+.. ++.+.|+|++|++++++++|..||.+.+....+..+...++.|
T Consensus       176 ~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  236 (353)
T cd07850         176 PYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTP  236 (353)
T ss_pred             CCcccccccCHHHHhCCC-CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            345788899999998776 8889999999999999999999999888777776666555444

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.15  E-value=1.8e-10  Score=64.88  Aligned_cols=57  Identities=35%  Similarity=0.697  Sum_probs=46.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..++..|++||++.+...++.++|+|++|++++++++|..||.+.+....+..+...
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~  230 (342)
T cd07879         174 YVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV  230 (342)
T ss_pred             ceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            457788999999876433788899999999999999999999988776666555543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.15  E-value=2.1e-10  Score=61.88  Aligned_cols=50  Identities=20%  Similarity=0.327  Sum_probs=41.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL   55 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~   55 (85)
                      ..++..|++||++.+.. ++.+.|+|++|++++++++|..||....+....
T Consensus       159 ~~~~~~y~~PE~~~~~~-~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~  208 (256)
T cd06612         159 VIGTPFWMAPEVIQEIG-YNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI  208 (256)
T ss_pred             ccCCccccCHHHHhcCC-CCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh
Confidence            34677899999987765 888899999999999999999999876655443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.15  E-value=1.3e-10  Score=65.18  Aligned_cols=58  Identities=43%  Similarity=0.907  Sum_probs=46.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      +.|+..|++||++.+...++...|+|++|++++++++|..||.+........++....
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~  229 (337)
T cd07852         172 YVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVI  229 (337)
T ss_pred             ccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            4578889999987664447788999999999999999999998887766666655543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.15  E-value=3e-10  Score=62.09  Aligned_cols=67  Identities=43%  Similarity=1.007  Sum_probs=51.3

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ..++..|++||.+.+...++.+.|+|++|++++++++|..||.+.+.......+....+.+....|+
T Consensus       161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07840         161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP  227 (287)
T ss_pred             cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence            3457789999987654447788999999999999999999999888777776666655545444443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.14  E-value=4.1e-10  Score=60.68  Aligned_cols=74  Identities=26%  Similarity=0.403  Sum_probs=53.3

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..++..|++||.+.... ++.+.|+|++|++++++++ |..||.+.........+.......    .+...+.++.+++.
T Consensus       167 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~  241 (262)
T cd00192         167 GKLPIRWMAPESLKDGI-FTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLP----KPEYCPDELYELML  241 (262)
T ss_pred             CCcCccccCHHHhccCC-cchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC----CCccCChHHHHHHH
Confidence            45677899999987765 8889999999999999998 699998887777766665433222    23333444544443

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.14  E-value=1.3e-10  Score=65.61  Aligned_cols=46  Identities=24%  Similarity=0.261  Sum_probs=36.8

Q ss_pred             CccccccccCchhhhcc----ccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..+||..|++||++...    ...+.++|+|++|+++|++++|..||...
T Consensus       227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  276 (353)
T PLN00034        227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVG  276 (353)
T ss_pred             ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence            45789999999987431    22345789999999999999999999643

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.14  E-value=3.2e-10  Score=61.62  Aligned_cols=53  Identities=23%  Similarity=0.493  Sum_probs=43.1

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      ++..|++||++.+.. ++.+.|+|++|++++++++ |..||...+.......+..
T Consensus       175 ~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  228 (269)
T cd05044         175 LPVRWMAPESLLDGK-FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA  228 (269)
T ss_pred             CCccccCHHHHccCC-cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence            356799999987766 8889999999999999997 9999987777666555543

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.14  E-value=4.8e-10  Score=60.96  Aligned_cols=63  Identities=17%  Similarity=0.308  Sum_probs=47.5

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ..|++||++.... ++.+.|+|++|++++++++ |..||...+..+....+......+.....+.
T Consensus       174 ~~y~~PE~~~~~~-~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~  237 (268)
T cd05063         174 IRWTAPEAIAYRK-FTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPS  237 (268)
T ss_pred             ceecCHHHhhcCC-cChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCH
Confidence            3599999987765 7889999999999999887 9999988877777766655433343333343

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.14  E-value=4.6e-10  Score=60.79  Aligned_cols=53  Identities=26%  Similarity=0.474  Sum_probs=41.4

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      ++..|++||...... ++.+.|+|++|++++++++ +.+||...+.......+..
T Consensus       164 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~  217 (262)
T cd05058         164 LPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ  217 (262)
T ss_pred             CCccccChhHhccCc-cchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc
Confidence            456799999987766 8889999999999999998 5677877666555554443

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0199|consensus

Probab=99.14  E-value=1.3e-10  Score=70.43  Aligned_cols=71  Identities=20%  Similarity=0.310  Sum_probs=57.9

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ...|.|||.+...+ |++..|+|.+|+.+|||++ |..||.|.....++++|..+-+.+-+..    +++++++++.
T Consensus       278 PfAWCaPEsLrh~k-FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~----csedIY~imk  349 (1039)
T KOG0199|consen  278 PFAWCAPESLRHRK-FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKY----CSEDIYQIMK  349 (1039)
T ss_pred             cccccCHhHhcccc-ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCC----ChHHHHHHHH
Confidence            45699999998888 9999999999999999998 8899999999999999986655554444    4555555543

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.14  E-value=2.8e-10  Score=62.49  Aligned_cols=46  Identities=24%  Similarity=0.352  Sum_probs=38.9

Q ss_pred             ccccccccCchhhhcc--ccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~--~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..|+..|++||++...  ..++..+|+|++|++++++++|..||....
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  214 (288)
T cd06616         167 DAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN  214 (288)
T ss_pred             ccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc
Confidence            4578889999998765  237888999999999999999999997654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.14  E-value=5.2e-10  Score=61.57  Aligned_cols=56  Identities=21%  Similarity=0.361  Sum_probs=45.4

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcC
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ++..|++||.+.+.. ++...|+|++|++++++++ |..||.+..+....+.+.....
T Consensus       191 ~~~~y~apE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~  247 (290)
T cd05045         191 IPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR  247 (290)
T ss_pred             CCccccCHHHHccCC-cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC
Confidence            456799999987666 7888999999999999998 9999988887776666554433

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.14  E-value=3.5e-10  Score=61.94  Aligned_cols=56  Identities=46%  Similarity=0.819  Sum_probs=45.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      ...++..|++||++.....++.+.|+|++|++++++++|..||.+......+..+.
T Consensus       160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~  215 (288)
T cd07833         160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQ  215 (288)
T ss_pred             CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            35577889999998877338889999999999999999999998876655544443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.14  E-value=1.9e-10  Score=71.48  Aligned_cols=48  Identities=23%  Similarity=0.316  Sum_probs=42.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLD   53 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~   53 (85)
                      .+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.....
T Consensus       191 ~vGT~~YmAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        191 IVGTPDYMAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             CCCCCCCCCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            57999999999988776 8889999999999999999999998765433

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.13  E-value=4.5e-10  Score=60.48  Aligned_cols=54  Identities=22%  Similarity=0.356  Sum_probs=43.4

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhc
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      +..|++||++.... ++.+.|+|++|++++++++ |..||.+.........+....
T Consensus       157 ~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~  211 (250)
T cd05085         157 PIKWTAPEALNYGR-YSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY  211 (250)
T ss_pred             cccccCHHHhccCC-CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC
Confidence            45699999987665 7788999999999999998 899998887766666655443

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0586|consensus

Probab=99.13  E-value=8.6e-12  Score=73.44  Aligned_cols=61  Identities=21%  Similarity=0.388  Sum_probs=51.4

Q ss_pred             CCCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          1 MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         1 ~~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      |-.++||++.|.|||++.+..+....+|+|++|+++|.++.|..||.|.+-.+.-.+.+.+
T Consensus       210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g  270 (596)
T KOG0586|consen  210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG  270 (596)
T ss_pred             cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee
Confidence            3468999999999999998886778899999999999999999999988766555555443

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.13  E-value=4.7e-10  Score=60.50  Aligned_cols=55  Identities=24%  Similarity=0.437  Sum_probs=44.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..++..|++||.+.... ++.+.|+|++|++++++++|..||.+.+.......+..
T Consensus       161 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~  215 (256)
T cd08220         161 VVGTPCYISPELCEGKP-YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS  215 (256)
T ss_pred             cccCCcccCchhccCCC-CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh
Confidence            45778899999987765 77889999999999999999999988776665555544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.13  E-value=2.7e-10  Score=62.32  Aligned_cols=63  Identities=40%  Similarity=0.815  Sum_probs=50.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      ..++..|++||++.....++...|+|++|++++++++|..+|.+.........+....+.+..
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~  220 (283)
T cd07830         158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTK  220 (283)
T ss_pred             CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCCh
Confidence            457788999998865444778899999999999999999999888877777666665554443

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.13  E-value=3.7e-10  Score=61.13  Aligned_cols=52  Identities=15%  Similarity=0.236  Sum_probs=42.5

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..|++||.+.... ++.+.|+|++|++++++++ |..||...+..+....+.+.
T Consensus       162 ~~y~aPE~~~~~~-~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~  214 (257)
T cd05060         162 LKWYAPECINYGK-FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG  214 (257)
T ss_pred             ccccCHHHhcCCC-CCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence            4699999987666 8889999999999999997 99999877776666555443

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.13  E-value=2.7e-10  Score=62.33  Aligned_cols=57  Identities=40%  Similarity=0.813  Sum_probs=48.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ..++..|++||++.+.. ++.+.|+|++|++++++++|.++|.+....+.+.++....
T Consensus       166 ~~~~~~~~~PE~~~~~~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  222 (287)
T cd07838         166 VVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVI  222 (287)
T ss_pred             ccccccccChHHhccCC-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHc
Confidence            34677899999987766 7888999999999999999999999988887777776543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.13  E-value=3.1e-10  Score=62.54  Aligned_cols=62  Identities=68%  Similarity=1.286  Sum_probs=48.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      .+++.|++||.+.+...++...|+|++|++++++++|.++|.+..+.+.+.++......+..
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  224 (298)
T cd07841         163 VVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTE  224 (298)
T ss_pred             ccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCch
Confidence            35677999999865444788899999999999999998889888877777666555444433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.13  E-value=2.2e-10  Score=65.35  Aligned_cols=52  Identities=25%  Similarity=0.493  Sum_probs=40.9

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHH
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~   59 (85)
                      ++..|+|||++.... ++.++|+|++|++++++++ |..||.+.........+.
T Consensus       276 ~~~~y~aPE~~~~~~-~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~  328 (374)
T cd05106         276 LPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV  328 (374)
T ss_pred             CccceeCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH
Confidence            345699999987766 8889999999999999997 999998766544443333

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.13  E-value=3.4e-10  Score=63.76  Aligned_cols=55  Identities=38%  Similarity=0.770  Sum_probs=44.7

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      .++..|+|||++.....++.++|+|++|++++++++|..||.+.++......+..
T Consensus       179 ~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~  233 (342)
T cd07854         179 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE  233 (342)
T ss_pred             cccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            4677899999876544477889999999999999999999988877666555443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.13  E-value=3.7e-10  Score=61.20  Aligned_cols=58  Identities=17%  Similarity=0.303  Sum_probs=46.1

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ++..|++||...+.. ++.+.|+|++|++++++++ |..||...+.......+......+
T Consensus       163 ~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~  221 (256)
T cd05113         163 FPVRWSPPEVLLYSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY  221 (256)
T ss_pred             cChhhCCHHHHhcCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC
Confidence            345699999987666 7888999999999999998 899998777766666666554433

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.13  E-value=5.8e-10  Score=60.74  Aligned_cols=68  Identities=24%  Similarity=0.337  Sum_probs=48.8

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~   76 (85)
                      +..|++||.+.... ++...|+|++|++++++++ |..||.+....+....+......+.+...|....+
T Consensus       171 ~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (270)
T cd05056         171 PIKWMAPESINFRR-FTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS  239 (270)
T ss_pred             cccccChhhhccCC-CCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHH
Confidence            35799999987665 7888999999999999886 99999888777666666544333333334433333

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.13  E-value=3.7e-10  Score=61.36  Aligned_cols=72  Identities=17%  Similarity=0.253  Sum_probs=52.4

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      +..|++||.+.+.. ++...|+|++|++++++++ |..||...........+......+.+...+....+.+..
T Consensus       171 ~~~y~~Pe~~~~~~-~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  243 (266)
T cd05033         171 PIRWTAPEAIAYRK-FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLD  243 (266)
T ss_pred             CccccChhhhccCC-CccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            45699999987766 7888999999999999887 999998877777776666554445444444444433333

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.13  E-value=6.2e-10  Score=60.22  Aligned_cols=54  Identities=20%  Similarity=0.344  Sum_probs=43.2

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|++||++.... ++.+.|+|++|++++++++ |..||...........+.+.
T Consensus       161 ~~~~y~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~  215 (256)
T cd05082         161 LPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG  215 (256)
T ss_pred             cceeecCHHHHccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC
Confidence            455799999987665 7788999999999999997 89999877766666555443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.13  E-value=3.3e-10  Score=63.91  Aligned_cols=57  Identities=33%  Similarity=0.698  Sum_probs=45.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..++..|++||++.+...++.+.|+|++|++++++++|..||.+.+....+..+...
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  233 (345)
T cd07877         177 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL  233 (345)
T ss_pred             cccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            457888999999876434788899999999999999999999887766665555443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.13  E-value=4.6e-10  Score=61.58  Aligned_cols=78  Identities=21%  Similarity=0.302  Sum_probs=50.6

Q ss_pred             ccccccccCchhhhccc-----cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          5 KKVRKAFMAPELLFGAR-----MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~-----~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ..++..|++||.+.+..     .++...|+|++|++++++++|..||...........+....... +...+...+.++.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  239 (286)
T cd06622         161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD-PPTLPSGYSDDAQ  239 (286)
T ss_pred             CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC-CCCCCcccCHHHH
Confidence            45777899999875432     14678999999999999999999997765544444433322222 2223333555555


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus       240 ~li~  243 (286)
T cd06622         240 DFVA  243 (286)
T ss_pred             HHHH
Confidence            5554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.12  E-value=6.4e-10  Score=60.54  Aligned_cols=54  Identities=20%  Similarity=0.309  Sum_probs=44.2

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +++.|++||...... ++...|+|++|++++++++ |..||.+.........+...
T Consensus       176 ~~~~~~~pe~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  230 (272)
T cd05075         176 MPVKWIAIESLADRV-YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG  230 (272)
T ss_pred             CCcccCCHHHccCCC-cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            456799999987765 8889999999999999998 88999887777666666544

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.12  E-value=3.3e-10  Score=63.78  Aligned_cols=48  Identities=27%  Similarity=0.538  Sum_probs=39.5

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHH
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQL   55 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~   55 (85)
                      ++..|+|||++.+.. ++.++|+|++|++++++++ |..||.+....+.+
T Consensus       237 ~~~~y~aPE~~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~  285 (337)
T cd05054         237 LPLKWMAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEF  285 (337)
T ss_pred             CCccccCcHHhcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHH
Confidence            456799999988876 8889999999999999997 99999875543433

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.12  E-value=3.5e-10  Score=62.20  Aligned_cols=55  Identities=25%  Similarity=0.318  Sum_probs=43.1

Q ss_pred             ccccccccCchhhhccc----cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGAR----MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~----~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      ..|+..|++||++....    .++.+.|+|++|++++++++|..||...++...+..+.
T Consensus       188 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~  246 (291)
T cd06639         188 SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIP  246 (291)
T ss_pred             ccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHh
Confidence            45778899999875432    25678999999999999999999998877666555443

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.12  E-value=5.3e-10  Score=61.48  Aligned_cols=62  Identities=42%  Similarity=0.861  Sum_probs=45.5

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC-hHHHHHHHHhhcCCCCC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES-DLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~   67 (85)
                      .++..|++||++.+...++...|+|++|++++++++|..||.+.. ..+.+..+...++.+.+
T Consensus       164 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (291)
T cd07844         164 VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTE  226 (291)
T ss_pred             ccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCCh
Confidence            456789999998764447788999999999999999999997765 44444444444444333

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.12  E-value=4.7e-10  Score=60.98  Aligned_cols=72  Identities=19%  Similarity=0.285  Sum_probs=50.7

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ++..|++||++.... ++.+.|+|++|++++++++ |..||.+....+.+..+.......    .+...+..+.++++
T Consensus       177 ~~~~~~~pe~~~~~~-~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~  249 (273)
T cd05035         177 MPVKWIAIESLADRV-YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK----QPEDCLDELYDLMY  249 (273)
T ss_pred             CCccccCHhhcccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----CCcCCCHHHHHHHH
Confidence            345789999986665 8888999999999999998 889998877766665554432222    23334445555443

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.12  E-value=1.5e-10  Score=64.00  Aligned_cols=49  Identities=27%  Similarity=0.477  Sum_probs=41.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQ   54 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~   54 (85)
                      ..+++.|++||.+.+.. ++.+.|+|++|++++++++|..||.+.++...
T Consensus       175 ~~~~~~y~aPE~~~~~~-~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~  223 (297)
T cd06656         175 MVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (297)
T ss_pred             ccCCccccCHHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh
Confidence            46788999999987765 78889999999999999999999987665443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.11  E-value=2.8e-10  Score=62.45  Aligned_cols=46  Identities=24%  Similarity=0.452  Sum_probs=38.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..|+..|++||.+.....++.+.|+|++|++++++++|..||.+..
T Consensus       155 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  200 (279)
T cd05633         155 SVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK  200 (279)
T ss_pred             cCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCC
Confidence            4688999999998643337888999999999999999999997543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.11  E-value=7.3e-10  Score=60.29  Aligned_cols=58  Identities=24%  Similarity=0.438  Sum_probs=47.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ...|+..|++||++.+.. ++...|+|++|+++|++++|..||...........+....
T Consensus       172 ~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~  229 (269)
T cd08528         172 SVVGTILYSCPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAV  229 (269)
T ss_pred             cccCcccCcChhhhcCCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhcc
Confidence            345788899999987766 8889999999999999999999998777666665555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.11  E-value=7.2e-10  Score=61.17  Aligned_cols=63  Identities=37%  Similarity=0.720  Sum_probs=48.6

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED   68 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   68 (85)
                      .++..|++||.+.+...++...|+|++|++++++++|..||...+....+..+.+..+.+.+.
T Consensus       178 ~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (302)
T cd07864         178 VITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPA  240 (302)
T ss_pred             eeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence            356679999988654336788999999999999999999998887777776666654444443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0193|consensus

Probab=99.11  E-value=3.2e-11  Score=71.37  Aligned_cols=76  Identities=17%  Similarity=0.138  Sum_probs=58.5

Q ss_pred             ccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          7 VRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         7 gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      |...|||||++..  ..+|+...|++++|++.||+++|..||...+...++.++.+++..|.....-....+++++++
T Consensus       552 gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll  629 (678)
T KOG0193|consen  552 GSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLL  629 (678)
T ss_pred             cchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHH
Confidence            5677999999863  224899999999999999999999999977777777777777666766655555555555544

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.11  E-value=4.1e-10  Score=61.28  Aligned_cols=70  Identities=21%  Similarity=0.276  Sum_probs=51.4

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ..|++||.+.... ++.+.|+|++|++++++++ |..||.+.+..+....+......+.+...|......+.
T Consensus       175 ~~y~~PE~~~~~~-~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~  245 (269)
T cd05065         175 IRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLML  245 (269)
T ss_pred             eeecCHhHhccCc-ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHH
Confidence            3689999987766 7889999999999999876 99999888777777666555444544555544443333

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.11  E-value=7.3e-10  Score=61.36  Aligned_cols=54  Identities=24%  Similarity=0.449  Sum_probs=43.7

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+...
T Consensus       201 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  255 (304)
T cd05101         201 LPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG  255 (304)
T ss_pred             CCceeeCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence            456799999987766 8888999999999999997 78889887776666665443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.11  E-value=8.2e-10  Score=59.59  Aligned_cols=55  Identities=22%  Similarity=0.419  Sum_probs=44.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..|++.|++||+..... ++...|+|++|++++++++|..||.+.+.......+..
T Consensus       162 ~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  216 (257)
T cd08225         162 CVGTPYYLSPEICQNRP-YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ  216 (257)
T ss_pred             cCCCccccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence            35778899999987766 77889999999999999999999987766555544433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.11  E-value=7.2e-10  Score=60.66  Aligned_cols=54  Identities=19%  Similarity=0.292  Sum_probs=43.9

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|++||++.+.. ++.++|+|++|++++++++ |..||...++.+....+...
T Consensus       181 ~~~~y~apE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  235 (280)
T cd05043         181 RPVKWMALESLVNKE-YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG  235 (280)
T ss_pred             cchhccCHHHHhcCC-CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC
Confidence            455699999987766 8889999999999999998 99999887776665555443

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.11  E-value=6e-10  Score=60.97  Aligned_cols=52  Identities=21%  Similarity=0.291  Sum_probs=41.6

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      +..|++||...+.. ++.++|+|++|+++|++++ |..||.+.........+..
T Consensus       174 ~~~y~~PE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~  226 (279)
T cd05109         174 PIKWMALESILHRR-FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK  226 (279)
T ss_pred             chhhCCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence            45799999987766 8889999999999999987 8899987766555544443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.11  E-value=5.5e-10  Score=61.31  Aligned_cols=47  Identities=28%  Similarity=0.364  Sum_probs=40.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ..+|+..|++||++.... ++.+.|+|++|++++++++|..||.....
T Consensus       161 ~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~~l~tg~~p~~~~~~  207 (284)
T cd06620         161 TFVGTSTYMSPERIQGGK-YTVKSDVWSLGISIIELALGKFPFAFSNI  207 (284)
T ss_pred             ccccCcccCCHHHHccCC-CCccchHHHHHHHHHHHHhCCCCCcccch
Confidence            346888999999987665 78889999999999999999999976543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.11  E-value=6e-10  Score=63.87  Aligned_cols=46  Identities=26%  Similarity=0.329  Sum_probs=40.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...||+.|+|||++.... ++.+.|+|++|+++|++++|..||.+..
T Consensus       246 ~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~  291 (392)
T PHA03207        246 GWSGTLETNSPELLALDP-YCAKTDIWSAGLVLFEMSVKNVTLFGKQ  291 (392)
T ss_pred             ccccccCccCHhHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            357899999999998776 8889999999999999999999997764

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.10  E-value=7e-10  Score=61.81  Aligned_cols=53  Identities=19%  Similarity=0.253  Sum_probs=42.0

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||.+.... ++.++|+|++|+++|++++ |..||.+.........+...
T Consensus       174 ~~~y~apE~~~~~~-~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~  227 (316)
T cd05108         174 PIKWMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG  227 (316)
T ss_pred             ceeecChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC
Confidence            45799999987766 8889999999999999987 89999887765554444333

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.10  E-value=7.3e-10  Score=61.47  Aligned_cols=52  Identities=25%  Similarity=0.466  Sum_probs=41.2

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      +..|++||++.+.. ++...|+|++|++++++++ |..||.+.+.......+..
T Consensus       205 ~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~  257 (307)
T cd05098         205 PVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE  257 (307)
T ss_pred             ccceeChHHhccCC-CCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc
Confidence            35799999987766 7889999999999999998 8889977666555544443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.09  E-value=8.3e-10  Score=61.03  Aligned_cols=55  Identities=27%  Similarity=0.459  Sum_probs=45.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..|+..|++||.+.+.. ++.+.|+|++|++++++++|..||.+.........+..
T Consensus       176 ~~~~~~y~~pE~~~~~~-~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~  230 (292)
T cd06657         176 LVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD  230 (292)
T ss_pred             cccCccccCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            45778899999887655 77889999999999999999999988877666555443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.09  E-value=5.4e-10  Score=60.60  Aligned_cols=54  Identities=19%  Similarity=0.362  Sum_probs=43.7

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhc
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      +..|++||++.... ++...|+|++|++++++++ |..||.+.+.......+....
T Consensus       166 ~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~  220 (260)
T cd05073         166 PIKWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY  220 (260)
T ss_pred             cccccCHhHhccCC-cCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC
Confidence            45699999987665 7788999999999999998 899998887766666665543

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.09  E-value=8.9e-10  Score=61.35  Aligned_cols=53  Identities=25%  Similarity=0.439  Sum_probs=43.2

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||++.+.. ++.+.|+|++|++++++++ |..||.+.........+...
T Consensus       199 ~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  252 (314)
T cd05099         199 PVKWMAPEALFDRV-YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG  252 (314)
T ss_pred             CccccCHHHHccCC-cCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            35699999987765 8888999999999999998 88899887776666665543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.09  E-value=6e-10  Score=60.59  Aligned_cols=73  Identities=18%  Similarity=0.273  Sum_probs=54.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      .....|++||.+.... ++.+.|+|++|++++++++ +..||.+.+.......+......+.+..+|......+.
T Consensus       166 ~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  239 (259)
T PF07714_consen  166 QLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQ  239 (259)
T ss_dssp             ESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHH
T ss_pred             cccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHH
Confidence            3556789999998877 8999999999999999999 78999888888877777655554444445544444333

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.09  E-value=1.1e-09  Score=60.16  Aligned_cols=53  Identities=23%  Similarity=0.391  Sum_probs=42.8

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||++.+.. ++.++|+|++|++++++++ |..||.+.+..+....+...
T Consensus       195 ~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~  248 (288)
T cd05050         195 PIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDG  248 (288)
T ss_pred             ChhhcCHHHHhcCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC
Confidence            45699999987766 8889999999999999987 77899888777766555433

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.09  E-value=8.4e-10  Score=59.74  Aligned_cols=52  Identities=15%  Similarity=0.282  Sum_probs=42.8

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..|++||.+.+.. ++.+.|+|++|+++|++++ |..||.+.+..+....+...
T Consensus       165 ~~y~~Pe~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  217 (256)
T cd05059         165 VKWAPPEVFDYSR-FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG  217 (256)
T ss_pred             ccccCHHHhccCC-CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC
Confidence            3699999987766 8888999999999999998 88999887777666666544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.09  E-value=1.1e-09  Score=59.20  Aligned_cols=65  Identities=17%  Similarity=0.262  Sum_probs=47.5

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      +..|++||.+.+.. ++...|+|++|++++++++ |..||.+.+..+....+.+.....++...|..
T Consensus       160 ~~~y~~pe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (254)
T cd05083         160 PVKWTAPEALKHKK-FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPAD  225 (254)
T ss_pred             CceecCHHHhccCC-cCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHH
Confidence            45699999887665 8888999999999999997 99999888776666555554333333333333

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.09  E-value=8.5e-10  Score=60.17  Aligned_cols=53  Identities=21%  Similarity=0.276  Sum_probs=42.9

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||++.... ++.+.|+|++|++++++++ |..||.+.+.......+...
T Consensus       174 ~~~y~apE~~~~~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~  227 (270)
T cd05047         174 PVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  227 (270)
T ss_pred             ccccCChHHHccCC-CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC
Confidence            44699999987665 8889999999999999996 99999887776666655443

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.09  E-value=1.1e-09  Score=59.16  Aligned_cols=54  Identities=17%  Similarity=0.329  Sum_probs=43.6

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|++||.+.+.. ++.+.|+|++|++++++++ |..||...........+...
T Consensus       163 ~~~~~~aPe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  217 (256)
T cd05112         163 FPVKWSSPEVFSFSK-YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG  217 (256)
T ss_pred             cchhhcCHhHhccCC-cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC
Confidence            345799999987665 7888999999999999997 89999887776666666544

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.08  E-value=9.1e-10  Score=59.32  Aligned_cols=53  Identities=28%  Similarity=0.394  Sum_probs=42.5

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||.+.+.. ++...|+|++|++++++++ |..||.+.........+...
T Consensus       158 ~~~y~~PE~~~~~~-~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~  211 (251)
T cd05041         158 PIKWTAPEALNYGR-YTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG  211 (251)
T ss_pred             eeccCChHhhccCC-CCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC
Confidence            44599999987665 8889999999999999998 88899887766665555443

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.08  E-value=9.4e-10  Score=59.36  Aligned_cols=70  Identities=24%  Similarity=0.356  Sum_probs=48.5

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..|++||.+.+.. ++...|+|++|++++++++ |..||...........+......+.    +...+..+.++++
T Consensus       160 ~~y~aPE~~~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~  230 (252)
T cd05084         160 VKWTAPEALNYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPC----PELCPDAVYRLME  230 (252)
T ss_pred             eeecCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC----cccCCHHHHHHHH
Confidence            4599999987766 7888999999999999997 8889977776665555544333222    3333444444443

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.08  E-value=5.8e-10  Score=62.67  Aligned_cols=58  Identities=40%  Similarity=0.706  Sum_probs=45.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...++..|++||.+.....++.+.|+|++|++++++++|..||.+.+.......+...
T Consensus       167 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  224 (337)
T cd07858         167 EYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITEL  224 (337)
T ss_pred             ccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHH
Confidence            3457888999999876433788899999999999999999999887765555444443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.08  E-value=7e-10  Score=60.65  Aligned_cols=52  Identities=23%  Similarity=0.294  Sum_probs=42.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR   57 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~   57 (85)
                      ..|+..|++||.+.+.. ++.+.|+|++|++++++++|..|+....+......
T Consensus       161 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~  212 (277)
T cd06642         161 FVGTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL  212 (277)
T ss_pred             ccCcccccCHHHhCcCC-CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh
Confidence            45778899999987765 78889999999999999999999976655544433

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.08  E-value=3.3e-10  Score=62.54  Aligned_cols=50  Identities=28%  Similarity=0.494  Sum_probs=41.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL   55 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~   55 (85)
                      ..+++.|++||.+.... ++...|+|++|++++++++|..||.+.+.....
T Consensus       175 ~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~  224 (293)
T cd06647         175 MVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  224 (293)
T ss_pred             ccCChhhcCchhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe
Confidence            45778899999987665 788899999999999999999999877655443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.07  E-value=1.1e-09  Score=59.65  Aligned_cols=66  Identities=20%  Similarity=0.266  Sum_probs=48.2

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      +..|++||++.+.. ++.+.|+|++|++++++++ |..||.+....+....+......+.+...|...
T Consensus       172 ~~~y~~pe~~~~~~-~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd05066         172 PIRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAAL  238 (267)
T ss_pred             ceeecCHhHhccCc-cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHH
Confidence            35699999987766 8889999999999999886 999998877766666665554433333333333

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.07  E-value=1.1e-09  Score=61.44  Aligned_cols=53  Identities=25%  Similarity=0.448  Sum_probs=43.2

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+...
T Consensus       199 ~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  252 (334)
T cd05100         199 PVKWMAPEALFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG  252 (334)
T ss_pred             CceEcCHHHhccCC-cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            35699999987766 8888999999999999998 88899888776666655443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG4250|consensus

Probab=99.06  E-value=6.8e-11  Score=70.88  Aligned_cols=47  Identities=17%  Similarity=0.265  Sum_probs=41.4

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      -++++||..|.+||+....+.|+..+|.||+|+.+|++++|..||..
T Consensus       180 ~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  180 FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            46899999999999998534499999999999999999999988844

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.06  E-value=1.3e-09  Score=59.10  Aligned_cols=54  Identities=22%  Similarity=0.524  Sum_probs=43.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC--hHHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES--DLDQLTRIF   59 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~--~~~~~~~i~   59 (85)
                      .++++.|++||.+.... ++...|+|++|+++|++++|..||.+..  +......+.
T Consensus       152 ~~~~~~~~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  207 (262)
T cd05572         152 FCGTPEYVAPEIILNKG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL  207 (262)
T ss_pred             ccCCcCccChhHhcCCC-CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHh
Confidence            46788899999987665 7888999999999999999999998766  555554444

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.06  E-value=1.6e-09  Score=58.38  Aligned_cols=55  Identities=27%  Similarity=0.501  Sum_probs=44.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..++..|++||.+.+.. ++...|+|++|++++++++|..||...+.......+..
T Consensus       161 ~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~  215 (256)
T cd08530         161 QIGTPHYMAPEVWKGRP-YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR  215 (256)
T ss_pred             ccCCccccCHHHHCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            35778899999987766 77889999999999999999999988776655544443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.06  E-value=1.4e-09  Score=60.34  Aligned_cols=51  Identities=24%  Similarity=0.501  Sum_probs=41.1

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHH
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI   58 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i   58 (85)
                      ++..|++||.+.... ++.+.|+|++|++++++++ |..||.+..........
T Consensus       205 ~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~  256 (302)
T cd05055         205 LPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL  256 (302)
T ss_pred             cccccCCHhhhccCC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH
Confidence            456799999987766 7889999999999999997 89999877655444343

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.06  E-value=1.3e-09  Score=58.85  Aligned_cols=54  Identities=28%  Similarity=0.371  Sum_probs=44.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      .++..|++||.+.... ++...|+|++|++++++++ |..||...+..+....+..
T Consensus       161 ~~~~~y~~pE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~  215 (257)
T cd05040         161 KVPFAWCAPESLRTRT-FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK  215 (257)
T ss_pred             CCCceecCHHHhcccC-cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            4566899999987666 7888999999999999998 9999987777666655543

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0584|consensus

Probab=99.06  E-value=3e-10  Score=67.38  Aligned_cols=76  Identities=14%  Similarity=0.165  Sum_probs=56.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC-ChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      .+.+|||.|||||+.- .. |+..+|++++|+.+.||+++..||.-. ++..++.++.++.   .|..+......+.++|
T Consensus       202 ksvIGTPEFMAPEmYE-E~-YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi---KP~sl~kV~dPevr~f  276 (632)
T KOG0584|consen  202 KSVIGTPEFMAPEMYE-EN-YNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI---KPAALSKVKDPEVREF  276 (632)
T ss_pred             ceeccCccccChHHHh-hh-cchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC---CHHHhhccCCHHHHHH
Confidence            4578999999999976 33 999999999999999999999999775 4677777777653   2233344444555555


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      |.
T Consensus       277 Ie  278 (632)
T KOG0584|consen  277 IE  278 (632)
T ss_pred             HH
Confidence            53

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.05  E-value=1.5e-09  Score=60.55  Aligned_cols=57  Identities=26%  Similarity=0.374  Sum_probs=45.0

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ...|+..|++||++..  ...++...|+|++|++++++++|..||.+.+.......+..
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~  234 (313)
T cd06633         176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ  234 (313)
T ss_pred             CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence            4567888999999742  22377789999999999999999999988877666655543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.05  E-value=2.2e-09  Score=59.06  Aligned_cols=53  Identities=25%  Similarity=0.413  Sum_probs=42.7

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      ++..|++||.+.+.. ++.+.|+|++|++++++++ +..||.+....+....+..
T Consensus       183 ~~~~y~~pE~~~~~~-~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~  236 (288)
T cd05061         183 LPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD  236 (288)
T ss_pred             ccccccCHHHhccCC-CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            456799999987765 7888999999999999998 7889988777666655543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.05  E-value=2.2e-09  Score=58.15  Aligned_cols=74  Identities=26%  Similarity=0.435  Sum_probs=50.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..|++.|++||...... ++.+.|+|++|+++++++++..||.+.........+...    ..+..+...+.++.++++
T Consensus       165 ~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~  238 (260)
T cd08222         165 FTGTPYYMSPEALKHQG-YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG----PTPSLPETYSRQLNSIMQ  238 (260)
T ss_pred             CCCCcCccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC----CCCCCcchhcHHHHHHHH
Confidence            45778899999886655 777899999999999999999999776665555444332    122234444445555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.04  E-value=9.8e-10  Score=60.00  Aligned_cols=51  Identities=22%  Similarity=0.412  Sum_probs=41.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL   55 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~   55 (85)
                      ..|+..|++||.+.....++...|+|++|+++|++++|..||.+.......
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~  211 (277)
T cd06917         161 FVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM  211 (277)
T ss_pred             ccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh
Confidence            457788999999876444678899999999999999999999877654443

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.04  E-value=9.2e-10  Score=59.70  Aligned_cols=50  Identities=16%  Similarity=0.287  Sum_probs=39.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHc-CCCCCCCChHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQ   54 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~-~~~~~~~~~~~~   54 (85)
                      ..++..|++||++.+...++...|+|++|+++|++++| ..|+....+...
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~  214 (258)
T cd05078         164 LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK  214 (258)
T ss_pred             ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence            46778899999987654477889999999999999997 567766555443

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.04  E-value=1.5e-09  Score=59.38  Aligned_cols=53  Identities=21%  Similarity=0.277  Sum_probs=43.2

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||.+.... ++...|+|++|++++++++ |..||.+....+....+...
T Consensus       174 ~~~y~~PE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  227 (279)
T cd05057         174 PIKWMALESILHRI-YTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG  227 (279)
T ss_pred             cccccCHHHhhcCC-cCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC
Confidence            45699999987665 7888999999999999998 99999888776666555543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.04  E-value=1.2e-09  Score=60.66  Aligned_cols=56  Identities=25%  Similarity=0.365  Sum_probs=43.7

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      .+.++..|++||++.+  ...++.+.|+|++|+++|++++|..||.+.+.......+.
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~  227 (307)
T cd06607         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA  227 (307)
T ss_pred             CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHh
Confidence            3467788999998742  2237778999999999999999999998877666554443

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.04  E-value=2e-09  Score=58.02  Aligned_cols=56  Identities=23%  Similarity=0.437  Sum_probs=44.9

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcC
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ++..|++||.+.... ++.+.|+|++|++++++++ |..||.+.+.......+.....
T Consensus       166 ~~~~y~~Pe~~~~~~-~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~  222 (258)
T smart00219      166 LPIRWMAPESLKDGK-FTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR  222 (258)
T ss_pred             CcccccChHHhccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC
Confidence            557799999986655 7888999999999999987 8889988777777666655433

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.04  E-value=2.2e-09  Score=59.91  Aligned_cols=58  Identities=26%  Similarity=0.371  Sum_probs=45.4

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...|+..|++||++..  ...++.+.|+|++|++++++++|..||.+.+.......+...
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~  239 (317)
T cd06635         180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  239 (317)
T ss_pred             cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence            3467888999999742  223777899999999999999999999887766666665543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.04  E-value=1.7e-09  Score=58.33  Aligned_cols=77  Identities=21%  Similarity=0.308  Sum_probs=51.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ...|+..|++||.+.....++...|+|++|++++++++|..||...........+...   ......+...+..+.++++
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~  236 (258)
T cd06632         160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS---KELPPIPDHLSDEAKDFIL  236 (258)
T ss_pred             ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc---ccCCCcCCCcCHHHHHHHH
Confidence            4557888999999755433678899999999999999999999776655544444331   1122234444455555544

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.04  E-value=2.5e-09  Score=59.30  Aligned_cols=51  Identities=20%  Similarity=0.279  Sum_probs=40.5

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHH
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI   58 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i   58 (85)
                      ++..|++||++.+.. ++.+.|+|++|++++++++ |..||.+.........+
T Consensus       173 ~~~~y~~PE~~~~~~-~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~  224 (303)
T cd05110         173 MPIKWMALECIHYRK-FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL  224 (303)
T ss_pred             cccccCCHHHhccCC-CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            456799999987766 8888999999999999987 88999877655444333

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.04  E-value=1.6e-09  Score=59.49  Aligned_cols=53  Identities=28%  Similarity=0.431  Sum_probs=43.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI   58 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i   58 (85)
                      ..++..|++||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+
T Consensus       176 ~~~~~~y~~PE~~~~~~-~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~  228 (286)
T cd06614         176 VVGTPYWMAPEVIKRKD-YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI  228 (286)
T ss_pred             ccCCcccCCHhHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            34677899999987665 788899999999999999999999877765555444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.04  E-value=7.9e-10  Score=60.61  Aligned_cols=53  Identities=25%  Similarity=0.344  Sum_probs=41.5

Q ss_pred             ccccccccCchhhhcc----ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR   57 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~   57 (85)
                      ..|+..|+|||++...    ..++.+.|+|++|++++++++|..||.+......+..
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~  240 (286)
T cd06638         184 SVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK  240 (286)
T ss_pred             ccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh
Confidence            4578889999987531    2367789999999999999999999987766555433

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.03  E-value=1.4e-09  Score=59.09  Aligned_cols=45  Identities=22%  Similarity=0.516  Sum_probs=39.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      .+|+..|++||++.+.. ++.+.|+|++|++++++++|..||.+..
T Consensus       166 ~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08229         166 LVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             ccCCcCccCHHHhcCCC-ccchhhHHHHHHHHHHHHhCCCCccccc
Confidence            46788899999987766 7788999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.03  E-value=3.2e-09  Score=57.88  Aligned_cols=77  Identities=23%  Similarity=0.400  Sum_probs=53.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.++..|++||+..... .+...|+|++|++++++++|..||........+..+..... ..+..++......+..++
T Consensus       181 ~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l  257 (280)
T cd05581         181 SFVGTAEYVSPELLNEKP-AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY-SFPPNFPPDAKDLIEKLL  257 (280)
T ss_pred             cccCCccccCHHHhCCCC-CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC-CCCCccCHHHHHHHHHHh
Confidence            345778899999987765 77889999999999999999999988776666555543222 222334444444444443

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0576|consensus

Probab=99.03  E-value=2.5e-10  Score=68.58  Aligned_cols=82  Identities=20%  Similarity=0.112  Sum_probs=67.8

Q ss_pred             CCCccccccccCchhhh--ccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          2 QNWKKVRKAFMAPELLF--GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~--~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      +.+|+||++|||||+..  ....|+..+|+|+.|+...++..-++|.....+++.+..+.+....||...-+..++..+-
T Consensus       169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh  248 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFH  248 (829)
T ss_pred             hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHH
Confidence            56899999999999853  2334999999999999999999888888889999999888887777777766777777777


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      +|++
T Consensus       249 ~fvK  252 (829)
T KOG0576|consen  249 NFVK  252 (829)
T ss_pred             HHHH
Confidence            7764

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.03  E-value=1.3e-09  Score=60.43  Aligned_cols=52  Identities=21%  Similarity=0.289  Sum_probs=41.9

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      +..|++||++.+.. ++.+.|+|++|++++++++ |..||.+.+..+....+..
T Consensus       186 ~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  238 (303)
T cd05088         186 PVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  238 (303)
T ss_pred             cccccCHHHHhccC-CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence            45699999886665 7788999999999999998 9999988776666555543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.03  E-value=8.2e-10  Score=60.53  Aligned_cols=45  Identities=33%  Similarity=0.503  Sum_probs=39.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..+|+..|++||++.+.. ++.+.|+|++|++++++++|..||...
T Consensus       152 ~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~  196 (279)
T cd06619         152 TYVGTNAYMAPERISGEQ-YGIHSDVWSLGISFMELALGRFPYPQI  196 (279)
T ss_pred             CCCCChhhcCceeecCCC-CCCcchHHHHHHHHHHHHhCCCCchhh
Confidence            457889999999987766 888999999999999999999999653

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.03  E-value=2.4e-09  Score=58.36  Aligned_cols=54  Identities=19%  Similarity=0.324  Sum_probs=43.0

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++..|++||.+.... ++..+|+|++|++++++++ |..||.+.+.......+...
T Consensus       177 ~~~~~~~pe~~~~~~-~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  231 (273)
T cd05074         177 LPVKWLALESLADNV-YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG  231 (273)
T ss_pred             CchhhcCHhHHhcCc-cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC
Confidence            346789999887666 7888999999999999998 88999887776665555543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.02  E-value=2.2e-09  Score=57.53  Aligned_cols=55  Identities=25%  Similarity=0.361  Sum_probs=44.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      ...++..|++||.+.... .+.+.|+|++|++++++++|..||...+.......+.
T Consensus       156 ~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  210 (253)
T cd05122         156 TMVGTPYWMAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIA  210 (253)
T ss_pred             ceecCCcccCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH
Confidence            455778899999987766 7788999999999999999999998776555554443

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.02  E-value=1.8e-09  Score=58.64  Aligned_cols=45  Identities=22%  Similarity=0.516  Sum_probs=38.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..|+..|++||.+.+.. ++.+.|+|++|++++++++|..||.+..
T Consensus       166 ~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~  210 (267)
T cd08228         166 LVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             CCCCccccChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence            45778899999987766 7888999999999999999999986653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG1151|consensus

Probab=99.02  E-value=1.2e-10  Score=67.80  Aligned_cols=79  Identities=19%  Similarity=0.259  Sum_probs=52.6

Q ss_pred             CCCccccccccCchhhhcc---ccCCchhHHHhHHHHHHHHHHcCCCCCCC-ChHHHHHH--HHh--hcCCCCCCCcchh
Q psy13989          2 QNWKKVRKAFMAPELLFGA---RMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTR--IFQ--TLGTPSEDTWPTA   73 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~---~~~~~~~~~ws~g~~~~~~~~~~~~~~~~-~~~~~~~~--i~~--~~~~~~~~~~p~~   73 (85)
                      .+.+.||-||.+||.+.-.   +..+.++|+|++|+++|.++.|..||-.. ...++++.  |+.  ....|+.+    .
T Consensus       637 TSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KP----v  712 (775)
T KOG1151|consen  637 TSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKP----V  712 (775)
T ss_pred             ecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCC----c
Confidence            4678899999999987532   23778999999999999999999999322 12222221  222  12223222    4


Q ss_pred             chhhhhhhhhc
Q psy13989         74 GVKGLFSLIRA   84 (85)
Q Consensus        74 ~~~~~~~~~~~   84 (85)
                      .+.++.+||+|
T Consensus       713 VsseAkaFIRR  723 (775)
T KOG1151|consen  713 VSSEAKAFIRR  723 (775)
T ss_pred             cCHHHHHHHHH
Confidence            66777788775

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.02  E-value=2.5e-09  Score=58.53  Aligned_cols=53  Identities=25%  Similarity=0.313  Sum_probs=43.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI   58 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i   58 (85)
                      ..++..|++||.+.... .+...|+|++|++++++++|..||...........+
T Consensus       161 ~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~  213 (277)
T cd06641         161 FVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI  213 (277)
T ss_pred             ccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH
Confidence            45788899999987665 778899999999999999999999876665555444

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.02  E-value=9.3e-10  Score=60.56  Aligned_cols=53  Identities=25%  Similarity=0.448  Sum_probs=42.6

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||++.+.. ++.++|+|++|++++++++ |..||.+.........+...
T Consensus       197 ~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  250 (293)
T cd05053         197 PVKWMAPEALFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG  250 (293)
T ss_pred             CccccCHHHhccCC-cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence            45699999987766 7888999999999999987 88999887766666555443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.02  E-value=1.4e-09  Score=60.38  Aligned_cols=47  Identities=47%  Similarity=0.841  Sum_probs=39.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      .+++..|+|||++.+...++...|+|++|++++++++|..||.+...
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~  221 (316)
T cd07842         175 VVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA  221 (316)
T ss_pred             ccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence            45778899999987654478889999999999999999999976653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG1989|consensus

Probab=99.01  E-value=2.1e-10  Score=69.57  Aligned_cols=73  Identities=15%  Similarity=0.339  Sum_probs=48.5

Q ss_pred             ccccccCchhh--hccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          7 VRKAFMAPELL--FGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         7 gt~~~~ape~~--~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      -|+.|++||++  .++...+.++|+|++||++|.++....||.+.....   .+-..+..|+.+..+..+...++.+|
T Consensus       217 TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la---Ilng~Y~~P~~p~ys~~l~~LI~~mL  291 (738)
T KOG1989|consen  217 TTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA---ILNGNYSFPPFPNYSDRLKDLIRTML  291 (738)
T ss_pred             CCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee---EEeccccCCCCccHHHHHHHHHHHHh
Confidence            47899999996  233348999999999999999999999996542211   12233344444554444444444443

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.01  E-value=2.2e-09  Score=57.78  Aligned_cols=56  Identities=25%  Similarity=0.472  Sum_probs=45.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..|++.|++||...... ++...|+|++|++++++++|..||...........+...
T Consensus       163 ~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~  218 (258)
T cd08215         163 VVGTPYYLSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKG  218 (258)
T ss_pred             eeeeecccChhHhccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcC
Confidence            46788899999987766 788899999999999999999999877766666555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.01  E-value=1.7e-09  Score=60.16  Aligned_cols=57  Identities=26%  Similarity=0.381  Sum_probs=43.3

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ...++..|++||.+..  ...++.+.|+|++|++++++++|..||...+.......+..
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~  228 (308)
T cd06634         170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ  228 (308)
T ss_pred             cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh
Confidence            3457888999999753  22266789999999999999999999987766555544443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.01  E-value=3.5e-09  Score=57.66  Aligned_cols=76  Identities=17%  Similarity=0.260  Sum_probs=49.3

Q ss_pred             ccccccCchhhhc------cccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcC-CCCCCCcchhchhhh
Q psy13989          7 VRKAFMAPELLFG------ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG-TPSEDTWPTAGVKGL   78 (85)
Q Consensus         7 gt~~~~ape~~~~------~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~p~~~~~~~   78 (85)
                      ++..|+|||++..      ...++.+.|+|++|++++++++ |..||....+.+.+..+..... ..+.+.++...+..+
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (269)
T cd05042         164 VPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRW  243 (269)
T ss_pred             CcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHH
Confidence            4556999998743      1236778999999999999998 7888987776666655544322 222333344444444


Q ss_pred             hhhh
Q psy13989         79 FSLI   82 (85)
Q Consensus        79 ~~~~   82 (85)
                      .+++
T Consensus       244 ~~~~  247 (269)
T cd05042         244 YEVM  247 (269)
T ss_pred             HHHH
Confidence            4443

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.01  E-value=2.5e-09  Score=61.68  Aligned_cols=47  Identities=26%  Similarity=0.422  Sum_probs=38.6

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHH
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLD   53 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~   53 (85)
                      .++..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.....
T Consensus       300 ~~~~~y~aPE~~~~~~-~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~  347 (400)
T cd05105         300 FLPVKWMAPESIFDNL-YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS  347 (400)
T ss_pred             CCCcceEChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence            4567799999987766 8889999999999999986 888987755433

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.00  E-value=2.4e-09  Score=58.04  Aligned_cols=44  Identities=32%  Similarity=0.479  Sum_probs=38.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..++..|++||.+.+.. ++.+.|+|++|++++++++|..||...
T Consensus       159 ~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~  202 (265)
T cd06605         159 FVGTSSYMAPERIQGND-YSVKSDIWSLGLSLIELATGRFPYPPE  202 (265)
T ss_pred             ccCChhccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            45778899999987765 888999999999999999999998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.00  E-value=2.5e-09  Score=61.09  Aligned_cols=51  Identities=24%  Similarity=0.508  Sum_probs=39.9

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHH
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI   58 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i   58 (85)
                      ++..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+........+.
T Consensus       278 ~~~~y~aPE~~~~~~-~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~  329 (375)
T cd05104         278 LPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM  329 (375)
T ss_pred             CCcceeChhHhcCCC-CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH
Confidence            345699999987776 8889999999999999997 88899776544433333

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG4278|consensus

Probab=99.00  E-value=1.8e-09  Score=65.23  Aligned_cols=65  Identities=18%  Similarity=0.265  Sum_probs=56.4

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      ..|+|||.+.... ++.+.|+|++|+++|++.+ |-.||.|.+...++..+..+++.--++-+|...
T Consensus       430 IKWTAPEsLAyNt-FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkV  495 (1157)
T KOG4278|consen  430 IKWTAPESLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKV  495 (1157)
T ss_pred             ccccCcccccccc-cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHH
Confidence            4699999998888 9999999999999999987 888999999999998888888877666666544

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.99  E-value=1.6e-09  Score=59.12  Aligned_cols=62  Identities=47%  Similarity=0.996  Sum_probs=49.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      .++..|++||.+.....++.+.|+|++|++++++++|..||.+......+..+.+..+.+.+
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (282)
T cd07829         159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTE  220 (282)
T ss_pred             ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcH
Confidence            45667999999876533778899999999999999999999988877777777665544444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.99  E-value=2.9e-09  Score=57.54  Aligned_cols=55  Identities=27%  Similarity=0.612  Sum_probs=45.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..++..|++||+..... .+...|+|++|++++++++|..||....+......+..
T Consensus       161 ~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~  215 (265)
T cd05579         161 IVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN  215 (265)
T ss_pred             cccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            35677899999987766 77889999999999999999999988887776666544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.99  E-value=2.8e-09  Score=58.40  Aligned_cols=56  Identities=45%  Similarity=0.919  Sum_probs=44.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..++..|++||++.+...++.+.|+|++|++++++++|.++|.+....+....+..
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~  215 (286)
T cd07846         160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIK  215 (286)
T ss_pred             ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Confidence            45778899999987644467889999999999999999999988776665555544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.99  E-value=2.9e-09  Score=58.30  Aligned_cols=55  Identities=45%  Similarity=0.838  Sum_probs=44.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      ..++..|++||++.+...++.+.|+|++|++++++++|..||.+.+..+....+.
T Consensus       160 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~  214 (286)
T cd07847         160 YVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIR  214 (286)
T ss_pred             cccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            4567889999998764447788999999999999999999998887666555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.99  E-value=2e-09  Score=58.29  Aligned_cols=46  Identities=30%  Similarity=0.499  Sum_probs=39.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ..|+..|++||.+.... ++.+.|+|++|++++++++|..||...+.
T Consensus       159 ~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~  204 (258)
T cd05578         159 TSGTPGYMAPEVLCRQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSR  204 (258)
T ss_pred             cCCChhhcCHHHHcccC-CCCcccchhhHHHHHHHHhCCCCCCCCCc
Confidence            45778899999987766 78889999999999999999999987763

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.99  E-value=2.5e-09  Score=59.44  Aligned_cols=49  Identities=27%  Similarity=0.463  Sum_probs=41.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL   52 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~   52 (85)
                      ..++|+..|++||.+.+.. ++.+.|+|++|++++++++|..||.+.+..
T Consensus       156 ~~~~~~~~~~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~p~~~~~~~  204 (308)
T cd06615         156 NSFVGTRSYMSPERLQGTH-YTVQSDIWSLGLSLVEMAIGRYPIPPPDAK  204 (308)
T ss_pred             ccCCCCcCccChhHhcCCC-CCccchHHHHHHHHHHHHhCCCCCCCcchh
Confidence            4567889999999987665 788899999999999999999999765543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.99  E-value=3.9e-09  Score=57.11  Aligned_cols=45  Identities=22%  Similarity=0.351  Sum_probs=38.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..++..|++||.+.... ++.+.|+|++|++++++++|..||.+..
T Consensus       160 ~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~tg~~p~~~~~  204 (264)
T cd06623         160 FVGTVTYMSPERIQGES-YSYAADIWSLGLTLLECALGKFPFLPPG  204 (264)
T ss_pred             eeecccccCHhhhCCCC-CCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            35678899999987765 8889999999999999999999997764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.98  E-value=6.2e-09  Score=55.99  Aligned_cols=55  Identities=27%  Similarity=0.585  Sum_probs=44.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..++..|++||...+.. .+...|+|++|++++++++|..||...+.......+.+
T Consensus       153 ~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~  207 (250)
T cd05123         153 FCGTPEYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK  207 (250)
T ss_pred             CcCCccccChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence            45677899999987765 77889999999999999999999987776555555544

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.98  E-value=2.5e-09  Score=60.02  Aligned_cols=56  Identities=30%  Similarity=0.713  Sum_probs=43.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..++..|++||.+.....++.+.|+|++|++++++++|..||.+..+......+..
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~  220 (328)
T cd07856         165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD  220 (328)
T ss_pred             CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            45677899999876633478899999999999999999999988776554444433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.98  E-value=2.4e-09  Score=58.59  Aligned_cols=46  Identities=26%  Similarity=0.569  Sum_probs=39.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ..++..|++||++.+.. ++.+.|+|++|++++++++|..||.+...
T Consensus       154 ~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~  199 (277)
T cd05577         154 RAGTPGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKE  199 (277)
T ss_pred             ccCCCCcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcc
Confidence            34667899999987766 78889999999999999999999976543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0984|consensus

Probab=98.97  E-value=9.9e-10  Score=58.39  Aligned_cols=56  Identities=23%  Similarity=0.386  Sum_probs=45.2

Q ss_pred             ccccccccCchhhhc---cccCCchhHHHhHHHHHHHHHHcCCCCCCC-ChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFG---ARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~---~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~-~~~~~~~~i~~   60 (85)
                      -.|+..|||||.+..   ...|+.++|+||+|+.+.|+..++.||... ++.+++.++..
T Consensus       208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            357889999999753   223999999999999999999999999764 57777766654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.97  E-value=1.5e-09  Score=66.97  Aligned_cols=43  Identities=16%  Similarity=0.214  Sum_probs=37.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      .+||++|+|||++.+.. ++.++|+|++||+++|++++..++..
T Consensus       175 ~~gt~~Y~APE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~  217 (793)
T PLN00181        175 AMEMSWYTSPEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREE  217 (793)
T ss_pred             cCCCcceEChhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhh
Confidence            46899999999998877 88999999999999999998777643

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.97  E-value=6.9e-09  Score=55.82  Aligned_cols=54  Identities=28%  Similarity=0.432  Sum_probs=44.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      ..++..|++||...... .+...|+|++|++++++++|..||...+.......+.
T Consensus       159 ~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~  212 (254)
T cd06627         159 VVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV  212 (254)
T ss_pred             cccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh
Confidence            45778899999987665 7788999999999999999999998777655555544

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.96  E-value=5.7e-09  Score=60.27  Aligned_cols=52  Identities=23%  Similarity=0.396  Sum_probs=41.3

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTR   57 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~   57 (85)
                      .+++..|++||.+.+.. ++.+.|+|++|++++++++ |..||......+....
T Consensus       301 ~~~~~~y~aPE~~~~~~-~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~  353 (401)
T cd05107         301 TFLPLKWMAPESIFNNL-YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN  353 (401)
T ss_pred             cCCCCceeChHHhcCCC-CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH
Confidence            34667899999987766 7888999999999999997 8889877655554433

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.96  E-value=5.2e-09  Score=58.01  Aligned_cols=52  Identities=21%  Similarity=0.348  Sum_probs=40.7

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH--cCCCCCCCChHHHHHHH
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI   58 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~--~~~~~~~~~~~~~~~~i   58 (85)
                      .++..|+|||++.... ++.+.|+|++|++++++++  +..||.+.+....+..+
T Consensus       201 ~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~  254 (304)
T cd05096         201 VLPIRWMAWECILMGK-FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENA  254 (304)
T ss_pred             CCCccccCHHHHhcCC-CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHH
Confidence            3466799999987766 8889999999999999986  55788776665554443

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.96  E-value=4.3e-09  Score=59.38  Aligned_cols=56  Identities=36%  Similarity=0.732  Sum_probs=45.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+++.|++||++.+...++...|+|++|++++++++|..||.+.+.......+..
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~  230 (343)
T cd07880         175 YVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMK  230 (343)
T ss_pred             cccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            45678899999987643377889999999999999999999988876666555544

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.96  E-value=5.5e-09  Score=56.96  Aligned_cols=53  Identities=26%  Similarity=0.258  Sum_probs=40.0

Q ss_pred             ccccccccCchhhhccc------cCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGAR------MYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTR   57 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~------~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~   57 (85)
                      ..++..|+|||++.+..      .++.++|+|++|++++++++ |..||....+.+....
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~  221 (269)
T cd05087         162 LWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY  221 (269)
T ss_pred             cCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH
Confidence            34667799999975321      14678999999999999986 9999987766555444

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.95  E-value=5e-09  Score=57.05  Aligned_cols=49  Identities=18%  Similarity=0.285  Sum_probs=38.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHH-HcCCCCCCCChHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLD   53 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~-~~~~~~~~~~~~~   53 (85)
                      ..++..|+|||.+.....++..+|+|++|+++|+++ .|..|+.+....+
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~  217 (262)
T cd05077         168 CVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE  217 (262)
T ss_pred             ccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence            356778999998875444888999999999999997 5888887665433

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.94  E-value=6.8e-09  Score=57.15  Aligned_cols=44  Identities=27%  Similarity=0.469  Sum_probs=38.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..++..|++||.+.+.. ++.+.|+|++|+++|++++|..||...
T Consensus       163 ~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~  206 (287)
T cd06621         163 FTGTSFYMAPERIQGKP-YSITSDVWSLGLTLLEVAQNRFPFPPE  206 (287)
T ss_pred             ccCCccccCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            45677899999987665 788899999999999999999999765

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0200|consensus

Probab=98.94  E-value=3.9e-09  Score=63.71  Aligned_cols=68  Identities=21%  Similarity=0.400  Sum_probs=50.5

Q ss_pred             cccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCC-hHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989         10 AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGES-DLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus        10 ~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .|||||.+.... |..+.|+||+|+++||+.+ |..||.+.. ..+.+..+..+.+...|.    ..+.++++++
T Consensus       486 kWmApEsl~~~~-ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~----~c~~eiY~iM  555 (609)
T KOG0200|consen  486 KWMAPESLFDRV-FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPE----HCSDEIYDLM  555 (609)
T ss_pred             eecCHHHhccCc-ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCC----CCCHHHHHHH
Confidence            499999998866 9999999999999999987 889999865 555565566665544444    4455555444

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.94  E-value=6.3e-09  Score=55.93  Aligned_cols=76  Identities=22%  Similarity=0.394  Sum_probs=51.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC-hHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES-DLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...++..|.+||.+.... .+.+.|+|++|++++++++|..||.... .......+..   .......|...+..+.+++
T Consensus       162 ~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~i  237 (260)
T cd06606         162 SVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS---SGEPPEIPEHLSEEAKDFL  237 (260)
T ss_pred             CCCCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc---cCCCcCCCcccCHHHHHHH
Confidence            345778899999987766 7888999999999999999999997765 2222222221   1222334444455666655


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      .
T Consensus       238 ~  238 (260)
T cd06606         238 R  238 (260)
T ss_pred             H
Confidence            4

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.93  E-value=7.5e-09  Score=56.15  Aligned_cols=45  Identities=22%  Similarity=0.516  Sum_probs=38.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..++..|++||++.+.. ++...|+|++|++++++++|..||.+..
T Consensus       166 ~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08224         166 LVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             ecCCccccCHHHhccCC-CCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence            45778899999987766 7888999999999999999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.92  E-value=2.1e-09  Score=58.01  Aligned_cols=46  Identities=30%  Similarity=0.460  Sum_probs=40.2

Q ss_pred             CccccccccCchhhh-ccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLF-GARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~-~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...++..|++||++. ... ...+.|+|++|++++++++|..||....
T Consensus       157 ~~~~~~~y~aPE~~~~~~~-~~~~~Di~slG~il~~l~~~~~p~~~~~  203 (260)
T PF00069_consen  157 PFVGTPEYMAPEVLQQGKK-YTRKSDIWSLGIILYELLTGKLPFEESN  203 (260)
T ss_dssp             SSSSSGGGSCHHHHTTTSS-BSTHHHHHHHHHHHHHHHHSSSSSTTSS
T ss_pred             ccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            466888999999987 444 8899999999999999999999998774

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.92  E-value=1.5e-08  Score=54.83  Aligned_cols=53  Identities=19%  Similarity=0.313  Sum_probs=42.1

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..|++||.+.... ++.+.|+|++|++++++++ |..||...+.......+...
T Consensus       162 ~~~~~ape~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  215 (256)
T cd05039         162 PVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG  215 (256)
T ss_pred             cccccCchhhcCCc-CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC
Confidence            44689999987665 7788999999999999987 99999877766665555443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0194|consensus

Probab=98.91  E-value=4.6e-10  Score=65.55  Aligned_cols=67  Identities=22%  Similarity=0.406  Sum_probs=55.3

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHH-hhcCCCCCCCcchhchh
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF-QTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~p~~~~~   76 (85)
                      .-|+|||.+.... |+.+.|+|++|+++||+.+ |..||.|....++..+|. .+++.+.+..-|.....
T Consensus       326 irWLAPEtl~~~~-~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~  394 (474)
T KOG0194|consen  326 IRWLAPETLNTGI-FSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAK  394 (474)
T ss_pred             ceecChhhhccCc-cccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHH
Confidence            4699999998876 9999999999999999987 788999999999999994 46666666655554433

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.91  E-value=8.4e-09  Score=56.23  Aligned_cols=53  Identities=21%  Similarity=0.505  Sum_probs=41.1

Q ss_pred             ccccccccCchhhhccc-cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR   57 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~-~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~   57 (85)
                      ..|+..|++||++.... .++.+.|+|++|++++++++|..||...........
T Consensus       170 ~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~  223 (272)
T cd06629         170 MQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFK  223 (272)
T ss_pred             ccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHH
Confidence            35778899999976532 367789999999999999999999976655544433

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.90  E-value=8.9e-09  Score=56.70  Aligned_cols=47  Identities=38%  Similarity=0.802  Sum_probs=38.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ..++..|++||++.+...++...|+|++|++++++++|..||.+.+.
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~  209 (291)
T cd07870         163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD  209 (291)
T ss_pred             ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh
Confidence            34678899999986543367789999999999999999999976553

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.90  E-value=4.1e-09  Score=57.69  Aligned_cols=44  Identities=27%  Similarity=0.379  Sum_probs=36.3

Q ss_pred             ccccccccCchhhhcc---ccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGA---RMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~---~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..|+..|++||.+.+.   ..++.+.|+|++|++++++++|..||..
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (283)
T cd06617         163 DAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS  209 (283)
T ss_pred             ccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence            4578889999987642   2267789999999999999999999964

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.90  E-value=1.5e-08  Score=55.28  Aligned_cols=57  Identities=26%  Similarity=0.292  Sum_probs=42.4

Q ss_pred             CccccccccCchhhhcc------ccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGA------RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~------~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+++..|++||++...      ..++.+.|+|++|++++++++ +..||....+.+.+..+..
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~  223 (268)
T cd05086         160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIK  223 (268)
T ss_pred             CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            34577889999987431      114567899999999999986 5778887777776666544

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.90  E-value=1.1e-08  Score=56.39  Aligned_cols=53  Identities=19%  Similarity=0.272  Sum_probs=41.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH--cCCCCCCCChHHHHHHHH
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~--~~~~~~~~~~~~~~~~i~   59 (85)
                      .++..|++||.+.... ++..+|+|++|++++++++  +..||...+....+..+.
T Consensus       193 ~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~  247 (296)
T cd05051         193 PLPIRWMAWESVLLGK-FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAG  247 (296)
T ss_pred             CCCceecCHHHhhcCC-CCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHH
Confidence            3456799999987765 7888999999999999987  667887666655555443

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.90  E-value=5.5e-09  Score=57.48  Aligned_cols=47  Identities=23%  Similarity=0.377  Sum_probs=37.6

Q ss_pred             CccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...|+..|++||.+... ..++...|+|++|++++++++|..||....
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~  212 (290)
T cd05613         165 SFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG  212 (290)
T ss_pred             cccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC
Confidence            34578899999998642 225678999999999999999999986543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.88  E-value=1.7e-08  Score=55.79  Aligned_cols=51  Identities=22%  Similarity=0.312  Sum_probs=40.2

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH--cCCCCCCCChHHHHHHH
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI   58 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~--~~~~~~~~~~~~~~~~i   58 (85)
                      ++..|+|||++.... ++.+.|+|++|++++++++  +..||...+.......+
T Consensus       193 ~~~~y~aPE~~~~~~-~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~  245 (295)
T cd05097         193 LPIRWMAWESILLGK-FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENT  245 (295)
T ss_pred             CceeecChhhhccCC-cCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHH
Confidence            356799999987766 8889999999999999987  56788776665554443

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.88  E-value=1.3e-08  Score=57.05  Aligned_cols=49  Identities=27%  Similarity=0.342  Sum_probs=39.0

Q ss_pred             ccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHH
Q psy13989          7 VRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL   55 (85)
Q Consensus         7 gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~   55 (85)
                      ++..|++||++.+. ..++...|+|++|++++++++|..||.+.......
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~  219 (328)
T cd08226         170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML  219 (328)
T ss_pred             CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH
Confidence            34569999998653 23678899999999999999999999877654443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.88  E-value=1.9e-08  Score=55.63  Aligned_cols=49  Identities=22%  Similarity=0.354  Sum_probs=39.1

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH--cCCCCCCCChHHHHH
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLT   56 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~--~~~~~~~~~~~~~~~   56 (85)
                      ++..|++||+..... ++.+.|+||+|+++|++++  +..||...+..+...
T Consensus       194 ~~~~~~~pe~~~~~~-~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~  244 (296)
T cd05095         194 LPIRWMSWESILLGK-FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE  244 (296)
T ss_pred             CccccCCHHHHhcCC-ccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence            346789999877766 8889999999999999997  678887766555443

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.87  E-value=1.3e-08  Score=55.81  Aligned_cols=50  Identities=20%  Similarity=0.298  Sum_probs=39.6

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHH-HcCCCCCCCChHHHH
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQL   55 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~-~~~~~~~~~~~~~~~   55 (85)
                      .++..|++||.+.+...++.+.|+|++|+++++++ .|..||.+..+.+..
T Consensus       181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~  231 (274)
T cd05076         181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE  231 (274)
T ss_pred             ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH
Confidence            46778999999876444788999999999999985 688899876655443

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.86  E-value=1.2e-08  Score=55.50  Aligned_cols=46  Identities=30%  Similarity=0.544  Sum_probs=37.2

Q ss_pred             ccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..|+..|++||++... ..++.+.|+|++|++++++++|..||....
T Consensus       169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~  215 (268)
T cd06624         169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELG  215 (268)
T ss_pred             CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcccc
Confidence            3467889999997543 236788999999999999999999996543

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0603|consensus

Probab=98.86  E-value=3.2e-09  Score=63.21  Aligned_cols=65  Identities=26%  Similarity=0.321  Sum_probs=48.8

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      |||..|||||++.  + +...+|.|++|++.+++++|..||.+    ++..+|...     ....|...+..+.+++
T Consensus       154 cgt~eymApEI~~--g-h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~-----~~~~p~~l~~~a~~~~  218 (612)
T KOG0603|consen  154 CGTYEYRAPEIIN--G-HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA-----ELEMPRELSAEARSLF  218 (612)
T ss_pred             ccchhhhhhHhhh--c-cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh-----ccCCchhhhHHHHHHH
Confidence            8999999999997  3 66778999999999999999999987    556666542     2234444555555544

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.86  E-value=2.1e-08  Score=54.33  Aligned_cols=46  Identities=26%  Similarity=0.515  Sum_probs=37.7

Q ss_pred             ccccccccCchhhhccc--cCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGAR--MYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~--~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..++..|++||++....  ....+.|+|++|++++++++|..||.+..
T Consensus       163 ~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~  210 (264)
T cd06626         163 LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD  210 (264)
T ss_pred             CcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc
Confidence            45677899999986532  26678999999999999999999997664

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.85  E-value=1e-08  Score=58.24  Aligned_cols=43  Identities=23%  Similarity=0.396  Sum_probs=35.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcC-CCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PFLP   47 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~-~~~~   47 (85)
                      ...||..|+|||++.+.. ++.++|+|++|+++|+++++. .+|.
T Consensus       215 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~  258 (357)
T PHA03209        215 GLAGTVETNAPEVLARDK-YNSKADIWSAGIVLFEMLAYPSTIFE  258 (357)
T ss_pred             cccccccccCCeecCCCC-CCchhhHHHHHHHHHHHHHcCCcccc
Confidence            356899999999988776 889999999999999999744 4443

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.84  E-value=2e-08  Score=54.87  Aligned_cols=53  Identities=23%  Similarity=0.413  Sum_probs=41.4

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHH
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~   59 (85)
                      .++..|++||.+.+.. .....|+|++|++++++++ |..||.+.........+.
T Consensus       179 ~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~  232 (275)
T cd05046         179 LIPLRWLAPEAVQEDD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ  232 (275)
T ss_pred             eeEEeecChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH
Confidence            4456699999887665 6788999999999999998 788897766655555543

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.84  E-value=2.2e-08  Score=55.33  Aligned_cols=53  Identities=26%  Similarity=0.380  Sum_probs=39.4

Q ss_pred             cccccccCchhhhcc---ccCCchhHHHhHHHHHHHHHHcCCCCCCCCh-HHHHHHH
Q psy13989          6 KVRKAFMAPELLFGA---RMYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRI   58 (85)
Q Consensus         6 ~gt~~~~ape~~~~~---~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~-~~~~~~i   58 (85)
                      .++..|++||.+.+.   ..++.+.|+|++|++++++++|..||..... .+.+..+
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  231 (296)
T cd06618         175 AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKI  231 (296)
T ss_pred             CCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHH
Confidence            366789999998643   2266789999999999999999999976432 3344443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.84  E-value=2e-08  Score=55.82  Aligned_cols=49  Identities=20%  Similarity=0.299  Sum_probs=39.2

Q ss_pred             ccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHH
Q psy13989          5 KKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLD   53 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~   53 (85)
                      ..++..|++||++... ..++.+.|+|++|++++++++|..||.......
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~  217 (314)
T cd08216         168 SVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ  217 (314)
T ss_pred             ccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            3466789999998653 237788999999999999999999998765443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.83  E-value=1.4e-08  Score=56.91  Aligned_cols=48  Identities=21%  Similarity=0.300  Sum_probs=38.8

Q ss_pred             cccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHH
Q psy13989          6 KVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLD   53 (85)
Q Consensus         6 ~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~   53 (85)
                      .++..|+|||++.+. ..++.++|+|++|++++++++|..||.......
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  217 (327)
T cd08227         169 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ  217 (327)
T ss_pred             cceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH
Confidence            456679999998753 237889999999999999999999997655433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG4257|consensus

Probab=98.82  E-value=1.4e-09  Score=65.52  Aligned_cols=64  Identities=23%  Similarity=0.353  Sum_probs=56.5

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ...||+||.+.... +....|+|-+|+.+||.+. |-.||.|-...+.+-+|..+.+.|.|+.+|.
T Consensus       555 PIKWmaPESINfRr-FTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp  619 (974)
T KOG4257|consen  555 PIKWMAPESINFRR-FTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPP  619 (974)
T ss_pred             ceeecCccccchhc-ccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCCh
Confidence            34699999998777 8899999999999999986 8899999998899888888988888888774

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.82  E-value=1.2e-08  Score=60.44  Aligned_cols=41  Identities=27%  Similarity=0.331  Sum_probs=35.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPF   45 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~   45 (85)
                      ..+||..|++||++.+.. ++...|+|++|+++++++++..+
T Consensus       327 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~~~~~  367 (501)
T PHA03210        327 GWVGTVATNSPEILAGDG-YCEITDIWSCGLILLDMLSHDFC  367 (501)
T ss_pred             cccCCcCCCCchhhcCCC-CCcHHHHHHHHHHHHHHHHCCCC
Confidence            457999999999998776 88999999999999999987643

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.81  E-value=1.8e-08  Score=55.43  Aligned_cols=45  Identities=27%  Similarity=0.404  Sum_probs=36.7

Q ss_pred             ccccccccCchhhhccc-cCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~-~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..|+..|++||.+.+.. ..+...|+|++|++++++++|..||...
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~  211 (288)
T cd05583         166 FCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVD  211 (288)
T ss_pred             ccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccC
Confidence            45788899999976532 2567889999999999999999999644

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.80  E-value=6.6e-08  Score=51.45  Aligned_cols=54  Identities=37%  Similarity=0.726  Sum_probs=42.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC-CChHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG-ESDLDQLTRI   58 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~-~~~~~~~~~i   58 (85)
                      ...++..|++||...... ++.+.|+|++|++++++++|..||.. .........+
T Consensus       145 ~~~~~~~~~~pE~~~~~~-~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~  199 (244)
T smart00220      145 TFVGTPEYMAPEVLLGKG-YGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKI  199 (244)
T ss_pred             cccCCcCCCCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            355778899999987655 77799999999999999999999977 4444444333

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.79  E-value=4.3e-08  Score=57.63  Aligned_cols=42  Identities=29%  Similarity=0.431  Sum_probs=36.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFL   46 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~   46 (85)
                      ..+||..|++||++.+.. ++.+.|+|++|+++|+++.+..++
T Consensus       321 ~~~GT~~Y~APE~~~~~~-~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        321 GIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             ccCCCcCCcCHHHHcCCC-CCchHHHHHHHHHHHHHHHcCCCc
Confidence            356899999999998776 889999999999999998876544

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.79  E-value=3.7e-08  Score=55.67  Aligned_cols=44  Identities=30%  Similarity=0.596  Sum_probs=36.7

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCCh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESD   51 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~   51 (85)
                      ++..|++||++.+.. ++.+.|+|++|++++++++ |..||.+...
T Consensus       243 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~  287 (343)
T cd05103         243 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKI  287 (343)
T ss_pred             CCcceECcHHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCccc
Confidence            345699999987766 8889999999999999986 8889977543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.76  E-value=4.7e-08  Score=53.67  Aligned_cols=41  Identities=22%  Similarity=0.340  Sum_probs=34.7

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ++..|++||...... ++.+.|+|++|++++++++|..|+..
T Consensus       172 ~~~~~~~PE~~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~  212 (283)
T cd05080         172 SPVFWYAVECLKENK-FSYASDVWSFGVTLYELLTHCDSKQS  212 (283)
T ss_pred             CCceeeCHhHhcccC-CCcccccHHHHHHHHHHHhCCCCCCC
Confidence            455689999887665 78889999999999999999888754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.76  E-value=2.9e-08  Score=53.39  Aligned_cols=43  Identities=26%  Similarity=0.385  Sum_probs=35.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..++..|++||...... ++...|+|++|++++++++|..++..
T Consensus       142 ~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~~~~~  184 (237)
T cd05576         142 EAVENMYCAPEVGGISE-ETEACDWWSLGAILFELLTGKTLVEC  184 (237)
T ss_pred             CCcCccccCCcccCCCC-CCchhhHHHHHHHHHHHHHCcchhhc
Confidence            34566799999886665 77889999999999999999877643

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.75  E-value=8.2e-09  Score=64.77  Aligned_cols=43  Identities=23%  Similarity=0.238  Sum_probs=37.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..||+.|+|||++.+.. ++.+.|+|++|+++||+++|..||..
T Consensus       838 ~~~t~~y~aPE~~~~~~-~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        838 CFISSAYVAPETRETKD-ITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             ccccccccCcccccCCC-CCcccchhhHHHHHHHHHhCCCCCCc
Confidence            35778999999987766 88899999999999999999999843

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.71  E-value=1e-07  Score=51.54  Aligned_cols=47  Identities=21%  Similarity=0.331  Sum_probs=37.1

Q ss_pred             ccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHH-cCCCCCCCCh
Q psy13989          5 KKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLL-KAPFLPGESD   51 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~   51 (85)
                      ..++..|++||++... ..++.+.|+|++|++++++++ +..|+...+.
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~  212 (259)
T cd05037         164 RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS  212 (259)
T ss_pred             cccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence            3466789999998765 237888999999999999988 5777766543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.66  E-value=1e-07  Score=50.37  Aligned_cols=57  Identities=28%  Similarity=0.409  Sum_probs=42.8

Q ss_pred             CccccccccCchhhh-ccccCCchhHHHhHHHHHHHHHHcCCCCCC-CChH-HHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLF-GARMYGVGIDMWAVGCIICELLLKAPFLPG-ESDL-DQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~-~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~-~~~~-~~~~~i~~~   61 (85)
                      ...++..|++||... ... ++...|+|++|++++++++|..||.+ .++. .+.+.+..+
T Consensus       158 ~~~~~~~~~~pe~~~~~~~-~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~  217 (225)
T smart00221      158 TVKGTPFYLAPEVLLGGKG-YGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG  217 (225)
T ss_pred             ceeccCCcCCHhHhcCCCC-CCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence            345777899999873 333 67789999999999999999999977 4444 455555443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1025|consensus

Probab=98.66  E-value=4.5e-08  Score=60.74  Aligned_cols=62  Identities=19%  Similarity=0.172  Sum_probs=51.4

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      +.|+|-|.++... |.+..|+|++|+..||+++ |..|+.+....++-..+..+.+.+.|+..+
T Consensus       864 ikwmale~i~~~~-~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCt  926 (1177)
T KOG1025|consen  864 IKWMALESIRIRK-YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICT  926 (1177)
T ss_pred             cHHHHHHHhhccC-CCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCcc
Confidence            4577888887777 9999999999999999988 999999999888877777777766666543

>KOG2345|consensus

Probab=98.56  E-value=5.8e-08  Score=52.90  Aligned_cols=41  Identities=20%  Similarity=0.447  Sum_probs=33.9

Q ss_pred             ccccccCchhhhcc--ccCCchhHHHhHHHHHHHHHHcCCCCC
Q psy13989          7 VRKAFMAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLP   47 (85)
Q Consensus         7 gt~~~~ape~~~~~--~~~~~~~~~ws~g~~~~~~~~~~~~~~   47 (85)
                      .|..|+|||.+...  ...+.++|+||+||.+|++..|..||.
T Consensus       200 Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe  242 (302)
T KOG2345|consen  200 CTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE  242 (302)
T ss_pred             CCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence            36789999987532  237788999999999999999999994

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.55  E-value=3.4e-07  Score=50.35  Aligned_cols=40  Identities=25%  Similarity=0.450  Sum_probs=32.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPF   45 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~   45 (85)
                      ..++..|+|||++.+.. ++.+.|+|++|+++++++++..+
T Consensus       172 ~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~ellt~~~~  211 (284)
T cd05079         172 LDSPVFWYAPECLIQSK-FYIASDVWSFGVTLYELLTYCDS  211 (284)
T ss_pred             CCCCccccCHHHhccCC-CCccccchhhhhhhhhhhcCCCC
Confidence            34556799999987665 77889999999999999986544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0668|consensus

Probab=98.52  E-value=3.3e-07  Score=49.82  Aligned_cols=58  Identities=36%  Similarity=0.867  Sum_probs=46.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcC-CCCCCCChHHHHHHHHhhcC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~   63 (85)
                      +.+.+|-.||.+.....|+.+.|+||+||++..++..+ +.|.|.+..+++.+|.+.++
T Consensus       193 VASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLG  251 (338)
T KOG0668|consen  193 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLG  251 (338)
T ss_pred             eehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhC
Confidence            45667888999877666999999999999999998754 56688888888877766544

>KOG0195|consensus

Probab=98.52  E-value=4e-07  Score=50.67  Aligned_cols=67  Identities=19%  Similarity=0.194  Sum_probs=50.9

Q ss_pred             cccccCchhhhcccc--CCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHH-HhhcCCCCCCCcchhc
Q psy13989          8 RKAFMAPELLFGARM--YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI-FQTLGTPSEDTWPTAG   74 (85)
Q Consensus         8 t~~~~ape~~~~~~~--~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~p~~~   74 (85)
                      .|.|++||.+...+.  --..+|+||+.+++||+.+...||...+++++--+| ..+++...++-+...+
T Consensus       349 ~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm  418 (448)
T KOG0195|consen  349 SPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHM  418 (448)
T ss_pred             CcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHH
Confidence            578999999876542  124679999999999999999999999998887666 3566655555544433

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.48  E-value=1.3e-06  Score=47.96  Aligned_cols=37  Identities=27%  Similarity=0.521  Sum_probs=31.0

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCC
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFL   46 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~   46 (85)
                      ..|++||++.+.. ++.+.|+|++|+++++++++..++
T Consensus       175 ~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~~  211 (284)
T cd05081         175 IFWYAPESLTESK-FSVASDVWSFGVVLYELFTYSDKS  211 (284)
T ss_pred             eEeeCHHHhccCC-cChHHHHHHHHHHHHHHhhcCCcC
Confidence            4589999987766 888999999999999999876544

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.47  E-value=3.1e-07  Score=50.27  Aligned_cols=41  Identities=22%  Similarity=0.381  Sum_probs=34.1

Q ss_pred             cccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          8 RKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         8 t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      +..|++||...... ++...|+|++|++++++++|..|+...
T Consensus       175 ~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~  215 (284)
T cd05038         175 PIFWYAPECLRTSK-FSSASDVWSFGVTLYELFTYGDPSQSP  215 (284)
T ss_pred             cccccCcHHHccCC-CCcccchHHHhhhhheeeccCCCcccc
Confidence            34589999887665 778899999999999999998887553

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1035|consensus

Probab=98.47  E-value=4.7e-07  Score=58.00  Aligned_cols=39  Identities=31%  Similarity=0.544  Sum_probs=34.4

Q ss_pred             CCccccccccCchhhhccc--cCCchhHHHhHHHHHHHHHH
Q psy13989          3 NWKKVRKAFMAPELLFGAR--MYGVGIDMWAVGCIICELLL   41 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~--~~~~~~~~ws~g~~~~~~~~   41 (85)
                      |+.+||-.|+|||++.+..  .|+.++|++|+|++++||+.
T Consensus       773 Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y  813 (1351)
T KOG1035|consen  773 TSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY  813 (1351)
T ss_pred             ccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc
Confidence            6789999999999986543  59999999999999999974

>KOG1033|consensus

Probab=98.23  E-value=3.2e-06  Score=50.06  Aligned_cols=38  Identities=32%  Similarity=0.606  Sum_probs=34.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL   41 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~   41 (85)
                      +.-+||.+||+||.+.+.. |+.++|++++|+++++++.
T Consensus       420 t~~~gt~~YmsPEQi~g~~-y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  420 TQQVGTLLYMSPEQIRGQQ-YSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhcccccccCCHHHHhhhh-hhhhcchhhHHHHHHHHHH
Confidence            3457999999999999887 9999999999999999987

>KOG1167|consensus

Probab=98.21  E-value=4.9e-07  Score=52.07  Aligned_cols=56  Identities=30%  Similarity=0.467  Sum_probs=42.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC-CCChHHHHHHH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP-GESDLDQLTRI   58 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~-~~~~~~~~~~i   58 (85)
                      -...||+.|.|||++...+.-+.++|+|+.|+++..++++..||. ..++...+..|
T Consensus       235 anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei  291 (418)
T KOG1167|consen  235 ANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEI  291 (418)
T ss_pred             cccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHH
Confidence            356799999999999876656778999999999999998877764 33444444333

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.20  E-value=5.6e-06  Score=50.11  Aligned_cols=43  Identities=14%  Similarity=0.153  Sum_probs=31.1

Q ss_pred             CCccccccccCchhhhccc---------------------cCCchhHHHhHHHHHHHHHHcCCC
Q psy13989          3 NWKKVRKAFMAPELLFGAR---------------------MYGVGIDMWAVGCIICELLLKAPF   45 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~---------------------~~~~~~~~ws~g~~~~~~~~~~~~   45 (85)
                      +.+++++.|+|||.+....                     .++.+.|+||+||++++++.+..+
T Consensus       315 ~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~  378 (566)
T PLN03225        315 KEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLR  378 (566)
T ss_pred             cccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCC
Confidence            3567899999999754221                     133456999999999999975443

>KOG2052|consensus

Probab=98.15  E-value=5.8e-06  Score=48.47  Aligned_cols=70  Identities=20%  Similarity=0.339  Sum_probs=45.2

Q ss_pred             CCCccccccccCchhhhccc---cCC--chhHHHhHHHHHHHHHHc----------CCCCCCCC----hHHHHHHH--Hh
Q psy13989          2 QNWKKVRKAFMAPELLFGAR---MYG--VGIDMWAVGCIICELLLK----------APFLPGES----DLDQLTRI--FQ   60 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~---~~~--~~~~~ws~g~~~~~~~~~----------~~~~~~~~----~~~~~~~i--~~   60 (85)
                      .+.-+||.-|||||++-...   .+.  ..+|+|++|+++||+...          ++||.+..    ..+.+.++  .+
T Consensus       377 ~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~  456 (513)
T KOG2052|consen  377 PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQ  456 (513)
T ss_pred             CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeec
Confidence            35678999999999985321   122  468999999999998752          46775543    34445444  24


Q ss_pred             hcCCCCCCCcc
Q psy13989         61 TLGTPSEDTWP   71 (85)
Q Consensus        61 ~~~~~~~~~~p   71 (85)
                      .+++..+..|.
T Consensus       457 ~~RP~ipnrW~  467 (513)
T KOG2052|consen  457 KLRPNIPNRWK  467 (513)
T ss_pred             ccCCCCCcccc
Confidence            45554444443

>KOG0606|consensus

Probab=98.13  E-value=3.4e-06  Score=53.78  Aligned_cols=77  Identities=25%  Similarity=0.366  Sum_probs=61.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ...||+.|.+||...+.. ....+|+|+.|+.+++.+.|.+||....+......|...  ..+-+.-+...+.++.+++.
T Consensus       994 ~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~--~~~~p~g~~~~s~~aq~~~~ 1070 (1205)
T KOG0606|consen  994 AVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNR--DIPWPEGPEEGSYEAQDLIN 1070 (1205)
T ss_pred             cccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccC--CCCCCCCccccChhhhhhhh
Confidence            457899999999999887 777889999999999999999999988888777666443  45555566777777776654

>KOG1094|consensus

Probab=98.07  E-value=1.1e-05  Score=49.06  Aligned_cols=53  Identities=17%  Similarity=0.304  Sum_probs=41.3

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH--cCCCCCCCChHHHHHHHHh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~--~~~~~~~~~~~~~~~~i~~   60 (85)
                      -..-|||+|.+.-++ +..+.|+|++|+.+||++.  ...||....+........+
T Consensus       701 lpiRwmawEsillgk-FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~  755 (807)
T KOG1094|consen  701 LPIRWMAWESILLGK-FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGE  755 (807)
T ss_pred             eeeeehhHHHHHhcc-ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhh
Confidence            345689999998887 9999999999999999875  6679977766555444433

>KOG1187|consensus

Probab=98.07  E-value=2.6e-06  Score=48.97  Aligned_cols=42  Identities=17%  Similarity=0.265  Sum_probs=36.9

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      .||..|++||+..... .+.+.|++|+|+++.|+++|+.+...
T Consensus       239 ~gt~gY~~PEy~~~g~-lt~KsDVySFGVvllElitgr~~~d~  280 (361)
T KOG1187|consen  239 MGTFGYLAPEYASTGK-LTEKSDVYSFGVVLLELITGRKAVDQ  280 (361)
T ss_pred             CCCCccCChhhhccCC-cCcccccccchHHHHHHHhCCcccCC
Confidence            7899999999987755 78899999999999999999876653

>KOG1152|consensus

Probab=98.04  E-value=7.9e-07  Score=53.61  Aligned_cols=44  Identities=25%  Similarity=0.396  Sum_probs=38.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP   47 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~   47 (85)
                      .|+||.-|.|||++.+.++.+...|+|++|+++|..+...-||+
T Consensus       727 ~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  727 VFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             eeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            57899999999999988867778899999999998877666665

>KOG3653|consensus

Probab=98.02  E-value=7.5e-06  Score=48.32  Aligned_cols=40  Identities=30%  Similarity=0.491  Sum_probs=32.1

Q ss_pred             ccccccccCchhhhccccCC-----chhHHHhHHHHHHHHHHcCC
Q psy13989          5 KKVRKAFMAPELLFGARMYG-----VGIDMWAVGCIICELLLKAP   44 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~-----~~~~~ws~g~~~~~~~~~~~   44 (85)
                      -+||.-|||||++-+..++.     ...|++++|.++||+++...
T Consensus       378 qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~  422 (534)
T KOG3653|consen  378 QVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCT  422 (534)
T ss_pred             hhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            57999999999987643333     46799999999999998543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.68  E-value=0.00057  Score=37.54  Aligned_cols=49  Identities=31%  Similarity=0.550  Sum_probs=40.9

Q ss_pred             CCccccccccCchhhhcc--ccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          3 NWKKVRKAFMAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~--~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ...+|+..|++||.+...  .......|+|++|+.+++++.+..||.....
T Consensus       166 ~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~  216 (384)
T COG0515         166 STSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN  216 (384)
T ss_pred             cccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            466899999999998773  3378889999999999999999988877653

>KOG1027|consensus

Probab=97.66  E-value=5.5e-06  Score=51.60  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=36.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLP   47 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~   47 (85)
                      +...||..|+|||++.... -...+|+.++||++|..++ |..||-
T Consensus       672 s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFG  716 (903)
T KOG1027|consen  672 SGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFG  716 (903)
T ss_pred             cCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCC
Confidence            4567999999999998766 4568999999999998887 577883

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.66  E-value=0.00021  Score=43.09  Aligned_cols=42  Identities=12%  Similarity=0.192  Sum_probs=29.9

Q ss_pred             ccccccCchhhhcccc---------------------CCchhHHHhHHHHHHHHHHcCC-CCCC
Q psy13989          7 VRKAFMAPELLFGARM---------------------YGVGIDMWAVGCIICELLLKAP-FLPG   48 (85)
Q Consensus         7 gt~~~~ape~~~~~~~---------------------~~~~~~~ws~g~~~~~~~~~~~-~~~~   48 (85)
                      +++.|++||.+.....                     .....|+|++|+++++++.+.. ++.+
T Consensus       372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~  435 (507)
T PLN03224        372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN  435 (507)
T ss_pred             CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence            4788999998753210                     1123699999999999998764 6644

>KOG0590|consensus

Probab=97.61  E-value=6.3e-06  Score=50.22  Aligned_cols=48  Identities=21%  Similarity=0.288  Sum_probs=40.1

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ...++|+..|.|||++.+.......+|+|+.|+++..|..++.||.-.
T Consensus       481 ~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a  528 (601)
T KOG0590|consen  481 SSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVA  528 (601)
T ss_pred             hcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccc
Confidence            356789999999999988775567789999999999999998888543

>KOG4158|consensus

Probab=97.20  E-value=0.00086  Score=39.74  Aligned_cols=77  Identities=21%  Similarity=0.314  Sum_probs=48.5

Q ss_pred             ccccccCchhhhccc------cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcC-CCCCCCcchhchhhhh
Q psy13989          7 VRKAFMAPELLFGAR------MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG-TPSEDTWPTAGVKGLF   79 (85)
Q Consensus         7 gt~~~~ape~~~~~~------~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~p~~~~~~~~   79 (85)
                      |.-..||||+....+      .| .++|.|+.|.+.||++...-||++.-.+..-.+-.+... ++-+..+|-...+..+
T Consensus       413 GNa~lmAPEi~ta~PGp~avvny-~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~  491 (598)
T KOG4158|consen  413 GNAKLMAPEIATAVPGPNAVVNY-EKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVF  491 (598)
T ss_pred             CcceecchhhhhcCCCCceeecc-chhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHH
Confidence            334568999875322      13 468999999999999988889987433222111122212 2334456777777788


Q ss_pred             hhhhc
Q psy13989         80 SLIRA   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +++++
T Consensus       492 ~lL~r  496 (598)
T KOG4158|consen  492 DLLKR  496 (598)
T ss_pred             HHhcC
Confidence            87765

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.20  E-value=0.00024  Score=39.94  Aligned_cols=72  Identities=19%  Similarity=0.126  Sum_probs=41.8

Q ss_pred             cccccCchhhhcc-------ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          8 RKAFMAPELLFGA-------RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         8 t~~~~ape~~~~~-------~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      +..|.+||.....       ..++...|.|.+|+++|.+..+..||....+......    ....+. ..|+.....+..
T Consensus       205 ~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~----~f~~C~-~~Pe~v~~LI~~  279 (288)
T PF14531_consen  205 PVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW----DFSRCR-DMPEPVQFLIRG  279 (288)
T ss_dssp             -TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG----GGTTSS----HHHHHHHHH
T ss_pred             CcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc----cchhcC-CcCHHHHHHHHH
Confidence            3457888875432       2267888999999999999999999965543211110    112333 667777777777


Q ss_pred             hhhc
Q psy13989         81 LIRA   84 (85)
Q Consensus        81 ~~~~   84 (85)
                      ||++
T Consensus       280 lL~~  283 (288)
T PF14531_consen  280 LLQR  283 (288)
T ss_dssp             HT-S
T ss_pred             HccC
Confidence            7764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=96.29  E-value=0.016  Score=29.92  Aligned_cols=35  Identities=40%  Similarity=0.748  Sum_probs=28.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICEL   39 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~   39 (85)
                      ..+...|++||........+...|+|++|++++++
T Consensus       153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            34667789999887652377889999999999988

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0590|consensus

Probab=95.92  E-value=0.0014  Score=40.50  Aligned_cols=45  Identities=22%  Similarity=0.327  Sum_probs=37.4

Q ss_pred             Cccc-cccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          4 WKKV-RKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         4 ~~~g-t~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..+| ++.|+|||...+........|+|+.|+++..+..|..|+.-
T Consensus       187 ~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~  232 (601)
T KOG0590|consen  187 DRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDF  232 (601)
T ss_pred             cccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccc
Confidence            4567 99999999988765567788999999999999988877743

>KOG1345|consensus

Probab=95.85  E-value=0.00076  Score=38.05  Aligned_cols=41  Identities=22%  Similarity=0.242  Sum_probs=31.0

Q ss_pred             ccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          9 KAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         9 ~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..|.+||.+.-    .-..+...|+|.+|++++.+++|..|++..
T Consensus       184 ~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka  228 (378)
T KOG1345|consen  184 NNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA  228 (378)
T ss_pred             cccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh
Confidence            45778887532    112556789999999999999999999743

>KOG1164|consensus

Probab=95.45  E-value=0.044  Score=31.35  Aligned_cols=47  Identities=13%  Similarity=0.029  Sum_probs=38.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      .+.||.-|.++.+-.+.. .+...|+|+++.++.++..|..|+.+...
T Consensus       196 ~~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~  242 (322)
T KOG1164|consen  196 LFRGTLRYASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEM  242 (322)
T ss_pred             CCCCccccccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence            356888998888765555 77888999999999999999999977653

>KOG1023|consensus

Probab=94.61  E-value=0.094  Score=32.01  Aligned_cols=51  Identities=25%  Similarity=0.352  Sum_probs=36.6

Q ss_pred             cccCchhhhccc--c----CCchhHHHhHHHHHHHHHHcCCCCCCC----ChHHHHHHHHh
Q psy13989         10 AFMAPELLFGAR--M----YGVGIDMWAVGCIICELLLKAPFLPGE----SDLDQLTRIFQ   60 (85)
Q Consensus        10 ~~~ape~~~~~~--~----~~~~~~~ws~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~   60 (85)
                      .|++||.+....  .    .....|++++|+++++++....||...    .+.+...++..
T Consensus       116 lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~  176 (484)
T KOG1023|consen  116 LWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK  176 (484)
T ss_pred             hccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence            579999987631  1    345689999999999999988888653    23345555544

>KOG1240|consensus

Probab=93.61  E-value=0.1  Score=35.15  Aligned_cols=37  Identities=32%  Similarity=0.777  Sum_probs=28.4

Q ss_pred             cccCchhhhccc----------cCCchhHHHhHHHHHHHHHH-cCCCC
Q psy13989         10 AFMAPELLFGAR----------MYGVGIDMWAVGCIICELLL-KAPFL   46 (85)
Q Consensus        10 ~~~ape~~~~~~----------~~~~~~~~ws~g~~~~~~~~-~~~~~   46 (85)
                      .|.|||.+....          .....-|+.+.||++.|++. |.++|
T Consensus       192 CYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF  239 (1431)
T KOG1240|consen  192 CYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLF  239 (1431)
T ss_pred             eecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcc
Confidence            589999875411          13456799999999999986 78888

>KOG1165|consensus

Probab=93.49  E-value=0.091  Score=30.94  Aligned_cols=60  Identities=15%  Similarity=0.100  Sum_probs=44.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC---hHHHHHHHHhhcC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES---DLDQLTRIFQTLG   63 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~   63 (85)
                      .+..||.-||+.-.=++.. -+..-|+=++|=+++..+.|..||.|..   ..+-+++|....+
T Consensus       194 KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr  256 (449)
T KOG1165|consen  194 KSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR  256 (449)
T ss_pred             cccccceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence            3567888898877655654 5667789999999999999999999874   4555666654433

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=88.60  E-value=0.75  Score=28.41  Aligned_cols=44  Identities=23%  Similarity=0.257  Sum_probs=32.7

Q ss_pred             ccccccccCchhhh-----ccccCCchhHHHhHHHHHHHHHHc-CCCCCCC
Q psy13989          5 KKVRKAFMAPELLF-----GARMYGVGIDMWAVGCIICELLLK-APFLPGE   49 (85)
Q Consensus         5 ~~gt~~~~ape~~~-----~~~~~~~~~~~ws~g~~~~~~~~~-~~~~~~~   49 (85)
                      -+|.+.|+.||.-.     +-. .....|.+.+++++++++.| ..||.|.
T Consensus       176 pVg~~eftPPElQ~~~sf~g~~-r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         176 PVGVSEFTPPELQTLPSFVGFE-RTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             ccCccccCCHHHhccccccccC-CCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            35778899999743     111 34566899999999999875 8888775

>KOG0576|consensus

Probab=85.08  E-value=0.18  Score=32.22  Aligned_cols=45  Identities=11%  Similarity=-0.038  Sum_probs=35.9

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP   47 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~   47 (85)
                      .+++.+++.+++||+..... +..+.+.|+.+....++..+.+|-.
T Consensus       387 ~~t~~~~~~~~~pev~~~~~-~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  387 PRTAIGTPEPLAPEVIQENT-IDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             cccCCCCCCCCCchhhcccc-cccCCCccCCCcchhhcCCCCCCCC
Confidence            46788999999999998887 8889999999977666666655443

>KOG2137|consensus

Probab=82.29  E-value=0.071  Score=33.74  Aligned_cols=40  Identities=23%  Similarity=0.474  Sum_probs=30.0

Q ss_pred             ccccCchhhhccccCCchhHHHhHHHHHHHHH-HcCCCCCCC
Q psy13989          9 KAFMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGE   49 (85)
Q Consensus         9 ~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~-~~~~~~~~~   49 (85)
                      ..|.|||++.... -+...|+.++|++.+... .|...+.+.
T Consensus       173 ~~f~apE~~~~~~-~~~~sd~fSlG~li~~i~~~gk~i~~a~  213 (700)
T KOG2137|consen  173 LNFLAPEYLLGTT-NTPASDVFSLGVLIYTIYNGGKSIIAAN  213 (700)
T ss_pred             cccccchhhcccc-ccccccceeeeeEEEEEecCCcchhhcc
Confidence            4689999988754 667889999999888776 455555444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	85
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-26
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-16
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-16
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-16
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		7e-16
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		7e-16
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		7e-16
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		7e-16
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-16
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		7e-16
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-16
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-16
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		7e-16
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		7e-16
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-16
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		7e-16
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-16
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-16
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-16
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		7e-16
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-16
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-16
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		8e-16
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		8e-16
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		8e-16
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-16
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-16
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-16
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		9e-16
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-16
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		9e-16
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-16
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		9e-16
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-15
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-15
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-15
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-15
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-15
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-15
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		6e-15
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		6e-15
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-14
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-14
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-14
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		7e-14
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		7e-14
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		7e-14
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		7e-14
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		7e-14
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		7e-14
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		7e-14
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		7e-14
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		7e-14
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		7e-14
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		7e-14
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		7e-14
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		7e-14
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		7e-14
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		7e-14
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		7e-14
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		7e-14
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		7e-14
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		7e-14
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		7e-14
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		7e-14
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		7e-14
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-14
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-13
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		6e-13
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		9e-13
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		9e-13
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-12
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-11
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-11
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-11
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-11
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-11
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-11
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-11
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-11
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-11
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		3e-11
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-11
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-11
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		3e-11
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-11
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-11
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-11
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-11
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-11
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-11
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-11
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		3e-11
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-11
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-11
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-11
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-11
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-11
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-11
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		6e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		1e-10
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-10
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		3e-10
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		3e-10
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		3e-10
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		4e-10
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-10
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		7e-10
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		7e-10
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-09
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		2e-09
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		2e-09
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		2e-09
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		2e-09
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-09
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		2e-09
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		2e-09
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		2e-09
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		2e-09
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		2e-09
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		2e-09
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		2e-09
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		2e-09
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		2e-09
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		2e-09
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		2e-09
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-09
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		3e-09
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		3e-09
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		3e-09
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		5e-09
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		7e-09
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-08
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-08
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-08
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-08
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-08
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-08
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-08
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-08
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-08
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-08
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-08
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-08
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-08
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-08
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-08
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-08
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-08
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-08
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-08
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-08
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-08
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-08
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-08
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-08
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-08
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-08
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-08
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-08
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-08
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-08
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-08
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-08
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-08
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-08
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-08
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-08
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-08
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-08
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-08
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-08
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-08
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-08
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-08
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-08
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-08
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-08
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-08
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-08
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-08
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-08
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-08
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-08
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-08
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-08
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-08
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-08
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-08
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-08
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		3e-08
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		3e-08
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		3e-08
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		5e-08
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-08
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		5e-08
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-08
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-08
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		6e-08
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-08
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-07
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-07
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-07
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-07
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-07
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-07
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-07
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-07
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-07
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		3e-07
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		3e-07
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		3e-07
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		3e-07
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-07
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		3e-07
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-07
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-07
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-07
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		3e-07
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		3e-07
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		3e-07
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		3e-07
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		3e-07
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		3e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		4e-07
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		4e-07
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		4e-07
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		4e-07
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		4e-07
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		4e-07
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		4e-07
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		4e-07
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		4e-07
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		4e-07
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		4e-07
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		4e-07
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		7e-07
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-07
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-06
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-06
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		3e-06
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		8e-06
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		8e-06
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		9e-06

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  114 bits (286), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 59/65 (90%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233
Query: 67  EDTWP 71
           E+ WP
Sbjct: 234 EEQWP 238

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  PE+L G+R Y   +D+W++ CI  E+L+K P  PG+S++DQL +IF+ LG P + TW
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262
Query: 71  PTAGVKGL 78
           P  GV  L
Sbjct: 263 P--GVTAL 268

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 71  P 71
           P
Sbjct: 228 P 228

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 71  P 71
           P
Sbjct: 230 P 230

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
Query: 71  P 71
           P
Sbjct: 233 P 233

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 71  P 71
           P
Sbjct: 228 P 228

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 71  P 71
           P
Sbjct: 230 P 230

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 71  P 71
           P
Sbjct: 228 P 228

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 71  P 71
           P
Sbjct: 228 P 228

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 71  P 71
           P
Sbjct: 228 P 228

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 71  P 71
           P
Sbjct: 228 P 228

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 71  P 71
           P
Sbjct: 230 P 230

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 71  P 71
           P
Sbjct: 230 P 230

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 71  P 71
           P
Sbjct: 231 P 231

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 71  P 71
           P
Sbjct: 232 P 232

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 71  P 71
           P
Sbjct: 229 P 229

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 71  P 71
           P
Sbjct: 231 P 231

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 71  P 71
           P
Sbjct: 232 P 232

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 71  P 71
           P
Sbjct: 231 P 231

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 71  P 71
           P
Sbjct: 232 P 232

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 71  P 71
           P
Sbjct: 231 P 231

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 71  P 71
           P
Sbjct: 232 P 232

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 71  P 71
           P
Sbjct: 230 P 230

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
Query: 71  P 71
           P
Sbjct: 233 P 233

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 71  P 71
           P
Sbjct: 232 P 232

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
Query: 71  P 71
           P
Sbjct: 236 P 236

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 71  P 71
           P
Sbjct: 232 P 232

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  W
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
Query: 71  P 71
           P
Sbjct: 236 P 236

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + AP++L G++ Y   ID+W+VGCI  E++  AP  PG S+ DQL RIF+ LGTP+   W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 71  P 71
           P
Sbjct: 226 P 226

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PFLPGESDLDQLTRIFQTLGTPSEDT 69
           +  P++LFGA++Y   IDMW+ GCI  EL   A P  PG    DQL RIF+ LGTP+E+ 
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 70  WPT 72
           WP+
Sbjct: 227 WPS 229

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + AP++L G++ Y   ID+W+VGCI  E++   P  PG S+ DQL RIF+ LGTP+   W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 71  P 71
           P
Sbjct: 226 P 226

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + AP++L G++ Y   ID+W+VGCI  E++   P  PG S+ DQL RIF+ LGTP+   W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 71  P 71
           P
Sbjct: 226 P 226

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PFLPGESDLDQLTRIFQTLGTPSEDT 69
           +  P++LFGA++Y   IDMW+ GCI  EL     P  PG    DQL RIF+ LGTP+E+ 
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 70  WPT 72
           WP+
Sbjct: 227 WPS 229

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + AP++L G+R Y   ID+W+ GCI+ E++   P  PG +D +QL  IF  +GTP+E  W
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 71  PT 72
           P+
Sbjct: 234 PS 235

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ EL+   P  PGES +DQL  I + LGTPS +
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE 264
Query: 69  TWPT 72
              T
Sbjct: 265 QIKT 268

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 250

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 273

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 283

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 281

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 264

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 324

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 253

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 249

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 246

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 258

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + AP++L G++ Y   +D+W++GCI  E++   P  PG +D DQL +IF  LGTP+   W
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 71  P 71
           P
Sbjct: 245 P 245

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + AP++L G++ Y   +D+W++GCI  E++   P  PG +D DQL +IF  LGTP+   W
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 71  P 71
           P
Sbjct: 245 P 245

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APEL+ GA  Y   ID+W++GC+  EL+L  P   GE+ +DQL RI Q +GTP+++
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKE 264

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  P++L G+  Y   IDMW VGCI  E+    P  PG +  +QL  IF+ LGTP+E+TW
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
Query: 71  P 71
           P
Sbjct: 226 P 226

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 67
           + APE++ GAR YG+ IDMW++GCI+ ELL   P LPGE + DQL  + + LG PS+
Sbjct: 265 YRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 67
           + APE++ GAR YG+ IDMW++GCI+ ELL   P LPGE + DQL  + + LG PS+
Sbjct: 265 YRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 67
           + APE++ GAR YG+ IDMW++GCI+ ELL   P LPGE + DQL  + + LG P +
Sbjct: 265 YRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ 320

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED W
Sbjct: 177 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 71  P 71
           P
Sbjct: 236 P 236

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 63
           + APELL G   YG  +D+WA+GC++ E+ +  P  PG+SD+DQL  I   LG
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG 242

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED W
Sbjct: 177 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 71  P 71
           P
Sbjct: 236 P 236

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED W
Sbjct: 177 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 71  P 71
           P
Sbjct: 236 P 236

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED W
Sbjct: 185 YRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 243
Query: 71  P 71
           P
Sbjct: 244 P 244

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 71  P 71
           P
Sbjct: 244 P 244

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 71  P 71
           P
Sbjct: 244 P 244

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 71  P 71
           P
Sbjct: 244 P 244

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE+L G+  Y  GIDMW++GCI+ E+L   P  PG S ++QL RI   +  PS +
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNE 253

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 63
           + +PELL G   YG  +D+WA+GC+  ELL   P  PG+SD+DQL  I +TLG
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 258

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 256

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 247

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 248

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAP-FLPGESDL--------DQLTRIFQT 61
           + APELL GAR Y   ID+WA+GCI  ELL   P F   + D+        DQL RIF  
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 260
Query: 62  LGTPSEDTW 70
           +G P++  W
Sbjct: 261 MGFPADKDW 269

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+P ++
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQE 248

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + + APEL+FG + Y   +D+W+VGCI  E++L  P   G++   QL  I + LG PS +
Sbjct: 195 RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE 254

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + W
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 71  P 71
           P
Sbjct: 255 P 255

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + W
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253
Query: 71  P 71
           P
Sbjct: 254 P 254

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + W
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 71  P 71
           P
Sbjct: 255 P 255

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +  PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + W
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 71  P 71
           P
Sbjct: 255 P 255

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI + +GTPS +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI + +GTPS +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI + +GTPS +
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 243

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 247
Query: 62  LGT 64
           LGT
Sbjct: 248 LGT 250

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 187 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 246
Query: 62  LGT 64
           LGT
Sbjct: 247 LGT 249

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 247
Query: 62  LGT 64
           LGT
Sbjct: 248 LGT 250

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 194 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 253
Query: 62  LGT 64
           LGT
Sbjct: 254 LGT 256

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 62  LGT 64
           LGT
Sbjct: 249 LGT 251

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  + PF  G+ + DQL RI + 
Sbjct: 190 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKV 249
Query: 62  LGT 64
           LGT
Sbjct: 250 LGT 252

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   +MY   +DMW++GC++  ++  + PF  G+ + DQL RI + 
Sbjct: 195 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKV 254
Query: 62  LGT 64
           LGT
Sbjct: 255 LGT 257

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  +  Y   +D+W+ GCI+ EL L+ P  PG     QL  IF  +GTP  D
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  +  Y   +D+W+ GCI+ EL L+ P  PG     QL  IF  +GTP  D
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  +  Y   +D+W+ GCI+ EL L+ P  PG     QL  IF  +GTP  D
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++  A  Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APEL+     Y   ID+W+VGCI  E+L +    PG++ + QL  I   LGTPS    
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 71  PTAGVKGLFSLIRA 84
              G + + + I++
Sbjct: 288 QAVGAERVRAYIQS 301

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APEL+     Y   ID+W+VGCI  E+L +    PG++ + QL  I   LGTPS    
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 71  PTAGVKGLFSLIRA 84
              G + + + I++
Sbjct: 289 QAVGAERVRAYIQS 302

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 242

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 250

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 268

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 242

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 255

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 256

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 265

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 243

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 244

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 268

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 256

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 247

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 251

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 264

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 264

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           + APE++     Y + +D+W+VGCI+ ELL      PG   ++QL +I +  GTP
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTP 271

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           + +PE+L G   Y + IDMW++GCI+ E+    P   G +++DQ+ +I + LG P
Sbjct: 224 YRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           + +PE+L G   Y + IDMW++GCI+ E+    P   G +++DQ+ +I + LG P
Sbjct: 205 YRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           + +PE+L G   Y + IDMW++GCI+ E+    P   G +++DQ+ +I + LG P
Sbjct: 224 YRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 67  ED 68
            +
Sbjct: 246 PE 247

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 67  ED 68
            +
Sbjct: 246 PE 247

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 67  ED 68
            +
Sbjct: 246 PE 247

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 67  ED 68
            +
Sbjct: 246 PE 247

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 67  ED 68
            +
Sbjct: 246 PE 247

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++     Y   +D+W+VGCI+ E+L       G+  LDQLT+I +  G P 
Sbjct: 185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 244
Query: 67  ED 68
            +
Sbjct: 245 TE 246

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++     Y   +D+W+VGCI+ E+L       G+  LDQLT+I +  G P 
Sbjct: 203 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 262
Query: 67  ED 68
            +
Sbjct: 263 TE 264

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 189 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 246

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VGCI+ EL+       G   +DQ  ++ + LGTPS
Sbjct: 187 VTRYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS 245
Query: 67  ED 68
            +
Sbjct: 246 AE 247

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 238

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 192 VTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 249

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 186 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 180 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 225 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 188 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 181 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 180 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 225 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           V + + APE++     Y   +D+W+VGCI+ E++       G   LDQL  I +  GTP
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VGCI+ EL+  +    G   +DQ  ++ + LGTPS
Sbjct: 185 VTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 243
Query: 67  ED 68
            +
Sbjct: 244 AE 245

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
Query: 62  LGT 64
           LGT
Sbjct: 243 LGT 245

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 184 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 243
Query: 62  LGT 64
           LGT
Sbjct: 244 LGT 246

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
Query: 62  LGT 64
           LGT
Sbjct: 243 LGT 245

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
Query: 62  LGT 64
           LGT
Sbjct: 243 LGT 245

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 185 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 244
Query: 62  LGT 64
           LGT
Sbjct: 245 LGT 247

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
Query: 62  LGT 64
           LGT
Sbjct: 243 LGT 245

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
Query: 62  LGT 64
           LGT
Sbjct: 243 LGT 245

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 204 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 263
Query: 62  LGT 64
           LGT
Sbjct: 264 LGT 266

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 184 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 243
Query: 62  LGT 64
           LGT
Sbjct: 244 LGT 246

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 61
           N +   + F  PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + 
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
Query: 62  LGT 64
           LGT
Sbjct: 243 LGT 245

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VG I+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 67  ED 68
            +
Sbjct: 246 PE 247

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V + + APE++ G   Y   +D+W+VG I+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 187 VTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 67  ED 68
            +
Sbjct: 246 PE 247

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 31/93 (33%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGES----- 50
           V + + APEL+     Y   ID+W++GCI  ELL            + P  PG S     
Sbjct: 245 VTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLS 304
Query: 51  ---------------DLDQLTRIFQTLGTPSED 68
                          + DQL  IF  LGTPSE+
Sbjct: 305 PDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE 337

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 28/90 (31%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELL-----------LKAPFLPG------- 48
           V + + APEL+     Y   ID+W+ GCI  ELL            + P  PG       
Sbjct: 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLS 272
Query: 49  ----------ESDLDQLTRIFQTLGTPSED 68
                     +S+ DQL  IF  +GTP+ED
Sbjct: 273 PDRNSKKVHEKSNRDQLNIIFNIIGTPTED 302

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           V K + +P LL     Y   IDMWA GCI  E+L       G  +L+Q+  I +++    
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245
Query: 67  ED 68
           E+
Sbjct: 246 EE 247

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           + APEL+   + +   +DMW+ GC++ E+  +     G +  +QL +I + +GTP
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           + APEL+   + +   +DMW+ GC++ E+  +     G +  +QL +I + +GTP
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 28/90 (31%)
Query: 7   VRKAFMAPELLFGARMYGVGIDMWAVGCIICELL--LKA---------PFLPG------- 48
           V + + APEL+     Y   ID+W+ GCI  ELL  +K+         P  PG       
Sbjct: 218 VTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLS 277
Query: 49  ----------ESDLDQLTRIFQTLGTPSED 68
                     +S+ DQL  IF  +GTP E+
Sbjct: 278 PDHNSKKVHEKSNRDQLNIIFNVIGTPPEE 307

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	85
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	6e-37
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-34
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-34
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-34
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-34
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-34
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-34
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-34
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-33
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-32
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-32
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	6e-32
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-31
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-29
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-29
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-29
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-27
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-27
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-25
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-23
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-23
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	8e-23
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-22
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-22
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-22
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-22
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-22
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-21
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-20
3rp9_A	458	Mitogen-activated protein kinase; structural genom	6e-19
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-17
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-16
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-16
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-14
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-14
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	5e-14
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	5e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	7e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-05
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	9e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-04
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-04
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	6e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-04

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  125 bits (316), Expect = 6e-37
 Identities = 50/66 (75%), Positives = 58/66 (87%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP 
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP- 238

Query: 73  AGVKGL 78
             +  L
Sbjct: 239 -DMCSL 243

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  117 bits (297), Expect = 1e-34
 Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           AP++L G++ Y   ID+W+VGCI  E++   P  PG S+ DQL RIF+ LGTP+   WP 
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP- 226

Query: 73  AGVKGL 78
             V  L
Sbjct: 227 -NVTEL 231

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  118 bits (298), Expect = 2e-34
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           AP++L G++ Y   +D+W++GCI  E++   P  PG +D DQL +IF  LGTP+   WP 
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWP- 245

Query: 73  AGVKGL 78
             V+ L
Sbjct: 246 -QVQEL 250

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  117 bits (296), Expect = 3e-34
 Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           +PELL G   YG  +D+WA+GC+  ELL   P  PG+SD+DQL  I +TLG         
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ- 228

Query: 73  AGVKGL 78
                 
Sbjct: 229 -VFSTN 233

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  117 bits (296), Expect = 4e-34
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           AP++L G+R Y   ID+W+ GCI+ E++   P  PG +D +QL  IF  +GTP+E  WP 
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP- 234

Query: 73  AGVKGL 78
             V  L
Sbjct: 235 -SVTKL 239

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  117 bits (296), Expect = 4e-34
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
            P++L G+  Y   IDMW VGCI  E+    P  PG +  +QL  IF+ LGTP+E+TWP 
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWP- 226

Query: 73  AGVKGL 78
            G+   
Sbjct: 227 -GILSN 231

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  116 bits (294), Expect = 8e-34
 Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
            PE+L G+R Y   +D+W++ CI  E+L+K P  PG+S++DQL +IF+ LG P + TWP 
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP- 263

Query: 73  AGVKGL 78
            GV  L
Sbjct: 264 -GVTAL 268

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  115 bits (291), Expect = 3e-33
 Identities = 25/59 (42%), Positives = 34/59 (57%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           APELL G   YG  +D+WA+GC++ E+ +  P  PG+SD+DQL  I   LG        
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQE 250

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  114 bits (287), Expect = 1e-32
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
            PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + WP 
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP- 254

Query: 73  AGVKGL 78
             V   
Sbjct: 255 -NVDNY 259

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  111 bits (281), Expect = 4e-32
 Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 3/67 (4%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
            P++LFGA++Y   IDMW+ GCI  EL     P  PG    DQL RIF+ LGTP+E+ WP
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

Query: 72  TAGVKGL 78
              +  L
Sbjct: 229 --SMTKL 233

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  111 bits (280), Expect = 6e-32
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED WP 
Sbjct: 187 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP- 244

Query: 73  AGVKGL 78
                L
Sbjct: 245 -RDVSL 249

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  110 bits (278), Expect = 2e-31
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ WP 
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP- 244

Query: 73  AGVKGL 78
                L
Sbjct: 245 -RDVAL 249

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  107 bits (268), Expect = 1e-29
 Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 11/75 (14%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLG 63
           APELL GAR Y   ID+WA+GCI  ELL   P      +          DQL RIF  +G
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262

Query: 64  TPSEDTWPTAGVKGL 78
            P++  W    +K +
Sbjct: 263 FPADKDWE--DIKKM 275

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  106 bits (267), Expect = 2e-29
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APEL+FGA  Y   ID+W+ GC++ EL+   P  PGES +DQL  I + LGTPS +   T
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  107 bits (268), Expect = 2e-29
 Identities = 29/60 (48%), Positives = 39/60 (65%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +    
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  100 bits (252), Expect = 2e-27
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APEL+FG + Y   +D+W+VGCI  E++L  P   G++   QL  I + LG PS +    
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 99.8 bits (249), Expect = 5e-27
 Identities = 27/60 (45%), Positives = 39/60 (65%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT 72
           APEL+ GA  Y   ID+W++GC+  EL+L  P   GE+ +DQL RI Q +GTP+++    
Sbjct: 209 APELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIR 268

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 94.3 bits (235), Expect = 3e-25
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT     
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255

Query: 70  WP 71
           + 
Sbjct: 256 YI 257

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 90.9 bits (226), Expect = 1e-23
 Identities = 26/57 (45%), Positives = 36/57 (63%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           APE+L G+  Y  GIDMW++GCI+ E+L   P  PG S ++QL RI   +  PS + 
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNED 254

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 88.5 bits (220), Expect = 5e-23
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           +P LL     Y   IDMWA GCI  E+L       G  +L+Q+  I +++    E+ 
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 88.5 bits (220), Expect = 8e-23
 Identities = 17/57 (29%), Positives = 32/57 (56%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           APEL+   + +   +DMW+ GC++ E+  +     G +  +QL +I + +GTP  + 
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 87.8 bits (218), Expect = 1e-22
 Identities = 22/57 (38%), Positives = 32/57 (56%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  + 
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 87.4 bits (217), Expect = 2e-22
 Identities = 20/57 (35%), Positives = 30/57 (52%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           APE++     Y   +D+W+VGCI+ E++       G   LDQL  I +  GTP  + 
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 87.3 bits (217), Expect = 2e-22
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++ 
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 87.0 bits (216), Expect = 2e-22
 Identities = 21/57 (36%), Positives = 32/57 (56%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           APE++     Y   +D+W+VGCI+ E+L       G+  LDQLT+I +  G P  + 
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 247

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 86.9 bits (216), Expect = 3e-22
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APE++  +  Y   +D+W+ GCI+ EL L+ P  PG     QL  IF  +GTP  D
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 83.7 bits (207), Expect = 6e-21
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP  + 
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 286

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 82.4 bits (204), Expect = 1e-20
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP  + 
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 249

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 78.3 bits (193), Expect = 6e-19
 Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 31/90 (34%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKA-----------PFLPGES----------- 50
           APEL+     Y   ID+W++GCI  ELL              P  PG S           
Sbjct: 251 APELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAG 310

Query: 51  ---------DLDQLTRIFQTLGTPSEDTWP 71
                    + DQL  IF  LGTPSE+   
Sbjct: 311 NDFKFHTRGNRDQLNVIFNILGTPSEEDIE 340

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 74.4 bits (183), Expect = 1e-17
 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 28/85 (32%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGESD---------- 51
           APEL+     Y   ID+W+ GCI  ELL            + P  PG S           
Sbjct: 219 APELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSK 278

Query: 52  -------LDQLTRIFQTLGTPSEDT 69
                   DQL  IF  +GTP+ED 
Sbjct: 279 KVHEKSNRDQLNIIFNIIGTPTEDD 303

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 72.1 bits (177), Expect = 1e-16
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APE++ GAR YG+ IDMW++GCI+ ELL   P LPGE + DQL  + + LG PS+ 
Sbjct: 267 APEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 71.3 bits (175), Expect = 2e-16
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           +PE+L G   Y + IDMW++GCI+ E+    P   G +++DQ+ +I + LG P   
Sbjct: 226 SPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAH 280

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 66.2 bits (162), Expect = 1e-14
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
            PE++     +    D+W++GCI+ E            + + L  + + LG     
Sbjct: 207 PPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSH 261

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 65.4 bits (160), Expect = 2e-14
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APE++     + V  DMW+ GC++ EL   +        ++ L  +   +    ++
Sbjct: 227 APEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKN 281

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 64.2 bits (157), Expect = 5e-14
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           APE++     +    D+W++GCI+ E  L     P     + L  + + LG   + 
Sbjct: 202 APEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH 256

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 57.0 bits (138), Expect = 2e-11
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------DLDQLTRIFQTLGTP 65
           +PE+L GA  +G G D+W+  C+I EL+        +       D D + +I + LG  
Sbjct: 203 SPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 260

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 46.2 bits (110), Expect = 1e-07
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 12  MAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           +A E+L G   Y   IDM+++G I  E++   PF  G   ++ L ++         D   
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDD 254

Query: 72  T 72
            
Sbjct: 255 N 255

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 44.5 bits (105), Expect = 5e-07
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLP-----GESDLDQLTRIFQTLG 63
            + + E+L G+  Y    D+W+  C+  EL      F P        D D +  I + LG
Sbjct: 258 QYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316

Query: 64  TPSEDTW 70
                  
Sbjct: 317 KVPRKLI 323

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 43.7 bits (103), Expect = 8e-07
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPS-- 66
           F APE+  G +  G   DMW+VG ++  +LL   +PF  GE+D + L  +       +  
Sbjct: 322 FAAPEVAEG-KPVGYYTDMWSVG-VLSYILLSGLSPFG-GENDDETLRNVKS--CDWNMD 376

Query: 67  EDTWPT 72
           +  +  
Sbjct: 377 DSAFSG 382

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
           +++PE+    + Y    D+WA+GC++ EL  LK  F
Sbjct: 191 YLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAF 225

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.5 bits (98), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPF 45
           +M+PE +     Y    D+W++GC++ EL  L  PF
Sbjct: 182 YMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPF 216

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 41.6 bits (98), Expect = 5e-06
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
           F APE++      G   DMWA+G ++  +LL   +PF  GE DL+ L  +
Sbjct: 216 FAAPEIVDR-EPVGFYTDMWAIG-VLGYVLLSGLSPFA-GEDDLETLQNV 262

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 41.1 bits (97), Expect = 7e-06
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 9/66 (13%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPS-- 66
           + APE+     +     DMW++G  +  +LL    PFL  E++   +  I       +  
Sbjct: 169 YYAPEVHQH-DVVSTATDMWSLG-TLVYVLLSGINPFL-AETNQQIIENIMN--AEYTFD 223

Query: 67  EDTWPT 72
           E+ +  
Sbjct: 224 EEAFKE 229

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 40.8 bits (95), Expect = 1e-05
 Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 12/70 (17%)

Query: 10  AFMAPELL----------FGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRI 58
            F  PEL               +     D WA+G +I  +     P    ++ L     I
Sbjct: 267 GFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI-TKDAALGGSEWI 325

Query: 59  FQTLGTPSED 68
           F++     + 
Sbjct: 326 FRSCKNIPQP 335

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 40.6 bits (95), Expect = 1e-05
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 12  MAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
           M+PE + G   Y   +D++++G I+ ELL    F      +  +T +
Sbjct: 243 MSPEQIHG-NNYSHKVDIFSLGLILFELL--YSFSTQMERVRIITDV 286

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 40.3 bits (94), Expect = 1e-05
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED 68
            F   E+L   + +   ID + V   +  +L      +  E    +   +F+    P  D
Sbjct: 250 GFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFR--RLPHLD 306

Query: 69  TW 70
            W
Sbjct: 307 MW 308

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 3/63 (4%)

Query: 11  FMAPELLFG-ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED 68
           +   E L      +   ++ W +G  I  +     PF      +    +    L  P  D
Sbjct: 257 YAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS-LRVPGTD 315

Query: 69  TWP 71
           +  
Sbjct: 316 SLA 318

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 12  MAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQL 55
           M+PE +     Y    D+W++GC++ E+  L++PF   + +L  L
Sbjct: 203 MSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL 246

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 11  FMAPELLFGA--RMYGVGIDMWAVGCIICELLL--KAPF 45
           ++APE+L           +D+++ GC+   ++     PF
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 40.0 bits (93), Expect = 2e-05
 Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 6/64 (9%)

Query: 10  AFMAPELLFGAR----MYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 64
              A  +L   +    +     D W +G  I  +     P    ++ L     IF++   
Sbjct: 277 ETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN-TDDAALGGSEWIFRSCKN 335

Query: 65  PSED 68
             + 
Sbjct: 336 IPQP 339

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 39.8 bits (93), Expect = 2e-05
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 11  FMAPELLFGA-RMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRI 58
           F+APE+L      YG   D W+ G ++  LL    PF PG +D D ++++
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF-PGVNDADTISQV 288

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 12  MAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
           M+PE + G   Y   +D++++G I+ ELL   PF      +  LT +
Sbjct: 197 MSPEQIHG-NSYSHKVDIFSLGLILFELL--YPFSTQMERVRTLTDV 240

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 39.9 bits (93), Expect = 2e-05
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF-LPGESDLDQLTR 57
           +MAPE+L     Y    D +++GC++ +LL   +PF      D  ++ R
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           ++APE+L   + Y    D+W++G I+  LL   P   G++D + L ++ +   T     W
Sbjct: 204 YIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW 261

Query: 71  PT 72
             
Sbjct: 262 KN 263

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 39.4 bits (92), Expect = 3e-05
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 11/79 (13%)

Query: 11  FMAPELLFGA----------RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF 59
           +M PE +                    D+W++GCI+  +   K PF    + + +L  I 
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281

Query: 60  QTLGTPSEDTWPTAGVKGL 78
                      P   ++ +
Sbjct: 282 DPNHEIEFPDIPEKDLQDV 300

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 39.3 bits (92), Expect = 3e-05
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
           F+APE++      G+  DMW++G +I  +LL   +PFL G++  + L  I
Sbjct: 184 FVAPEIVNY-EPLGLEADMWSIG-VITYILLSGASPFL-GDTKQETLANI 230

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 39.3 bits (92), Expect = 3e-05
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           ++APE+L G   Y    D+W+ G I+  LL   P   G ++ D L ++ +   T     W
Sbjct: 194 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251

Query: 71  PT 72
             
Sbjct: 252 KK 253

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
           F+APE++      G+  DMW++G +I  +LL   +PFL G++  + L  I
Sbjct: 184 FVAPEIVNY-EPLGLEADMWSIG-VITYILLSGASPFL-GDTKQETLANI 230

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPSED 68
           F+APE++      G+  DMW++G +I  +LL   +PFL G++  + L  +        ++
Sbjct: 183 FVAPEIVNY-EPLGLEADMWSIG-VITYILLSGASPFL-GDTKQETLANVSAVNYEFEDE 239

Query: 69  TWPT 72
            +  
Sbjct: 240 YFSN 243

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 11/79 (13%)

Query: 11  FMAPELLFG----------ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF 59
           +M PE +                    D+W++GCI+  +   K PF    + + +L  I 
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 234

Query: 60  QTLGTPSEDTWPTAGVKGL 78
                      P   ++ +
Sbjct: 235 DPNHEIEFPDIPEKDLQDV 253

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
           F+APE++          DMW+VG +I  +LL   +PFL G++D + L  I
Sbjct: 254 FLAPEVVNY-DFVSFPTDMWSVG-VIAYMLLSGLSPFL-GDNDAETLNNI 300

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 38.6 bits (90), Expect = 5e-05
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
           FMAPELL G   Y   +D +A+G  + E++  + PF     +  +   + Q
Sbjct: 355 FMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPF-RARGEKVENKELKQ 403

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 38.7 bits (90), Expect = 6e-05
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 11/58 (18%)

Query: 12  MAPELLFGARM-------YGVGIDMWAVGCIICELLL-KAPFLP---GESDLDQLTRI 58
           + P++   A +       YG  +D+W++G           PF P      + + + +I
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 38.6 bits (90), Expect = 6e-05
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 11/58 (18%)

Query: 12  MAPELLFGARM-------YGVGIDMWAVGCIICELLL-KAPFLP---GESDLDQLTRI 58
           + P++   A +       YG  +D+W++G           PF P      + + + +I
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 38.4 bits (90), Expect = 6e-05
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 11/59 (18%)

Query: 11  FMAPELLFGA----------RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI 58
           +M PE +                    D+W++GCI+  +   K PF    + + +L  I
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 38.5 bits (89), Expect = 7e-05
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 12  MAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 71
           +APELL   + Y V +D W+ G +  E +    F P   +   +    +     +E    
Sbjct: 190 LAPELLEQ-KKYTVTVDYWSFGTLAFECI--TGFRPFLPNWQPVQWHGKVREKSNEHIVV 246

Query: 72  TAGVKGLFSLIR 83
              + G      
Sbjct: 247 YDDLTGAVKFSS 258

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 38.2 bits (89), Expect = 7e-05
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
           +MAPE++   R Y    D WA+GC++ E++  ++PF        +   + +
Sbjct: 351 YMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPF-QQRKKKIKREEVER 399

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 38.0 bits (89), Expect = 7e-05
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 12  MAPELLFGARMYGVGIDMWAVGCIICELL--LKAPF 45
           M+PE +   + YG  +D++A+G I+ ELL      F
Sbjct: 188 MSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAF 222

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 38.2 bits (89), Expect = 8e-05
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 12  MAPELLFGA------RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
            APELL  +      R     ID++++GC+   +L K    P      + + I +
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG-KHPFGDKYSRESNIIR 252

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 38.1 bits (89), Expect = 9e-05
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           ++APE+L     Y    D+W+ G I+  LL    PF  G+++ D L R+           
Sbjct: 189 YIAPEVL--RGTYDEKCDVWSAGVILYILLSGTPPF-YGKNEYDILKRVETGKYAFDLPQ 245

Query: 70  WPT 72
           W T
Sbjct: 246 WRT 248

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 38.0 bits (89), Expect = 9e-05
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
           ++APE+L          DMW +G II  +LL   +PF+ GE + +    I
Sbjct: 199 YLAPEILNY-DPITTATDMWNIG-IIAYMLLTHTSPFV-GEDNQETYLNI 245

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 37.8 bits (88), Expect = 9e-05
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           ++APE+L     Y    D+W+ G I+  LL    PF  G++D D + ++ +       + 
Sbjct: 214 YIAPEVLKKK--YNEKCDVWSCGVIMYILLCGYPPF-GGQNDQDIIKKVEKGKYYFDFND 270

Query: 70  WPT 72
           W  
Sbjct: 271 WKN 273

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL 40
           ++APE+L   + Y   +D W++G I   LL
Sbjct: 173 YVAPEVLAQ-KPYSKAVDCWSIGVITYILL 201

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 5/50 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 58
           F+APE++      G+  DMW++G +I  +LL   +PFL GE+  + LT I
Sbjct: 177 FVAPEIVNY-EPLGLEADMWSIG-VITYILLSGASPFL-GETKQETLTNI 223

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIF 59
           FMAPE+      Y   +D++A G  + E+   + P+    S+     +I+
Sbjct: 196 FMAPEM--YEEKYDESVDVYAFGMCMLEMATSEYPY----SECQNAAQIY 239

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 6/29 (20%), Positives = 13/29 (44%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICEL 39
           F+A E+L     +    D++A+   +   
Sbjct: 196 FLANEVLQENYTHLPKADIFALALTVVCA 224

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 11  FMAPELLFGARMYGVG--IDMWAVGCIICELL-LKAPFLPGESDLDQLTRI 58
           + APEL        +    D+W++GC++  ++  + P+       D +   
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT----- 64
           ++APE+L G   Y    DMW++G I+  LL    PF    +       + + +       
Sbjct: 195 YVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFY-SNTGQAISPGMKRRIRLGQYGF 252

Query: 65  PSEDTWPT 72
           P+ + W  
Sbjct: 253 PNPE-WSE 259

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
            ++ PE++ G RM+   +D+W++G +  E L+ K PF
Sbjct: 172 DYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPF 207

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 4/37 (10%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL--LKAPF 45
           +MAPELL G+  YG   D++++G  I E+   ++ P 
Sbjct: 222 YMAPELLQGS--YGTAADVFSLGLTILEVACNMELPH 256

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
           F+APE+L   + Y    D+W++G ++  +L    PF  G  D  +   I  
Sbjct: 186 FVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILA 233

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 36.3 bits (84), Expect = 4e-04
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 10  AFMAPEL--LFGARMYGVGIDMWAVGCIICELL-LKAPF 45
            +  PE+  L+     G   D+WA+GCI+  L   + PF
Sbjct: 215 MYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL 40
           + APE+L G   YG  +DMW+VG I   LL
Sbjct: 216 YCAPEILRGCA-YGPEVDMWSVGIITYILL 244

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 2/37 (5%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
            ++APE+L   + +   +D+W++GCI+  LL+ K PF
Sbjct: 206 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 241

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 13  APELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
           +PE+      +G+  D+W++GC+   LL+ + PF
Sbjct: 180 SPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPF 212

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 2/37 (5%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPF 45
            ++APE+L   + +   +D+W++GCI+  LL+ K PF
Sbjct: 180 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 215

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 35.5 bits (82), Expect = 7e-04
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ 60
           ++APE+L G   Y    DMW++G I+  LL    PF      L     +  
Sbjct: 229 YVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKT 277

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 35.4 bits (82), Expect = 8e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCI 35
           FMAPE++     YG  +D+W  G I
Sbjct: 199 FMAPEVVKR-EPYGKPVDVWGCGVI 222

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	85
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.85
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.84
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.84
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.83
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.82
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.82
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.81
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.81
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.78
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.77
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.76
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.75
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.75
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.75
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.73
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.72
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.69
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.67
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.65
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.65
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.64
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.64
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.64
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.64
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.63
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.63
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.63
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.62
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.6
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.6
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.6
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.59
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.59
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.59
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.59
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.58
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.58
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.58
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.58
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.58
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.58
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.58
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.57
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.57
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.57
3niz_A	311	Rhodanese family protein; structural genomics, str	99.57
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.57
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.56
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.56
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.55
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.55
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.55
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.55
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.55
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.54
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.54
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.54
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.52
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.52
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.52
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.52
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.51
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.51
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.5
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.5
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.5
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.49
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.49
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.49
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.49
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.48
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.48
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.48
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.48
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.48
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.48
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.48
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.48
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.48
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.47
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.47
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.47
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.46
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.46
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.45
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.45
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.45
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.45
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.44
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.44
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.44
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.44
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.44
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.44
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.44
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.43
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.43
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.43
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.43
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.43
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.43
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.43
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.43
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.42
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.41
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.41
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.41
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.41
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.41
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.41
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.41
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.41
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.41
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.41
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.41
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.4
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.4
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.4
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.4
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.4
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.4
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.4
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.39
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.39
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.39
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.39
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.39
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.39
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.39
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.39
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.39
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.39
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.38
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.38
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.38
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.38
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.37
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.37
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.37
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.37
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.36
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.36
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.36
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.36
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.36
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.36
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.36
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.36
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.36
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.35
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.35
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.35
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.35
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.35
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.35
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.34
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.34
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.34
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.34
3bhy_A	283	Death-associated protein kinase 3; death associate	99.34
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.34
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.34
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.34
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.33
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.33
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.33
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.33
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.33
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.33
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.33
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.32
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.32
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.32
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.32
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.31
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.31
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.31
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.31
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.31
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.3
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.3
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.3
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.3
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.3
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.3
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.29
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.29
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.29
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.28
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.28
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.27
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.27
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.27
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.27
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.27
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.27
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.26
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.25
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.25
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.25
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.24
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.24
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.24
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.24
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.24
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.23
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.23
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.23
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.22
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.22
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.22
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.2
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.2
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.2
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.2
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.18
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.18
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.17
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.17
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.17
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.16
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.16
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.16
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.16
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.16
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.15
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.15
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.14
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.1
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.08
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.05
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.03
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.03
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.02
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.02
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.01
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.98
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.91
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.84
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.59
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.58
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.21
3uqc_A	286	Probable conserved transmembrane protein; structur	98.14
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	95.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	95.9

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.85  E-value=2e-21  Score=106.85  Aligned_cols=75  Identities=23%  Similarity=0.327  Sum_probs=63.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      +++|||+.|+|||++.+.. |+.++|+||+||++|++++|..||.+.+....+.+|....     ..+|+..++++.+||
T Consensus       192 ~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~dli  265 (311)
T 4aw0_A          192 NSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE-----YDFPEKFFPKARDLV  265 (311)
T ss_dssp             CCCCSCGGGCCHHHHHHSC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----CCCCTTCCHHHHHHH
T ss_pred             cCcccCcccCCHHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----CCCCcccCHHHHHHH
Confidence            5689999999999998877 9999999999999999999999999999999888887652     234455666667766


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       266 ~  266 (311)
T 4aw0_A          266 E  266 (311)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.84  E-value=9.4e-21  Score=105.42  Aligned_cols=79  Identities=22%  Similarity=0.308  Sum_probs=64.5

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      .+++|||+.|+|||++.+.. |+.++|+||+||++|++++|..||.+.+....+..|...  .++....+...++++.+|
T Consensus       227 ~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~dl  303 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN--LPPRLKNLHKVSPSLKGF  303 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--SCCCCSCGGGSCHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC--CCCCCCccccCCHHHHHH
Confidence            35789999999999998777 999999999999999999999999999998888887654  233333445566777777


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      |+
T Consensus       304 i~  305 (346)
T 4fih_A          304 LD  305 (346)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.84  E-value=8.3e-21  Score=104.18  Aligned_cols=76  Identities=21%  Similarity=0.239  Sum_probs=62.6

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      .++.+||+.|+|||++.+.. |+.++|+||+|+++|++++|..||.+.+..+.+.+|.....     .+|...++++.+|
T Consensus       183 ~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~l  256 (304)
T 3ubd_A          183 AYSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-----GMPQFLSPEAQSL  256 (304)
T ss_dssp             CCSCCCCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHH
T ss_pred             ccccccCcccCCHHHhccCC-CCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC-----CCCCcCCHHHHHH
Confidence            35789999999999998877 99999999999999999999999999999998888876422     2344556666666


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      |+
T Consensus       257 i~  258 (304)
T 3ubd_A          257 LR  258 (304)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.83  E-value=2.5e-20  Score=105.93  Aligned_cols=79  Identities=23%  Similarity=0.331  Sum_probs=64.1

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      .+++|||+.|||||++.+.. |+.++|+||+||++|++++|..||.+.+....+..|....  ++....+...+.++.+|
T Consensus       304 ~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--~~~~~~~~~~s~~~~dl  380 (423)
T 4fie_A          304 RKSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PPRLKNLHKVSPSLKGF  380 (423)
T ss_dssp             BCCCEECTTTCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--CCCCSCTTSSCHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC--CCCCcccccCCHHHHHH
Confidence            45789999999999998877 9999999999999999999999999999998888876542  33333344566677777


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      |+
T Consensus       381 i~  382 (423)
T 4fie_A          381 LD  382 (423)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.82  E-value=5.6e-20  Score=103.94  Aligned_cols=68  Identities=35%  Similarity=0.648  Sum_probs=60.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      ++++||+.|+|||++.+...++.++|+||+||+++++++|.+||.+.+..+++.+|....+.|+...+
T Consensus       220 ~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~  287 (398)
T 4b99_A          220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI  287 (398)
T ss_dssp             CSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred             ccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence            46899999999999988765799999999999999999999999999999999999888777765443

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.82  E-value=3.5e-20  Score=103.26  Aligned_cols=76  Identities=21%  Similarity=0.255  Sum_probs=61.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++.+||+.|+|||++.+.. |+.++|+||+||++|++++|..||.+.+....+.+|......+.+..    .+.++.+||
T Consensus       183 ~~~~GT~~YmAPE~l~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~----~s~~~~~li  257 (350)
T 4b9d_A          183 RACIGTPYYLSPEICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLH----YSYDLRSLV  257 (350)
T ss_dssp             HHHHSCCTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTT----SCHHHHHHH
T ss_pred             cccCCCccccCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCcc----CCHHHHHHH
Confidence            3568999999999998877 99999999999999999999999999999999888877644333333    444455554


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       258 ~  258 (350)
T 4b9d_A          258 S  258 (350)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.81  E-value=7.5e-20  Score=99.26  Aligned_cols=76  Identities=24%  Similarity=0.295  Sum_probs=56.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++.+||+.|+|||++.+...++.++|+||+|+++|++++|..||.+.+....+..+....     ..+|...++++.+||
T Consensus       169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~~li  243 (275)
T 3hyh_A          169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV-----YTLPKFLSPGAAGLI  243 (275)
T ss_dssp             ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----CCCCTTSCHHHHHHH
T ss_pred             CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCHHHHHHH
Confidence            467999999999999887745689999999999999999999999988888887776542     223445566666666


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       244 ~  244 (275)
T 3hyh_A          244 K  244 (275)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.81  E-value=1.8e-20  Score=103.97  Aligned_cols=78  Identities=17%  Similarity=0.253  Sum_probs=62.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++++||+.|+|||++.+.. |+.++|+||+||++|++++|..||.+.+....+.+|...  .++...+|...++++.++|
T Consensus       214 ~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~~li  290 (336)
T 4g3f_A          214 DYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE--PPPIREIPPSCAPLTAQAI  290 (336)
T ss_dssp             CCCCCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS--CCGGGGSCTTSCHHHHHHH
T ss_pred             CccccCccccCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC--CCCchhcCccCCHHHHHHH
Confidence            3468999999999998877 999999999999999999999999988877777777654  2333345556666776666


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       291 ~  291 (336)
T 4g3f_A          291 Q  291 (336)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.78  E-value=1.1e-18  Score=95.27  Aligned_cols=77  Identities=17%  Similarity=0.236  Sum_probs=56.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++.+||+.|+|||++.+ . |+.++|+||+|+++|++++|..||.+......+.+.+..  ...+..++...++++.+||
T Consensus       188 ~~~~GTp~YmAPE~~~~-~-y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~li  263 (290)
T 3fpq_A          188 KAVIGTPEFMAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS--GVKPASFDKVAIPEVKEII  263 (290)
T ss_dssp             EESCSSCCCCCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT--TCCCGGGGGCCCHHHHHHH
T ss_pred             CCcccCccccCHHHcCC-C-CCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc--CCCCCCCCccCCHHHHHHH
Confidence            46789999999998854 4 899999999999999999999999876654444333322  1223345555666677766


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       264 ~  264 (290)
T 3fpq_A          264 E  264 (290)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.77  E-value=2.2e-18  Score=94.79  Aligned_cols=77  Identities=19%  Similarity=0.295  Sum_probs=62.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      +..+||+.|+|||++.+.. |+.++|+||+|+++||+++ |..||.+.+..+....+..+...+.+..+|....+.+..
T Consensus       205 ~~~~gt~~ymAPE~l~~~~-~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~  282 (308)
T 4gt4_A          205 GNSLLPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIE  282 (308)
T ss_dssp             SSSCBCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             cccccCCcccCHHHHhCCC-CCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHH
Confidence            4568999999999998877 9999999999999999998 899999999988888887766666556665544444433

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.76  E-value=3e-18  Score=93.94  Aligned_cols=76  Identities=16%  Similarity=0.227  Sum_probs=61.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ..+||+.|+|||++.+.. |+.++|+||+|+++||+++ |..||.+.+..+.+..+..+...+.+..+|....+.+..
T Consensus       189 ~~~gt~~ymAPE~~~~~~-~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~  265 (299)
T 4asz_A          189 HTMLPIRWMPPESIMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLG  265 (299)
T ss_dssp             TEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             ceecChhhcCHHHHcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHH
Confidence            456899999999998877 9999999999999999998 899999999999988888776555555555444443333

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.75  E-value=6.2e-18  Score=93.71  Aligned_cols=73  Identities=15%  Similarity=0.234  Sum_probs=58.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~   76 (85)
                      +..+||+.|+|||++.+.. ++.++|+||+|+++||+++ |..||.+.+..+.+..+..+...+.+..+|....+
T Consensus       218 ~~~~gt~~ymAPE~~~~~~-~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~  291 (329)
T 4aoj_A          218 GRTMLPIRWMPPESILYRK-FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYA  291 (329)
T ss_dssp             --CCCCGGGCCHHHHTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHH
T ss_pred             CcccccccccChhhhcCCC-CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHH
Confidence            3567999999999998877 9999999999999999998 89999999998888888776555544444443333

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.75  E-value=6.7e-18  Score=92.85  Aligned_cols=81  Identities=16%  Similarity=0.210  Sum_probs=59.3

Q ss_pred             CCccccccccCchhhhcc--ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH-hhcCCCCCCCcchhchhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF-QTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~--~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ++.+||+.|+|||++.+.  ..|+.++|+||+|+++|++++|..||.+.+....+..+. .....|.....+...+.++.
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~  271 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK  271 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHH
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHH
Confidence            456899999999998742  238899999999999999999999999877665555544 44444544555555666666


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      +++.
T Consensus       272 ~li~  275 (307)
T 3omv_A          272 RLVA  275 (307)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.75  E-value=4.1e-18  Score=99.92  Aligned_cols=79  Identities=24%  Similarity=0.245  Sum_probs=64.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      +.|||+.|+|||++.+.. |+..+|+||+||++|+|++|..||.+.+....+..|......++... ....++++.+||+
T Consensus       315 ~~~GT~~y~APEv~~~~~-y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~dli~  392 (573)
T 3uto_A          315 VTTGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA-FSGISEDGKDFIR  392 (573)
T ss_dssp             EECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGG-GTTSCHHHHHHHH
T ss_pred             eeEECccccCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCccc-ccCCCHHHHHHHH
Confidence            568999999999998877 99999999999999999999999999999999888876544433332 3445667777765


Q ss_pred             c
Q psy13989         84 A   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus       393 ~  393 (573)
T 3uto_A          393 K  393 (573)
T ss_dssp             T
T ss_pred             H
Confidence            3

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.73  E-value=1.2e-17  Score=99.21  Aligned_cols=77  Identities=19%  Similarity=0.258  Sum_probs=56.0

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh---HHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---LDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      ..++|||+.|+|||++.....|+..+|+||+||++|+|++|..||.+.+.   ..+...+...     ...+|...+.++
T Consensus       347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~-----~~~~p~~~S~~a  421 (689)
T 3v5w_A          347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-----AVELPDSFSPEL  421 (689)
T ss_dssp             CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC-----CCCCCTTSCHHH
T ss_pred             CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC-----CCCCCccCCHHH
Confidence            35789999999999997543499999999999999999999999976532   2333333332     223455566666


Q ss_pred             hhhhh
Q psy13989         79 FSLIR   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      .+||+
T Consensus       422 ~dLI~  426 (689)
T 3v5w_A          422 RSLLE  426 (689)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66665

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.72  E-value=2.5e-18  Score=96.27  Aligned_cols=59  Identities=29%  Similarity=0.372  Sum_probs=48.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC-CCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP-GESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~-~~~~~~~~~~i~~~   61 (85)
                      ++.+||+.|+|||++.+...|+..+|+||+||+++++++|..||. +.+..+++.+|...
T Consensus       204 ~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~  263 (361)
T 4f9c_A          204 APRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTI  263 (361)
T ss_dssp             --CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH
T ss_pred             cccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHh
Confidence            356899999999999876658999999999999999999998885 45566777666553

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.69  E-value=6.8e-17  Score=90.29  Aligned_cols=75  Identities=20%  Similarity=0.373  Sum_probs=55.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHH-HHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQ-LTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ++.+||+.|+|||++.+.. |+.++|+||+|+++||+++ |..||.+.+.... ...+..+.+.+.+..+    ++++.+
T Consensus       245 ~~~~gt~~ymAPE~l~~~~-y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~----~~~~~~  319 (353)
T 4ase_A          245 GDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT----TPEMYQ  319 (353)
T ss_dssp             TTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTC----CHHHHH
T ss_pred             ccccccccccCHHHHhcCC-CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccC----CHHHHH
Confidence            3567999999999998877 9999999999999999997 8999998764444 4444445444433333    444444


Q ss_pred             hh
Q psy13989         81 LI   82 (85)
Q Consensus        81 ~~   82 (85)
                      ++
T Consensus       320 li  321 (353)
T 4ase_A          320 TM  321 (353)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.67  E-value=9.7e-17  Score=90.16  Aligned_cols=65  Identities=40%  Similarity=0.797  Sum_probs=56.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED   68 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   68 (85)
                      ..+||+.|+|||++.+...++.++|+||+|++++++++|.+||.+.+....+.+|...++.|...
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~  253 (388)
T 3oz6_A          189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNE  253 (388)
T ss_dssp             -CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             CCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            46899999999999875458999999999999999999999999999999999998877766543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.65  E-value=7.4e-16  Score=86.03  Aligned_cols=75  Identities=21%  Similarity=0.398  Sum_probs=59.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+++||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+.+....+..|.....     .+|...+.++.++|
T Consensus       179 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li  252 (353)
T 2i0e_A          179 KTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-----AYPKSMSKEAVAIC  252 (353)
T ss_dssp             CCCCSCGGGCCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHH
T ss_pred             ccccCCccccChhhhcCCC-cCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC-----CCCCCCCHHHHHHH
Confidence            4678999999999998776 89999999999999999999999999998888888766422     23334445555554


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       253 ~  253 (353)
T 2i0e_A          253 K  253 (353)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.65  E-value=3.9e-16  Score=89.25  Aligned_cols=81  Identities=22%  Similarity=0.274  Sum_probs=59.3

Q ss_pred             CCccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          3 NWKKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      +..+||+.|+|||++..    ...++.++|+|++|+++|++++|..||.+.+..+.+..|.........+......+.++
T Consensus       234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~  313 (437)
T 4aw2_A          234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENA  313 (437)
T ss_dssp             CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHH
T ss_pred             ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHH
Confidence            34689999999999872    22388999999999999999999999999999888888865322122222223345566


Q ss_pred             hhhhh
Q psy13989         79 FSLIR   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      .+||+
T Consensus       314 ~dLi~  318 (437)
T 4aw2_A          314 KDLIR  318 (437)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.64  E-value=3.7e-16  Score=87.22  Aligned_cols=58  Identities=26%  Similarity=0.444  Sum_probs=49.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      .+.+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+.+....+..|...
T Consensus       182 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~  239 (353)
T 3txo_A          182 ATFCGTPDYIAPEILQEML-YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND  239 (353)
T ss_dssp             ----CCGGGCCHHHHHHHH-CTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             cccCCCcCeEChhhcCCCC-cCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            4678999999999998776 889999999999999999999999999998888888765

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.64  E-value=6.7e-16  Score=91.99  Aligned_cols=75  Identities=21%  Similarity=0.399  Sum_probs=60.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+++||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+.+..+.+..|....     ..+|...+.++.++|
T Consensus       500 ~~~~GT~~Y~APE~l~~~~-~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~~li  573 (674)
T 3pfq_A          500 KTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-----VAYPKSMSKEAVAIC  573 (674)
T ss_dssp             CCCCSCSSSCCHHHHTCCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC-----CCCCTTSCHHHHHHH
T ss_pred             ccccCCCcccCHhhhcCCC-CCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC-----CCCCccCCHHHHHHH
Confidence            4678999999999998777 8999999999999999999999999999988888887642     223444555555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       574 ~  574 (674)
T 3pfq_A          574 K  574 (674)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.64  E-value=1e-15  Score=85.29  Aligned_cols=75  Identities=23%  Similarity=0.396  Sum_probs=59.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.+||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+.+....+..+....     ..+|...+.++.++|
T Consensus       176 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~~li  249 (345)
T 1xjd_A          176 NTFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-----PFYPRWLEKEAKDLL  249 (345)
T ss_dssp             CCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----CCCCTTSCHHHHHHH
T ss_pred             cCCCCCcccCChhhhcCCC-CCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC-----CCCCcccCHHHHHHH
Confidence            4678999999999998876 8999999999999999999999999999888887776542     223444555555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       250 ~  250 (345)
T 1xjd_A          250 V  250 (345)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.64  E-value=4.5e-16  Score=89.45  Aligned_cols=65  Identities=32%  Similarity=0.729  Sum_probs=55.4

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED   68 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   68 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+..+.+.+|...++.|++.
T Consensus       221 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~  285 (464)
T 3ttj_A          221 TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE  285 (464)
T ss_dssp             ----CCCTTCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             CCCcccccccCHHHHcCCC-CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            4578999999999998876 8899999999999999999999999999999999998877766543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.63  E-value=1.7e-15  Score=84.17  Aligned_cols=75  Identities=19%  Similarity=0.275  Sum_probs=58.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.+||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+.+.......+....     ..+|...+.++.++|
T Consensus       163 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~~li  236 (337)
T 1o6l_A          163 KTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE-----IRFPRTLSPEAKSLL  236 (337)
T ss_dssp             CCCEECGGGCCGGGGSSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----CCCCTTSCHHHHHHH
T ss_pred             cccccChhhCChhhhcCCC-CCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCHHHHHHH
Confidence            4578999999999998776 8899999999999999999999999988887777776532     223344455555554


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       237 ~  237 (337)
T 1o6l_A          237 A  237 (337)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.63  E-value=7.6e-16  Score=87.49  Aligned_cols=80  Identities=18%  Similarity=0.232  Sum_probs=58.0

Q ss_pred             CccccccccCchhhhc------cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhh
Q psy13989          4 WKKVRKAFMAPELLFG------ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~------~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~   77 (85)
                      ..+||+.|+|||++..      ...++.++|+|++|+++|++++|..||.+.+....+..|.........+..+...+.+
T Consensus       222 ~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~  301 (412)
T 2vd5_A          222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEE  301 (412)
T ss_dssp             SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHH
T ss_pred             eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHH
Confidence            4689999999999873      2238899999999999999999999999999888888876532111122223445566


Q ss_pred             hhhhhh
Q psy13989         78 LFSLIR   83 (85)
Q Consensus        78 ~~~~~~   83 (85)
                      +.++|+
T Consensus       302 ~~dli~  307 (412)
T 2vd5_A          302 ARDFIQ  307 (412)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666664

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.63  E-value=1.6e-15  Score=85.20  Aligned_cols=58  Identities=21%  Similarity=0.420  Sum_probs=52.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      .+++||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+.+....+..|...
T Consensus       197 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~  254 (373)
T 2r5t_A          197 STFCGTPEYLAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK  254 (373)
T ss_dssp             CSBSCCCCCCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS
T ss_pred             ccccCCccccCHHHhCCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc
Confidence            4678999999999998876 899999999999999999999999999988888887654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.62  E-value=2.6e-15  Score=82.81  Aligned_cols=58  Identities=21%  Similarity=0.362  Sum_probs=51.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      .+.+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+...
T Consensus       161 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  218 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA  218 (318)
T ss_dssp             CCCCSCTTTCCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC
T ss_pred             ccccCCccccCHhHhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            3578999999999998776 889999999999999999999999999888888777664

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.60  E-value=4e-15  Score=82.97  Aligned_cols=75  Identities=21%  Similarity=0.338  Sum_probs=58.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.+||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+.+....+..+.....     .+|...+..+.++|
T Consensus       196 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~li  269 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLKDLL  269 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTCCHHHHHHH
T ss_pred             ccccCCccccCHHHhcCCC-CCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCHHHHHHH
Confidence            3578999999999998876 88999999999999999999999999998888888766422     22333444555544


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       270 ~  270 (350)
T 1rdq_E          270 R  270 (350)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.60  E-value=7.8e-15  Score=80.63  Aligned_cols=68  Identities=41%  Similarity=0.921  Sum_probs=56.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ..+||+.|+|||++.+...++.++|+|++|++++++++|..||.+.+....+..+....+.++...|+
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCG
T ss_pred             CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhh
Confidence            45789999999998765448899999999999999999999999999988888887766666554443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.60  E-value=2.8e-15  Score=85.19  Aligned_cols=64  Identities=45%  Similarity=0.884  Sum_probs=54.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ...+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.+..+.+..+.+.++.|.
T Consensus       214 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~  277 (420)
T 1j1b_A          214 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT  277 (420)
T ss_dssp             CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred             eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            3567899999999987754488999999999999999999999999998888888877655543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.59  E-value=8.2e-15  Score=80.75  Aligned_cols=70  Identities=41%  Similarity=0.830  Sum_probs=58.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      ..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.+....+..+....+.++...|+..
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  228 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI  228 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhh
Confidence            3568999999999877544889999999999999999999999999999999999888888888777754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.59  E-value=1.2e-14  Score=80.67  Aligned_cols=71  Identities=35%  Similarity=0.745  Sum_probs=60.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      +..+||+.|+|||++.+...++.++|+|++|++++++++|..||.+.+....+..+....+.+++..++..
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  256 (351)
T 3mi9_A          186 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV  256 (351)
T ss_dssp             CSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred             CCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccc
Confidence            34578999999999877555889999999999999999999999999998888888887777776666543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.59  E-value=1.1e-14  Score=83.44  Aligned_cols=78  Identities=23%  Similarity=0.308  Sum_probs=61.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+.+.......+.......+.+.|+ ..++++.++|+
T Consensus       172 ~~~gt~~Y~APE~l~~~~-~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~s~~~~~li~  249 (444)
T 3soa_A          172 GFAGTPGYLSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD-TVTPEAKDLIN  249 (444)
T ss_dssp             CSCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTT-TSCHHHHHHHH
T ss_pred             cccCCcccCCHHHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccc-cCCHHHHHHHH
Confidence            468999999999998776 8999999999999999999999999999988888887765554444433 23445555554

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.59  E-value=4.8e-15  Score=81.00  Aligned_cols=69  Identities=41%  Similarity=0.836  Sum_probs=60.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....+.++...|+.
T Consensus       177 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  245 (308)
T 3g33_A          177 TPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR  245 (308)
T ss_dssp             GGGGCCCSSCCHHHHHTSC-CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCS
T ss_pred             CCccccccccCchHHcCCC-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence            3467899999999998877 88999999999999999999999999999999999888877777766653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.58  E-value=3.8e-15  Score=84.04  Aligned_cols=64  Identities=45%  Similarity=0.880  Sum_probs=55.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      .+.+||+.|+|||++.+...++.++|+|++|++++++++|..||.+.+..+.+..+.+.++.|.
T Consensus       199 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~  262 (394)
T 4e7w_A          199 VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS  262 (394)
T ss_dssp             CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            3567899999999997765588999999999999999999999999999888888887766554

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.58  E-value=7.6e-15  Score=81.22  Aligned_cols=76  Identities=20%  Similarity=0.290  Sum_probs=58.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      +..+||+.|+|||++.+....+.++|+|++|++++++++|..||.+.+......++......     .|...+.++.+++
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~p~~~s~~~~~li  245 (328)
T 3fe3_A          171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-----IPFYMSTDCENLL  245 (328)
T ss_dssp             GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-----CCTTSCHHHHHHH
T ss_pred             ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----CCCCCCHHHHHHH
Confidence            45689999999999988763457899999999999999999999999988888777664322     2333455555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       246 ~  246 (328)
T 3fe3_A          246 K  246 (328)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.58  E-value=1.3e-14  Score=80.56  Aligned_cols=69  Identities=72%  Similarity=1.363  Sum_probs=58.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      +..+||+.|+|||++.+...++..+|+|++|++++++++|.+||.+.+....+..+....+.+....|+
T Consensus       170 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  238 (346)
T 1ua2_A          170 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP  238 (346)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred             CcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence            346789999999998765448889999999999999999999999999999988888877777666555

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.58  E-value=1.6e-14  Score=80.75  Aligned_cols=78  Identities=23%  Similarity=0.290  Sum_probs=60.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+.+.......+.......+.+.|+ ..+.++.++|+
T Consensus       189 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~li~  266 (362)
T 2bdw_A          189 GFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD-TVTPEAKSLID  266 (362)
T ss_dssp             CSCSCTTTCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGG-GSCHHHHHHHH
T ss_pred             cCCCCccccCHHHHccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCccccc-CCCHHHHHHHH
Confidence            468999999999998776 8899999999999999999999999999888888877664444444332 23445555553

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.58  E-value=1.3e-14  Score=80.04  Aligned_cols=68  Identities=41%  Similarity=1.002  Sum_probs=56.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ..+||+.|+|||++.+...++.++|+|++|++++++++|..||.+.+....+..+....+.++...++
T Consensus       196 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP  263 (329)
T ss_dssp             ----CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             CCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence            45679999999999875558899999999999999999999999999989888888877777666554

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.58  E-value=1.4e-14  Score=81.88  Aligned_cols=70  Identities=43%  Similarity=0.792  Sum_probs=56.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh---------HHHHHHHHhhcCCCCCCCcchh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      ..+||+.|+|||++.+...++.++|+|++|++++++++|..||.+...         ...+..+...++.|+...|+..
T Consensus       194 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~  272 (405)
T 3rgf_A          194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDI  272 (405)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGG
T ss_pred             CceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchh
Confidence            467899999999998755588999999999999999999999987654         4777888888888887776543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.58  E-value=6e-15  Score=82.60  Aligned_cols=79  Identities=24%  Similarity=0.294  Sum_probs=60.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...+||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+.+....+..+.......++. .....+.++.+||
T Consensus       176 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li  253 (361)
T 2yab_A          176 KNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE-FFSQTSELAKDFI  253 (361)
T ss_dssp             CCCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHH-HHTTSCHHHHHHH
T ss_pred             ccCCCCccEECchHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCch-hccCCCHHHHHHH
Confidence            4567999999999998776 8899999999999999999999999999888888876654333222 2234455566655


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       254 ~  254 (361)
T 2yab_A          254 R  254 (361)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.57  E-value=2.3e-14  Score=78.23  Aligned_cols=78  Identities=22%  Similarity=0.274  Sum_probs=60.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      +..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+....  .+....+...+..+.+++
T Consensus       174 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li  250 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFL  250 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC--SCCCSCGGGSCHHHHHHH
T ss_pred             CCccCCcCccChhhhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCccccCHHHHHHH
Confidence            3567999999999998877 8999999999999999999999999988877776665442  222334555566666665


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       251 ~  251 (297)
T 3fxz_A          251 N  251 (297)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.57  E-value=1.9e-14  Score=78.10  Aligned_cols=68  Identities=44%  Similarity=0.946  Sum_probs=54.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ..+||+.|+|||++.+...++.++|+|++|++++++++|..||.+.+....+..+....+.+....|+
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  226 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP  226 (288)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhch
Confidence            45789999999998765448899999999999999999999999999888888887766665554443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.57  E-value=1.4e-14  Score=79.48  Aligned_cols=69  Identities=39%  Similarity=0.914  Sum_probs=58.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ..+||+.|+|||++.+...++.++|+|++|++++++++|..||.+......+..+....+.+.+..|+.
T Consensus       178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  246 (311)
T 3niz_A          178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ  246 (311)
T ss_dssp             CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGG
T ss_pred             CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhh
Confidence            457899999999987755588999999999999999999999999888888888888777777766553

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.57  E-value=1.8e-14  Score=81.91  Aligned_cols=59  Identities=22%  Similarity=0.430  Sum_probs=51.1

Q ss_pred             CCccccccccCchhhhccc---cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGAR---MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~---~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      .+.+||+.|+|||++.+..   .++.++|+|++|+++|++++|..||.+.+....+..|...
T Consensus       227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  288 (410)
T 3v8s_A          227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH  288 (410)
T ss_dssp             CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred             cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc
Confidence            4678999999999987643   2678999999999999999999999999998888888653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.56  E-value=1.7e-14  Score=82.42  Aligned_cols=58  Identities=19%  Similarity=0.348  Sum_probs=51.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+...
T Consensus       307 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~  364 (446)
T 4ejn_A          307 KTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME  364 (446)
T ss_dssp             CCSSSCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             ccccCCccccCHhhcCCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC
Confidence            4578999999999998877 899999999999999999999999998888777777654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.56  E-value=2.1e-14  Score=79.25  Aligned_cols=58  Identities=24%  Similarity=0.496  Sum_probs=51.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|+++|++++|..||.+.+....+..+...
T Consensus       179 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  236 (327)
T 3a62_A          179 HTFCGTIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC  236 (327)
T ss_dssp             CTTSSCCTTSCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT
T ss_pred             cccCCCcCccCHhhCcCCC-CCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence            3567999999999998776 889999999999999999999999999888888777664

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.55  E-value=1.9e-14  Score=81.47  Aligned_cols=45  Identities=27%  Similarity=0.511  Sum_probs=41.4

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      .+++||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+
T Consensus       211 ~~~~gt~~Y~aPE~l~~~~-~~~~~DiwslGvllyell~G~~Pf~~  255 (396)
T 4dc2_A          211 STFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDI  255 (396)
T ss_dssp             CCCCBCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             ccccCCcccCCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            4678999999999998877 89999999999999999999999964

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.55  E-value=1.1e-14  Score=81.67  Aligned_cols=65  Identities=34%  Similarity=0.691  Sum_probs=53.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      +..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.+....+..|....+.|+.
T Consensus       187 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~  251 (367)
T 2fst_X          187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA  251 (367)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred             CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            34678999999999887444889999999999999999999999999998888888877666543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.55  E-value=1.1e-14  Score=82.94  Aligned_cols=64  Identities=47%  Similarity=0.881  Sum_probs=56.4

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      .+.+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....+.|+.
T Consensus       257 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~  320 (429)
T 3kvw_A          257 YTYIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ  320 (429)
T ss_dssp             CSSCSCGGGCCHHHHHTBC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             cccCCCCCccChHHHhCCC-CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            3568999999999998877 899999999999999999999999999999988888877665543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.55  E-value=1.7e-14  Score=81.02  Aligned_cols=64  Identities=42%  Similarity=0.845  Sum_probs=55.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ...+||+.|+|||++.+...++.++|+|++|++++++++|..||.+.+..+.+..+.+..+.|.
T Consensus       199 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~  262 (383)
T 3eb0_A          199 VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPT  262 (383)
T ss_dssp             CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             cCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            3567899999999988755588999999999999999999999999999999888887666553

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.55  E-value=1.6e-14  Score=80.88  Aligned_cols=65  Identities=32%  Similarity=0.650  Sum_probs=56.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      +..+||+.|+|||++.+...++...|+|++|++++++++|..||.+.+....+..|....+.|+.
T Consensus       183 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~  247 (367)
T 1cm8_A          183 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA  247 (367)
T ss_dssp             CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence            45678999999999987444889999999999999999999999999998888888877666543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.54  E-value=8.4e-15  Score=80.37  Aligned_cols=43  Identities=28%  Similarity=0.524  Sum_probs=34.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ++.|||+.|+|||++.+.. |+.++|+||+||++|++++   ||.+.
T Consensus       188 ~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyell~---Pf~~~  230 (299)
T 4g31_A          188 TGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELLY---PFSTQ  230 (299)
T ss_dssp             ----CCCTTSCHHHHTTCC-CCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred             CCcccCccccCHHHHcCCC-CCCHHHHHHHHHHHHHHcc---CCCCc
Confidence            3568999999999998877 9999999999999999984   67543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.54  E-value=3.5e-14  Score=79.06  Aligned_cols=45  Identities=27%  Similarity=0.511  Sum_probs=41.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      .+.+||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+
T Consensus       168 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          168 STFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             CCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccCCCccccCccccCCCC-CChHHhHHHHHHHHHHHHhCCCCcCC
Confidence            4578999999999998876 89999999999999999999999965

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.54  E-value=3.5e-14  Score=83.10  Aligned_cols=74  Identities=22%  Similarity=0.354  Sum_probs=54.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC----hHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES----DLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      .++||+.|+|||++.+.. ++.++|+|++|+++|++++|..||.+..    .......+....     ..+|...+..+.
T Consensus       348 ~~~GT~~Y~APE~l~~~~-~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~  421 (543)
T 3c4z_A          348 GYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA-----VTYPDKFSPASK  421 (543)
T ss_dssp             CCCSCTTTSCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC-----CCCCTTSCHHHH
T ss_pred             cccCCccccChhhhcCCC-CChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc-----cCCCcccCHHHH
Confidence            468999999999998876 8999999999999999999999998763    344555554431     223344455555


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++|+
T Consensus       422 ~li~  425 (543)
T 3c4z_A          422 DFCE  425 (543)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5554

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.52  E-value=3.1e-14  Score=79.12  Aligned_cols=63  Identities=38%  Similarity=0.811  Sum_probs=54.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.+....+..+....+.++
T Consensus       190 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  252 (360)
T 3e3p_A          190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS  252 (360)
T ss_dssp             STTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             cccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCC
Confidence            457899999999987655588999999999999999999999999998888888877655544

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.52  E-value=8.2e-14  Score=78.23  Aligned_cols=78  Identities=22%  Similarity=0.269  Sum_probs=60.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.... ++.+.|+|++|++++++++|..||.+.+....+..+......++...+ ...+.++.+||+
T Consensus       247 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~li~  324 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDF-VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEF-QDISEEAKEFIS  324 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCB-CCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGG-TTSCHHHHHHHH
T ss_pred             cccCCCcEeChhhccCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhh-ccCCHHHHHHHH
Confidence            456999999999987766 889999999999999999999999999988888888765433333222 234555666654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.52  E-value=2e-14  Score=80.52  Aligned_cols=63  Identities=33%  Similarity=0.760  Sum_probs=50.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....+.++
T Consensus       184 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  246 (371)
T 2xrw_A          184 TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC  246 (371)
T ss_dssp             ------CTTCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCC
T ss_pred             CCceecCCccCHHHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            3467899999999998876 88999999999999999999999999998888888877665543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.52  E-value=4.4e-14  Score=78.60  Aligned_cols=63  Identities=19%  Similarity=0.448  Sum_probs=54.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ...+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....+.++
T Consensus       217 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p  279 (360)
T 3llt_A          217 GSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIP  279 (360)
T ss_dssp             CSCCSCGGGCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCC
T ss_pred             cCccCcccccCcHHHcCCC-CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCC
Confidence            4567899999999998877 88999999999999999999999999998888888776655443

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.51  E-value=2.3e-14  Score=82.06  Aligned_cols=65  Identities=46%  Similarity=0.831  Sum_probs=45.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-----------cCCCCCCCC--------------------h
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGES--------------------D   51 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-----------~~~~~~~~~--------------------~   51 (85)
                      +..+||+.|+|||++.....++.++|+|++||+++++++           +.++|.|.+                    .
T Consensus       241 ~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~  320 (458)
T 3rp9_A          241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGN  320 (458)
T ss_dssp             ----CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHH
T ss_pred             cCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCC
Confidence            345789999999987654448999999999999999998           677777654                    2


Q ss_pred             HHHHHHHHhhcCCCCC
Q psy13989         52 LDQLTRIFQTLGTPSE   67 (85)
Q Consensus        52 ~~~~~~i~~~~~~~~~   67 (85)
                      ...+..|...++.|+.
T Consensus       321 ~~~l~~i~~~~g~p~~  336 (458)
T 3rp9_A          321 RDQLNVIFNILGTPSE  336 (458)
T ss_dssp             HHHHHHHHHHHCCCCH
T ss_pred             HHHHHHHHHHcCCCCH
Confidence            4556666666666554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.51  E-value=3e-14  Score=79.57  Aligned_cols=65  Identities=38%  Similarity=0.787  Sum_probs=54.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE   67 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (85)
                      +..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.+....+..+....+.++.
T Consensus       189 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  253 (364)
T 3qyz_A          189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ  253 (364)
T ss_dssp             CCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCH
T ss_pred             cccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            34589999999999876555889999999999999999999999999888888887766555543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.50  E-value=1e-13  Score=76.08  Aligned_cols=66  Identities=38%  Similarity=0.840  Sum_probs=56.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+....+..+....+.+....|
T Consensus       178 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  243 (326)
T 1blx_A          178 SVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  243 (326)
T ss_dssp             CCCCCCTTCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             ccccccceeCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence            457899999999998776 889999999999999999999999999988888888776665554444

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.50  E-value=1.8e-13  Score=75.42  Aligned_cols=78  Identities=18%  Similarity=0.314  Sum_probs=57.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+...  .++....+...+..+.+++
T Consensus       199 ~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li  275 (321)
T 2c30_A          199 KSLVGTPYWMAPEVISRSL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS--PPPKLKNSHKVSPVLRDFL  275 (321)
T ss_dssp             CCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--SCCCCTTGGGSCHHHHHHH
T ss_pred             ccccCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCcCccccCCHHHHHHH
Confidence            3567999999999997776 888999999999999999999999988887777666543  2222222334445555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       276 ~  276 (321)
T 2c30_A          276 E  276 (321)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.50  E-value=2.9e-14  Score=77.67  Aligned_cols=56  Identities=20%  Similarity=0.354  Sum_probs=45.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|+++|++++|..||.+.+..........
T Consensus       171 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~  226 (294)
T 4eqm_A          171 HVLGTVQYFSPEQAKGEA-TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ  226 (294)
T ss_dssp             ----CCSSCCHHHHHTCC-CCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHS
T ss_pred             ccccCccccCHhHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhh
Confidence            357899999999998876 88899999999999999999999999887666544443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.49  E-value=1.5e-13  Score=76.94  Aligned_cols=76  Identities=14%  Similarity=0.231  Sum_probs=58.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ...||+.|+|||++.+.. ++.++|+|++|++++++++ |..||.+.+.......+........+..++......+..
T Consensus       245 ~~~~t~~y~aPE~~~~~~-~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~  321 (367)
T 3l9p_A          245 CAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQ  321 (367)
T ss_dssp             GGGSCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             CcCCcccEECHHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHH
Confidence            355788999999998776 8999999999999999998 999999999888887777665544444445444343333

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.49  E-value=2.1e-13  Score=77.02  Aligned_cols=78  Identities=26%  Similarity=0.311  Sum_probs=59.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+.+....+..+.......+... ....+.++.+||+
T Consensus       209 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~  286 (387)
T 1kob_A          209 VTTATAEFAAPEIVDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA-FSSVSPEAKDFIK  286 (387)
T ss_dssp             EECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSST-TTTSCHHHHHHHH
T ss_pred             eeccCCCccCchhccCCC-CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc-cccCCHHHHHHHH
Confidence            357899999999998776 88999999999999999999999999988888877766433332222 2334555566554

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.49  E-value=5.3e-14  Score=77.59  Aligned_cols=77  Identities=17%  Similarity=0.239  Sum_probs=58.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      .+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+....+..+......++...+ ...+.++.++++
T Consensus       163 ~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~s~~~~~li~  239 (321)
T 1tki_A          163 LFTAPEYYAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF-KEISIEAMDFVD  239 (321)
T ss_dssp             EESCGGGSCHHHHTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH-TTSCHHHHHHHH
T ss_pred             ccCChhhcCcHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhh-ccCCHHHHHHHH
Confidence            56899999999998776 889999999999999999999999999988888777765433332221 234455555554

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.48  E-value=2.3e-13  Score=75.76  Aligned_cols=79  Identities=27%  Similarity=0.303  Sum_probs=52.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHH-HHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLD-QLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+..... .+..+.......+.+ +....+.++.++
T Consensus       208 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~l  285 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISP-WWDEVSLNAKDL  285 (349)
T ss_dssp             -----CGGGSCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTT-TTTTSCHHHHHH
T ss_pred             ccccCCCCccCHHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCc-hhhhCCHHHHHH
Confidence            3467899999999998776 8899999999999999999999998766544 444454432222222 223344555555


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      |+
T Consensus       286 i~  287 (349)
T 2w4o_A          286 VR  287 (349)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.48  E-value=2.5e-13  Score=73.79  Aligned_cols=70  Identities=44%  Similarity=0.880  Sum_probs=55.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCC-CCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPF-LPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      +..+||+.|+|||++.+...++.++|+|++|++++++++|..| |.+.+....+..+....+.+....|+.
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~  229 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS  229 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTT
T ss_pred             cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence            3457899999999997765578999999999999999976554 777777888888887777766665543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.48  E-value=2.7e-13  Score=78.18  Aligned_cols=77  Identities=27%  Similarity=0.393  Sum_probs=59.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+ . ++.++|+|++|+++|++++|..||.+.+....+..+.......+.+.| ...+.++.++|+
T Consensus       182 ~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~s~~~~~li~  258 (486)
T 3mwu_A          182 DRIGTAYYIAPEVLRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW-RTISDDAKDLIR  258 (486)
T ss_dssp             CCTTGGGGCCGGGGGS-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGG-GGSCHHHHHHHH
T ss_pred             CCcCCCCCCCHHHhCC-C-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccc-CCCCHHHHHHHH
Confidence            4579999999999865 3 889999999999999999999999999998888888765444333332 234455666554

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.48  E-value=1.7e-13  Score=76.99  Aligned_cols=63  Identities=33%  Similarity=0.780  Sum_probs=55.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ...+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+....+..+....+.++
T Consensus       216 ~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~  278 (382)
T 2vx3_A          216 YQYIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP  278 (382)
T ss_dssp             CSSCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred             ccccCCccccChHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            3567999999999998876 88999999999999999999999999999888888887666554

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.48  E-value=2.1e-13  Score=74.88  Aligned_cols=76  Identities=16%  Similarity=0.095  Sum_probs=53.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+.....   ....|...+..+.++++
T Consensus       198 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~  273 (309)
T 3p86_A          198 SAAGTPEWMAPEVLRDEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK---RLEIPRNLNPQVAAIIE  273 (309)
T ss_dssp             ----CCTTSCHHHHTTCC-CCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCC---CCCCCTTSCHHHHHHHH
T ss_pred             cCCCCccccChhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC---CCCCCccCCHHHHHHHH
Confidence            467899999999998876 88899999999999999999999998888777666543221   22233444455555543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.48  E-value=1.5e-13  Score=77.01  Aligned_cols=62  Identities=24%  Similarity=0.454  Sum_probs=49.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC------hHHHHHHHHhhcCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------DLDQLTRIFQTLGTP   65 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~~   65 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+      ....+..+....+.+
T Consensus       251 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  318 (397)
T 1wak_A          251 TEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKV  318 (397)
T ss_dssp             CSCCSCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSC
T ss_pred             ccCCCCCcccCChhhcCCC-CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCC
Confidence            3467899999999998877 8899999999999999999999997655      345555555554443

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.48  E-value=1.3e-13  Score=81.23  Aligned_cols=75  Identities=19%  Similarity=0.308  Sum_probs=54.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC----hHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES----DLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      +..+||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+..    .......+...     +..++...+.++
T Consensus       343 ~~~~GT~~Y~APEvl~~~~-~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-----~~~~p~~~s~~~  416 (576)
T 2acx_A          343 KGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-----PEEYSERFSPQA  416 (576)
T ss_dssp             ECCCSCGGGCCHHHHTTCE-ESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-----CCCCCTTSCHHH
T ss_pred             cccCCCccccCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-----cccCCccCCHHH
Confidence            3568999999999998876 8899999999999999999999998764    23344334322     223344555566


Q ss_pred             hhhhh
Q psy13989         79 FSLIR   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      .++|+
T Consensus       417 ~dLI~  421 (576)
T 2acx_A          417 RSLCS  421 (576)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66554

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.48  E-value=1.7e-13  Score=79.21  Aligned_cols=59  Identities=20%  Similarity=0.325  Sum_probs=50.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      .+.+||+.|+|||++.+....+.++|+|++|++++++++|..||.+.+.......+...
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~  231 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG  231 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT
T ss_pred             cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence            45689999999999987763478899999999999999999999988877777777654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.48  E-value=1.4e-13  Score=76.02  Aligned_cols=78  Identities=22%  Similarity=0.261  Sum_probs=57.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++..+|+|++|++++++++|..||.+......+..+.......+. ......+..+.++++
T Consensus       176 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~  253 (326)
T 2y0a_A          176 NIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED-EYFSNTSALAKDFIR  253 (326)
T ss_dssp             CCCSCTTTCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCH-HHHTTSCHHHHHHHH
T ss_pred             cccCCcCcCCceeecCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCc-cccccCCHHHHHHHH
Confidence            457999999999987776 889999999999999999999999998888877777654332222 122334445555543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.47  E-value=2.5e-13  Score=78.47  Aligned_cols=78  Identities=26%  Similarity=0.421  Sum_probs=59.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...+||+.|+|||++.. . ++.++|+|++|+++|++++|..||.+.+....+..+.......+.+.|+ ..+..+.++|
T Consensus       196 ~~~~gt~~y~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~s~~~~~li  272 (494)
T 3lij_A          196 KERLGTAYYIAPEVLRK-K-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK-NVSEGAKDLI  272 (494)
T ss_dssp             CCCCSCTTTCCHHHHTT-C-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGT-TSCHHHHHHH
T ss_pred             cccCCCcCeeCHHHHcc-c-CCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcc-cCCHHHHHHH
Confidence            35679999999998753 4 8889999999999999999999999999988888887765444444332 2344555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       273 ~  273 (494)
T 3lij_A          273 K  273 (494)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.47  E-value=2.1e-13  Score=78.51  Aligned_cols=76  Identities=29%  Similarity=0.451  Sum_probs=58.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      .+||+.|+|||++.+ . ++.++|+|++|+++|++++|..||.+.+....+..+.......+.+.| ...+..+.++|+
T Consensus       188 ~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~s~~~~~li~  263 (484)
T 3nyv_A          188 KIGTAYYIAPEVLHG-T-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAKDLIR  263 (484)
T ss_dssp             HTTGGGTCCHHHHHT-C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGG-GGSCHHHHHHHH
T ss_pred             CCCCccccCceeecC-C-CCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCccc-ccCCHHHHHHHH
Confidence            468999999999876 3 888999999999999999999999999998888888765444333332 234455556554

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.47  E-value=1.7e-13  Score=77.54  Aligned_cols=79  Identities=27%  Similarity=0.336  Sum_probs=49.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHH----HHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLD----QLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      +..+||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+.+...    ....+.......+.+.+ ...+.++
T Consensus       221 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~s~~~  298 (400)
T 1nxk_A          221 TTPCYTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW-SEVSEEV  298 (400)
T ss_dssp             ------CTTCCGGGSCCCC-SSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTT-TTSCHHH
T ss_pred             ccCCCCCCccCHhhcCCCC-CCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccc-ccCCHHH
Confidence            3568899999999987766 8899999999999999999999998765322    33344433222332222 2244555


Q ss_pred             hhhhh
Q psy13989         79 FSLIR   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      .+||+
T Consensus       299 ~~li~  303 (400)
T 1nxk_A          299 KMLIR  303 (400)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55554

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.46  E-value=4e-13  Score=77.00  Aligned_cols=76  Identities=17%  Similarity=0.308  Sum_probs=59.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ..++..|+|||++.... ++.++|+|++|+++|++++ |..||.+.+..+....+......+.+..+|......+...
T Consensus       345 ~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c  421 (454)
T 1qcf_A          345 AKFPIKWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRC  421 (454)
T ss_dssp             SSSCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred             CcccccccCHHHhccCC-CCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            34567899999998776 8999999999999999998 9999999998888888877766665555555444444333

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.46  E-value=1.6e-13  Score=76.30  Aligned_cols=79  Identities=19%  Similarity=0.238  Sum_probs=56.4

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC---CChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG---ESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      .+.+||+.|+|||++.+.. ++..+|+|++|+++|++++|..||.+   ......+..+.......+.. .....+.++.
T Consensus       178 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~  255 (342)
T 2qr7_A          178 MTPCYTANFVAPEVLERQG-YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG-YWNSVSDTAK  255 (342)
T ss_dssp             CCSSCCSSCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCST-TTTTSCHHHH
T ss_pred             eccCCCccccCHHHhcCCC-CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcc-ccccCCHHHH
Confidence            3568899999999998766 88899999999999999999999976   34556666665543332222 2233445555


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++|+
T Consensus       256 ~li~  259 (342)
T 2qr7_A          256 DLVS  259 (342)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5554

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.45  E-value=1e-13  Score=75.28  Aligned_cols=46  Identities=15%  Similarity=0.078  Sum_probs=41.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.
T Consensus       176 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          176 KNLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             CCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cCCCCCcccCCchhhcCCC-CChHHHHHHHHHHHHHHHcCCCCcchh
Confidence            3567999999999988776 889999999999999999999999874

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.45  E-value=5.9e-13  Score=73.21  Aligned_cols=62  Identities=23%  Similarity=0.495  Sum_probs=52.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ...+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+.......+....+..
T Consensus       192 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  253 (339)
T 1z57_A          192 STLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL  253 (339)
T ss_dssp             CSSCSCGGGCCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSC
T ss_pred             ccccCCccccChHHhhCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            3567899999999998776 8899999999999999999999999988877777666655443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.45  E-value=6.3e-13  Score=73.34  Aligned_cols=78  Identities=24%  Similarity=0.249  Sum_probs=57.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+.......+... ....+..+.++++
T Consensus       192 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~li~  269 (327)
T 3lm5_A          192 EIMGTPEYLAPEILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET-FSSVSQLATDFIQ  269 (327)
T ss_dssp             --CCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT-TTTSCHHHHHHHH
T ss_pred             cccCCcCccCCeeecCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchh-hcccCHHHHHHHH
Confidence            457899999999998776 88999999999999999999999999888887777765443333332 2334444545443

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.45  E-value=5.6e-13  Score=75.29  Aligned_cols=48  Identities=27%  Similarity=0.371  Sum_probs=40.7

Q ss_pred             CCccccccccCchhhhcc--ccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~--~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ++.+||+.|+|||++...  ..++..+|+|++|+++|++++|..||.+..
T Consensus       172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~  221 (384)
T 4fr4_A          172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS  221 (384)
T ss_dssp             CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCT
T ss_pred             eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCC
Confidence            467899999999998642  237889999999999999999999997543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.44  E-value=2.2e-13  Score=77.72  Aligned_cols=66  Identities=44%  Similarity=0.810  Sum_probs=49.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-----------cCCCCCCCC-----------------hHHH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGES-----------------DLDQ   54 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-----------~~~~~~~~~-----------------~~~~   54 (85)
                      +..+||+.|+|||++.....++.++|+|++||+++++++           +.++|.|.+                 ...+
T Consensus       209 ~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~q  288 (432)
T 3n9x_A          209 TSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQ  288 (432)
T ss_dssp             --CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHH
T ss_pred             cCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHH
Confidence            567899999999997655458999999999999999997           556665544                 3566


Q ss_pred             HHHHHhhcCCCCCC
Q psy13989         55 LTRIFQTLGTPSED   68 (85)
Q Consensus        55 ~~~i~~~~~~~~~~   68 (85)
                      +..|...++.|+..
T Consensus       289 l~~i~~~~g~p~~~  302 (432)
T 3n9x_A          289 LNIIFNIIGTPTED  302 (432)
T ss_dssp             HHHHHHHHCSCCHH
T ss_pred             HHHHHHhcCCCCHH
Confidence            66676666666543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.44  E-value=1e-12  Score=70.94  Aligned_cols=77  Identities=23%  Similarity=0.298  Sum_probs=58.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+.......+.+.+ ...+.++.+++
T Consensus       166 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li  242 (284)
T 3kk8_A          166 GFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW-DTVTPEAKSLI  242 (284)
T ss_dssp             CSCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTT-TTSCHHHHHHH
T ss_pred             CCCCCcCCcCchhhcCCC-CCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhh-cccCHHHHHHH
Confidence            457899999999998776 889999999999999999999999999888888777665443333322 22334444444

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.44  E-value=8e-13  Score=70.82  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=54.7

Q ss_pred             CCccccccccCchhhhcccc--CCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARM--YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~--~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ....||+.|+|||++.+...  ++.+.|+|++|++++++++|..||.+.+.......+......   +..+...+..+.+
T Consensus       166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  242 (271)
T 3kmu_A          166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR---PTIPPGISPHVSK  242 (271)
T ss_dssp             TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCC---CCCCTTCCHHHHH
T ss_pred             cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCC---CCCCCCCCHHHHH
Confidence            34578999999999876541  233799999999999999999999988887776666543222   2233344445555


Q ss_pred             hhh
Q psy13989         81 LIR   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus       243 li~  245 (271)
T 3kmu_A          243 LMK  245 (271)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.44  E-value=5.6e-13  Score=74.77  Aligned_cols=66  Identities=20%  Similarity=0.349  Sum_probs=51.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ..+|+.|+|||++.+.. ++.++|+|++|+++|++++ |..||.+.+.......+........+..++
T Consensus       265 ~~~t~~y~aPE~~~~~~-~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (370)
T 2psq_A          265 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT  331 (370)
T ss_dssp             TTSCGGGCCHHHHHTCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSC
T ss_pred             CCcccceECHhHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCC
Confidence            45677899999998876 8999999999999999998 999999888777776665554433333333

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.44  E-value=6.4e-13  Score=73.48  Aligned_cols=79  Identities=24%  Similarity=0.352  Sum_probs=56.4

Q ss_pred             CccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...||+.|+|||++... ..++.+.|+|++|++++++++|..||.+.+.......+.......+.+.+ ...+..+.++|
T Consensus       233 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li  311 (345)
T 3hko_A          233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY-NVLSPLARDLL  311 (345)
T ss_dssp             --CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGG-GGSCHHHHHHH
T ss_pred             ccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCccc-ccCCHHHHHHH
Confidence            45789999999998752 33888999999999999999999999998888887777654333322221 22445555554


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       312 ~  312 (345)
T 3hko_A          312 S  312 (345)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.44  E-value=8.4e-13  Score=73.05  Aligned_cols=63  Identities=17%  Similarity=0.415  Sum_probs=53.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+......+..+....+.++
T Consensus       197 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  259 (355)
T 2eu9_A          197 TTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP  259 (355)
T ss_dssp             CSSCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cCCcCCCcccCCeeeecCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc
Confidence            3567999999999998776 88999999999999999999999999888777777666554433

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.43  E-value=2.7e-13  Score=74.30  Aligned_cols=57  Identities=19%  Similarity=0.376  Sum_probs=46.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+...
T Consensus       178 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~  234 (311)
T 3ork_A          178 AVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE  234 (311)
T ss_dssp             ----CCTTCCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC
T ss_pred             ccCcCcccCCHHHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC
Confidence            356899999999998876 889999999999999999999999998877776555543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.43  E-value=5.7e-13  Score=75.19  Aligned_cols=78  Identities=18%  Similarity=0.329  Sum_probs=51.8

Q ss_pred             CCccccccccCchhhhcc----------ccCCchhHHHhHHHHHHHHHHcCCCCCCCCh-HHHHHHHHhhcCCCCCCCcc
Q psy13989          3 NWKKVRKAFMAPELLFGA----------RMYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~----------~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ...+||+.|+|||++.+.          ..++.++|+|++|+++|++++|..||.+... ...+..+...   .....+|
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~---~~~~~~~  290 (390)
T 2zmd_A          214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP---NHEIEFP  290 (390)
T ss_dssp             CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCT---TSCCCCC
T ss_pred             CCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCc---cccCCCC
Confidence            356799999999998652          2388899999999999999999999987543 3344344322   1222233


Q ss_pred             hhchhhhhhhhh
Q psy13989         72 TAGVKGLFSLIR   83 (85)
Q Consensus        72 ~~~~~~~~~~~~   83 (85)
                      ...+..+.++|+
T Consensus       291 ~~~~~~~~~li~  302 (390)
T 2zmd_A          291 DIPEKDLQDVLK  302 (390)
T ss_dssp             CCSCHHHHHHHH
T ss_pred             ccchHHHHHHHH
Confidence            333445555543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.43  E-value=8.2e-13  Score=73.66  Aligned_cols=62  Identities=29%  Similarity=0.636  Sum_probs=46.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC------hHHHHHHHHhhcCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------DLDQLTRIFQTLGTP   65 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~~   65 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.+      ....+..+....+.+
T Consensus       193 ~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  260 (373)
T 1q8y_A          193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL  260 (373)
T ss_dssp             CSCCSCGGGCCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSC
T ss_pred             CCCCCCccccCcHHHhCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCC
Confidence            3457899999999998877 8899999999999999999999998654      334445555544433

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.43  E-value=1.7e-13  Score=75.61  Aligned_cols=47  Identities=15%  Similarity=0.076  Sum_probs=42.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+
T Consensus       175 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~Pf~~~~  221 (330)
T 2izr_A          175 KSLTGTARYMSINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQGLK  221 (330)
T ss_dssp             CCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CCcCCCccccChHHHcCCC-CCchhHHHHHHHHHHHHhcCCCCccccc
Confidence            4678999999999998876 8999999999999999999999998743

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.43  E-value=1e-12  Score=73.25  Aligned_cols=59  Identities=27%  Similarity=0.386  Sum_probs=49.0

Q ss_pred             CCccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..+||+.|+|||++.+  ...++.++|+|++|++++++++|..||.+.+....+..+...
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~  268 (348)
T 1u5q_A          208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  268 (348)
T ss_dssp             CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred             CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence            35679999999999863  233888999999999999999999999988887777666554

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.43  E-value=5.6e-13  Score=73.31  Aligned_cols=78  Identities=23%  Similarity=0.278  Sum_probs=58.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+....+..+.......+ ...+...+..+.++|+
T Consensus       177 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~li~  254 (321)
T 2a2a_A          177 NIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD-EEFFSHTSELAKDFIR  254 (321)
T ss_dssp             CCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC-HHHHTTCCHHHHHHHH
T ss_pred             ccCCCCCccCcccccCCC-CCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccC-hhhhcccCHHHHHHHH
Confidence            456899999999998776 88999999999999999999999999888877777665432222 1222334455555554

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.43  E-value=7e-13  Score=76.03  Aligned_cols=76  Identities=20%  Similarity=0.308  Sum_probs=59.3

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .++..|+|||++.... ++.++|+|++|+++|++++ |..||.+....+....+......+.+..+|....+.+...+
T Consensus       342 ~~~~~y~aPE~~~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  418 (452)
T 1fmk_A          342 KFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  418 (452)
T ss_dssp             -CCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             cccccccCHhHHhcCC-CCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            4567899999998776 8999999999999999999 99999999988888888777666655555554444444333

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.42  E-value=1.1e-12  Score=71.53  Aligned_cols=77  Identities=19%  Similarity=0.242  Sum_probs=57.3

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      .+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.........+.......+.+ .+...+..+.++++
T Consensus       167 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~  243 (304)
T 2jam_A          167 ACGTPGYVAPEVLAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP-FWDDISESAKDFIC  243 (304)
T ss_dssp             HHSCCCBCCTTTBSSCS-CCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTT-TTTTSCHHHHHHHH
T ss_pred             ccCCCCccChHHhccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcc-ccccCCHHHHHHHH
Confidence            45889999999987776 8899999999999999999999999988887777776654333222 22233444444443

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.41  E-value=9.8e-13  Score=72.60  Aligned_cols=75  Identities=17%  Similarity=0.260  Sum_probs=58.0

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      .+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+......+.+..++....+.+..+
T Consensus       215 ~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  290 (325)
T 3kul_A          215 KIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDC  290 (325)
T ss_dssp             -CCGGGSCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCcccccCHhHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHH
Confidence            3566799999998776 8899999999999999998 9999999988888888777655555555555444444433

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.41  E-value=4.2e-14  Score=78.55  Aligned_cols=49  Identities=20%  Similarity=0.329  Sum_probs=42.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ...+||+.|+|||++.+....+.++|+|++|++++++++|..||.+...
T Consensus       165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~  213 (336)
T 3h4j_B          165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI  213 (336)
T ss_dssp             CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS
T ss_pred             ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH
Confidence            4568999999999998776347889999999999999999999987654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.41  E-value=1.5e-12  Score=70.16  Aligned_cols=58  Identities=22%  Similarity=0.339  Sum_probs=48.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ..|++.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+.....
T Consensus       176 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~  233 (279)
T 2w5a_A          176 FVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF  233 (279)
T ss_dssp             HHSCCTTCCHHHHHCC--CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             cCCCccccChHHhccCC-CCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccc
Confidence            46889999999998776 88999999999999999999999998887777777665543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.41  E-value=4.4e-13  Score=77.66  Aligned_cols=78  Identities=23%  Similarity=0.342  Sum_probs=58.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...+||+.|+|||++.+ . ++.++|+|++|++++++++|..||.+.+....+..+.......+...| ...+.++.++|
T Consensus       206 ~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~s~~~~~li  282 (504)
T 3q5i_A          206 RDRLGTAYYIAPEVLKK-K-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW-KNISDEAKELI  282 (504)
T ss_dssp             CCCCSCTTTCCHHHHTT-C-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH-TTSCHHHHHHH
T ss_pred             ccccCCcCCCCHHHhcc-C-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc-CCCCHHHHHHH
Confidence            35679999999999764 3 888999999999999999999999999988888888765333222221 23445555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       283 ~  283 (504)
T 3q5i_A          283 K  283 (504)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.41  E-value=1.2e-12  Score=70.70  Aligned_cols=57  Identities=19%  Similarity=0.374  Sum_probs=48.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+|++.|+|||++.+.. ++...|+|++|++++++++|..||.+.+.......+...
T Consensus       166 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  222 (279)
T 3fdn_A          166 DLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV  222 (279)
T ss_dssp             --CCCCTTCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT
T ss_pred             ccCCCCCccCHhHhccCC-CCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhC
Confidence            457899999999988766 788999999999999999999999998887777776554

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.41  E-value=9.1e-13  Score=78.31  Aligned_cols=75  Identities=13%  Similarity=0.120  Sum_probs=56.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ..+|+.|+|||++.... ++.++|+|++|++++++++ |..||.+.+.......+......+.+..+|....+.+..
T Consensus       532 ~~~t~~y~APE~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~  607 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNL  607 (635)
T ss_dssp             ---CGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCceeeeChhhhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            34667899999998776 8999999999999999998 999999999888888887765555455555444333333

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.41  E-value=6.1e-13  Score=74.54  Aligned_cols=63  Identities=35%  Similarity=0.680  Sum_probs=53.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      +..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.+..+.+..+....+.+
T Consensus       199 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~  261 (371)
T 4exu_A          199 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP  261 (371)
T ss_dssp             -CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            346789999999999874448899999999999999999999999999888888877655544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.41  E-value=1.4e-12  Score=70.55  Aligned_cols=58  Identities=21%  Similarity=0.391  Sum_probs=49.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...+|++.|+|||++.+.. ++...|+|++|++++++++|..||.+.+.......+...
T Consensus       170 ~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  227 (284)
T 2vgo_A          170 RTMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV  227 (284)
T ss_dssp             CCCCSCGGGCCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT
T ss_pred             ccccCCCCcCCHHHhccCC-CCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc
Confidence            3467899999999998776 888999999999999999999999988877776666543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.41  E-value=5.4e-13  Score=73.30  Aligned_cols=43  Identities=23%  Similarity=0.284  Sum_probs=33.5

Q ss_pred             CccccccccCchhhhccc-----cCCchhHHHhHHHHHHHHHHcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGAR-----MYGVGIDMWAVGCIICELLLKAPFL   46 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~-----~~~~~~~~ws~g~~~~~~~~~~~~~   46 (85)
                      +.+||+.|+|||++.+..     .++.++|+||+|+++||+++|.+|+
T Consensus       171 ~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             ---CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             cccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence            468999999999986531     2667899999999999999986544

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.41  E-value=8.6e-13  Score=73.35  Aligned_cols=61  Identities=34%  Similarity=0.658  Sum_probs=50.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT   64 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   64 (85)
                      ..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.+....+..+....+.
T Consensus       182 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  242 (353)
T 3coi_A          182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV  242 (353)
T ss_dssp             --CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCB
T ss_pred             ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            4578999999999877444888999999999999999999999999888777777665443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.41  E-value=1.7e-12  Score=72.33  Aligned_cols=57  Identities=26%  Similarity=0.394  Sum_probs=46.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.. ......+...
T Consensus       191 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~  247 (351)
T 3c0i_A          191 GGRVGTPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKG  247 (351)
T ss_dssp             CCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHT
T ss_pred             cCCcCCcCccCHHHHcCCC-CCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcC
Confidence            3467999999999998776 8899999999999999999999998753 4455555544

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.40  E-value=7.7e-13  Score=75.81  Aligned_cols=74  Identities=20%  Similarity=0.275  Sum_probs=56.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ..++..|+|||++.+.. ++.++|+|++|+++|++++ |..||.+.+..+....+..+...+.+..+|......+.
T Consensus       346 ~~~~~~y~aPE~~~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~  420 (450)
T 1k9a_A          346 GKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMK  420 (450)
T ss_dssp             -CCCTTTSCHHHHHSSC-CCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             CCCCcceeCHHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence            35678899999998877 8999999999999999998 99999988877777777766555544444444433333

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.40  E-value=1.7e-12  Score=71.74  Aligned_cols=68  Identities=19%  Similarity=0.299  Sum_probs=52.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ...+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+........+..+|.
T Consensus       235 ~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (343)
T 1luf_A          235 NDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPL  303 (343)
T ss_dssp             -CCBCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred             CCcccceecChhhhccCC-cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCH
Confidence            345778899999998776 8899999999999999998 9999999888777777765543333333443

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.40  E-value=2.7e-12  Score=71.21  Aligned_cols=62  Identities=35%  Similarity=0.733  Sum_probs=51.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      ..+||+.|+|||++.....++.+.|+|++|++++++++|..||.+.+....+..+....+.+
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (353)
T 2b9h_A          181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP  242 (353)
T ss_dssp             CCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             hccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence            35789999999998764448899999999999999999999999988877777766554444

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.40  E-value=8.8e-13  Score=73.17  Aligned_cols=77  Identities=18%  Similarity=0.327  Sum_probs=49.6

Q ss_pred             CccccccccCchhhhc----------cccCCchhHHHhHHHHHHHHHHcCCCCCCCCh-HHHHHHHHhhcCCCCCCCcch
Q psy13989          4 WKKVRKAFMAPELLFG----------ARMYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~----------~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ..+||+.|+|||++.+          ...++.++|+|++|++++++++|..||.+... ...+..+..   ......+|.
T Consensus       168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~  244 (343)
T 3dbq_A          168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID---PNHEIEFPD  244 (343)
T ss_dssp             --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC---TTSCCCCCC
T ss_pred             CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc---CCcccCCcc
Confidence            5679999999999864          12378899999999999999999999977543 233333322   222333444


Q ss_pred             hchhhhhhhhh
Q psy13989         73 AGVKGLFSLIR   83 (85)
Q Consensus        73 ~~~~~~~~~~~   83 (85)
                      ..+..+.++++
T Consensus       245 ~~~~~l~~li~  255 (343)
T 3dbq_A          245 IPEKDLQDVLK  255 (343)
T ss_dssp             CSCHHHHHHHH
T ss_pred             cCCHHHHHHHH
Confidence            44455555543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.40  E-value=1e-12  Score=77.77  Aligned_cols=72  Identities=15%  Similarity=0.107  Sum_probs=56.0

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      +++.|+|||++.... ++.++|+|++|+++|++++ |..||.+.+..+....+..+...+.+..+|......+.
T Consensus       501 ~~~~y~APE~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~  573 (613)
T 2ozo_A          501 WPLKWYAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMS  573 (613)
T ss_dssp             -CCTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             CccceeCHhhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence            457899999998776 8999999999999999998 99999999888888888776555544445544444333

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.40  E-value=1.3e-13  Score=74.78  Aligned_cols=46  Identities=11%  Similarity=0.044  Sum_probs=41.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ....||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+.
T Consensus       173 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          173 KNLTGTARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cccccccccCChhhhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence            3567999999999998876 889999999999999999999999764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.40  E-value=1.7e-12  Score=70.31  Aligned_cols=68  Identities=18%  Similarity=0.174  Sum_probs=52.3

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      ..+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+........+..+|..
T Consensus       173 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~  241 (287)
T 1u59_A          173 GKWPLKWYAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE  241 (287)
T ss_dssp             SCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             ccccccccCHHHhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHH
Confidence            34678899999997766 8899999999999999998 99999988887777776655433333333433

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.39  E-value=2.9e-12  Score=72.02  Aligned_cols=67  Identities=19%  Similarity=0.354  Sum_probs=52.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ..+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+........+..++.
T Consensus       253 ~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (382)
T 3tt0_A          253 GRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN  320 (382)
T ss_dssp             CCCGGGGSCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCH
T ss_pred             CCCCcceeCHHHhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCH
Confidence            45678899999998876 8999999999999999998 9999999888777777766544443333333

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.39  E-value=1.5e-12  Score=71.74  Aligned_cols=69  Identities=17%  Similarity=0.147  Sum_probs=51.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      ...|+..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+......+.+...+..
T Consensus       176 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (325)
T 3kex_A          176 EAKTPIKWMALESIHFGK-YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTID  245 (325)
T ss_dssp             ---CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTT
T ss_pred             CCCCcccccChHHhccCC-CChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHH
Confidence            345677899999998776 8899999999999999999 99999988877776666655444433333433

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.39  E-value=1.1e-12  Score=73.66  Aligned_cols=72  Identities=24%  Similarity=0.290  Sum_probs=55.5

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ++..|+|||++.... ++.++|+|++|+++|++++ |..||.+.+.......+......+.+..+|....+.+.
T Consensus       277 ~~~~y~aPE~~~~~~-~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  349 (377)
T 3cbl_A          277 VPVKWTAPEALNYGR-YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLME  349 (377)
T ss_dssp             EEGGGSCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             CCcCcCCHhHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence            466799999998776 8899999999999999998 99999998887777777666555555555544433333

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.39  E-value=1.4e-12  Score=71.90  Aligned_cols=67  Identities=19%  Similarity=0.225  Sum_probs=51.9

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ..+|..|+|||++.+.. ++.++|+|++|++++++++ |..||.+.+.......+......+.+...+.
T Consensus       179 ~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (327)
T 3poz_A          179 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI  246 (327)
T ss_dssp             -CCCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCH
T ss_pred             CCccccccChHHhccCC-CCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCH
Confidence            34577899999998876 8999999999999999999 9999998887766666655544444444443

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.39  E-value=2.6e-12  Score=70.76  Aligned_cols=73  Identities=15%  Similarity=0.255  Sum_probs=55.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      ..|++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+........+..++......+
T Consensus       205 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  278 (327)
T 2yfx_A          205 AMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM  278 (327)
T ss_dssp             GGSCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             cCCCcceeCHhHhcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence            45688899999988776 8899999999999999998 9999998888777777766544444444444333333

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.39  E-value=1.7e-12  Score=75.78  Aligned_cols=77  Identities=19%  Similarity=0.303  Sum_probs=60.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ..++..|+|||++.... ++.+.|+|++|+++|++++ |..||.+....+.+..+......+.+..++....+.+..++
T Consensus       424 ~~~~~~y~aPE~~~~~~-~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  501 (535)
T 2h8h_A          424 AKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  501 (535)
T ss_dssp             TTSCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CcCcccccCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            34567899999998776 8999999999999999999 89999999988888888777666555555554444444333

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.39  E-value=3.2e-12  Score=68.67  Aligned_cols=66  Identities=17%  Similarity=0.245  Sum_probs=52.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ..+++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+........+...+
T Consensus       167 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (269)
T 4hcu_A          167 TKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS  233 (269)
T ss_dssp             TTCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSC
T ss_pred             cccccccCCHHHhcCCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCC
Confidence            34667899999998776 8899999999999999998 999999988888877776654444333333

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.39  E-value=3.3e-12  Score=69.86  Aligned_cols=77  Identities=17%  Similarity=0.227  Sum_probs=56.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ...|++.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+...  .++....+...+..+.++++
T Consensus       184 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~  260 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIG-YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN--PPPTFRKPELWSDNFTDFVK  260 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSC-BCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCCCSSGGGSCHHHHHHHH
T ss_pred             ccCCCCCccChhhcCCCC-CCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--CCcccCCcccCCHHHHHHHH
Confidence            457899999999998776 888999999999999999999999888776665544433  22233334455555555554

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.39  E-value=1.5e-12  Score=71.94  Aligned_cols=70  Identities=19%  Similarity=0.192  Sum_probs=54.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~   76 (85)
                      .+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+......+.+..++.....
T Consensus       180 ~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  250 (327)
T 3lzb_A          180 KVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM  250 (327)
T ss_dssp             CCCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHH
T ss_pred             CccccccCHHHHcCCC-CChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHH
Confidence            4567899999998776 8899999999999999999 99999988877777666665544544444443333

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.39  E-value=2.9e-12  Score=69.57  Aligned_cols=80  Identities=19%  Similarity=0.219  Sum_probs=53.1

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH-hhcCCCCCCCcchhchhhhhh
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF-QTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ...||+.|+|||++..  ...++.+.|+|++|++++++++|..||.+.........+. .....+.....+...++.+.+
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  260 (289)
T 3og7_A          181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR  260 (289)
T ss_dssp             ---CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHH
T ss_pred             ccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHH
Confidence            3568999999999862  2237889999999999999999999998866555544443 333333334344445555555


Q ss_pred             hhh
Q psy13989         81 LIR   83 (85)
Q Consensus        81 ~~~   83 (85)
                      +++
T Consensus       261 li~  263 (289)
T 3og7_A          261 LMA  263 (289)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.38  E-value=1.5e-12  Score=70.35  Aligned_cols=70  Identities=24%  Similarity=0.351  Sum_probs=52.5

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~   76 (85)
                      .+++.|+|||++.... ++.+.|+|++|++++++++ |..||.+.........+......+.+...|.....
T Consensus       178 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~  248 (281)
T 1mp8_A          178 KLPIKWMAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS  248 (281)
T ss_dssp             -CCGGGCCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             CCcccccChhhcccCC-CCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            4567899999998766 8899999999999999996 99999988877777777655444444444433333

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.38  E-value=4.1e-12  Score=69.28  Aligned_cols=57  Identities=23%  Similarity=0.260  Sum_probs=48.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.........+...
T Consensus       178 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  234 (303)
T 3a7i_A          178 TFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN  234 (303)
T ss_dssp             CCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred             ccCCCcCccCHHHHhcCC-CCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcC
Confidence            457899999999998776 888999999999999999999999888877766665543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.38  E-value=1.1e-12  Score=72.97  Aligned_cols=63  Identities=27%  Similarity=0.616  Sum_probs=50.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      ..+||+.|+|||++.+...++...|+|++|++++++++|..||.+.+....+..+....+.+.
T Consensus       192 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  254 (362)
T 3pg1_A          192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK  254 (362)
T ss_dssp             ----CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             eecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            457889999999988744488999999999999999999999999998888888876655443

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.38  E-value=2.2e-12  Score=69.28  Aligned_cols=56  Identities=25%  Similarity=0.373  Sum_probs=46.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+..
T Consensus       173 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  228 (271)
T 3dtc_A          173 SAAGAYAWMAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM  228 (271)
T ss_dssp             ---CCGGGSCHHHHHHCC-CSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT
T ss_pred             CCCCccceeCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc
Confidence            456899999999998776 88999999999999999999999998887766655543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.37  E-value=3.9e-12  Score=70.38  Aligned_cols=74  Identities=18%  Similarity=0.275  Sum_probs=56.1

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      .+|..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+......+.+..++......+..
T Consensus       211 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  285 (333)
T 1mqb_A          211 KIPIRWTAPEAISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQ  285 (333)
T ss_dssp             CCCGGGSCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHH
T ss_pred             CccccccCchhcccCC-CCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHH
Confidence            3567899999998776 8899999999999999998 999999888877777776655555444455444443333

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.37  E-value=4.4e-12  Score=68.54  Aligned_cols=71  Identities=17%  Similarity=0.190  Sum_probs=55.1

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~   77 (85)
                      .+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+........+...+......
T Consensus       182 ~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  253 (283)
T 3gen_A          182 KFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTI  253 (283)
T ss_dssp             TSCGGGCCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ccCcccCCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHH
Confidence            4567899999998776 8899999999999999998 999999988888887777665544444444433333

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.37  E-value=2e-12  Score=71.03  Aligned_cols=71  Identities=17%  Similarity=0.177  Sum_probs=54.1

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~   77 (85)
                      .+++.|+|||++.+.. ++.++|+|++|++++++++ |..||.+.........+......+.+..++......
T Consensus       200 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  271 (323)
T 3qup_A          200 KLPVKWLALESLADNL-YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDL  271 (323)
T ss_dssp             -CCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             cCcccccCchhhcCCC-CCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHH
Confidence            4567899999998876 8899999999999999999 999999988877777776654444444444433333

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.37  E-value=5.7e-12  Score=68.60  Aligned_cols=58  Identities=26%  Similarity=0.314  Sum_probs=47.1

Q ss_pred             CccccccccCchhhhcccc--CCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARM--YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~--~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+||+.|+|||++.+...  ++.+.|+|++|++++++++|..||.+.........+...
T Consensus       196 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  255 (298)
T 2zv2_A          196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ  255 (298)
T ss_dssp             CCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             CCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcc
Confidence            4579999999999866431  467889999999999999999999988877666666543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.36  E-value=4.2e-12  Score=70.26  Aligned_cols=57  Identities=25%  Similarity=0.437  Sum_probs=48.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+||+.|++||++.+.. ++...|+|++|++++++++|..||.+.........+...
T Consensus       200 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  256 (335)
T 2owb_A          200 VLCGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN  256 (335)
T ss_dssp             CCCSCCSSCCHHHHHTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT
T ss_pred             ccCCCccccCHHHhccCC-CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC
Confidence            456899999999998776 888999999999999999999999988877776666543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.36  E-value=5.5e-12  Score=67.54  Aligned_cols=66  Identities=17%  Similarity=0.245  Sum_probs=51.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ..++..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+........+...+
T Consensus       165 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~  231 (267)
T 3t9t_A          165 TKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS  231 (267)
T ss_dssp             TTCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSC
T ss_pred             ccccccccChhhhcCCC-ccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCc
Confidence            45667899999998766 8899999999999999999 899999888877777776654433333333

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.36  E-value=2.4e-12  Score=72.33  Aligned_cols=75  Identities=15%  Similarity=0.225  Sum_probs=56.0

Q ss_pred             ccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          7 VRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         7 gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+......+.+..++......+...+
T Consensus       212 ~~~~y~aPE~~~~~~-~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  287 (373)
T 2qol_A          212 IPIRWTSPEAIAYRK-FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW  287 (373)
T ss_dssp             --CTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHT
T ss_pred             cCCCccChhhhccCC-cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHh
Confidence            456799999998776 8899999999999999987 99999998888887777766655655555555444444433

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.36  E-value=3.3e-12  Score=69.02  Aligned_cols=72  Identities=17%  Similarity=0.184  Sum_probs=53.3

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~   77 (85)
                      ..+++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+......+.+...+......
T Consensus       174 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  246 (281)
T 3cc6_A          174 TRLPIKWMSPESINFRR-FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTL  246 (281)
T ss_dssp             CCCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred             CCCCcceeCchhhccCC-CCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence            34677899999997766 8899999999999999998 999998877766666665554444444444433333

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.36  E-value=4.1e-12  Score=69.41  Aligned_cols=59  Identities=44%  Similarity=0.805  Sum_probs=46.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.........+....
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  219 (311)
T 4agu_A          161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL  219 (311)
T ss_dssp             -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            45789999999999875448899999999999999999999999998877776665543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.36  E-value=9.8e-13  Score=72.63  Aligned_cols=47  Identities=23%  Similarity=0.392  Sum_probs=25.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+
T Consensus       167 ~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~  213 (325)
T 3kn6_A          167 KTPCFTLHYAAPELLNQNG-YDESCDLWSLGVILYTMLSGQVPFQSHD  213 (325)
T ss_dssp             -----------------CC-CCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred             cccCCCcCccCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence            3457899999999998776 8999999999999999999999997654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.36  E-value=2.9e-12  Score=70.03  Aligned_cols=57  Identities=21%  Similarity=0.355  Sum_probs=47.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ..+++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+....
T Consensus       212 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  269 (314)
T 2ivs_A          212 GRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH  269 (314)
T ss_dssp             CCSCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred             CCCcccccChhhhcCCC-cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC
Confidence            45677899999998776 8899999999999999998 999999888777666665543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.36  E-value=5.5e-12  Score=69.20  Aligned_cols=68  Identities=19%  Similarity=0.267  Sum_probs=52.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTA   73 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~   73 (85)
                      ..+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+......+.+..++..
T Consensus       200 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (322)
T 1p4o_A          200 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM  268 (322)
T ss_dssp             SEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             CCCCCCccChhhhccCC-CCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHH
Confidence            45678899999988776 8899999999999999999 89999988877777666554333333333433

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.36  E-value=8.6e-13  Score=74.20  Aligned_cols=51  Identities=22%  Similarity=0.303  Sum_probs=42.9

Q ss_pred             ccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHH
Q psy13989          5 KKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL   55 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~   55 (85)
                      .+||+.|+|||++.+. ..++.++|+|++|++++++++|..||.+.+....+
T Consensus       195 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  246 (389)
T 3gni_B          195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML  246 (389)
T ss_dssp             CTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH
T ss_pred             ccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            4788999999999773 23889999999999999999999999887654444

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.35  E-value=3.5e-12  Score=70.10  Aligned_cols=57  Identities=25%  Similarity=0.276  Sum_probs=43.9

Q ss_pred             CccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++..    ...++.+.|+|++|++++++++|..||.+.+.......+..
T Consensus       188 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  248 (326)
T 2x7f_A          188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR  248 (326)
T ss_dssp             ---CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             cccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc
Confidence            4568999999999862    22377889999999999999999999998887777665544

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.35  E-value=2.9e-12  Score=70.02  Aligned_cols=57  Identities=35%  Similarity=0.702  Sum_probs=48.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+|..|+|||++.....++.+.|+|++|++++++++|..||.+.+....+..+...
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  240 (320)
T 2i6l_A          184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES  240 (320)
T ss_dssp             GGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             ccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            456888999999876444889999999999999999999999999888777777654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.35  E-value=4.3e-13  Score=72.69  Aligned_cols=46  Identities=11%  Similarity=0.039  Sum_probs=41.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+
T Consensus       174 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~  219 (296)
T 4hgt_A          174 NLTGTARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             CCCSCGGGCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             ccCCCccccchHHhcCCC-CCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence            457899999999998877 8899999999999999999999997753

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.35  E-value=2.5e-12  Score=71.99  Aligned_cols=60  Identities=27%  Similarity=0.393  Sum_probs=49.2

Q ss_pred             CCccccccccCchhhhcc-----ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          3 NWKKVRKAFMAPELLFGA-----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~-----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ...+||+.|+|||++.+.     ..++.++|+|++|++++++++|..||.+.+....+..+....
T Consensus       257 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~  321 (365)
T 2y7j_A          257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ  321 (365)
T ss_dssp             CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence            346799999999998632     237788999999999999999999999888877777776543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.35  E-value=3.2e-12  Score=74.06  Aligned_cols=72  Identities=18%  Similarity=0.264  Sum_probs=55.1

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      .++..|+|||++.... ++.+.|+|++|+++|++++ |..||.+.+.......+......+.+..+|......+
T Consensus       380 ~~~~~y~aPE~~~~~~-~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  452 (495)
T 1opk_A          380 KFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM  452 (495)
T ss_dssp             CCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             cCCcceeCHhHHhcCC-CCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            3567899999998776 8899999999999999998 9999999887777777766655544444444443333

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.35  E-value=3.8e-12  Score=70.10  Aligned_cols=69  Identities=16%  Similarity=0.173  Sum_probs=52.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      ..+++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+........+..++...
T Consensus       201 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l  270 (327)
T 1fvr_A          201 GRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEV  270 (327)
T ss_dssp             --CCTTTCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHH
T ss_pred             CCCCccccChhhhcccc-CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHH
Confidence            34677899999997776 8899999999999999998 999999988877777766554433333344333

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.34  E-value=6.5e-12  Score=68.23  Aligned_cols=57  Identities=25%  Similarity=0.437  Sum_probs=48.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+....+....+...
T Consensus       174 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  230 (294)
T 2rku_A          174 VLCGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN  230 (294)
T ss_dssp             CCCSCCSSCCHHHHTTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT
T ss_pred             cccCCCCcCCcchhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc
Confidence            356889999999987766 888999999999999999999999988877766665543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.34  E-value=6.7e-12  Score=67.70  Aligned_cols=68  Identities=18%  Similarity=0.330  Sum_probs=52.4

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      .++..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+........+...+...
T Consensus       171 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (279)
T 1qpc_A          171 KFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL  239 (279)
T ss_dssp             CCCTTTSCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             CCccCccChhhhccCC-CCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHH
Confidence            4567899999997766 8899999999999999998 899999888877777776554433333344333

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.34  E-value=6.6e-12  Score=69.38  Aligned_cols=67  Identities=19%  Similarity=0.346  Sum_probs=52.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      ..+++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+........+..++.
T Consensus       219 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (334)
T 2pvf_A          219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN  286 (334)
T ss_dssp             CCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCH
T ss_pred             CCcccceeChHHhcCCC-cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCH
Confidence            34667899999998776 8899999999999999998 9999998887777766665544333333333

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.34  E-value=5.4e-12  Score=67.72  Aligned_cols=66  Identities=17%  Similarity=0.198  Sum_probs=51.5

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcch
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPT   72 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~   72 (85)
                      .+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+........+...+.
T Consensus       166 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (268)
T 3sxs_A          166 KFPVKWSAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD  232 (268)
T ss_dssp             CCCGGGCCHHHHHHSE-EETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCH
T ss_pred             CcCcccCCHHHHhccC-CchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChH
Confidence            4566799999998776 8889999999999999998 9999998888877777766544443333333

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.34  E-value=3.7e-12  Score=68.76  Aligned_cols=57  Identities=32%  Similarity=0.418  Sum_probs=48.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...|++.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.......+...
T Consensus       170 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  226 (283)
T 3bhy_A          170 NIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV  226 (283)
T ss_dssp             --CCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT
T ss_pred             ccCCCcCccCcceecCCC-CCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhc
Confidence            346889999999987776 888999999999999999999999998887777666543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.34  E-value=8.5e-12  Score=67.89  Aligned_cols=78  Identities=18%  Similarity=0.261  Sum_probs=53.9

Q ss_pred             CccccccccCchhhh----ccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          4 WKKVRKAFMAPELLF----GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         4 ~~~gt~~~~ape~~~----~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ...||+.|+|||++.    ....++.+.|+|++|++++++++|..||.+.+.......+...  .++....+...+..+.
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~  253 (302)
T 2j7t_A          176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--DPPTLLTPSKWSVEFR  253 (302)
T ss_dssp             ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCCCSSGGGSCHHHH
T ss_pred             cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc--CCcccCCccccCHHHH
Confidence            457899999999984    2223788999999999999999999999988877776665543  2222223444455555


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      ++++
T Consensus       254 ~li~  257 (302)
T 2j7t_A          254 DFLK  257 (302)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.34  E-value=5e-13  Score=75.99  Aligned_cols=49  Identities=22%  Similarity=0.382  Sum_probs=35.9

Q ss_pred             CCccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          3 NWKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      +..+||+.|+|||++.+  ...++.++|+|++|++++++++|..||.+...
T Consensus       299 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~  349 (419)
T 3i6u_A          299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT  349 (419)
T ss_dssp             ------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred             cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence            35679999999999854  23377899999999999999999999976543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.34  E-value=5.8e-12  Score=75.16  Aligned_cols=71  Identities=24%  Similarity=0.341  Sum_probs=54.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~   76 (85)
                      ..+++.|+|||++.+.. ++.++|+|++|++++++++ |..||.+.+.......+......+.+..+|.....
T Consensus       552 ~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~  623 (656)
T 2j0j_A          552 GKLPIKWMAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS  623 (656)
T ss_dssp             --CCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHH
T ss_pred             CCCCcceeCHHHhcCCC-CCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHH
Confidence            34667899999998776 8899999999999999996 99999999888888887766544444444443333

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.33  E-value=4.6e-12  Score=68.78  Aligned_cols=57  Identities=16%  Similarity=0.214  Sum_probs=47.6

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcC
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      .+++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+.....
T Consensus       181 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~  238 (291)
T 1xbb_A          181 KWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER  238 (291)
T ss_dssp             CCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred             CCCceeeChHHhccCC-CChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC
Confidence            3567899999998776 8889999999999999998 9999999888777766655433

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.33  E-value=1e-11  Score=68.01  Aligned_cols=45  Identities=27%  Similarity=0.405  Sum_probs=38.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||...
T Consensus       162 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEGSN-YSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             ---CCTTSSCHHHHTCCC-CCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             cCCCCCceEChhhhCCCC-CCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence            346899999999998776 889999999999999999999999754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.33  E-value=6e-12  Score=69.47  Aligned_cols=60  Identities=42%  Similarity=0.890  Sum_probs=50.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.+....+..+....+
T Consensus       183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  242 (331)
T 4aaa_A          183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG  242 (331)
T ss_dssp             -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence            457899999999987764488899999999999999999999999988777777655433

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.33  E-value=2.2e-12  Score=70.64  Aligned_cols=51  Identities=22%  Similarity=0.240  Sum_probs=38.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL   55 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~   55 (85)
                      ...|++.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.+.....
T Consensus       194 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  244 (309)
T 2h34_A          194 NTVGTLYYMAPERFSESH-ATYRADIYALTCVLYECLTGSPPYQGDQLSVMG  244 (309)
T ss_dssp             ---CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHH
T ss_pred             ccCCCcCccCHHHHcCCC-CCchHhHHHHHHHHHHHHHCCCCCCCchHHHHH
Confidence            456889999999987766 788899999999999999999999877655333

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.33  E-value=2.7e-12  Score=72.18  Aligned_cols=71  Identities=23%  Similarity=0.345  Sum_probs=51.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~   76 (85)
                      ..+++.|+|||++.+.. ++.+.|+|++|+++|++++ |.+||.+.+.......+......+.+..+|.....
T Consensus       256 ~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~  327 (373)
T 3c1x_A          256 AKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE  327 (373)
T ss_dssp             --CCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             CCCcccccChHHhcCCC-CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            34667899999998776 8899999999999999999 78888877766666566555444444444443333

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.33  E-value=4.7e-12  Score=69.88  Aligned_cols=49  Identities=24%  Similarity=0.335  Sum_probs=42.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      +..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+...
T Consensus       165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  213 (323)
T 3tki_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  213 (323)
T ss_dssp             CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred             CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch
Confidence            3568999999999998766346789999999999999999999987654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.33  E-value=1.2e-12  Score=73.19  Aligned_cols=49  Identities=22%  Similarity=0.369  Sum_probs=34.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ...+||+.|+|||++.+.......+|+|++|++++++++|..||.+...
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  223 (361)
T 3uc3_A          175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE  223 (361)
T ss_dssp             ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----
T ss_pred             CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc
Confidence            3567999999999998876233448999999999999999999987543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.32  E-value=5.5e-12  Score=68.24  Aligned_cols=73  Identities=18%  Similarity=0.245  Sum_probs=54.6

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      .+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+........+..+|......+.
T Consensus       173 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  246 (288)
T 3kfa_A          173 KFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR  246 (288)
T ss_dssp             EECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             ccccCcCChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHH
Confidence            4567899999998776 8899999999999999999 99999888877776666665444444444444333333

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.32  E-value=6.9e-12  Score=69.70  Aligned_cols=54  Identities=26%  Similarity=0.494  Sum_probs=43.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI   58 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i   58 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+..........
T Consensus       254 ~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  308 (359)
T 3vhe_A          254 DARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  308 (359)
T ss_dssp             -CEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred             ccCCCceeEChhhhcCCC-CCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH
Confidence            356788899999998776 8899999999999999998 99999887644443333

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.32  E-value=9.4e-12  Score=69.32  Aligned_cols=51  Identities=25%  Similarity=0.455  Sum_probs=42.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQ   54 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~   54 (85)
                      +..+||+.|+|||++.+.. ++...|+|++|++++++++|..||.+.+....
T Consensus       188 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  238 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL  238 (360)
T ss_dssp             ---CCCCTTCCHHHHTTCC-CSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH
T ss_pred             cCCCCCCCeECHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            4567999999999998776 88999999999999999999999987665443

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.32  E-value=7.9e-12  Score=67.34  Aligned_cols=59  Identities=24%  Similarity=0.387  Sum_probs=49.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ...+||+.|+|||++.+.  ++.+.|+|++|++++++++|..||.+.........+.....
T Consensus       166 ~~~~~t~~y~aPE~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  224 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF  224 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTC--BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             hccCCCCCccChHHhccc--CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence            346789999999987653  78889999999999999999999999888877777766533

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.31  E-value=5e-12  Score=69.43  Aligned_cols=58  Identities=12%  Similarity=0.293  Sum_probs=44.1

Q ss_pred             CccccccccCchhhhc-------cccCCchhHHHhHHHHHHHHHHcCCCCCCCC----hHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFG-------ARMYGVGIDMWAVGCIICELLLKAPFLPGES----DLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~-------~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~----~~~~~~~i~~~   61 (85)
                      ..+||+.|+|||++..       ...++.++|+|++|++++++++|..||.+..    ....+..+...
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (319)
T 4euu_A          174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (319)
T ss_dssp             CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred             ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence            4578999999999862       2338889999999999999999999996433    34445555443

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.31  E-value=4.9e-13  Score=74.67  Aligned_cols=46  Identities=11%  Similarity=-0.010  Sum_probs=41.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+.
T Consensus       219 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          219 RCHDGTIEFTSIDAHNGVA-PSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             CCCCCCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             cccCCCCCccCHHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            3456999999999998877 899999999999999999999999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=1.5e-11  Score=66.73  Aligned_cols=74  Identities=22%  Similarity=0.277  Sum_probs=53.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      ...+++.|++||.+.+.. ++.+.|+|++|++++++++ +.++|.+.+.......+......+.+..++......+
T Consensus       187 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  261 (298)
T 3pls_A          187 HARLPVKWTALESLQTYR-FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVM  261 (298)
T ss_dssp             CTTCGGGGSCHHHHTTCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             CCCCCccccChhhhccCC-CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHH
Confidence            345778899999998776 8899999999999999999 5666776676666666665544444444444333333

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.31  E-value=2.2e-12  Score=74.67  Aligned_cols=46  Identities=11%  Similarity=0.050  Sum_probs=41.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..+||+.|++||++.+.. ++.+.|+|++|+++|++++|..||.+..
T Consensus       172 ~~~gt~~Y~aPE~~~~~~-~s~~sDvwSlGvil~elltG~~Pf~~~~  217 (483)
T 3sv0_A          172 NLTGTARYASVNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLK  217 (483)
T ss_dssp             CCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             ccCCCccccCHHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence            567999999999998877 8999999999999999999999998754

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.31  E-value=9.3e-12  Score=67.00  Aligned_cols=58  Identities=22%  Similarity=0.315  Sum_probs=41.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+|++.|+|||++.+....+.+.|+|++|++++++++|..||.+.........+...
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  226 (276)
T 2h6d_A          169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG  226 (276)
T ss_dssp             --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC
Confidence            3568899999999887653467899999999999999999999888777776666543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.30  E-value=7.6e-12  Score=68.01  Aligned_cols=71  Identities=23%  Similarity=0.345  Sum_probs=52.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~   76 (85)
                      ..+|+.|+|||++.+.. ++.+.|+|++|++++++++ +.+||.+.+.......+........+..+|.....
T Consensus       192 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  263 (298)
T 3f66_A          192 AKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE  263 (298)
T ss_dssp             CCBCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             CCCCccccChHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHH
Confidence            45677899999998776 8899999999999999999 67788877776666666665444444444443333

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.30  E-value=1e-11  Score=67.96  Aligned_cols=65  Identities=18%  Similarity=0.268  Sum_probs=50.2

Q ss_pred             cccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          6 KVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      .+++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+........+...+
T Consensus       210 ~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (313)
T 3brb_A          210 KMPVKWIAIESLADRV-YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCL  275 (313)
T ss_dssp             -CCGGGSCHHHHHSSC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCC
T ss_pred             CCCccccCchhhcCCC-ccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCcccc
Confidence            4567899999998776 8899999999999999999 889998888777766666554333333333

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.30  E-value=2.8e-11  Score=65.75  Aligned_cols=78  Identities=22%  Similarity=0.308  Sum_probs=55.6

Q ss_pred             CccccccccCchhhhc-----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          4 WKKVRKAFMAPELLFG-----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~-----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      ..+|++.|+|||++..     ...++.+.|+|++|++++++++|..||.+.+.......+.......+.+.+ ...+..+
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l  260 (298)
T 1phk_A          182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW-DDYSDTV  260 (298)
T ss_dssp             CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTG-GGSCHHH
T ss_pred             cccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccc-cccCHHH
Confidence            4568999999999852     223778999999999999999999999988887777777665433333322 2233444


Q ss_pred             hhhh
Q psy13989         79 FSLI   82 (85)
Q Consensus        79 ~~~~   82 (85)
                      .+++
T Consensus       261 ~~li  264 (298)
T 1phk_A          261 KDLV  264 (298)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4444

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.30  E-value=7.5e-12  Score=67.51  Aligned_cols=58  Identities=21%  Similarity=0.326  Sum_probs=46.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG   63 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~   63 (85)
                      ..+++.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+.....
T Consensus       174 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~  232 (278)
T 1byg_A          174 GKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK  232 (278)
T ss_dssp             --CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC
T ss_pred             CCccccccCHHHhCCCC-CCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC
Confidence            35678899999988766 8899999999999999998 9999988777666666655433

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.30  E-value=1.5e-11  Score=67.03  Aligned_cols=58  Identities=19%  Similarity=0.328  Sum_probs=47.7

Q ss_pred             CccccccccCchhhhccc-cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~-~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...||+.|++||++.+.. .++.+.|+|++|++++++++|..||.+.+.......+...
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~  228 (305)
T 2wtk_C          170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG  228 (305)
T ss_dssp             CCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC
T ss_pred             cCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC
Confidence            346899999999987643 2467899999999999999999999988877777766554

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.30  E-value=8.1e-12  Score=67.61  Aligned_cols=56  Identities=25%  Similarity=0.331  Sum_probs=46.6

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..+|..|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.+.......+...
T Consensus       184 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  240 (291)
T 1u46_A          184 RKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE  240 (291)
T ss_dssp             --CCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS
T ss_pred             CCCCceeeCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc
Confidence            34677899999998776 8889999999999999998 99999998887777666543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.29  E-value=4.6e-12  Score=70.47  Aligned_cols=47  Identities=13%  Similarity=0.029  Sum_probs=41.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      +...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+..
T Consensus       226 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          226 SPHEGDLEFISMDLHKGCG-PSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             CTTCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             ccccCCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            3457999999999998776 8899999999999999999999998764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.29  E-value=1e-11  Score=67.21  Aligned_cols=48  Identities=19%  Similarity=0.119  Sum_probs=39.9

Q ss_pred             CccccccccCchhhhc-cccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          4 WKKVRKAFMAPELLFG-ARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~-~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ...||+.|+|||++.. ...++.+.|+|++|++++++++|..||.+...
T Consensus       185 ~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  233 (287)
T 4f0f_A          185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY  233 (287)
T ss_dssp             CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc
Confidence            4578999999999843 22378899999999999999999999977653

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.29  E-value=6.3e-12  Score=69.56  Aligned_cols=55  Identities=25%  Similarity=0.495  Sum_probs=44.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..||+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+..
T Consensus       234 ~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  289 (344)
T 1rjb_A          234 ARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ  289 (344)
T ss_dssp             EEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             ccCccCccCHHHhccCC-CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHh
Confidence            45677899999988776 8899999999999999997 9999988765444444433

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.28  E-value=2e-11  Score=66.22  Aligned_cols=56  Identities=20%  Similarity=0.245  Sum_probs=45.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~   60 (85)
                      ...+||+.|+|||++.. . ++.+.|+|++|++++++++|..||.+.+.......+..
T Consensus       184 ~~~~~t~~y~aPE~~~~-~-~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~  239 (285)
T 3is5_A          184 TNAAGTALYMAPEVFKR-D-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY  239 (285)
T ss_dssp             ---CTTGGGCCHHHHTT-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cCcccccCcCChHHhcc-C-CCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc
Confidence            34578999999998754 3 78899999999999999999999998887766655544

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.28  E-value=2.5e-11  Score=65.82  Aligned_cols=76  Identities=17%  Similarity=0.236  Sum_probs=51.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..+||+.|+|||++.+ . ++.+.|+|++|++++++++|..||.+.............  ...+...+...+.++.++++
T Consensus       189 ~~~~t~~y~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~  264 (290)
T 1t4h_A          189 AVIGTPEFMAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS--GVKPASFDKVAIPEVKEIIE  264 (290)
T ss_dssp             ESCSSCCCCCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT--TCCCGGGGGCCCHHHHHHHH
T ss_pred             cccCCcCcCCHHHHhc-c-CCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc--cCCccccCCCCCHHHHHHHH
Confidence            4568999999998764 3 788999999999999999999999885554443332222  12223344444455555554

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.27  E-value=1.5e-11  Score=70.26  Aligned_cols=49  Identities=22%  Similarity=0.305  Sum_probs=37.8

Q ss_pred             CccccccccCchhhhc------cccCCchhHHHhHHHHHHHHHH-cCCCCCCCChH
Q psy13989          4 WKKVRKAFMAPELLFG------ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDL   52 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~------~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~   52 (85)
                      ..+||+.|+|||++.+      ...++.++|+|++|++++++++ |..||.+....
T Consensus       191 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~  246 (434)
T 2rio_A          191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR  246 (434)
T ss_dssp             ----CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred             CCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence            4579999999999865      1238889999999999999998 89999765543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.27  E-value=4.6e-11  Score=65.44  Aligned_cols=57  Identities=16%  Similarity=0.140  Sum_probs=46.9

Q ss_pred             ccccccccCchhhhc--------cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          5 KKVRKAFMAPELLFG--------ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         5 ~~gt~~~~ape~~~~--------~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ..|++.|+|||++..        ...++.+.|+|++|++++++++|..||.+.........+...
T Consensus       194 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  258 (319)
T 2y4i_B          194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG  258 (319)
T ss_dssp             CSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT
T ss_pred             CCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC
Confidence            458899999999864        223788999999999999999999999988877776666554

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.27  E-value=9.3e-12  Score=69.13  Aligned_cols=45  Identities=11%  Similarity=-0.018  Sum_probs=40.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ...+||+.|+|||++.+.. ++.++|+|++|++++++++|..||.+
T Consensus       218 ~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          218 KGHNGTIEFTSLDAHKGVA-LSRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             GCSCSCTTTCCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             cccCCCccccCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCccc
Confidence            3457999999999998876 89999999999999999999999965

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.27  E-value=2.6e-11  Score=66.27  Aligned_cols=49  Identities=27%  Similarity=0.554  Sum_probs=41.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQ   54 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~   54 (85)
                      ..||+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+......
T Consensus       210 ~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~  259 (316)
T 2xir_A          210 ARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE  259 (316)
T ss_dssp             EEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred             CCcceeecCchhhcccc-ccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence            45678899999998776 8899999999999999998 9999987664333

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.27  E-value=6.7e-12  Score=68.72  Aligned_cols=46  Identities=28%  Similarity=0.463  Sum_probs=38.5

Q ss_pred             CccccccccCchhhhc-----cccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFG-----ARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~-----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..+||+.|+|||++..     .. ++.+.|+|++|++++++++|..||.+..
T Consensus       180 ~~~gt~~y~aPE~~~~~~~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~  230 (316)
T 2ac3_A          180 TPCGSAEYMAPEVVEAFSEEASI-YDKRCDLWSLGVILYILLSGYPPFVGRC  230 (316)
T ss_dssp             --CCSGGGCCHHHHHHTSHHHHH-HTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             cccCCcCccChHHhhcccccccC-CCcccccHhHHHHHHHHHHCCCCCcccc
Confidence            3468999999999864     33 7788999999999999999999998764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.26  E-value=3.6e-11  Score=66.16  Aligned_cols=57  Identities=32%  Similarity=0.674  Sum_probs=44.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC-CChHHHHHHHH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG-ESDLDQLTRIF   59 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~-~~~~~~~~~i~   59 (85)
                      ...+|++.|+|||++.+...++.+.|+|++|++++++++|..||.. ......+..+.
T Consensus       188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~  245 (330)
T 3nsz_A          188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA  245 (330)
T ss_dssp             CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Confidence            3457899999999987744488999999999999999999988843 44444444433

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.25  E-value=3.2e-11  Score=65.86  Aligned_cols=54  Identities=24%  Similarity=0.496  Sum_probs=43.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~   59 (85)
                      ..+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+.
T Consensus       207 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  261 (313)
T 1t46_A          207 ARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (313)
T ss_dssp             SEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             CCCcceeeChHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence            45677899999988776 8899999999999999998 999998876544444433

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.25  E-value=3e-11  Score=66.16  Aligned_cols=47  Identities=17%  Similarity=0.290  Sum_probs=37.7

Q ss_pred             CccccccccCchhhhcc----------ccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGA----------RMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~----------~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..+||+.|+|||++.+.          ..++.+.|+|++|++++++++|..||.+..
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             ---CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            45689999999998651          237889999999999999999999997754

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.25  E-value=1.5e-11  Score=66.89  Aligned_cols=56  Identities=23%  Similarity=0.265  Sum_probs=43.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF   59 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~   59 (85)
                      ...||+.|+|||++.....++.+.|+|++|++++++++|..||.+...........
T Consensus       185 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  240 (303)
T 2vwi_A          185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL  240 (303)
T ss_dssp             ---CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH
T ss_pred             ccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHh
Confidence            45789999999998763337889999999999999999999998877655554443

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=6.7e-11  Score=66.04  Aligned_cols=46  Identities=24%  Similarity=0.376  Sum_probs=38.0

Q ss_pred             CccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..+||+.|+|||++.+. ..++.+.|+|++|++++++++|..||...
T Consensus       219 ~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~  265 (355)
T 1vzo_A          219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  265 (355)
T ss_dssp             GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             CcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence            45799999999998753 23778899999999999999999999754

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.24  E-value=3.9e-11  Score=64.91  Aligned_cols=56  Identities=25%  Similarity=0.409  Sum_probs=41.5

Q ss_pred             ccccccccCchhhh---ccccCCchhHHHhHHHHHHHHHHcCCCCCCC-ChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLF---GARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~---~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~-~~~~~~~~i~~   60 (85)
                      ..||+.|+|||++.   ....++.+.|+|++|++++++++|..||.+. .....+.....
T Consensus       169 ~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  228 (290)
T 3fme_A          169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE  228 (290)
T ss_dssp             -CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH
T ss_pred             cCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc
Confidence            46899999999972   3333888999999999999999999999763 34444444433

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.24  E-value=3.2e-11  Score=65.35  Aligned_cols=56  Identities=30%  Similarity=0.526  Sum_probs=47.5

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL   62 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   62 (85)
                      ..|++.|+|||++.+.  ++.+.|+|++|++++++++|..||.+.+.......+....
T Consensus       183 ~~~~~~y~aPE~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  238 (287)
T 2wei_A          183 RIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK  238 (287)
T ss_dssp             HHHHHTTCCHHHHTTC--CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred             ccCcccccChHHhcCC--CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence            4578899999988653  7889999999999999999999999988887777776543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.24  E-value=4.5e-11  Score=64.28  Aligned_cols=49  Identities=24%  Similarity=0.335  Sum_probs=41.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      +..+|++.|+|||++.+...++.+.|+|++|++++++++|..||.+...
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  213 (276)
T 2yex_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  213 (276)
T ss_dssp             CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT
T ss_pred             cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch
Confidence            3457899999999987765346789999999999999999999987654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.24  E-value=3.3e-11  Score=68.94  Aligned_cols=48  Identities=15%  Similarity=0.253  Sum_probs=38.0

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHH-cCCCCCCCCh
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLL-KAPFLPGESD   51 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~   51 (85)
                      ..+||+.|+|||++..  ...++.++|+|++|++++++++ |..||.....
T Consensus       185 ~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~  235 (432)
T 3p23_A          185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ  235 (432)
T ss_dssp             -CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT
T ss_pred             ccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH
Confidence            4679999999999874  2226678999999999999999 8888865443

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.23  E-value=7.9e-12  Score=68.74  Aligned_cols=47  Identities=23%  Similarity=0.421  Sum_probs=39.0

Q ss_pred             ccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          5 KKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         5 ~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      .+||+.|+|||++..  ...++.+.|+|++|++++++++|..||.+...
T Consensus       176 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  224 (322)
T 2ycf_A          176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT  224 (322)
T ss_dssp             HHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred             ccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence            468999999999742  23378899999999999999999999976543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.23  E-value=1.1e-11  Score=69.16  Aligned_cols=45  Identities=18%  Similarity=0.205  Sum_probs=40.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      +..+||+.|+|||++.+.. ++.++|+|++|+++|++++|..||..
T Consensus       243 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          243 TAKCETSGFQCVEMLSNKP-WNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             CCSSCTTSCCCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             eeecCCCCCCChHHhcCCC-CCccccHHHHHHHHHHHHhCCCcccc
Confidence            3567999999999998877 89999999999999999999988743

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.23  E-value=2.9e-12  Score=69.08  Aligned_cols=53  Identities=21%  Similarity=0.477  Sum_probs=24.4

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR   57 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~   57 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+......+..
T Consensus       171 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  223 (278)
T 3cok_A          171 TLCGTPNYISPEIATRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK  223 (278)
T ss_dssp             ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----
T ss_pred             eccCCCCcCCcchhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH
Confidence            356889999999987766 78889999999999999999999987665444433

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.22  E-value=4e-11  Score=66.12  Aligned_cols=55  Identities=24%  Similarity=0.478  Sum_probs=44.4

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ   60 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~   60 (85)
                      ..+|+.|+|||++.+.. ++.+.|+|++|++++++++ |..||.+.........+..
T Consensus       226 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  281 (333)
T 2i1m_A          226 ARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK  281 (333)
T ss_dssp             CEECGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH
T ss_pred             CCCCccccCHHHhccCC-CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh
Confidence            45677899999988776 8899999999999999998 8999988765554444443

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.22  E-value=5.7e-11  Score=65.79  Aligned_cols=58  Identities=16%  Similarity=0.327  Sum_probs=46.6

Q ss_pred             CccccccccCchhhhccccCCc-hhHHHhHHHHHHHHHHcCCCCCCCCh-HHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGV-GIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~-~~~~ws~g~~~~~~~~~~~~~~~~~~-~~~~~~i~~~   61 (85)
                      ...|++.|+|||++.+...++. +.|+|++|++++++++|..||.+... ......+...
T Consensus       209 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~  268 (348)
T 2pml_X          209 GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK  268 (348)
T ss_dssp             SSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred             CCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence            4578999999999887633655 89999999999999999999988776 5666555443

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.22  E-value=1.6e-11  Score=69.32  Aligned_cols=57  Identities=14%  Similarity=0.317  Sum_probs=43.5

Q ss_pred             CccccccccCchhhhcc-------ccCCchhHHHhHHHHHHHHHHcCCCCCCC----ChHHHHHHHHh
Q psy13989          4 WKKVRKAFMAPELLFGA-------RMYGVGIDMWAVGCIICELLLKAPFLPGE----SDLDQLTRIFQ   60 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-------~~~~~~~~~ws~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~   60 (85)
                      ..+||+.|+|||++.+.       ..++.++|+|++|+++|++++|..||.+.    .....+..+..
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~  241 (396)
T 4eut_A          174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (396)
T ss_dssp             CSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred             cccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence            56799999999998641       23778899999999999999999999643    23455555544

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.20  E-value=3.6e-12  Score=71.53  Aligned_cols=46  Identities=20%  Similarity=0.277  Sum_probs=37.3

Q ss_pred             CccccccccCchhhhcc-----------ccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          4 WKKVRKAFMAPELLFGA-----------RMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-----------~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ..+| +.|+|||++.+.           . ++.++|+|++|++++++++|..||.+.+.
T Consensus       262 ~~~g-~~y~aPE~~~~~~~~~~~~~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~  318 (377)
T 3byv_A          262 SSVS-RGFEPPELEARRATISYHRDRRTL-MTFSFDAWALGLVIYWIWCADLPITKDAA  318 (377)
T ss_dssp             CCCC-TTCCCHHHHHHHTSTHHHHCCEEE-CCHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             CCCC-cCccChhhhccccccccccccccc-CChhhhHHHHHHHHHHHHHCCCCCccccc
Confidence            4567 899999999876           5 89999999999999999999999976553

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.20  E-value=8.9e-11  Score=64.23  Aligned_cols=58  Identities=26%  Similarity=0.382  Sum_probs=40.9

Q ss_pred             CccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCC-ChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~-~~~~~~~~i~~~   61 (85)
                      ...||+.|+|||++..    ...++.+.|+|++|++++++++|..||.+. .....+..+...
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  245 (318)
T 2dyl_A          183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE  245 (318)
T ss_dssp             ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS
T ss_pred             ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc
Confidence            3468999999999852    223778999999999999999999999874 444555555443

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.20  E-value=2.5e-11  Score=66.56  Aligned_cols=43  Identities=33%  Similarity=0.555  Sum_probs=36.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..+||+.|+|||++.+ . ++.++|+|++|++++++++|..++.+
T Consensus       215 ~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~el~~g~~~~~~  257 (311)
T 3p1a_A          215 VQEGDPRYMAPELLQG-S-YGTAADVFSLGLTILEVACNMELPHG  257 (311)
T ss_dssp             CCCCCGGGCCGGGGGT-C-CSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred             ccCCCccccCHhHhcC-C-CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            4568999999999876 4 88899999999999999999776654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.20  E-value=4.5e-11  Score=65.76  Aligned_cols=48  Identities=23%  Similarity=0.478  Sum_probs=24.3

Q ss_pred             CccccccccCchhhh---ccccCCchhHHHhHHHHHHHHHHcCCCCCCCChH
Q psy13989          4 WKKVRKAFMAPELLF---GARMYGVGIDMWAVGCIICELLLKAPFLPGESDL   52 (85)
Q Consensus         4 ~~~gt~~~~ape~~~---~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~   52 (85)
                      ..+||+.|+|||++.   +.. ++.+.|+|++|++++++++|..||.+....
T Consensus       209 ~~~~t~~y~aPE~~~~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~  259 (337)
T 3ll6_A          209 TRNTTPMYRTPEIIDLYSNFP-IGEKQDIWALGCILYLLCFRQHPFEDGAKL  259 (337)
T ss_dssp             ---------------CCTTSC-SSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred             cccCCCCcCChhhhhccccCC-CChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence            456899999999983   333 788999999999999999999999765543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.18  E-value=4.9e-11  Score=65.71  Aligned_cols=46  Identities=35%  Similarity=0.465  Sum_probs=38.3

Q ss_pred             CccccccccCchhhhcc----ccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~----~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..+||+.|+|||++.+.    ..++.++|+|++|+++|++++|..||.+.
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             TCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             cCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence            35789999999998763    22556789999999999999999999764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.18  E-value=1.4e-11  Score=67.68  Aligned_cols=46  Identities=17%  Similarity=0.291  Sum_probs=40.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+..
T Consensus       200 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~p~~~~~  245 (321)
T 2qkw_B          200 VVKGTLGYIDPEYFIKGR-LTEKSDVYSFGVVLFEVLCARSAIVQSL  245 (321)
T ss_dssp             CCEEETTTCCHHHHHHCB-CCTHHHHHHHHHHHHHHHHCCTTCSCSS
T ss_pred             ccCCCccccCHHHhcCCC-CCcccchHhHHHHHHHHHhCCCcccccC
Confidence            356899999999998776 8899999999999999999999997654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.17  E-value=1.7e-11  Score=67.97  Aligned_cols=48  Identities=27%  Similarity=0.415  Sum_probs=24.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL   52 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~   52 (85)
                      ..+||+.|+|||++.... ++.+.|+|++|++++++++|..||.+....
T Consensus       188 ~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~  235 (336)
T 3fhr_A          188 TPCYTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQ  235 (336)
T ss_dssp             ----------------CH-HHHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred             cCCCCcCccChhhhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCccch
Confidence            456899999999987766 888999999999999999999999776543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.17  E-value=1e-10  Score=63.59  Aligned_cols=43  Identities=23%  Similarity=0.420  Sum_probs=37.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..++..|+|||++.+.. ++.+.|+|++|++++++++|..|+..
T Consensus       177 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          177 GESPIFWYAPESLTESK-FSVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             TTCGGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             CCCccceeCcHHhcCCC-CChHHHHHHHHHHHHHHHhcccccCC
Confidence            34667799999998776 89999999999999999999887754

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.17  E-value=9.9e-11  Score=63.63  Aligned_cols=46  Identities=26%  Similarity=0.345  Sum_probs=37.7

Q ss_pred             CccccccccCchhhhccc-----cCCchhHHHhHHHHHHHHHHc----------CCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGAR-----MYGVGIDMWAVGCIICELLLK----------APFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~-----~~~~~~~~ws~g~~~~~~~~~----------~~~~~~~   49 (85)
                      ..+||+.|+|||++.+..     .++.+.|+|++|+++|++++|          ..||.+.
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~  236 (301)
T 3q4u_A          176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV  236 (301)
T ss_dssp             CCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             ccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence            457999999999987652     144689999999999999999          7888653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.16  E-value=7.7e-11  Score=63.93  Aligned_cols=38  Identities=29%  Similarity=0.463  Sum_probs=29.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL   41 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~   41 (85)
                      ..+||+.|+|||++.+...++.+.|+|++|++++++++
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  226 (303)
T 1zy4_A          189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY  226 (303)
T ss_dssp             -----CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred             cCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence            45688999999998765448899999999999999996

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.16  E-value=8.6e-11  Score=63.59  Aligned_cols=52  Identities=17%  Similarity=0.306  Sum_probs=40.2

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHH
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLT   56 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~   56 (85)
                      ..||+.|+|||++.+...++.+.|+|++|++++++++ +.+++..........
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~  229 (289)
T 4fvq_A          177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ  229 (289)
T ss_dssp             HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred             cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH
Confidence            3578889999999874448899999999999999999 456665555544443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.16  E-value=1e-11  Score=70.53  Aligned_cols=48  Identities=15%  Similarity=0.176  Sum_probs=39.3

Q ss_pred             CCccccccccCchhhh---------ccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          3 NWKKVRKAFMAPELLF---------GARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~---------~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      +..+| +.|+|||++.         ....++.++|+|++|+++|++++|..||.+.+.
T Consensus       266 ~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~  322 (413)
T 3dzo_A          266 VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA  322 (413)
T ss_dssp             CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred             ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            34577 8999999983         222377899999999999999999999987654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.16  E-value=2.4e-10  Score=62.50  Aligned_cols=46  Identities=22%  Similarity=0.481  Sum_probs=36.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...|++.|+|||++.+.. ++.+.|+|++|++++++++|..||.+..
T Consensus       195 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~  240 (310)
T 2wqm_A          195 SLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDK  240 (310)
T ss_dssp             ----CCSSCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred             ccCCCeeEeChHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            356889999999988776 8899999999999999999999997653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.16  E-value=9e-11  Score=63.62  Aligned_cols=47  Identities=30%  Similarity=0.506  Sum_probs=39.4

Q ss_pred             CccccccccCchhhhcc-ccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~-~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...|++.|+|||++.+. ..++.+.|+|++|++++++++|..||.+..
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  229 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG  229 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGS
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCC
Confidence            45789999999998653 237789999999999999999999997654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.15  E-value=9.8e-11  Score=64.96  Aligned_cols=45  Identities=22%  Similarity=0.408  Sum_probs=39.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..+||+.|+|||++.+...++.+.|+|++|++++++++|..||.+
T Consensus       188 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  232 (335)
T 3dls_A          188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE  232 (335)
T ss_dssp             EECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             ccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence            457899999999998776347889999999999999999999965

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.15  E-value=1.5e-11  Score=67.69  Aligned_cols=45  Identities=27%  Similarity=0.390  Sum_probs=25.1

Q ss_pred             ccccccccCchhhh----ccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          5 KKVRKAFMAPELLF----GARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         5 ~~gt~~~~ape~~~----~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ..||+.|+|||++.    +.. ++.+.|+|++|++++++++|..||.+..
T Consensus       185 ~~gt~~y~aPE~~~~~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~  233 (327)
T 3aln_A          185 DAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGRFPYPKWN  233 (327)
T ss_dssp             ----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred             CCCCccccCceeeccccCcCC-CCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence            46899999999983    333 7889999999999999999999997654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.14  E-value=6.9e-11  Score=65.12  Aligned_cols=45  Identities=20%  Similarity=0.256  Sum_probs=38.6

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ...||..|+|||++.+.. ++.+.|+|++|++++++++|..||.+.
T Consensus       189 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~  233 (327)
T 3lxl_A          189 PGQSPIFWYAPESLSDNI-FSRQSDVWSFGVVLYELFTYCDKSCSP  233 (327)
T ss_dssp             CCCSCGGGSCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             cCCccccccCHHHhccCC-CChHHhHHHHHHHHHHHHhCCCCCccc
Confidence            345778899999998776 889999999999999999998888543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.11  E-value=3.8e-10  Score=60.81  Aligned_cols=46  Identities=15%  Similarity=0.091  Sum_probs=37.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ...||+.|+|||++.+...++.+.|+|++|+++++++++.+++...
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~  234 (289)
T 1x8b_A          189 VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG  234 (289)
T ss_dssp             CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS
T ss_pred             ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch
Confidence            3468999999999977644667899999999999999888766543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.10  E-value=8.8e-11  Score=64.65  Aligned_cols=46  Identities=13%  Similarity=0.269  Sum_probs=39.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ...||+.|+|||++.+...++.+.|+|++|++++++++|..||.+.
T Consensus       207 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  252 (320)
T 3a99_A          207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  252 (320)
T ss_dssp             CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh
Confidence            4578999999999877663467889999999999999999999653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.08  E-value=1.4e-10  Score=63.77  Aligned_cols=44  Identities=23%  Similarity=0.296  Sum_probs=37.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ...+|..|+|||++.+.. ++.+.|+|++|++++++++|..||..
T Consensus       196 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          196 DGDSPVFWYAPECLKEYK-FYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             -CCCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             CCCCCceeeChHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCcccc
Confidence            345777899999998776 88899999999999999999988864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.08  E-value=1.3e-10  Score=65.15  Aligned_cols=46  Identities=15%  Similarity=0.187  Sum_probs=39.9

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...+|+.|+|||++.+  .. ++.++|+|++|++++++++|..||.+..
T Consensus       250 ~~~~t~~y~aPE~~~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~  297 (371)
T 3q60_A          250 ASSVPVTYAPREFLNASTAT-FTHALNAWQLGLSIYRVWCLFLPFGLVT  297 (371)
T ss_dssp             GGGSCGGGCCHHHHTCSEEE-CCHHHHHHHHHHHHHHHHHSSCSTTBCC
T ss_pred             CccCCcCCcChhhccCCCCC-cCccccHHHHHHHHHHHHhCCCCCCCcC
Confidence            3456799999999976  44 8999999999999999999999998763

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.05  E-value=2.8e-10  Score=62.28  Aligned_cols=45  Identities=24%  Similarity=0.479  Sum_probs=39.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..|+...
T Consensus       181 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          181 TVVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             CCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             ccCCCcceeCHHHhcCCC-CCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence            567999999999998876 889999999999999999998887653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.05  E-value=2.8e-10  Score=62.71  Aligned_cols=45  Identities=22%  Similarity=0.208  Sum_probs=36.3

Q ss_pred             CccccccccCchhhhccccCCc------hhHHHhHHHHHHHHHHc----------CCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGV------GIDMWAVGCIICELLLK----------APFLPGE   49 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~------~~~~ws~g~~~~~~~~~----------~~~~~~~   49 (85)
                      ..+||+.|+|||++.+.. ...      ++|+|++|+++|++++|          ..||...
T Consensus       205 ~~~gt~~y~aPE~~~~~~-~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~  265 (337)
T 3mdy_A          205 TRVGTKRYMPPEVLDESL-NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL  265 (337)
T ss_dssp             SSCSCGGGCCHHHHTTCC-CTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCccCcceeChhhccccc-CCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence            567999999999987654 333      38999999999999999          6677543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.04  E-value=4.9e-10  Score=61.53  Aligned_cols=42  Identities=29%  Similarity=0.498  Sum_probs=35.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFL   46 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~   46 (85)
                      ..+||+.|+|||++.+.. ++.+.|+|++|++++++++|..++
T Consensus       235 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          235 GQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             SCC-CGGGSCHHHHHCCC-CCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             ccCCCcCccChHHhcCCC-CcchhhHHHHHHHHHHHHHcCCCh
Confidence            457999999999998876 889999999999999999876544

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.03  E-value=8.5e-10  Score=60.92  Aligned_cols=47  Identities=23%  Similarity=0.218  Sum_probs=37.5

Q ss_pred             CCccccccccCchhhhcccc-----CCchhHHHhHHHHHHHHHHc----------CCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARM-----YGVGIDMWAVGCIICELLLK----------APFLPGE   49 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~-----~~~~~~~ws~g~~~~~~~~~----------~~~~~~~   49 (85)
                      ...+||+.|+|||++.+...     ++.+.|+|++|++++++++|          ..||.+.
T Consensus       209 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~  270 (342)
T 1b6c_B          209 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  270 (342)
T ss_dssp             CSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             ccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence            34578999999999876521     23678999999999999998          7788664

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.03  E-value=1.7e-10  Score=63.16  Aligned_cols=43  Identities=19%  Similarity=0.461  Sum_probs=36.1

Q ss_pred             cccccccCchhhhccc--cCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          6 KVRKAFMAPELLFGAR--MYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         6 ~gt~~~~ape~~~~~~--~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      .||+.|+|||++....  .++.+.|+|++|++++++++|..||.+
T Consensus       204 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  248 (317)
T 2buj_A          204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM  248 (317)
T ss_dssp             HSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred             cCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence            4688999999986532  267899999999999999999999853

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.02  E-value=4.1e-10  Score=61.26  Aligned_cols=42  Identities=24%  Similarity=0.393  Sum_probs=36.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFL   46 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~   46 (85)
                      ...||..|+|||++.+.. ++.+.|+|++|++++++++|..|+
T Consensus       188 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~  229 (302)
T 4e5w_A          188 DRDSPVFWYAPECLMQSK-FYIASDVWSFGVTLHELLTYCDSD  229 (302)
T ss_dssp             CTTCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred             CCCCCccccCCeeecCCC-CCcchhHHHHHHHHHHHHHccCCC
Confidence            345777899999998776 888999999999999999987764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.02  E-value=3.4e-10  Score=61.93  Aligned_cols=45  Identities=9%  Similarity=0.230  Sum_probs=38.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ...|++.|+|||++.+....+.+.|+|++|++++++++|..||.+
T Consensus       197 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  241 (312)
T 2iwi_A          197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER  241 (312)
T ss_dssp             CCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             ccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence            456899999999987665345589999999999999999999965

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.01  E-value=1.4e-10  Score=63.22  Aligned_cols=45  Identities=24%  Similarity=0.381  Sum_probs=38.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...||+.|+|||++.+.  ++.+.|+|++|++++++++|..||.+..
T Consensus       194 ~~~g~~~y~aPE~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~  238 (307)
T 2nru_A          194 RIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEIITGLPAVDEHR  238 (307)
T ss_dssp             SCCSCGGGCCHHHHTTE--ECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred             ccCCCcCcCChHHhcCC--CCccchhHHHHHHHHHHHHCCCCcccCc
Confidence            45789999999987653  6788999999999999999999997654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.00  E-value=2.7e-10  Score=62.63  Aligned_cols=43  Identities=19%  Similarity=0.250  Sum_probs=38.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP   47 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~   47 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.
T Consensus       194 ~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          194 AVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CCCSCGGGCCHHHHHHSE-ECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             cccCCcCccCHHHhccCC-CCccccchhHHHHHHHHHhCCCccc
Confidence            345899999999998776 8899999999999999999999994

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.98  E-value=2.5e-09  Score=57.61  Aligned_cols=43  Identities=30%  Similarity=0.461  Sum_probs=37.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCC
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP   47 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~   47 (85)
                      ...||+.|+|||++.+.. ++.+.|+|++|++++++++|..++.
T Consensus       180 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          180 RSKGTLRYMSPEQISSQD-YGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             CCCSCCTTSCHHHHHCSC-CCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             ccCCcccccChhhhccCC-CcchhhhHHHHHHHHHHHhcCCcch
Confidence            456899999999998776 8899999999999999999877764

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.97  E-value=8.6e-10  Score=66.24  Aligned_cols=47  Identities=23%  Similarity=0.305  Sum_probs=41.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...+||+.|+|||++.+.. ++.+.|+|++|++++++++|..||.+..
T Consensus       181 ~~~~gt~~Y~APE~l~~~~-~s~ksDIwSLGviLyeLltG~~Pf~~~~  227 (676)
T 3qa8_A          181 TEFVGTLQYLAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFLPNW  227 (676)
T ss_dssp             CCCCSCCTTCSSCSSCCSC-CSTTHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred             ccccCCcccCChHHhccCC-CCchhHHHHHHHHHHHHHHCCCCCCccc
Confidence            3467899999999987776 8899999999999999999999997653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.96  E-value=1.1e-09  Score=60.34  Aligned_cols=43  Identities=23%  Similarity=0.420  Sum_probs=36.7

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      ..++..|+|||++.+.. ++.+.|+|++|++++++++|..|+..
T Consensus       208 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          208 GESPIFWYAPESLTESK-FSVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             CSCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             CCCceeEECchhhcCCC-CCchhhHHHHHHHHHHHHhcCCCCCC
Confidence            34667799999998776 88899999999999999999887753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.91  E-value=3.6e-10  Score=62.35  Aligned_cols=43  Identities=33%  Similarity=0.430  Sum_probs=34.8

Q ss_pred             CccccccccCchhhhcc------ccCCchhHHHhHHHHHHHHHHcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGA------RMYGVGIDMWAVGCIICELLLKAPFL   46 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~------~~~~~~~~~ws~g~~~~~~~~~~~~~   46 (85)
                      ..+||+.|+|||++.+.      ..++.++|+|++|+++|++++|..|+
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~  235 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL  235 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence            45799999999998762      22567899999999999999985544

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.59  E-value=3e-08  Score=59.56  Aligned_cols=44  Identities=27%  Similarity=0.406  Sum_probs=37.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG   48 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~   48 (85)
                      +..+||+.|++||++.+.  .+.++|+|++|++++++++|..++.+
T Consensus       235 ~~~~gt~~y~aPE~~~~~--~~~~sDi~slG~~l~~l~~g~~~~~~  278 (681)
T 2pzi_A          235 GYLYGTPGFQAPEIVRTG--PTVATDIYTVGRTLAALTLDLPTRNG  278 (681)
T ss_dssp             SCCCCCTTTSCTTHHHHC--SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred             CccCCCccccCHHHHcCC--CCCceehhhhHHHHHHHHhCCCCCcc
Confidence            346799999999998654  47889999999999999999887754

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.58  E-value=1.1e-08  Score=56.56  Aligned_cols=79  Identities=8%  Similarity=-0.064  Sum_probs=46.8

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHH-HHHHHHcCCCCCCCCh-HHHHHHHHhhcC--CCCCCCcchhchhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCI-ICELLLKAPFLPGESD-LDQLTRIFQTLG--TPSEDTWPTAGVKGLF   79 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~-~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~~~~p~~~~~~~~   79 (85)
                      ..+||+.|+|||++.+..  +..+|+|+++.. .+++..|..||.+... ......+.....  ..+....+...++++.
T Consensus       236 ~~~gt~~y~aPE~~~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  313 (336)
T 2vuw_A          236 IVVFCDVSMDEDLFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQ  313 (336)
T ss_dssp             EEECCCCTTCSGGGCCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHH
T ss_pred             cEEEeecccChhhhcCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHH
Confidence            357999999999987654  778999997655 5556667777743211 112223332211  1222223445677777


Q ss_pred             hhhhc
Q psy13989         80 SLIRA   84 (85)
Q Consensus        80 ~~~~~   84 (85)
                      +||++
T Consensus       314 dli~~  318 (336)
T 2vuw_A          314 EFHRT  318 (336)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77753

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.21  E-value=6.8e-07  Score=48.75  Aligned_cols=29  Identities=31%  Similarity=0.559  Sum_probs=24.5

Q ss_pred             CCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989         23 YGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus        23 ~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ++.++|+|++|++++++++|..||.+...
T Consensus       175 ~~~~~DiwslG~il~el~tg~~pf~~~~~  203 (299)
T 3m2w_A          175 YDKSCDMWSLGVIMYILLCGYPPFYSNHG  203 (299)
T ss_dssp             GGGHHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence            78899999999999999999999976554

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.14  E-value=1e-07  Score=51.91  Aligned_cols=29  Identities=21%  Similarity=0.208  Sum_probs=26.2

Q ss_pred             CCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989         23 YGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus        23 ~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      ++.+.|+|++|+++|++++|..||.+.+.
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~  207 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGV  207 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence            67889999999999999999999987654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=95.97  E-value=0.00069  Score=40.24  Aligned_cols=42  Identities=10%  Similarity=-0.050  Sum_probs=33.1

Q ss_pred             CccccccccCchhhhc--cccCCchhHHHhHHHHHHHHHHcCCCC
Q psy13989          4 WKKVRKAFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFL   46 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~--~~~~~~~~~~ws~g~~~~~~~~~~~~~   46 (85)
                      +++||+.|+|||++..  .. |+...|.|+..+-..+.......|
T Consensus       495 ~~~GT~~y~APEv~~~~~~~-Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          495 AVLSTHHEKFDEIWERFLEG-YKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHCGGGHHHHHHHHHHH-HHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhcCCCCcCCHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHhcccc
Confidence            5789999999999876  44 777788999888777777665555

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=95.90  E-value=8.9e-05  Score=44.20  Aligned_cols=35  Identities=9%  Similarity=-0.222  Sum_probs=14.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICEL   39 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~   39 (85)
                      ++.+||+.|++||++.+.  +....|+|+.|+..+.+
T Consensus       397 ~t~vGTp~YmAPE~l~g~--~~~~~d~~s~g~~~~~l  431 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAEN--KSWNGFWRSAPVHPFNL  431 (569)
T ss_dssp             HHHHHHHHHHHHHHC-------------------CCC
T ss_pred             cCceechhhccHHHhCCC--CCCcccccccccchhhh
Confidence            356899999999998764  45568999998875543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	85
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-15
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	8e-14
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-12
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-12
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-11
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-09
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-08
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-08
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	8e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-07
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-06
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-06
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-06
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-06
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-05
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	0.002
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	0.002
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	0.002
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	0.002
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	0.003
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.003
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	0.003
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.003

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 4e-17
 Identities = 49/61 (80%), Positives = 57/61 (93%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ W
Sbjct: 166 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 225

Query: 71  P 71
           P
Sbjct: 226 P 226

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 2e-15
 Identities = 30/71 (42%), Positives = 45/71 (63%)

Query: 1   MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
               + V   + APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217

Query: 61  TLGTPSEDTWP 71
           TLGTP E  WP
Sbjct: 218 TLGTPDEVVWP 228

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 63.8 bits (154), Expect = 2e-14
 Identities = 29/61 (47%), Positives = 41/61 (67%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + AP++L G++ Y   ID+W+VGCI  E++   P  PG S+ DQL RIF+ LGTP+   W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225

Query: 71  P 71
           P
Sbjct: 226 P 226

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 8e-14
 Identities = 29/61 (47%), Positives = 40/61 (65%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +  
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247

Query: 71  P 71
            
Sbjct: 248 R 248

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (149), Expect = 1e-13
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 1   MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIF 59
             + + V   +  P++LFGA++Y   IDMW+ GCI  EL     P  PG    DQL RIF
Sbjct: 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216

Query: 60  QTLGTPSEDTWPT 72
           + LGTP+E+ WP+
Sbjct: 217 RLLGTPTEEQWPS 229

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 2e-13
 Identities = 25/74 (33%), Positives = 39/74 (52%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
            +  PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + 
Sbjct: 186 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245

Query: 70  WPTAGVKGLFSLIR 83
           WP      L+  + 
Sbjct: 246 WPNVDNYELYEKLE 259

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 1e-12
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ W
Sbjct: 181 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239

Query: 71  P 71
           P
Sbjct: 240 P 240

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 3e-12
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           + APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  +  
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243

Query: 71  P 71
            
Sbjct: 244 K 244

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 1e-11
 Identities = 25/71 (35%), Positives = 39/71 (54%)

Query: 1   MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
                   + + APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I  
Sbjct: 168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 227

Query: 61  TLGTPSEDTWP 71
            LG+PS++   
Sbjct: 228 ILGSPSQEDLN 238

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 55.9 bits (134), Expect = 2e-11
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           F APE+  G +  G   DMW+VG +   LL       GE+D + L  +        +  +
Sbjct: 191 FAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 249

Query: 71  P 71
            
Sbjct: 250 S 250

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 55.5 bits (133), Expect = 2e-11
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 1   MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
           +         F APE++      G   DMWA+G +   LL       GE DL+ L  + +
Sbjct: 184 IVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR 242

Query: 61  TLGTPSEDTWPT 72
                 ED + +
Sbjct: 243 CDWEFDEDAFSS 254

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 54.8 bits (131), Expect = 4e-11
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           F  PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT     
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 254

Query: 70  WP 71
           + 
Sbjct: 255 YI 256

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-10
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 9   KAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE 67
           +++M+PE L G   Y V  D+W++G  + E+ + + P  P ++   +L    Q  G  +E
Sbjct: 167 RSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 2e-10
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
            + APE++     Y   +D+W+VGCI+ E++       G   LDQL  I +  GTP  + 
Sbjct: 183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242

Query: 70  WP 71
             
Sbjct: 243 VQ 244

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 3e-10
 Identities = 13/58 (22%), Positives = 24/58 (41%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 68
           ++APELL     +   +D+W+ G ++  +L         SD  Q    ++   T    
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP 228

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 7e-10
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 3   NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 62
                   F+APE++      G+  DMW++G I   LL  A    G++  + L  +    
Sbjct: 174 KNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 232

Query: 63  GTPSEDTWP 71
               ++ + 
Sbjct: 233 YEFEDEYFS 241

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.4 bits (120), Expect = 1e-09
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
            ++APE+L   + Y   +D W++G I   LL   P    E+D     +I +         
Sbjct: 174 GYVAPEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPY 232

Query: 70  WP 71
           W 
Sbjct: 233 WD 234

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 2e-09
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +++PELL   +      D+WA+GCII +L+   P     ++     +I +      E  +
Sbjct: 176 YVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 234

Query: 71  PTA 73
           P A
Sbjct: 235 PKA 237

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.4 bits (117), Expect = 3e-09
 Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +++PE   G        D++++GC++ E+L   P   G+S +    +  +    P     
Sbjct: 180 YLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 238

Query: 71  P 71
            
Sbjct: 239 E 239

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 5e-09
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           ++ PE++ G RM+   +D+W++G +  E L+  P     +  +   RI +   T  +   
Sbjct: 170 YLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 228

Query: 71  PTA 73
             A
Sbjct: 229 EGA 231

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 7e-09
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 1   MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
           M     V + + APE++ G       +D+W+VGCI+ E++      PG   +DQ  ++ +
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232

Query: 61  TLGTPSEDTWP 71
            LGTP  +   
Sbjct: 233 QLGTPCPEFMK 243

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 1e-08
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
            + APE+     +     DMW++G ++  LL        E++   +  I     T  E+ 
Sbjct: 168 EYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA 226

Query: 70  WP 71
           + 
Sbjct: 227 FK 228

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 47.0 bits (111), Expect = 2e-08
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 5/66 (7%)

Query: 11  FMAPELLFGARM-----YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 65
           ++APE++  +       YG  +DMW+ G I+  LL  +P       +  L  I       
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 234

Query: 66  SEDTWP 71
               W 
Sbjct: 235 GSPEWD 240

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 2e-08
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
           +MAPE++   + YG  +D+W++G +  E++   P    E+ L  L  I    GTP     
Sbjct: 182 WMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPELQNP 239

Query: 71  P 71
            
Sbjct: 240 E 240

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 8e-08
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
           +M+PE +     Y    D+W++GC++ EL    P     S  +   +I +
Sbjct: 180 YMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 228

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.0 bits (105), Expect = 1e-07
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 7/77 (9%)

Query: 1   MQNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------DLDQ 54
                   + + +PE+L GA  +G G D+W+  C+I EL+        +       D D 
Sbjct: 185 HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 243

Query: 55  LTRIFQTLGTPSEDTWP 71
           + +I + LG        
Sbjct: 244 IAQIIELLGELPSYLLR 260

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 43.6 bits (102), Expect = 3e-07
 Identities = 8/51 (15%), Positives = 16/51 (31%), Gaps = 1/51 (1%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
            +M+     G R      D+ A+G +    L  +    G        +  +
Sbjct: 178 RYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER 227

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 3e-07
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 6/77 (7%)

Query: 11  FMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 66
           +MAPE++       R Y    D+W++G  + E+    P     + +  L +I +    P 
Sbjct: 176 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK--SEPP 233

Query: 67  EDTWPTAGVKGLFSLIR 83
               P+         ++
Sbjct: 234 TLAQPSRWSSNFKDFLK 250

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.7 bits (100), Expect = 7e-07
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 10  AFMAPELLFGARM--YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
            +MAPE++       Y   +D+W++G    EL  + P L   + +  L  I Q
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 1e-06
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 1   MQNWKKVRKAFMAPELLFGARM-YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF 59
                     +MAP+++ G    +   +D W++G ++ ELL  A     + + +    I 
Sbjct: 186 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 245

Query: 60  QTLGTPSEDTWP 71
           + +         
Sbjct: 246 RRILKSEPPYPQ 257

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 1e-06
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 58
           ++APE+L G + Y   +D W+ G ++ E+L+      G+ + +    I
Sbjct: 169 YIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 215

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 1e-06
 Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
            FMAPE+      Y   +D++A G  + E+           +  Q+ R   +   P+   
Sbjct: 178 EFMAPEMYEEK--YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS-- 233

Query: 70  WPTAGVKGLFSLIR 83
           +    +  +  +I 
Sbjct: 234 FDKVAIPEVKEIIE 247

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 2e-06
 Identities = 7/49 (14%), Positives = 22/49 (44%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF 59
           +  PE +   R +G    +W++G ++ +++        + ++ +    F
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF 223

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (96), Expect = 2e-06
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
            ++APE++   + Y   ID W+ G +I E+L         + +    +I           
Sbjct: 166 DYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFF 224

Query: 70  WPTA 73
               
Sbjct: 225 NEDV 228

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 3e-06
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           + APE L   + +    D+W+ G ++ E+        P     D + R+ +     + D 
Sbjct: 166 WTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 224

Query: 70  WP 71
            P
Sbjct: 225 CP 226

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 6e-06
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           + APE     R + +  D+W+ G ++ EL        PG  + + L ++ +    P    
Sbjct: 180 WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 238

Query: 70  WP 71
            P
Sbjct: 239 CP 240

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 6e-06
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
           ++APE+L     Y    DMW++G I+  LL   P       L     +  
Sbjct: 179 YVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 227

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.1 bits (90), Expect = 1e-05
 Identities = 8/65 (12%), Positives = 20/65 (30%), Gaps = 5/65 (7%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT----LGTPS 66
           + +     G        D+ ++G ++    L +    G     +  +  +     + TP 
Sbjct: 179 YASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 237

Query: 67  EDTWP 71
           E    
Sbjct: 238 EVLCK 242

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.0 bits (90), Expect = 1e-05
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 70
            +APE++   + Y   +D WA+G +I E+    P    +  +    +I            
Sbjct: 204 ALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFS 262

Query: 71  PTA 73
              
Sbjct: 263 SDL 265

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 2e-05
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 10  AFMAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF-QTLGTPS 66
            +MAPE++       Y    D++A G ++ EL+         ++ DQ+  +  +   +P 
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD 230

Query: 67  EDTWPTAGVKGLFSLIR 83
                +   K +  L+ 
Sbjct: 231 LSKVRSNCPKAMKRLMA 247

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 3e-05
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSED 68
            +MA E L   +      D+W+ G ++ EL+   AP  P  +  D    + Q       +
Sbjct: 199 KWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 257

Query: 69  TWP 71
             P
Sbjct: 258 YCP 260

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.0 bits (85), Expect = 7e-05
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 67
           +MAPE+L     Y    D +++GC++ +LL            D+      TL    E
Sbjct: 171 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 227

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 2e-04
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE +   + +    D+W+ G ++ E     + P+  G    +    + +        
Sbjct: 176 WYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPY-RGMKGSEVTAMLEKGERMGCPA 233

Query: 69  TWP 71
             P
Sbjct: 234 GCP 236

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 3e-04
 Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPSED 68
           +  PE+L  ++ +    D+WA G ++ E+    K P+    ++ +    I Q L      
Sbjct: 167 WSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPY-ERFTNSETAEHIAQGLRLYRPH 224

Query: 69  TWP 71
              
Sbjct: 225 LAS 227

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 4e-04
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           + +PE+   +R Y    D+W+ G ++ E+           S+ + +  I           
Sbjct: 168 WASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 226

Query: 70  WPT 72
             T
Sbjct: 227 AST 229

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (75), Expect = 0.002
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 10  AFMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQ 60
           A+ APE L   R +    D W  G  + E+    + P+  G +    L +I +
Sbjct: 179 AWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDK 229

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (74), Expect = 0.002
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           + APE +   +      D+W+ G ++ E++          S+ + +  I      P+   
Sbjct: 179 WTAPEAISYRKFTS-ASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMD 237

Query: 70  WPTA 73
            P+A
Sbjct: 238 CPSA 241

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 32.9 bits (74), Expect = 0.002
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           +M PE +F    Y    D+WA G ++ E+         G +  + +  +         + 
Sbjct: 208 WMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266

Query: 70  WP 71
            P
Sbjct: 267 CP 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 0.002
 Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDT 69
           + APE +       +  D+W+ G ++ E++       PG ++ + +  + +       D 
Sbjct: 176 WTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234

Query: 70  WP 71
            P
Sbjct: 235 CP 236

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (74), Expect = 0.003
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
           ++APE+L     YG  +D W +G ++ E++        +        I  
Sbjct: 171 YLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (73), Expect = 0.003
 Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 6/76 (7%)

Query: 9   KAFMAPELLFGARMYGVG-----IDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 63
           K +MAPE+L  +            D++A+G +  E+  +     G  +  QL        
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI-GGIHEDYQLPYYDLVPS 234

Query: 64  TPSEDTWPTAGVKGLF 79
            PS +       +   
Sbjct: 235 DPSVEEMRKVVCEQKL 250

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.4 bits (73), Expect = 0.003
 Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIFQTLGTPSED 68
           + APE +   R +    D+W+ G ++ E++   + P+    ++ D +  I Q    P   
Sbjct: 199 WTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPY-WDMTNQDVINAIEQDYRLPPPM 256

Query: 69  TWPTA 73
             P+A
Sbjct: 257 DCPSA 261

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (73), Expect = 0.003
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 11  FMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 60
           +MAPE LF  R+Y    D+W+ G ++ E+            +++L ++ +
Sbjct: 203 WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 251

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	85
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.8
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.79
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.78
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.77
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.77
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.76
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.76
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.76
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.75
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.75
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.74
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.74
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.72
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.71
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.7
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.7
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.7
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.7
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.69
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.69
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.69
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.68
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.68
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.67
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.67
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.67
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.65
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.65
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.64
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.63
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.63
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.61
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.61
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.6
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.6
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.6
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.59
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.59
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.59
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.58
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.58
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.58
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.57
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.57
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.57
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.56
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.56
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.55
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.54
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.54
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.54
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.52
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.5
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.5
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.48
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.47
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.42
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.4
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.33
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.32
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.29
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.05

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1e-19  Score=97.97  Aligned_cols=76  Identities=22%  Similarity=0.338  Sum_probs=61.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++.+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+....+.+|....     ..+|...++++.+||
T Consensus       168 ~~~~GT~~Y~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~~li  241 (288)
T d1uu3a_         168 NSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE-----YDFPEKFFPKARDLV  241 (288)
T ss_dssp             --CCCCGGGCCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC-----CCCCTTCCHHHHHHH
T ss_pred             ccccCCccccCceeeccCC-CCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCC-----CCCCccCCHHHHHHH
Confidence            4568999999999998877 8999999999999999999999999999888888887642     234555667777776


Q ss_pred             hc
Q psy13989         83 RA   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus       242 ~~  243 (288)
T d1uu3a_         242 EK  243 (288)
T ss_dssp             HT
T ss_pred             HH
Confidence            53

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.3e-19  Score=98.32  Aligned_cols=75  Identities=19%  Similarity=0.275  Sum_probs=62.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.+||+.|+|||++.+.. |+.++|+||+||++|++++|..||.+.+.......+....     ..+|...+.++.+||
T Consensus       163 ~~~~GT~~Y~aPE~~~~~~-y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~dli  236 (337)
T d1o6la_         163 KTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE-----IRFPRTLSPEAKSLL  236 (337)
T ss_dssp             CCCEECGGGCCGGGGSSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----CCCCTTSCHHHHHHH
T ss_pred             ccceeCHHHhhhhhccCCC-CChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCC-----CCCCccCCHHHHHHH
Confidence            4689999999999998887 8999999999999999999999999999888887776642     234555666677766


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       237 ~  237 (337)
T d1o6la_         237 A  237 (337)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.9e-19  Score=94.67  Aligned_cols=75  Identities=21%  Similarity=0.350  Sum_probs=60.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+....+..+....     ..+|...++++.+|+
T Consensus       162 ~~~~Gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~~li  235 (263)
T d2j4za1         162 TTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE-----FTFPDFVTEGARDLI  235 (263)
T ss_dssp             EETTEEGGGCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC-----CCCCTTSCHHHHHHH
T ss_pred             cccCCCCcccCHHHHcCCC-CCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----CCCCccCCHHHHHHH
Confidence            3568999999999998876 8999999999999999999999999999888887776542     224445566666665


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       236 ~  236 (263)
T d2j4za1         236 S  236 (263)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.4e-18  Score=93.71  Aligned_cols=78  Identities=22%  Similarity=0.274  Sum_probs=63.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+....+..+....  .+....+...+.++.+||
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li  250 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSAIFRDFL  250 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC--SCCCSSGGGSCHHHHHHH
T ss_pred             cccccCCCccChhhhcCCC-CCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCC--CCCCCCcccCCHHHHHHH
Confidence            4668999999999998876 8999999999999999999999999999888877776542  223344566677777776


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       251 ~  251 (293)
T d1yhwa1         251 N  251 (293)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.4e-18  Score=92.73  Aligned_cols=76  Identities=21%  Similarity=0.267  Sum_probs=57.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ++.+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+..+....+......+    .|...++++.+++
T Consensus       172 ~~~~gt~~Y~APE~l~~~~-~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~----~~~~~s~~l~~li  246 (269)
T d2java1         172 KAFVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR----IPYRYSDELNEII  246 (269)
T ss_dssp             ----CCCSCCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC----CCTTSCHHHHHHH
T ss_pred             ccCCCCcccCCHHHHcCCC-CChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC----CCcccCHHHHHHH
Confidence            4578999999999998776 8999999999999999999999999999888887776653332    3344455555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       247 ~  247 (269)
T d2java1         247 T  247 (269)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.3e-18  Score=93.90  Aligned_cols=67  Identities=37%  Similarity=0.830  Sum_probs=58.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      ...+||+.|+|||++.+.. ++.++|+||+||++|++++|..||.+.+....+.++....+.+....+
T Consensus       173 ~~~~gT~~Y~APE~~~~~~-y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  239 (305)
T d1blxa_         173 TSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  239 (305)
T ss_dssp             CCCCCCCTTCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             CCcccChhhcCcchhcCCC-CChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcc
Confidence            4678999999999998877 999999999999999999999999999999999888877666555444

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=1.3e-18  Score=94.64  Aligned_cols=58  Identities=21%  Similarity=0.362  Sum_probs=52.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ++.+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+....+.++...
T Consensus       159 ~~~~Gt~~Y~APE~l~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~  216 (316)
T d1fota_         159 YTLCGTPDYIAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA  216 (316)
T ss_dssp             CCCCSCTTTCCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC
T ss_pred             ccccCcccccCHHHHcCCC-CCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC
Confidence            4678999999999998877 889999999999999999999999999998888888765

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=1.8e-18  Score=93.74  Aligned_cols=79  Identities=22%  Similarity=0.278  Sum_probs=57.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+.......+......++.+ .+...++++.+||
T Consensus       167 ~~~~GT~~y~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li  244 (307)
T d1a06a_         167 STACGTPGYVAPEVLAQKP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP-YWDDISDSAKDFI  244 (307)
T ss_dssp             ------CTTSCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTT-TTTTSCHHHHHHH
T ss_pred             eeeeeCccccCcHHHcCCC-CCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCc-cccCCCHHHHHHH
Confidence            4578999999999998876 8999999999999999999999999999888888887654433333 2334555666665


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       245 ~  245 (307)
T d1a06a_         245 R  245 (307)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=2.1e-18  Score=94.94  Aligned_cols=58  Identities=21%  Similarity=0.362  Sum_probs=52.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~   61 (85)
                      .+.+||+.|+|||++.+.. ++.++|+||+||++|++++|..||.+.+....+.+|...
T Consensus       196 ~~~~Gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~  253 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG  253 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             ccccCccccCCHHHHcCCC-CCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC
Confidence            4678999999999998877 899999999999999999999999999988888888765

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.5e-18  Score=93.64  Aligned_cols=75  Identities=23%  Similarity=0.413  Sum_probs=61.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      +..+||+.|+|||++.+.. ++.++|+||+||++|++++|..||.+.+....+.++...     .+.+|...++++.+||
T Consensus       161 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-----~~~~p~~~s~~~~dli  234 (320)
T d1xjda_         161 NTFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD-----NPFYPRWLEKEAKDLL  234 (320)
T ss_dssp             CCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----CCCCCTTSCHHHHHHH
T ss_pred             cccCCCCCcCCHHHHcCCC-CCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----CCCCCccCCHHHHHHH
Confidence            4568999999999998877 899999999999999999999999999988888877654     1234555666677766


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       235 ~  235 (320)
T d1xjda_         235 V  235 (320)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6.1e-18  Score=91.21  Aligned_cols=69  Identities=72%  Similarity=1.363  Sum_probs=60.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      .+.+||+.|+|||++.....++.++|+||+|++++++++|..||.+.+..+++.+|....+.|....++
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~  226 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP  226 (299)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred             cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhcc
Confidence            356899999999998776558999999999999999999999999999999999998887777665544

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5e-18  Score=91.36  Aligned_cols=79  Identities=19%  Similarity=0.297  Sum_probs=62.5

Q ss_pred             CCccccccccCchhhhc----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          3 NWKKVRKAFMAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      ++.+||+.|+|||++..    ...|+.++|+||+|+++|++++|..||.+.+..+.+..+...  .++....+...+.++
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~  245 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EPPTLAQPSRWSSNF  245 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS--CCCCCSSGGGSCHHH
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCccccCCHHH
Confidence            46789999999999852    223788999999999999999999999999988888777654  334444566677777


Q ss_pred             hhhhh
Q psy13989         79 FSLIR   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      .+||+
T Consensus       246 ~~li~  250 (288)
T d2jfla1         246 KDFLK  250 (288)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77765

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.72  E-value=6e-18  Score=90.44  Aligned_cols=79  Identities=16%  Similarity=0.262  Sum_probs=55.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+..+.+.++......++. ......++++.++|
T Consensus       172 ~~~~Gt~~Y~aPE~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~l~~li  249 (277)
T d1o6ya_         172 AAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS-ARHEGLSADLDAVV  249 (277)
T ss_dssp             -------TTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGG-GTSSSCCHHHHHHH
T ss_pred             ccccCcccccCHHHHcCCC-CCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCc-hhccCCCHHHHHHH
Confidence            4568999999999998776 899999999999999999999999999988887777665333222 22334445555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       250 ~  250 (277)
T d1o6ya_         250 L  250 (277)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.71  E-value=1.3e-17  Score=91.69  Aligned_cols=78  Identities=24%  Similarity=0.232  Sum_probs=62.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      +.+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+..+.+..|......++.. .....++++.+||+
T Consensus       184 ~~~gT~~Y~aPEv~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~  261 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS-AFSGISEDGKDFIR  261 (350)
T ss_dssp             EECSCTTTCCHHHHHTCC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCG-GGGGCCHHHHHHHH
T ss_pred             eecCcccccCHHHHcCCC-CChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcc-cccCCCHHHHHHHH
Confidence            468999999999998877 8999999999999999999999999999988888887654443332 23345566666665

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.1e-17  Score=88.24  Aligned_cols=50  Identities=24%  Similarity=0.314  Sum_probs=43.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL   52 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~   52 (85)
                      ++.+||+.|+|||++.+...++.++|+||+|+++|++++|..||.+....
T Consensus       163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~  212 (271)
T d1nvra_         163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS  212 (271)
T ss_dssp             CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTT
T ss_pred             cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChH
Confidence            56789999999999988763467899999999999999999999776543

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.7e-17  Score=87.28  Aligned_cols=76  Identities=17%  Similarity=0.243  Sum_probs=55.9

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHH-HHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQ-LTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ++.+||+.|+|||++.+ . ++.++|+||+|+++|++++|..||.+...... ...+...   ..+..++...++++.++
T Consensus       171 ~~~~GT~~Y~aPE~~~~-~-~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~l  245 (270)
T d1t4ha_         171 KAVIGTPEFMAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG---VKPASFDKVAIPEVKEI  245 (270)
T ss_dssp             EESCSSCCCCCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT---CCCGGGGGCCCHHHHHH
T ss_pred             CCcccCccccCHHHhCC-C-CCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcC---CCCcccCccCCHHHHHH
Confidence            45689999999998864 4 88999999999999999999999987654444 3444332   22334555566667776


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      ++
T Consensus       246 i~  247 (270)
T d1t4ha_         246 IE  247 (270)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=5.4e-17  Score=88.02  Aligned_cols=78  Identities=21%  Similarity=0.240  Sum_probs=58.5

Q ss_pred             CCccccccccCchhhhcc--ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~--~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ...+||+.|+|||++.+.  ..|+.++|+||+|+++|++++|..||.+.+....+.++......+.   .+...+.++.+
T Consensus       169 ~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~s~~~~~  245 (309)
T d1u5ra_         169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRN  245 (309)
T ss_dssp             CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC---SCTTSCHHHHH
T ss_pred             CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC---CCCCCCHHHHH
Confidence            467899999999998642  2388899999999999999999999999988888877766432221   22334555555


Q ss_pred             hhh
Q psy13989         81 LIR   83 (85)
Q Consensus        81 ~~~   83 (85)
                      ||+
T Consensus       246 li~  248 (309)
T d1u5ra_         246 FVD  248 (309)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.8e-17  Score=88.48  Aligned_cols=80  Identities=23%  Similarity=0.264  Sum_probs=62.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      .+.+||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+.+....+..+.+....++ ...+...+.++.+||
T Consensus       174 ~~~~~t~~y~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li  251 (293)
T d1jksa_         174 KNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE-DEYFSNTSALAKDFI  251 (293)
T ss_dssp             SCCCCCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC-HHHHTTSCHHHHHHH
T ss_pred             cccCCCCcccCHHHHcCCC-CCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC-chhcCCCCHHHHHHH
Confidence            4567999999999998876 89999999999999999999999999999888888766533222 223344566667766


Q ss_pred             hc
Q psy13989         83 RA   84 (85)
Q Consensus        83 ~~   84 (85)
                      ++
T Consensus       252 ~~  253 (293)
T d1jksa_         252 RR  253 (293)
T ss_dssp             HT
T ss_pred             HH
Confidence            53

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.69  E-value=2.3e-17  Score=91.17  Aligned_cols=79  Identities=23%  Similarity=0.266  Sum_probs=56.0

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...+||+.|+|||++.....++.++|+||+||++|++++|..||.+.+............  ..+...|...++++.+||
T Consensus       163 ~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li  240 (364)
T d1omwa3         163 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--TMAVELPDSFSPELRSLL  240 (364)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSS--SCCCCCCSSSCHHHHHHH
T ss_pred             cccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--cCCCCCCCCCCHHHHHHH
Confidence            457899999999999755448999999999999999999999998765433332222221  222334555666666666


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       241 ~  241 (364)
T d1omwa3         241 E  241 (364)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.69  E-value=5.3e-17  Score=89.36  Aligned_cols=79  Identities=25%  Similarity=0.288  Sum_probs=63.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      +.+||+.|+|||++.+.. ++.++|+||+||++|++++|..||.+.+....+..+......++.. .....++++.+||+
T Consensus       187 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~  264 (352)
T d1koba_         187 VTTATAEFAAPEIVDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDED-AFSSVSPEAKDFIK  264 (352)
T ss_dssp             EECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSS-TTTTSCHHHHHHHH
T ss_pred             eccCcccccCHHHHcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcc-cccCCCHHHHHHHH
Confidence            467999999999998877 9999999999999999999999999999988888887654443333 33445566666665


Q ss_pred             c
Q psy13989         84 A   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus       265 ~  265 (352)
T d1koba_         265 N  265 (352)
T ss_dssp             T
T ss_pred             H
Confidence            3

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.6e-17  Score=88.00  Aligned_cols=49  Identities=27%  Similarity=0.478  Sum_probs=42.2

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCCh
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD   51 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~   51 (85)
                      .++++||+.|+|||++.+.. |+.++|+||+||+++++++|..||.+.+.
T Consensus       160 ~~~~~GT~~Y~APEvl~~~~-y~~~~DiWSlGvil~ell~G~~Pf~~~~~  208 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDA  208 (322)
T ss_dssp             C---CCSSCCCCHHHHHCSC-CCTTHHHHHHHHHHHHHHHSSCCSSCCCT
T ss_pred             cccccCCccccCchHHcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence            45789999999999999877 99999999999999999999999987653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.7e-17  Score=86.38  Aligned_cols=71  Identities=17%  Similarity=0.134  Sum_probs=57.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      +..+||+.|+|||++.... ++.++|+||+|+++|++++ |..||.+.+..+....+..+.+.+.+..+|...
T Consensus       170 ~~~~gt~~y~aPE~~~~~~-~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l  241 (285)
T d1u59a_         170 SAGKWPLKWYAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPEL  241 (285)
T ss_dssp             CSSCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             cccccCccccChHHHhCCC-CCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHH
Confidence            3457889999999998777 8999999999999999997 899999988888888777665554444444433

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=9.8e-17  Score=85.83  Aligned_cols=81  Identities=19%  Similarity=0.215  Sum_probs=58.4

Q ss_pred             CCccccccccCchhhhcc--ccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHH-hhcCCCCCCCcchhchhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF-QTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~--~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ++.+||+.|+|||++...  ..++.++|+||+|+++|++++|..||.+.+....+..+. .....|.....+...++++.
T Consensus       164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~  243 (276)
T d1uwha_         164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK  243 (276)
T ss_dssp             --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHH
T ss_pred             cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHH
Confidence            356799999999998642  237889999999999999999999999877665554444 44444444445555666666


Q ss_pred             hhhh
Q psy13989         80 SLIR   83 (85)
Q Consensus        80 ~~~~   83 (85)
                      +++.
T Consensus       244 ~li~  247 (276)
T d1uwha_         244 RLMA  247 (276)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=7.6e-17  Score=86.28  Aligned_cols=70  Identities=14%  Similarity=0.160  Sum_probs=55.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      ...||+.|+|||++.+.. ++.++|+||+|+++|++++ |..||.+.+..+....+.++...+.+..+|...
T Consensus       169 ~~~gt~~y~APE~l~~~~-~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~  239 (277)
T d1xbba_         169 HGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREM  239 (277)
T ss_dssp             --CCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             ccCCCceecCchhhcCCC-CCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHH
Confidence            356889999999998877 8899999999999999997 899999998888877776665444444444433

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.8e-16  Score=85.18  Aligned_cols=68  Identities=35%  Similarity=0.738  Sum_probs=58.1

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      .+.+||+.|+|||++.+...++.++|+||+|++++++++|..||.+.+.......+....+.+++..+
T Consensus       179 ~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  246 (318)
T d3blha1         179 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW  246 (318)
T ss_dssp             CSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             cceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence            34679999999999987655889999999999999999999999999999988888877766655543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=2.1e-16  Score=85.36  Aligned_cols=77  Identities=18%  Similarity=0.249  Sum_probs=61.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ..||+.|+|||++.... ++.++|+||+|+++|++++ |..||.+.+....+..+......+.+..+|....+.+...+
T Consensus       193 ~~~t~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  270 (299)
T d1jpaa_         193 GKIPIRWTAPEAIQYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCW  270 (299)
T ss_dssp             ---CGGGSCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccCCccccCHHHHhcCC-CCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHc
Confidence            35788999999998876 8999999999999999997 89999999998888888877776666666665555444443

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=9.5e-17  Score=87.47  Aligned_cols=75  Identities=20%  Similarity=0.425  Sum_probs=55.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh-cCCCCCCCcchhchhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT-LGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~p~~~~~~~~~~   81 (85)
                      +.+||+.|+|||++.+.. ++.++|+||+|+++|++++ |..||.+.+....+..+... ...+.    |...++++.++
T Consensus       225 ~~~gt~~y~aPE~l~~~~-~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~----p~~~~~~l~~l  299 (325)
T d1rjba_         225 NARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ----PFYATEEIYII  299 (325)
T ss_dssp             TEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCC----CTTCCHHHHHH
T ss_pred             cccCCCccCChHHHcCCC-CCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC----CCcCCHHHHHH
Confidence            456899999999998877 9999999999999999997 89999987766666555543 33333    33444555555


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      ++
T Consensus       300 i~  301 (325)
T d1rjba_         300 MQ  301 (325)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.3e-16  Score=84.15  Aligned_cols=75  Identities=23%  Similarity=0.290  Sum_probs=57.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLF   79 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~   79 (85)
                      ...||+.|+|||++.... ++.++|+||+|+++|++++ |.+||.+.+..+.+..+......+.+..+|....+.+.
T Consensus       168 ~~~gt~~y~apE~l~~~~-~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~  243 (273)
T d1mp8a_         168 KGKLPIKWMAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT  243 (273)
T ss_dssp             ---CCGGGCCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             ceecCcccchhhHhccCC-CCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence            456789999999998777 8999999999999999987 89999999988888888776555544455444433333

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=6.8e-16  Score=81.88  Aligned_cols=75  Identities=16%  Similarity=0.269  Sum_probs=60.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...||+.|+|||++.... ++.++|+||+|+++|++++ |..||.+.+..+...++..+.+.+.+..    .++++.+|+
T Consensus       160 ~~~~t~~y~aPE~~~~~~-~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~----~~~~l~~li  234 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL----ASEKVYTIM  234 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTT----CCHHHHHHH
T ss_pred             ccCCCCCcCCcHHhcCCC-CCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCccc----ccHHHHHHH
Confidence            356889999999998877 8999999999999999997 8999999998888888877665554444    445555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       235 ~  235 (258)
T d1k2pa_         235 Y  235 (258)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.7e-16  Score=84.44  Aligned_cols=73  Identities=18%  Similarity=0.171  Sum_probs=56.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      ..||+.|+|||++.+.. ++.++|+||+|+++|++++ |..||.+.+.......+..+...+.+..++....+.+
T Consensus       173 ~~gt~~y~APE~l~~~~-~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li  246 (317)
T d1xkka_         173 GKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIM  246 (317)
T ss_dssp             --CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHH
T ss_pred             cccCccccChHHHhcCC-CChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHH
Confidence            45899999999998877 9999999999999999998 8999998887777777766655555555554443333

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.5e-15  Score=81.81  Aligned_cols=69  Identities=43%  Similarity=0.976  Sum_probs=58.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ...+||+.|+|||++.....++.++|+||+|+++|++++|..||.+.+....+..+....+.+....++
T Consensus       160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  228 (298)
T d1gz8a_         160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP  228 (298)
T ss_dssp             TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcc
Confidence            356899999999998877656789999999999999999999999999988888887776666555444

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.9e-15  Score=80.21  Aligned_cols=74  Identities=15%  Similarity=0.263  Sum_probs=54.1

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...||+.|+|||++.+.. ++.++|+||+|+++|++++ |.+++.+.+....+..+..+...+.+..    .++++.+++
T Consensus       161 ~~~gt~~y~aPE~l~~~~-~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~----~~~~l~~li  235 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL----ASTHVYQIM  235 (263)
T ss_dssp             ----CTTSCCHHHHTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTT----SCHHHHHHH
T ss_pred             ceecCcccCChHHhcCCC-CCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccc----cCHHHHHHH
Confidence            356889999999998877 9999999999999999998 6778887787777777776655444433    344444444

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.7e-15  Score=80.75  Aligned_cols=73  Identities=16%  Similarity=0.293  Sum_probs=55.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVK   76 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~   76 (85)
                      +...||+.|+|||++.... ++.++|+||+|+++|++++ +.+++.+.+....+..+..+...+.+..+|....+
T Consensus       168 ~~~~gt~~y~APE~~~~~~-~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~  241 (272)
T d1qpca_         168 EGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQ  241 (272)
T ss_dssp             TTCCCCTTTSCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             cccCCcccccChHHHhCCC-CCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHH
Confidence            3467889999999998776 8999999999999999998 56677777777777777666555544444443333

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.1e-16  Score=84.19  Aligned_cols=79  Identities=16%  Similarity=0.196  Sum_probs=62.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      +.+||+.|++||.+.+.. ++.++|+||+|+++|++++|..||.+.+....+..|......++... ....+.++.+||+
T Consensus       162 ~~~~t~~y~ape~~~~~~-~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~  239 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA-FKEISIEAMDFVD  239 (321)
T ss_dssp             EEESCGGGSCHHHHTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHH-HTTSCHHHHHHHH
T ss_pred             ccccccccccchhccCCC-CCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhh-ccCCCHHHHHHHH
Confidence            457899999999988877 89999999999999999999999999999888888876543333222 2235566677765


Q ss_pred             c
Q psy13989         84 A   84 (85)
Q Consensus        84 ~   84 (85)
                      +
T Consensus       240 ~  240 (321)
T d1tkia_         240 R  240 (321)
T ss_dssp             T
T ss_pred             H
Confidence            3

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.3e-15  Score=80.03  Aligned_cols=75  Identities=17%  Similarity=0.267  Sum_probs=56.1

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ..||+.|+|||++.+.. ++.++|+||+|+++|++++ +.+++.+.+....+..+......+.+..+|....+.+..
T Consensus       173 ~~gt~~Y~APE~l~~~~-~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~  248 (283)
T d1mqba_         173 GKIPIRWTAPEAISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQ  248 (283)
T ss_dssp             -CCCGGGSCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHH
T ss_pred             CCCCccccCHHHHccCC-CCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHH
Confidence            45788999999998877 9999999999999999998 556676677777777776666656555555544444333

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.6e-16  Score=86.10  Aligned_cols=79  Identities=22%  Similarity=0.249  Sum_probs=52.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcC----CCCCCCcchhchhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG----TPSEDTWPTAGVKGL   78 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~p~~~~~~~   78 (85)
                      ...+||+.|+|||++.+.. |+.++|+||+|+++|++++|..||.+.+.......+.....    ..+.+. ....++++
T Consensus       171 ~~~~gt~~y~aPE~~~~~~-y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~  248 (335)
T d2ozaa1         171 TTPCYTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE-WSEVSEEV  248 (335)
T ss_dssp             CCCSCCCSSCCCCCCCGGG-GSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTH-HHHSCHHH
T ss_pred             ccccCCcccCCcHHHcCCC-CCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcc-cccCCHHH
Confidence            4568999999999998776 99999999999999999999999988765544443332211    111111 22455666


Q ss_pred             hhhhh
Q psy13989         79 FSLIR   83 (85)
Q Consensus        79 ~~~~~   83 (85)
                      .+||+
T Consensus       249 ~~li~  253 (335)
T d2ozaa1         249 KMLIR  253 (335)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66664

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=4.6e-16  Score=83.01  Aligned_cols=48  Identities=13%  Similarity=0.250  Sum_probs=41.7

Q ss_pred             CCCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCC
Q psy13989          2 QNWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE   49 (85)
Q Consensus         2 ~~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~   49 (85)
                      .++.+||+.|+|||++.+...++.++|+||+|+++|++++|..||.+.
T Consensus       166 ~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  213 (273)
T d1xwsa_         166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  213 (273)
T ss_dssp             BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc
Confidence            356789999999999987764567789999999999999999999753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.59  E-value=4.3e-15  Score=79.55  Aligned_cols=68  Identities=44%  Similarity=0.946  Sum_probs=56.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP   71 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p   71 (85)
                      ..+|++.|++||++.+...++.++|+||+|++++++++|..||.+.+..+++.++....+.+....++
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  226 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP  226 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhcc
Confidence            45688999999999876658899999999999999999999999999988888888777766655554

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.4e-15  Score=81.00  Aligned_cols=76  Identities=20%  Similarity=0.349  Sum_probs=53.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHc-CCCCCCCChHHHHHHH-HhhcCCCCCCCcchhchhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLTRI-FQTLGTPSEDTWPTAGVKGLFS   80 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~-~~~~~~~~~~~~~~~i-~~~~~~~~~~~~p~~~~~~~~~   80 (85)
                      ++.+||+.|+|||++.+.. ++.++|+||+|+++|+++++ .+||.+......+..+ ..+...+    .|...++++.+
T Consensus       194 ~~~~gt~~y~APE~l~~~~-~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~  268 (299)
T d1ywna1         194 GDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR----APDYTTPEMYQ  268 (299)
T ss_dssp             TSCCCGGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCC----CCTTCCHHHHH
T ss_pred             CceeeCccccchhHhhcCC-CCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC----CCccCCHHHHH
Confidence            4567999999999998877 89999999999999999985 5688876654444443 3333332    33344445555


Q ss_pred             hhh
Q psy13989         81 LIR   83 (85)
Q Consensus        81 ~~~   83 (85)
                      ++.
T Consensus       269 li~  271 (299)
T d1ywna1         269 TML  271 (299)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=4.3e-15  Score=80.14  Aligned_cols=76  Identities=20%  Similarity=0.290  Sum_probs=57.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHc-CCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      ++.+||+.|+|||.+.+.. ++.++|+||+|+++|+++++ .+||.+.++.+....+......+.+    ...+.++.++
T Consensus       200 ~~~~~~~~y~aPE~~~~~~-~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p----~~~~~~~~~l  274 (301)
T d1lufa_         200 GNDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACP----ENCPLELYNL  274 (301)
T ss_dssp             --CCBCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHH
T ss_pred             CCCCcCcCcCCHHHHccCC-CChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC----ccchHHHHHH
Confidence            3567889999999998877 99999999999999999987 4789999988888887665443333    3344455555


Q ss_pred             hh
Q psy13989         82 IR   83 (85)
Q Consensus        82 ~~   83 (85)
                      ++
T Consensus       275 i~  276 (301)
T d1lufa_         275 MR  276 (301)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.58  E-value=1e-14  Score=78.00  Aligned_cols=80  Identities=20%  Similarity=0.221  Sum_probs=60.6

Q ss_pred             CCccccccccCchhhhc-----cccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhh
Q psy13989          3 NWKKVRKAFMAPELLFG-----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~-----~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~   77 (85)
                      +..+||+.|++||++.+     ...++.++|+|++|++++++++|..||.+.++......+......++.+. ....+++
T Consensus       167 ~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~  245 (277)
T d1phka_         167 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE-WDDYSDT  245 (277)
T ss_dssp             CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT-GGGSCHH
T ss_pred             eeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcc-cccCCHH
Confidence            45679999999999863     22367889999999999999999999999998888888876543333332 2345566


Q ss_pred             hhhhhh
Q psy13989         78 LFSLIR   83 (85)
Q Consensus        78 ~~~~~~   83 (85)
                      +.+|++
T Consensus       246 ~~~li~  251 (277)
T d1phka_         246 VKDLVS  251 (277)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666664

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.6e-15  Score=82.42  Aligned_cols=63  Identities=46%  Similarity=0.890  Sum_probs=54.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      .+.+||+.|+|||++.+...++.++|+||+|++++++++|..||.+.+..+.+..+...++.+
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~  242 (350)
T d1q5ka_         180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP  242 (350)
T ss_dssp             CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             ccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            456899999999998776558999999999999999999999999999888888887655544

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=7.6e-15  Score=79.13  Aligned_cols=75  Identities=20%  Similarity=0.376  Sum_probs=57.3

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ..+||+.|+|||.+.+.. ++.++|+||+|+++|++++ |.+||.+.+.......+..+...+.+..+    ++++.+++
T Consensus       196 ~~~~~~~y~aPE~l~~~~-y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~----~~~l~~li  270 (299)
T d1fgka_         196 NGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC----TNELYMMM  270 (299)
T ss_dssp             TSCCGGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSC----CHHHHHHH
T ss_pred             cCCCChhhhhhhHhcCCC-CCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccc----hHHHHHHH
Confidence            357889999999998876 9999999999999999997 78999988887777666665544444444    44444444


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       271 ~  271 (299)
T d1fgka_         271 R  271 (299)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6e-15  Score=80.75  Aligned_cols=64  Identities=33%  Similarity=0.660  Sum_probs=54.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      +..+||+.|+|||++.+...++.++|+||+|++++++++|..||.+.+....+..+....+.++
T Consensus       176 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  239 (346)
T d1cm8a_         176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP  239 (346)
T ss_dssp             CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCc
Confidence            4578999999999998765578899999999999999999999999988888777766555443

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.5e-15  Score=79.62  Aligned_cols=57  Identities=25%  Similarity=0.321  Sum_probs=48.5

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT   61 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~   61 (85)
                      ...|+..|+|||++.+.. ++..+|+||+|+++|++++ |..||.+.+..+....+...
T Consensus       173 ~~~~~~~~~aPE~~~~~~-~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~  230 (273)
T d1u46a_         173 HRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE  230 (273)
T ss_dssp             ---CCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS
T ss_pred             ccccCcccCCHHHHhCCC-CCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhC
Confidence            345777899999998876 8999999999999999997 89999999999988887654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.56  E-value=1e-15  Score=82.37  Aligned_cols=50  Identities=10%  Similarity=0.031  Sum_probs=42.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHH
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLD   53 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~   53 (85)
                      ++.+||+.|+|||++.+.. ++.++|+||+|++++++++|..||.+.....
T Consensus       171 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~  220 (299)
T d1ckia_         171 KNLTGTARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAAT  220 (299)
T ss_dssp             CSCCCCSSSCCHHHHTTBC-CCHHHHHHHHHHHHHHHHHSSCTTCCCC---
T ss_pred             CCcCCCccccCHHHHhCCC-CCChhhEEecCHHHHHHHhCCCcccccchHH
Confidence            4568999999999998877 8999999999999999999999998765443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.56  E-value=2e-15  Score=81.21  Aligned_cols=47  Identities=15%  Similarity=0.077  Sum_probs=42.3

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      .+++||+.|+|||++.+.. ++.++|+||+|+++|++++|..||.+..
T Consensus       171 ~~~~GT~~y~aPE~~~~~~-~~~~~DiwSlG~~l~elltg~~Pf~~~~  217 (293)
T d1csna_         171 KNLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLK  217 (293)
T ss_dssp             CCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             CceEEchhhcCHHHhcCCC-CChHHHHHHhhHHHHHHHhCCCcCCCcc
Confidence            3568999999999998876 9999999999999999999999997654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.4e-14  Score=77.75  Aligned_cols=74  Identities=20%  Similarity=0.315  Sum_probs=55.2

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      ...||+.|+|||++.... ++.++|+||+|+++|++++ +.+++.+....+.+..+......+.+..+++...+.+
T Consensus       173 ~~~gt~~y~aPE~~~~~~-~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li  247 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM  247 (285)
T ss_dssp             ---CCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred             cccccccccChHHHhCCC-CCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHH
Confidence            356889999999998877 8999999999999999998 5667777778778877776655555555554443333

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=5.3e-15  Score=81.30  Aligned_cols=62  Identities=34%  Similarity=0.752  Sum_probs=50.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP   65 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   65 (85)
                      +..+||+.|+|||++.+.. ++.++|+||+||+++++++|..||.+.+......++......+
T Consensus       176 ~~~~~t~~y~aPE~l~~~~-~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~  237 (355)
T d2b1pa1         176 TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP  237 (355)
T ss_dssp             -----CCTTCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             ccccccccccChhhhcCCC-CCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCC
Confidence            4567999999999998876 8899999999999999999999999999888888777655544

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=1.9e-14  Score=77.23  Aligned_cols=74  Identities=19%  Similarity=0.315  Sum_probs=52.0

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcC-CCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhhh
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKA-PFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLIR   83 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~   83 (85)
                      ..|++.|+|||++.+.. ++.++|+||+|+++|+++++. +++.+.+.......+......+.+..    .++++.++++
T Consensus       176 ~~g~~~y~aPE~~~~~~-~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~l~~li~  250 (287)
T d1opja_         176 AKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG----CPEKVYELMR  250 (287)
T ss_dssp             EEECGGGCCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTT----CCHHHHHHHH
T ss_pred             ccccccccChHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCcc----chHHHHHHHH
Confidence            35788999999998877 999999999999999999854 55556666665555555544433333    4444555443

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=9.3e-15  Score=77.62  Aligned_cols=75  Identities=17%  Similarity=0.302  Sum_probs=56.0

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...++..|+|||++.+.. ++.++|+||+|+++|++++ |.+||.+.+.......+......+.+.    ..++++.+++
T Consensus       159 ~~~~~~~y~aPE~l~~~~-~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~li  233 (262)
T d1byga_         159 TGKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD----GCPPAVYEVM  233 (262)
T ss_dssp             ---CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCT----TCCHHHHHHH
T ss_pred             cccccccCCChHHHhCCC-CChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCc----cCCHHHHHHH
Confidence            456788999999998776 8999999999999999997 788998888877777776654444333    4445555555


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       234 ~  234 (262)
T d1byga_         234 K  234 (262)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.9e-14  Score=77.82  Aligned_cols=75  Identities=17%  Similarity=0.236  Sum_probs=55.9

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHc-CCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhhh
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSLI   82 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~   82 (85)
                      ...||..|+|||.+.... ++.++|+||+|+++|++++| .+||.+.+..+.+..+..+...+.+..+    ++++.++|
T Consensus       185 ~~~gt~~y~aPE~l~~~~-~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~li  259 (309)
T d1fvra_         185 MGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC----DDEVYDLM  259 (309)
T ss_dssp             ---CCTTTCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTB----CHHHHHHH
T ss_pred             ceecCCcccchHHhccCC-CCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccC----CHHHHHHH
Confidence            456889999999998877 89999999999999999985 5689988888888877665544444444    44455544


Q ss_pred             h
Q psy13989         83 R   83 (85)
Q Consensus        83 ~   83 (85)
                      +
T Consensus       260 ~  260 (309)
T d1fvra_         260 R  260 (309)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=7.5e-14  Score=75.48  Aligned_cols=75  Identities=17%  Similarity=0.200  Sum_probs=58.8

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHc-CCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGL   78 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~   78 (85)
                      +..+||+.|++||.+.+.. ++.+.|+||+|+++|+++++ .+||.+.+..+.+..+..+...+.+..+|......+
T Consensus       193 ~~~~~t~~y~aPe~l~~~~-~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li  268 (308)
T d1p4oa_         193 GKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELM  268 (308)
T ss_dssp             GSSEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             cceecccccCCHHHHccCC-CCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHH
Confidence            3457899999999998877 88999999999999999987 588999999888888877655554555554443333

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.7e-14  Score=76.79  Aligned_cols=74  Identities=20%  Similarity=0.343  Sum_probs=53.5

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHH-cCCCCCCCChHHHHHHHH-hhcCCCCCCCcchhchhh
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF-QTLGTPSEDTWPTAGVKG   77 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~p~~~~~~   77 (85)
                      +..+||+.|+|||++.... ++.++|+||+|+++|++++ |.+++.+.+....+..+. .......+..+|....+.
T Consensus       205 ~~~~gt~~y~aPE~~~~~~-~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~L  280 (311)
T d1t46a_         205 GNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDI  280 (311)
T ss_dssp             SSSEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHH
T ss_pred             eecccChHHcCHHHhcCCC-CCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHH
Confidence            4567899999999998776 8999999999999999997 777887777666655554 344333333344433333

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.1e-14  Score=79.21  Aligned_cols=81  Identities=20%  Similarity=0.268  Sum_probs=56.0

Q ss_pred             CCccccccccCchhhhccc-cCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCCCCCcchhchhhhhhh
Q psy13989          3 NWKKVRKAFMAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWPTAGVKGLFSL   81 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~-~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~   81 (85)
                      .+..|++.|++||.+.+.. .++.++|+||+|+++|++++|..||.+.+.......+......+ ....|...+.++.+|
T Consensus       188 ~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~l  266 (322)
T d1vzoa_         188 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDL  266 (322)
T ss_dssp             CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHH
T ss_pred             cccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC-CCCCcccCCHHHHHH
Confidence            3567899999999987543 36778999999999999999999998876555544444322112 222345566777776


Q ss_pred             hhc
Q psy13989         82 IRA   84 (85)
Q Consensus        82 ~~~   84 (85)
                      |++
T Consensus       267 i~~  269 (322)
T d1vzoa_         267 IQR  269 (322)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.2e-14  Score=77.79  Aligned_cols=64  Identities=34%  Similarity=0.702  Sum_probs=54.4

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS   66 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   66 (85)
                      .+.+||+.|+|||+..+...++.++|+||+|++++++++|..||.+.+.......+....+.++
T Consensus       176 ~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~  239 (348)
T d2gfsa1         176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG  239 (348)
T ss_dssp             SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            3567899999999987766578899999999999999999999999998888888876655443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.4e-13  Score=73.81  Aligned_cols=62  Identities=37%  Similarity=0.763  Sum_probs=51.2

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT   64 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   64 (85)
                      ...+||+.|+|||++.....++.++|+||+|++++++++|..||.+.+..+....+......
T Consensus       170 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~  231 (345)
T d1pmea_         170 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS  231 (345)
T ss_dssp             CCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCS
T ss_pred             ccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccC
Confidence            45679999999999866555889999999999999999999999998887777666554333

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=4e-13  Score=72.75  Aligned_cols=69  Identities=19%  Similarity=0.258  Sum_probs=46.8

Q ss_pred             ccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCC-CChHHHHHHHHhhcCCCCCCCcchhc
Q psy13989          5 KKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG-ESDLDQLTRIFQTLGTPSEDTWPTAG   74 (85)
Q Consensus         5 ~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~p~~~   74 (85)
                      ..||+.|+|||++.... ++.++|+||+|+++|+++++..||.. .+..+....+..+...+.+..++...
T Consensus       194 ~~gt~~y~aPE~~~~~~-~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l  263 (311)
T d1r0pa_         194 AKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL  263 (311)
T ss_dssp             SSCCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHH
T ss_pred             ccccccccChHHHhcCC-CCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHH
Confidence            46889999999988777 89999999999999999986655544 44445555565554444444444333

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=1.8e-12  Score=70.99  Aligned_cols=47  Identities=28%  Similarity=0.661  Sum_probs=39.6

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      ...+||+.|+|||++.... ++.++|+||+|++++++++|..||.+..
T Consensus       187 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~~g~~pF~~~~  233 (362)
T d1q8ya_         187 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDE  233 (362)
T ss_dssp             CSCCSCGGGCCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             ccccccccccChhhccccC-CCccccccchHHHHHHHHHCCCCCCCCc
Confidence            4567999999999998877 8899999999999999999999997653

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=7.6e-12  Score=66.78  Aligned_cols=67  Identities=45%  Similarity=0.870  Sum_probs=50.7

Q ss_pred             CccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCC-CCCCChHHHHHHHHhhcCCCCCCCc
Q psy13989          4 WKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPF-LPGESDLDQLTRIFQTLGTPSEDTW   70 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~   70 (85)
                      ...+++.|.+||++.....++.++|+||+|++++++++|..| |.+.+....+.++....+.+....+
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (292)
T d1unla_         160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW  227 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTC
T ss_pred             eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhh
Confidence            345678899999988766578899999999999999998776 5566667777777666555544433

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.29  E-value=7.2e-12  Score=68.00  Aligned_cols=48  Identities=27%  Similarity=0.648  Sum_probs=41.7

Q ss_pred             CCccccccccCchhhhccccCCchhHHHhHHHHHHHHHHcCCCCCCCC
Q psy13989          3 NWKKVRKAFMAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES   50 (85)
Q Consensus         3 ~~~~gt~~~~ape~~~~~~~~~~~~~~ws~g~~~~~~~~~~~~~~~~~   50 (85)
                      +..+||+.|+|||++.+...++.++|+|++|++++++++|..||....
T Consensus       187 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~  234 (328)
T d3bqca1         187 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH  234 (328)
T ss_dssp             CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             cccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCc
Confidence            456789999999998876658899999999999999999999986654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.4e-11  Score=64.43  Aligned_cols=43  Identities=23%  Similarity=0.284  Sum_probs=34.7

Q ss_pred             CccccccccCchhhhccc-----cCCchhHHHhHHHHHHHHHHcCCCC
Q psy13989          4 WKKVRKAFMAPELLFGAR-----MYGVGIDMWAVGCIICELLLKAPFL   46 (85)
Q Consensus         4 ~~~gt~~~~ape~~~~~~-----~~~~~~~~ws~g~~~~~~~~~~~~~   46 (85)
                      ..+||+.|+|||++.+..     .++.++|+||+|+++|++++|..|+
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~  218 (303)
T d1vjya_         171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             -CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             ceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCC
Confidence            467999999999986532     1566889999999999999987665